mRNA_F-serratus_M_contig8160.19577.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig8160.19577.1 vs. uniprot
Match: D8LBM5_ECTSI (Similar to 20S proteasome alpha5 subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBM5_ECTSI) HSP 1 Score: 323 bits (828), Expect = 1.300e-106 Identity = 172/234 (73.50%), Postives = 196/234 (83.76%), Query Frame = 2
Query: 50 SPDGSIYQIEYAIQAADKGGLTIGVQTDQGLVLAAQGRRRSPLLKSSSVFKINDID-ACISCAMSGLLPDGRMLVDYARTWVQEHRFEFDEAPSVEAVASHLSQLALKFQ-WLRQRRKPRSSKEEADGG--AMARPVGVALLMAGVDRGNRPVLYHLDPSGAYMQWRAKAIGEKGAAAEAMLEKCGPYGKMTVRRAMVVVLQVLKEVLGD-EFCEDRLEMVCVDLSEGDTDLGE 736
SPDGSIYQ+EYA++AADKGGLTIGVQTD+GLVLAA GRRRSPLLK+SSV KI D+D + CAMSGLLPDGR+L+DYARTWVQEHRFEFDEAPSVEAVAS LS+LALKF + + + +EE DGG AM+RPVGVALLMAGVDRG+RPVLYHLDPSGAY+QWRA+AIG+KGAAAEA LE GP+ M+VRRAM VL VL+EVLGD EF DRLEMVCVD+ G G+
Sbjct: 44 SPDGSIYQVEYAVEAADKGGLTIGVQTDKGLVLAAHGRRRSPLLKASSVSKIADVDDGRMCCAMSGLLPDGRLLLDYARTWVQEHRFEFDEAPSVEAVASQLSRLALKFNGYDKDGKAGNGGREEEDGGGPAMSRPVGVALLMAGVDRGDRPVLYHLDPSGAYVQWRARAIGDKGAAAEAKLEGVGPFEGMSVRRAMAAVLGVLREVLGDDEFSTDRLEMVCVDMMGGGRGSGD 277
BLAST of mRNA_F-serratus_M_contig8160.19577.1 vs. uniprot
Match: A0A1D1XX99_9ARAE (Proteasome subunit alpha type (Fragment) n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1XX99_9ARAE) HSP 1 Score: 172 bits (435), Expect = 1.330e-49 Identity = 97/219 (44.29%), Postives = 135/219 (61.64%), Query Frame = 2
Query: 50 SPDGSIYQIEYAIQAADKGGLTIGVQTDQGLVLAAQGRRRSPLLKSSSVFKINDIDACISCAMSGLLPDGRMLVDYARTWVQEHRFEFDEAPSVEAVASHLSQLALKFQWLRQRRKPRSSKEEADGGAMARPVGVALLMAGVDRGNRPVLYHLDPSGAYMQWRAKAIGEKGAAAEAMLEKCGPYGK-MTVRRAMVVVLQVLKEVLGDEFCEDRLEMVCV 703
SP+G ++Q+EYAI+A G +G+QT +G+VLAA+ R SPLL SSS+ KI +ID + CAMSGL D R ++D+AR Q HRF +DEA VE+V + LAL+F E + M+RP GVALL+AGVD N P L+H DPSG + Q+ AKAIG A+ LE G Y K +T+ +A + L+VLK+V+ ++ +E+ V
Sbjct: 21 SPEGRLFQVEYAIEAIKLGSTAVGIQTSEGVVLAAEKRVTSPLLVSSSIEKIMEIDKHLGCAMSGLTADSRTMIDHARVAAQSHRFTYDEAIKVESVTQAVCDLALRF----------GESAEGEESIMSRPFGVALLIAGVDE-NGPQLFHADPSGTFTQFDAKAIGSGSEGAQTELE--GEYHKSITLEKAETLSLRVLKQVMEEKLNNTNVELASV 226
BLAST of mRNA_F-serratus_M_contig8160.19577.1 vs. uniprot
