mRNA_F-serratus_M_contig815.19571.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig815.19571.1
Unique NamemRNA_F-serratus_M_contig815.19571.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig815.19571.1 vs. uniprot
Match: A0A7S3ZU99_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZU99_9STRA)

HSP 1 Score: 529 bits (1363), Expect = 8.970e-185
Identity = 257/395 (65.06%), Postives = 307/395 (77.72%), Query Frame = 1
Query:    7 PRIFVKDFTRPISIPDEGIDAIVDVCRSGRLFRYSSESAEVSQVALAEKEMAAMTQARYALGVNSCSSAILIALRAVGLKPGDKVLTNAFTFTAVTSTLLRLGADPILVECCDSWTMDLDDLEEK-ASSSGAKFLLLSHMRGKVCDMDRVAEMCEQRGITLVEDCAHGCGVKWRGRQLGYHAKAACYSTQSDKVINSGEGGFVTTSDDDIAARAIFLSGAYETRFSKHLMRPSDALCEAYMLAVPNLSVRMSEITAAVLRPLIKNLPERVVEYNRKYQLVVNAIEAGAEGLIEVPRQDERVDGVGDHLNFRLIRASEEENLSFRTMCKDLGVPVSWLRSSLNARWHVNWRGFGGPVQDLPATDRALATAYDLKLPPHFNDEDMVHVGEIIAHAAR 1188
            P  F+KDF+RP+SIP+EGI A V+V R GRLFRY + SAE S VA AEKE AAM   +YALGVNSCSSAI++AL AVG+ PGD+V+TN FTFTA+ ST++RLGA+P+LVE   SWTMDLDDLE+K A+   AK LLLSHMRGKVCDMDRV E+CE+ GITLVEDCAH CGV WRG+QLGYHAK   YSTQSDKVINSGEGGF+TT DD+IAA+ I+LSG YE R+ KH +RP+D LCE  M  +PNLS RM+E+TAAV+RPLIKNLP+RV +YNR+Y  VV  +   A  +I VP QDERV  VGDHLNF L   ++E+N  FR  C  +GVPVSW +S +NARWHVNWR +G P  DLP TD  L  AYDLK+PP+F+D D      +IA+AAR
Sbjct:   43 PDPFLKDFSRPMSIPEEGIAAAVEVMRGGRLFRYCATSAETSHVAQAEKEFAAMVNQKYALGVNSCSSAIMLALMAVGVDPGDQVITNGFTFTALPSTIMRLGAEPVLVEATKSWTMDLDDLEKKIAAFPDAKVLLLSHMRGKVCDMDRVVEICEKNGITLVEDCAHSCGVTWRGKQLGYHAKVTAYSTQSDKVINSGEGGFITTDDDEIAAKIIYLSGCYERRYGKHAVRPADELCEVAMAEMPNLSCRMNEVTAAVMRPLIKNLPQRVEDYNRRYDSVVKVLREEAGDIIVVPTQDERVGTVGDHLNFYLTGVTDEQNALFRQTCVAMGVPVSWFQSQVNARWHVNWRKYGSPTFDLPNTDEVLRFAYDLKMPPYFDDADFPAFARVIAYAAR 437          
BLAST of mRNA_F-serratus_M_contig815.19571.1 vs. uniprot
Match: A0A7S4E6V5_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E6V5_9STRA)

HSP 1 Score: 526 bits (1355), Expect = 1.280e-183
Identity = 257/394 (65.23%), Postives = 306/394 (77.66%), Query Frame = 1
Query:    7 PRIFVKDFTRPISIPDEGIDAIVDVCRSGRLFRYSSESAEVSQVALAEKEMAAMTQARYALGVNSCSSAILIALRAVGLKPGDKVLTNAFTFTAVTSTLLRLGADPILVECCDSWTMDLDDLEEK-ASSSGAKFLLLSHMRGKVCDMDRVAEMCEQRGITLVEDCAHGCGVKWRGRQLGYHAKAACYSTQSDKVINSGEGGFVTTSDDDIAARAIFLSGAYETRFSKHLMRPSDALCEAYMLAVPNLSVRMSEITAAVLRPLIKNLPERVVEYNRKYQLVVNAIEAGAEGLIEVPRQDERVDGVGDHLNFRLIRASEEENLSFRTMCKDLGVPVSWLRSSLNARWHVNWRGFGGPVQDLPATDRALATAYDLKLPPHFNDEDMVHVGEIIAHAA 1185
            P  F+KDFTRP+SIP+EGI A V+V R GRLFRY + SAE SQVA AEKE AAM   +YALGVNSCSSAI++AL AVG++PGD+V+TN FTFTA+ ST++RLGA+P+LVE   SW MDLDDLE+K A+   AK LLLSHMRGKV DMDRV E+CE+ GITLVEDCAH CGV WRG+QLGYHAK   YSTQSDKVINSGEGGFVTT DD+IAA+ I+LSG YE R+ KH +RP D LCE  M  +PNLS RM+E+TAAV+RPLIKNLP+RV  YNR+Y  VV  +   A  +I VP QDERV  VGDHLNF L   ++E+N  FR  C  +GVPVSW +S +NARWHVNWR +G P  DLP TD  L  AYDLK+PP+F+DED     ++IA+A+
Sbjct:   40 PEPFLKDFTRPMSIPEEGIAAAVEVMRGGRLFRYCATSAETSQVAQAEKEFAAMVNQKYALGVNSCSSAIMLALMAVGVEPGDQVITNGFTFTALPSTIMRLGAEPVLVEATKSWIMDLDDLEKKIAAFPDAKVLLLSHMRGKVADMDRVVEICEKNGITLVEDCAHSCGVTWRGKQLGYHAKVTAYSTQSDKVINSGEGGFVTTDDDEIAAKMIYLSGCYERRYGKHAVRPPDDLCEVAMAEMPNLSCRMNEVTAAVMRPLIKNLPQRVEAYNRRYDAVVKVLREEAGDVIVVPTQDERVGTVGDHLNFYLTGVTDEQNALFRQTCVAMGVPVSWFQSKVNARWHVNWRKYGSPTFDLPNTDEVLRFAYDLKMPPYFDDEDFPAFAKVIAYAS 433          
BLAST of mRNA_F-serratus_M_contig815.19571.1 vs. uniprot
Match: A0A6H5K4I9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4I9_9PHAE)

HSP 1 Score: 520 bits (1338), Expect = 9.570e-182
Identity = 254/346 (73.41%), Postives = 291/346 (84.10%), Query Frame = 1
Query:  175 ARYALGVNSCSSAILIALRAVGLKPGDKVLTNAFTFTAVTSTLLRLGADPILVECCDSWTMDLDDLEEKASSSGAKFLLLSHMRGKVCDMDRVAEMCEQRGITLVEDCAHGCGVKWRGRQLGYHAKAACYSTQSDKVINSGEGGFVTTSDDDIAARAIFLSGAYETRFSKHLMRPSDALCEAYMLAVPNLSVRMSEITAAVLRPLIKNLPERVVEYNRKYQLVVNAIEAGAEGLIEVPRQDERVDGVGDHLNFRLIRASEEENLSFRTMCKDLGVPVSWLRSSLNARWHVNWRGFGGPVQDLPATDRALATAYDLKLPPHFNDEDMVHVGEIIAHAARATIRSHRD 1212
            A+YA+GVNSCSSAILI L  VG+K GD+VLTNAFTFTAV ST+LRLGA P LVEC DSWTMDLDDLE+KA+   AK LLLSHMRGKVCDMDRV+E+CE+  +TLVEDCAH  GV WRGRQLGYHAK + +STQSDKVINSGEGGFVTTSDD++AA+AI+LSGAYE R+SKHL+RPSDALCEA   + PNLSVRMSE TAAVLRPL+K+LP RV+EYNR+Y +VV  +EA A GLI+VP+Q E V  VGDHLNFRL + S+E NLSF+  CK+LGVPV+WLRS  NARWHVNWRGFG P QDLP TD ALA AYDLKLPP+F DED VH+  IIA+AAR+  RS  D
Sbjct:    3 AKYAVGVNSCSSAILIGLMCVGVKAGDEVLTNAFTFTAVPSTILRLGAKPCLVECGDSWTMDLDDLEKKANGGRAKVLLLSHMRGKVCDMDRVSEICERHRLTLVEDCAHAAGVTWRGRQLGYHAKVSAFSTQSDKVINSGEGGFVTTSDDEMAAKAIYLSGAYEGRYSKHLVRPSDALCEAARFSEPNLSVRMSETTAAVLRPLLKSLPSRVLEYNRRYNIVVKTMEAEALGLIDVPKQHELVGAVGDHLNFRLKKFSDEGNLSFQAKCKELGVPVNWLRSGGNARWHVNWRGFGCPAQDLPVTDSALAMAYDLKLPPYFEDEDFVHLARIIAYAARSCCRSAAD 348          