Match: UPI001C7A0D83 (proteasome component pup2 n=1 Tax=Marasmius oreades TaxID=181124 RepID=UPI001C7A0D83) HSP 1 Score: 171 bits (434), Expect = 1.630e-49 Identity = 91/223 (40.81%), Postives = 142/223 (63.68%), Query Frame = 2
Query: 50 SPDGSIYQIEYAIQAADKGGLTIGVQTDQGLVLAAQGRRRSPLLKSSSVFKINDIDACISCAMSGLLPDGRMLVDYARTWVQEHRFEFDEAPSVEAVASHLSQLALKFQWLRQRRKPRSSKEEADGGAMARPVGVALLMAGVDRGNRPVLYHLDPSGAYMQWRAKAIGEKGAAAEAMLEKCGPYGKMTVRRAMVVVLQVLKEVLGDEFCEDRLEMVCVDLSEG 718
SP+G ++Q+EYAI+A G T+G++TDQG+VLA + R +SPL++SSS+ KI +ID + CAMSGL D R ++D+AR Q H F +DE VE+V + LAL+F + M+RP GVALL+AG+D P LYH DPSG +++++AKAIG AA+A L++ Y +MT++ A ++ ++VLK+V+ ++ + +++ V +G
Sbjct: 16 SPEGRLFQVEYAIEAIKLGSTTLGIRTDQGVVLAVEKRVQSPLIESSSIEKIMEIDRHLGCAMSGLTADARTMIDHARVTAQNHSFTYDEKIKVESVTQAVCDLALRF----------GESVHDEDAMMSRPFGVALLIAGIDEVG-PQLYHTDPSGTFVRYQAKAIGSGSEAAQAELQEKW-YSQMTLQEANILAMRVLKQVMEEKLDQHNVQLAQVTPQKG 226
BLAST of mRNA_F-serratus_M_contig8160.19577.1 vs. uniprot
Match: A0A1Q3E886_LENED (Proteasome subunit alpha type n=4 Tax=Omphalotaceae TaxID=72117 RepID=A0A1Q3E886_LENED) HSP 1 Score: 171 bits (434), Expect = 3.060e-49 Identity = 92/223 (41.26%), Postives = 140/223 (62.78%), Query Frame = 2
Query: 50 SPDGSIYQIEYAIQAADKGGLTIGVQTDQGLVLAAQGRRRSPLLKSSSVFKINDIDACISCAMSGLLPDGRMLVDYARTWVQEHRFEFDEAPSVEAVASHLSQLALKFQWLRQRRKPRSSKEEADGGAMARPVGVALLMAGVDRGNRPVLYHLDPSGAYMQWRAKAIGEKGAAAEAMLEKCGPYGKMTVRRAMVVVLQVLKEVLGDEFCEDRLEMVCVDLSEG 718
SP+G ++Q+EYAI+A G T+GV+TD+G+VL + R +SPL++SSS+ KI +IDA + CAMSGL D R ++D+AR Q H F +DE VE+V + LAL+F + M+RP GVALL+AG+D P LYH DPSG +++++AKAIG AA+A L+ + KMT+R A ++ L++LK+V+ ++ +++ V + G
Sbjct: 16 SPEGRLFQVEYAIEAIKLGSTTVGVRTDEGVVLGVEKRVQSPLIESSSIEKIMEIDAHLGCAMSGLTADARTMIDHARVTAQNHSFTYDEKIKVESVTQAVCDLALRF----------GESVHDEDAMMSRPFGVALLIAGIDELG-PQLYHTDPSGTFVRYQAKAIGSGSEAAQAELQDKW-HSKMTLREAQLLTLRILKQVMEEKLDRHNVQLAQVTKANG 226
BLAST of mRNA_F-serratus_M_contig8160.19577.1 vs. uniprot
Match: F6Z491_CIOIN (Proteasome subunit alpha type n=3 Tax=Ciona TaxID=7718 RepID=F6Z491_CIOIN) HSP 1 Score: 171 bits (432), Expect = 3.250e-49 Identity = 90/218 (41.28%), Postives = 133/218 (61.01%), Query Frame = 2