BLAST of mRNA_F-serratus_M_contig815.19571.1 vs. uniprot
Match: D7FMY1_ECTSI (Aminotransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMY1_ECTSI)

HSP 1 Score: 514 bits (1325), Expect = 5.310e-179
Identity = 252/405 (62.22%), Postives = 318/405 (78.52%), Query Frame = 1
Query:    7 PRIFVKDFTRPISIPDEGIDAIVDVCRSGRLFRYSSESAEVSQVALAEKEMAAMTQ------ARYALGVNSCSSAILIALRAVGLKPGDKVLTNAFTFTAVTSTLLRLGADPILVECCDSWTMDLDDLEEKASSSGAKFLLLSHMRGKVCDMDRVAEMCEQRGITLVEDCAHGCGVKWRGRQLGYHAKAACYSTQSDKVINSGEGGFVTTSDDDIAARAIFLSGAYETRFSKHLMRPSDALCEAYMLAVPNLSVRMSEITAAVLRPLIKNLPERVVEYNRKYQLVVNAIEAGAEGLIEVPRQDERVDGVGDHLNFRLIRASEEENLSFRTMCKDLGVPVSWLRSSLNARWHVNWRGFGGPVQDLPATDRALATAYDLKLPPHFNDEDMVHVGEIIAHAARATIRS 1203
            P +F KDFT P+ IP+E I  +VDV RSGR+ RYS+ SAE SQVA  E+E+   T        +YALGVNSCSSAILIAL +VG+K GD+VL+NAFTFTAV S +LR+G  P+LVEC +SW MDLDDLE+KA+SS AK LLLSHMR K+CDMDR+ E+C++ G+T+VEDCAH  GV WRG QLG  AK A YS QSDK+INSGEGGF+TT+D+++ ++AI++SG YE R+ KH +R SD L E  ML+  NLSVRM+E+TAAV+RPL+ NLPERV +++R+YQ VV  +E     LIEVP+  E    VGDHLNF L+  +EEEN +F+   K++GVP++WLRS +NAR+HVNWRG+GGPVQDLPATD ALATAYDLKLPPHF+DED  H+ +IIA+AAR T+R+
Sbjct:   37 PPVFKKDFTLPMGIPEESIAGVVDVLRSGRINRYSASSAEASQVAQLEQELVDFTGRGEGPGVKYALGVNSCSSAILIALLSVGVKSGDEVLSNAFTFTAVPSAILRIGGKPVLVECENSWGMDLDDLEKKAASSTAKVLLLSHMRSKMCDMDRLYEICDKHGLTVVEDCAHALGVNWRGTQLGNRAKVAAYSCQSDKLINSGEGGFLTTNDEELFSKAIYMSGCYEMRYGKHSVRGSDELMEKAMLSERNLSVRMTEMTAAVIRPLLANLPERVAQFHRRYQEVVGILEEQVPDLIEVPKPLEHASVVGDHLNFHLVDPTEEENKAFQAKTKEMGVPLNWLRSPVNARYHVNWRGYGGPVQDLPATDAALATAYDLKLPPHFDDEDFAHLAKIIAYAARVTVRA 441          
BLAST of mRNA_F-serratus_M_contig815.19571.1 vs. uniprot
Match: A0A7S3FD09_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3FD09_9VIRI)

HSP 1 Score: 495 bits (1274), Expect = 3.500e-171
Identity = 238/398 (59.80%), Postives = 300/398 (75.38%), Query Frame = 1
Query:    7 PRIFVKDFTRPISIPDEGIDAIVDVCRSGRLFRYSSESAEVSQVALAEKEMAAMTQARYALGVNSCSSAILIALRAVGLKPGDKVLTNAFTFTAVTSTLLRLGADPILVECCDSWTMDLDDLEEKASSSGAKFLLLSHMRGKVCDMDRVAEMCEQRGITLVEDCAHGCGVKWRGRQLGYHAKAACYSTQSDKVINSGEGGFVTTSDDDIAARAIFLSGAYETRFSKHLMRPSDALCEAYMLAVPNLSVRMSEITAAVLRPLIKNL-PERVVEYNRKYQLVVNAIEAGAEGLIEVPRQDERVDGVGDHLNFRLIRASEEENLSFRTMCKDLGVPVSWLRSSLNARWHVNWRGFGGPVQDLPATDRALATAYDLKLPPHFNDEDMVHVGEIIAHAARATI 1197
            P  FVKDF++P+SIP EGIDA V+V R+GR+FRYSS SAE SQVA AEKE A M   +YA+ VNSCSSAI +A+  VG+KPGD+V+TN FTFTA+ S ++R+GA+P+LVE  + +TMDLDDLE+KA  S AK LLLSHMRGKVCDMDRV E+CE+ G+TLVEDCAHGCGV W+GRQLGYHA  ACYSTQSDKVINSGEGGF+TT  DDIAA+AI+ +G YE R++KHL++P + LCE YML  PNLS RM+E+TAA++RPLI+NL  ER   YN +Y ++   + A A   I VP Q E V  +GDHLNF L   + E+N +FR   K+LG+ + W  S++NAR+H NW  +G PV DLP TD  L  +YD+K PP F++ED  H+   IA+A    +
Sbjct:   50 PDSFVKDFSKPMSIPQEGIDAAVEVMRTGRIFRYSSTSAETSQVANAEKEFAEMVGQKYAIAVNSCSSAIFVAMMCVGVKPGDQVITNGFTFTALPSCIMRIGAEPVLVEATEQYTMDLDDLEKKAQESDAKVLLLSHMRGKVCDMDRVVEICEKYGLTLVEDCAHGCGVMWKGRQLGYHAAVACYSTQSDKVINSGEGGFITTDVDDIAAQAIYYTGCYERRYNKHLVQPPEYLCEQYMLTKPNLSCRMTEVTAAMMRPLIRNLYSERKPRYNARYAMLCKVMAAMAGEHIFVPEQHEHVGNMGDHLNFTLRNVTPEQNAAFRDTVKELGITLGWFTSNVNARFHKNWEKYGTPVYDLPQTDNILEYSYDMKCPPDFDNEDYPHIAHCIAYAVNKAV 447          
BLAST of mRNA_F-serratus_M_contig815.19571.1 vs. uniprot
Match: A0A8J2WEJ6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WEJ6_9STRA)

HSP 1 Score: 492 bits (1266), Expect = 1.220e-167
Identity = 240/368 (65.22%), Postives = 285/368 (77.45%), Query Frame = 1
Query:   85 RSGRLFRYSSESAEVSQVALAEKEMAAMTQARYALGVNSCSSAILIALRAVGLKPGDKVLTNAFTFTAVTSTLLRLGADPILVECCDSWTMDLDDLEEK-ASSSGAKFLLLSHMRGKVCDMDRVAEMCEQRGITLVEDCAHGCGVKWRGRQLGYHAKAACYSTQSDKVINSGEGGFVTTSDDDIAARAIFLSGAYETRFSKHLMRPSDALCEAYMLAVPNLSVRMSEITAAVLRPLIKNLPERVVEYNRKYQLVVNAIEAGAEGLIEVPRQDERVDGVGDHLNFRLIRASEEENLSFRTMCKDLGVPVSWLRSSLNARWHVNWRGFGGPVQDLPATDRALATAYDLKLPPHFNDEDMVHVGEIIAHAA 1185
            R GRLFRY + SAE SQVA AEKE AAM   +YALGVNSCSSAI++AL AVG++PGD+V+TN FTFTA+ ST++RLGA+P+LVE   SW MDLDDLE+K A+   AK LLLSHMRGKV DMDRV E+CE+ GITLVEDCAH CGV WRG+QLGYHAK   YSTQSDKVINSGEGGFVTT DD+IAA+ I+LSG YE R+ KH +RP D LCE  M  +PNLS RM+E+TAAV+RPLIKNLP+RV  YNR+Y  VV  +   A  +I VP QDERV  VGDHLNF L   ++E+N  FR  C  +GVPVSW +S +NARWHVNWR +G P  DLP TD  L  AYDLK+PP+F+DED     ++IA+A+
Sbjct:    2 RGGRLFRYCATSAETSQVAQAEKEFAAMVNQKYALGVNSCSSAIMLALMAVGVEPGDQVITNGFTFTALPSTIMRLGAEPVLVEATKSWIMDLDDLEKKIAAFPDAKVLLLSHMRGKVADMDRVVEICEKNGITLVEDCAHSCGVTWRGKQLGYHAKVTAYSTQSDKVINSGEGGFVTTDDDEIAAKMIYLSGCYERRYGKHAVRPPDDLCEVAMAEMPNLSCRMNEVTAAVMRPLIKNLPQRVEAYNRRYDAVVKVLREEAGDVIVVPTQDERVGTVGDHLNFYLTGVTDEQNALFRQTCVAMGVPVSWFQSKVNARWHVNWRKYGSPTFDLPNTDEVLRFAYDLKMPPYFDDEDFPAFAKVIAYAS 369          