Query: 50 SPDGSIYQIEYAIQAADKGGLTIGVQTDQGLVLAAQGRRRSPLLKSSSVFKINDIDACISCAMSGLLPDGRMLVDYARTWVQEHRFEFDEAPSVEAVASHLSQLALKFQWLRQRRKPRSSKEEADGGAMARPVGVALLMAGVDRGNRPVLYHLDPSGAYMQWRAKAIGEKGAAAEAMLEKCGPYGKMTVRRAMVVVLQVLKEVLGDEFCEDRLEMVCV 703
SP+G ++Q+EYAI+A G IG+QT G+VLA + R SPL+++SS+ K+ +ID + CAMSGL+ D + ++D AR Q H F FDE V+++ +S LAL+F +E+++ GAM+RP GVALL AG D G P LYHLDPSG ++ AKAIG A+ LE+ + MT+ A +L +LK+V+ ++ +E+ V
Sbjct: 16 SPEGRLFQVEYAIEAIKLGSTAIGIQTADGVVLAVEKRITSPLIEASSIEKVFEIDTHVGCAMSGLIADSKTMIDRARVEAQNHWFTFDEKMRVQSITKAVSNLALQF-----------GEEDSEPGAMSRPFGVALLFAGYDEGLGPQLYHLDPSGTFVSCSAKAIGSASEGAQTSLEEQF-HKSMTIEEAQKSILTILKQVMEEKLTSTNVEVATV 221
BLAST of mRNA_F-serratus_M_contig8160.19577.1 vs. uniprot
Match: A0A1Y2BW89_9BASI (Proteasome subunit alpha type (Fragment) n=1 Tax=Leucosporidium creatinivorum TaxID=106004 RepID=A0A1Y2BW89_9BASI) HSP 1 Score: 171 bits (432), Expect = 3.450e-49 Identity = 96/219 (43.84%), Postives = 139/219 (63.47%), Query Frame = 2
Query: 50 SPDGSIYQIEYAIQAADKGGLTIGVQTDQGLVLAAQGRRRSPLLKSSSVFKINDIDACISCAMSGLLPDGRMLVDYARTWVQEHRFEFDEAPSVEAVASHLSQLALKFQWLRQRRKPRSSKEEADGGAMARPVGVALLMAGVDRGNRPVLYHLDPSGAYMQWRAKAIGEKGAAAEAMLEKCGPYGK-MTVRRAMVVVLQVLKEVLGDEFCEDRLEMVCV 703
SP+G ++Q+EYAI+A G T+G+QT QG+VLA + R +SPLL S SV KI +ID+ ++CAMSGL D R +V++AR Q H F +DE VE+V + LAL+F + +EEA +M+RP GVALL+AG D+ P LYH DPSG +M++ AKAIG A+ L+ Y K MT+ A V+ L+VLK+V+ ++ + +++ V
Sbjct: 15 SPEGRLFQVEYAIEAIKLGSTTVGIQTSQGVVLAVEKRTQSPLLDSDSVEKIMEIDSHVACAMSGLTADARTMVEHARVTSQNHSFTYDEPIKVESVTQAVCDLALRF-------GEGADEEEA---SMSRPFGVALLIAGYDQSGGPQLYHADPSGTFMRYDAKAIGSGSEGAQNELQDS--YNKSMTLEEAQVLALKVLKQVMEEKLDHNNVQLAQV 221
BLAST of mRNA_F-serratus_M_contig8160.19577.1 vs. uniprot
Match: E9HGR7_DAPPU (Proteasome subunit alpha type n=8 Tax=Mandibulata TaxID=197563 RepID=E9HGR7_DAPPU) HSP 1 Score: 170 bits (431), Expect = 4.600e-49 Identity = 93/219 (42.47%), Postives = 136/219 (62.10%), Query Frame = 2
Query: 50 SPDGSIYQIEYAIQAADKGGLTIGVQTDQGLVLAAQGRRRSPLLKSSSVFKINDIDACISCAMSGLLPDGRMLVDYARTWVQEHRFEFDEAPSVEAVASHLSQLALKFQWLRQRRKPRSSKEEADGGAMARPVGVALLMAGVDRGNRPVLYHLDPSGAYMQWRAKAIGEKGAAAEAMLEKCGPYGK-MTVRRAMVVVLQVLKEVLGDEFCEDRLEMVCV 703