BLAST of mRNA_F-serratus_M_contig815.19571.1 vs. uniprot
Match: A0A7S0J159_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J159_9EUKA)

HSP 1 Score: 488 bits (1256), Expect = 1.370e-167
Identity = 239/397 (60.20%), Postives = 295/397 (74.31%), Query Frame = 1
Query:    7 PRIFVKDFTRPISIPDEGIDAIVDVCRSGRLFRYSSESAEVSQVALAEKEMAAMTQARYALGVNSCSSAILIALRAVGLKPGDKVLTNAFTFTAVTSTLLRLGADPILVECCDSWTMDLDDLEEKASSSGAKFLLLSHMRGKVCDMDRVAEMCEQRGITLVEDCAHGCGVKWRGRQLGYHAKAACYSTQSDKVINSGEGGFVTTSDDDIAARAIFLSGAYETRFSKHLMRPSDALCEAYMLAVPNLSVRMSEITAAVLRPLIKNLPERVVEYNRKYQLVVNAIEAGAEGLIEVPRQDERVDGVGDHLNFRLIRASEEENLSFRTMCKDLGVPVSWLRSSLNARWHVNWRGFGGPVQDLPATDRALATAYDLKLPPHFNDEDMVHVGEIIAHAARATI 1197
            P  F KDF++P+++P  GI+A V+V RSGRLFRY +     SQVALAE E A M   +YALGVNSCSSAI++AL  VG+  GD+VLTN FTFTA+ ST++RL A+P+LVE  D WTMDLDDLE KA++SGA  LLLSHMRGKV DMDRVA++C++ G+ LVEDCAH CGVKWRGRQLGYH + A YSTQSDKVINSGEGGF+TT+D  + A+AI+LSG YE R++KH   P   LCEA M+ +PNLS RM+E+TAA +RPLI NL  RVVEYN +Y +VVN +   A   I VP Q  +V  VGDHLNF L   + E+N  F  +C  +GVPVS+ RS +NARWHVNWR +G P  +LP  D  LATAYDLKLPP+F   D  H+ ++IA+AA   +
Sbjct:  105 PPPFTKDFSKPMAVPAAGIEAAVEVMRSGRLFRYCAVD---SQVALAESEFAQMVDQKYALGVNSCSSAIMLALMVVGVAAGDRVLTNGFTFTALPSTIMRLHAEPVLVEATDQWTMDLDDLERKAAASGATVLLLSHMRGKVADMDRVADICQRHGLRLVEDCAHSCGVKWRGRQLGYHGEVAAYSTQSDKVINSGEGGFLTTNDGGLMAKAIYLSGCYERRYAKHGTPPPKELCEAAMMEMPNLSCRMNEVTAACVRPLIANLDARVVEYNDRYAVVVNILREQAGDHIVVPEQLPQVSSVGDHLNFYLRGVTAEQNTLFHEVCTSMGVPVSYFRSPVNARWHVNWRKYGSPTYELPQVDSLLATAYDLKLPPYFAAADFAHLAQVIAYAANVAV 498          
BLAST of mRNA_F-serratus_M_contig815.19571.1 vs. uniprot
Match: K8ECV9_9CHLO (Aminotransferase, DegT/DnrJ/EryC1/StrS family protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8ECV9_9CHLO)

HSP 1 Score: 473 bits (1218), Expect = 8.690e-162
Identity = 224/393 (57.00%), Postives = 290/393 (73.79%), Query Frame = 1
Query:    7 PRIFVKDFTRPISIPDEGIDAIVDVCRSGRLFRYSSESAEVSQVALAEKEMAAMTQARYALGVNSCSSAILIALRAVGLKPGDKVLTNAFTFTAVTSTLLRLGADPILVECCDSWTMDLDDLEEKASSSGAKFLLLSHMRGKVCDMDRVAEMCEQRGITLVEDCAHGCGVKWRGRQLGYHAKAACYSTQSDKVINSGEGGFVTTSDDDIAARAIFLSGAYETRFSKHLMRPSDALCEAYMLAVPNLSVRMSEITAAVLRPLIKNL-PERVVEYNRKYQLVVNAIEAGAEGLIEVPRQDERVDGVGDHLNFRLIRASEEENLSFRTMCKDLGVPVSWLRSSLNARWHVNWRGFGGPVQDLPATDRALATAYDLKLPPHFNDEDMVHVGEIIAHA 1182
            P  F KDF++P+SIP EGI+A + V  SGR+FRY + SAE S+VA AE + A M   +YA+GVNSCSSAI IA+ A G++ GDKVLTN FTFTA+ S +LR+G +P+LVEC +++TMDLDDL++KA  SGAK LL+SHMRGKVCDMD+V  +CE+ G+ L+EDCAHGCGV+++GRQLGYH     YSTQSDKVINSGEGGF+TT DDDIAAR +++SG YE R+SKH   P   LCE YML +PNLS RM+E+TAA++RPLI NL  ER+  Y  ++ L+ + I+  A   + VP     V+ VGDHLNF L   +EEEN  FR +  +LGV + W  SS+NAR+H NW  +G P  DLP TD+ L  +YD+K+PP F  ED  H+G +I++A
Sbjct:  110 PEKFTKDFSKPMSIPTEGIEAAIRVMESGRVFRYCATSAETSEVAQAEDQFAEMVGQKYAIGVNSCSSAIFIAMLATGVEQGDKVLTNGFTFTALPSCILRIGCEPVLVECTENFTMDLDDLDKKAGESGAKVLLMSHMRGKVCDMDKVVAICEKHGMKLIEDCAHGCGVRYKGRQLGYHGVVTAYSTQSDKVINSGEGGFITTDDDDIAARCLYMSGCYERRYSKHARMPPQELCEKYMLTMPNLSSRMNEVTAAMMRPLIANLYSERLPRYMERWLLITSVIDLMAGEYVSVPTSGPNVEDVGDHLNFTLKNVTEEENAKFREITTELGVNLGWFTSSVNARFHKNWEKYGTPKYDLPQTDKVLEYSYDMKMPPDFETEDFQHIGHVISYA 502          
BLAST of mRNA_F-serratus_M_contig815.19571.1 vs. uniprot
Match: A0A7S3NJM7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NJM7_9STRA)

HSP 1 Score: 431 bits (1109), Expect = 1.370e-146
Identity = 218/395 (55.19%), Postives = 274/395 (69.37%), Query Frame = 1
Query:    7 PRIFVKDFTRPISIPDEGIDAIVDVCRSGRLFRYSSESAEVSQVALAEKEMAAMTQARYALGVNSCSSAILIALRAVGLKPGDKVLTNAFTFTAVTSTLLRLGADPILVECCDSWTMDLDDLEEKAS-SSGAKFLLLSHMRGKVCDMDRVAEMCEQRGITLVEDCAHGCGVKWRGRQLGYHAKAACYSTQSDKVINSGEGGFVTTSDDDIAARAIFLSGAYETRFSKHLMRPSDALCEAYMLAVPNLSVRMSEITAAVLRPLIKNLPERVVEYNRKYQLVVNAIEAGAEGLIEVPRQDERVDGVGDHLNFRLI-RASEEENLSFRTMCKDLGVPVSWLRSSLNARWHVNWRGFGGPVQDLPATDRALATAYDLKLPPHFNDEDMVHVGEIIAHAA 1185
            P  F KDF++P+++P+ GI A + V +SGRLFRY +     SQV++ EKE A  TQ +Y + VNSCSSAI+++L A G++PGDKV TN FTFTA+ ST++RL A PILVE C  WTM+LDDL+ K +     K +L+SHMRG+VCDMDR+ E+C +R   L+EDCAHGCGVKW  RQLGYH   A YSTQSDKVINSGEGG + T D  IAA+ I++SGAYE R+ KHL RP D LCE  ML  PNLS RMSE+TAAV RPL+ NLP RV+ YN +Y L+ +   A    +++VP  D R   VGDH NF L    +E +N  F+ +C   GVPVS   S +NAR+H NWR FG P  DLP TD  L  +YDLKLPP F   D+ H+  I+ +AA
Sbjct:   28 PTKFEKDFSQPMAVPESGIAAAIQVMKSGRLFRYCAIE---SQVSMLEKEFAEFTQRKYCVAVNSCSSAIMLSLLAAGIQPGDKVATNGFTFTALPSTIMRLNAIPILVESCQDWTMNLDDLQTKLNLHKDIKIVLVSHMRGRVCDMDRLVEICAER--ILLEDCAHGCGVKWNNRQLGYHGVLASYSTQSDKVINSGEGGLLVTDDAQIAAQLIYMSGAYERRYQKHLTRPDDILCEEAMLKYPNLSCRMSELTAAVARPLLANLPSRVITYNARYDLICSI--ATKNNVLKVPGHDYRCAPVGDHFNFYLSSNLTEAQNQKFKAICHQFGVPVSSFISPINARYHKNWRKFGAPHFDLPQTDHILRYSYDLKLPPIFTSSDIEHIANILDYAA 415          