SP+G ++Q+EYAI+A G IG+QT +G+VLA + R SPL++ +++ KI +ID I CA+SGL+ D R +VD AR Q H F +DE SVE+VA +S LA++F + DG AM+RP GVA+L AG+D P L+H+DPSG Y+Q+ AKAIG A+ L++ Y K MT++ AM L +LK+V+ ++ +E+ V
Sbjct: 16 SPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVVLAVEKRITSPLMEPTTIEKIVEIDKHIGCAVSGLMADSRTMVDRARVEAQNHWFTYDEKMSVESVAQAVSNLAIQF-----------GDSDDDGNAMSRPFGVAILFAGIDE-KGPQLFHMDPSGTYVQYDAKAIGSGSEGAQQSLQEA--YNKSMTLKSAMKAALTILKQVMEEKLSSTNVEVAAV 220
BLAST of mRNA_F-serratus_M_contig8160.19577.1 vs. uniprot
Match: A0A7M7ST72_STRPU (Proteasome subunit alpha type n=2 Tax=Echinacea TaxID=7674 RepID=A0A7M7ST72_STRPU) HSP 1 Score: 170 bits (430), Expect = 6.310e-49 Identity = 90/218 (41.28%), Postives = 140/218 (64.22%), Query Frame = 2
Query: 50 SPDGSIYQIEYAIQAADKGGLTIGVQTDQGLVLAAQGRRRSPLLKSSSVFKINDIDACISCAMSGLLPDGRMLVDYARTWVQEHRFEFDEAPSVEAVASHLSQLALKFQWLRQRRKPRSSKEEADGGAMARPVGVALLMAGVDRGNRPVLYHLDPSGAYMQWRAKAIGEKGAAAEAMLEKCGPYGKMTVRRAMVVVLQVLKEVLGDEFCEDRLEMVCV 703
SP+G ++Q+EYAI+A G IG++T++G+VLA + R SPL++++S+ KI +ID+ I CAMSGL+ D R ++D AR Q H F ++E SVE+V +S LAL+F +EA GAM+RP GVALL AG+D+ P+LYH+DPSG ++Q+ AKAIG A++ L++ + +T++ A L VLK+V+ ++ +E+ +
Sbjct: 16 SPEGRLFQVEYAIEAIKLGSTAIGIRTNEGIVLAVEKRVTSPLMEATSIEKIVEIDSHIGCAMSGLIADSRTMIDRARVEAQSHWFTYNEKMSVESVTQAVSNLALQF-----------GDDEAGSGAMSRPFGVALLFAGIDQ-KGPILYHMDPSGTFLQFDAKAIGSGSEGAQSQLQEVF-HKSLTLKEACKESLVVLKQVMEEKLSSTNVEVATI 220
BLAST of mRNA_F-serratus_M_contig8160.19577.1 vs. uniprot
Match: A0A8B7YRJ8_ACAPL (Proteasome subunit alpha type n=3 Tax=Asteroidea TaxID=7588 RepID=A0A8B7YRJ8_ACAPL) HSP 1 Score: 169 bits (429), Expect = 8.920e-49 Identity = 92/219 (42.01%), Postives = 137/219 (62.56%), Query Frame = 2
Query: 50 SPDGSIYQIEYAIQAADKGGLTIGVQTDQGLVLAAQGRRRSPLLKSSSVFKINDIDACISCAMSGLLPDGRMLVDYARTWVQEHRFEFDEAPSVEAVASHLSQLALKFQWLRQRRKPRSSKEEADGGAMARPVGVALLMAGVDRGNRPVLYHLDPSGAYMQWRAKAIGEKGAAAEAMLEKCGPYGK-MTVRRAMVVVLQVLKEVLGDEFCEDRLEMVCV 703
SP+G ++Q+EYAI+A G +G+QT +G VLA + R SPL++S+S+ KI +ID+ I CAMSGL+ D R ++D AR Q H F ++E S+EAV + LA++F ++AD GAM+RP GVALL AG+D P L+H+DPSG Y+Q+ AKAIG A++ L++ Y K MT++ A L +LK+V+ ++ +E+ V
Sbjct: 16 SPEGRLFQVEYAIEAIKLGSTALGIQTSEGCVLAVEKRVTSPLMESTSIEKIVEIDSHIGCAMSGLIADSRTMIDRARVEAQSHWFTYNEKMSIEAVTQAVCNLAMQF-----------GDDDADSGAMSRPFGVALLFAGMDE-EGPRLFHMDPSGTYIQYEAKAIGSGSEGAQSQLQET--YHKSMTLKEACKEALVILKQVMEEKLSSTNVELATV 220