BLAST of mRNA_F-serratus_M_contig815.19571.1 vs. uniprot
Match: F0YLY5_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YLY5_AURAN)

HSP 1 Score: 354 bits (908), Expect = 7.620e-116
Identity = 183/383 (47.78%), Postives = 247/383 (64.49%), Query Frame = 1
Query:   73 VDVCRSGRLFRYSSESAEVSQVALAEKEMA-AMTQARYALGVNSCSSAILIALRAVGLKPGDKVLTNAFTFTAVTSTLLRLGADPILVECCDSWTMDLDDLEEKASS-SGAKFLLLSHMRGKVCDMDRVAEMCEQRGITLVEDCAHGCGVKWRGRQLGYHAKAACYSTQSDKVINSGEGGFVTTSDDDIAARAIFLSGAYETRFSKHLMRPSDA-LCEAYMLAVPNLSVRMSEITAAVLRPLIKNLPERVVEYNRKYQLVVNAIEAGAEGLIEVPRQDERVDGVGDHLNFRLIRASEEENLSFRTMCKDLGVPVSWLRSSLNARWHVNWRGFGGPVQDLPATDRALATAYDLKLPPHFNDEDMVHVGEIIAHAARATIRSHRD 1212
            V   RSGRLFRY + SA  S+VA AE+E A  +  +R+A+GVNS SSA+++ L AVG+KPGD+V+ N F FT V ST++RLGA+P+LV+    + +D+ DLE K  +   A+ L+LSH RG+VCD+DRVA + E R + +VEDC H  G  WRGR +G     A +  +SD ++N GE GF TT D + AA+ ++LSG YE R+ KH  RP D  L E  M  +P LS RMSE++AA LRP + +L +RVVE NR++ L+  ++   A G + +P  D R   VGD L F +    E  N  FRT C  LGVPV+WL+S  NA +H NWR +G P  +LP TD  L TAYDL LP +F D+D+ HV EI+A+A      +  D
Sbjct:   58 VRAMRSGRLFRYGASSAASSEVARAEREFADGVAGSRFAVGVNSGSSALMLGLMAVGVKPGDRVVCNGFAFTGVPSTIMRLGAEPVLVDTDAHFRLDVADLEAKLDAFPDARALVLSHTRGRVCDLDRVAALAEARKLDVVEDCGHAAGASWRGRPVGRLGAVAAFGARSDSMLNGGEAGFATTDDAETAAKLVYLSGCYERRYGKHGARPEDDDLLERAMATMPYLSTRMSELSAACLRPAVASLADRVVEANRRHALIARSLGDLAGGGVVLPESDPRASCVGDRLTFSVPALDEAANGFFRTTCVALGVPVAWLKSPANAFYHGNWRNYGAPTFELPGTDALLETAYDLALPAYFGDDDLRHVAEIVAYAYACAAAASED 440          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig815.19571.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3ZU99_9STRA8.970e-18565.06Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7S4E6V5_9STRA1.280e-18365.23Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A6H5K4I9_9PHAE9.570e-18273.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FMY1_ECTSI5.310e-17962.22Aminotransferase n=2 Tax=Ectocarpus TaxID=2879 Rep... [more]
A0A7S3FD09_9VIRI3.500e-17159.80Hypothetical protein n=1 Tax=Prasinoderma singular... [more]
A0A8J2WEJ6_9STRA1.220e-16765.22Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S0J159_9EUKA1.370e-16760.20Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