BLAST of mRNA_F-serratus_M_contig8160.19577.1 vs. uniprot
Match: A0A7J7JUL7_BUGNE (Proteasome subunit alpha type n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7JUL7_BUGNE) HSP 1 Score: 169 bits (429), Expect = 8.920e-49 Identity = 91/223 (40.81%), Postives = 139/223 (62.33%), Query Frame = 2
Query: 50 SPDGSIYQIEYAIQAADKGGLTIGVQTDQGLVLAAQGRRRSPLLKSSSVFKINDIDACISCAMSGLLPDGRMLVDYARTWVQEHRFEFDEAPSVEAVASHLSQLALKFQWLRQRRKPRSSKEEADGGAMARPVGVALLMAGVDRGNRPVLYHLDPSGAYMQWRAKAIGEKGAAAEAMLEKCGPYGKMTVRRAMVVVLQVLKEVLGDEFCEDRLEMVCVDLSEG 718
SP+G ++Q+EYAI+A G IG+QT +G+VLA + R SPL+++ S+ KI ++D+ + CAMSGL+ D R L+D AR Q H F +DE SVE+V +S LAL F ++A+ GAM+RP GVALL AG+D N P L+HLDPSG ++++ AKAIG A+ L+ + M + A+ V+++LK+V+ ++ +E+ V ++G
Sbjct: 16 SPEGRLFQVEYAIEAIKLGSTAIGLQTSEGVVLAVEKRVTSPLIEADSIEKIFEVDSHLGCAMSGLIADSRTLIDRARVEAQNHWFTYDEKMSVESVTQSVSNLALAF-----------GDDDAEPGAMSRPFGVALLFAGIDE-NGPQLFHLDPSGTFIRYDAKAIGSASEGAQQSLQDVF-HKSMNLETAIKEVMKILKQVMEEKLTSKNVELAIVTKADG 225 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig8160.19577.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig8160.19577.1 >prot_F-serratus_M_contig8160.19577.1 ID=prot_F-serratus_M_contig8160.19577.1|Name=mRNA_F-serratus_M_contig8160.19577.1|organism=Fucus serratus male|type=polypeptide|length=167bp MSGLLPDGRMLVDYARTWVQEHRFEFDEAPSVEAVASHLSQLALKFQWLRback to top mRNA from alignment at F-serratus_M_contig8160:5780..9797- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig8160.19577.1 ID=mRNA_F-serratus_M_contig8160.19577.1|Name=mRNA_F-serratus_M_contig8160.19577.1|organism=Fucus serratus male|type=mRNA|length=4018bp|location=Sequence derived from alignment at F-serratus_M_contig8160:5780..9797- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig8160:5780..9797- >mRNA_F-serratus_M_contig8160.19577.1 ID=mRNA_F-serratus_M_contig8160.19577.1|Name=mRNA_F-serratus_M_contig8160.19577.1|organism=Fucus serratus male|type=CDS|length=1002bp|location=Sequence derived from alignment at F-serratus_M_contig8160:5780..9797- (Fucus serratus male)back to top |