K8ECV9_9CHLO8.690e-16257.00Aminotransferase, DegT/DnrJ/EryC1/StrS family prot... [more]
A0A7S3NJM7_9STRA1.370e-14655.19Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
F0YLY5_AURAN7.620e-11647.78Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig815contigF-serratus_M_contig815:275085..283151 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score515.8
Seed ortholog evalue1.9e-143
Seed eggNOG ortholog2880.D7FMY1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Aminotransferase, DegT DnrJ EryC1 StrS family protein
EggNOG OGs2QQV8@2759,COG0399@1
Ec32 ortholog descriptionAminotransferase
Ec32 orthologEc-11_003810.1
COG Functional cat.M
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons7
Model size1215
Cds size1215
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932433.345355-CDS-F-serratus_M_contig815:275084..2754311622932433.345355-CDS-F-serratus_M_contig815:275084..275431Fucus serratus maleCDSF-serratus_M_contig815 275085..275431 +
1690964306.747445-CDS-F-serratus_M_contig815:275084..2754311690964306.747445-CDS-F-serratus_M_contig815:275084..275431Fucus serratus maleCDSF-serratus_M_contig815 275085..275431 +
1622932433.3571568-CDS-F-serratus_M_contig815:280349..2804341622932433.3571568-CDS-F-serratus_M_contig815:280349..280434Fucus serratus maleCDSF-serratus_M_contig815 280350..280434 +
1690964306.7661006-CDS-F-serratus_M_contig815:280349..2804341690964306.7661006-CDS-F-serratus_M_contig815:280349..280434Fucus serratus maleCDSF-serratus_M_contig815 280350..280434 +
1622932433.3749774-CDS-F-serratus_M_contig815:280672..2807921622932433.3749774-CDS-F-serratus_M_contig815:280672..280792Fucus serratus maleCDSF-serratus_M_contig815 280673..280792 +
1690964306.7758396-CDS-F-serratus_M_contig815:280672..2807921690964306.7758396-CDS-F-serratus_M_contig815:280672..280792Fucus serratus maleCDSF-serratus_M_contig815 280673..280792 +
1622932433.391067-CDS-F-serratus_M_contig815:281058..2811851622932433.391067-CDS-F-serratus_M_contig815:281058..281185Fucus serratus maleCDSF-serratus_M_contig815 281059..281185 +
1690964306.7890127-CDS-F-serratus_M_contig815:281058..2811851690964306.7890127-CDS-F-serratus_M_contig815:281058..281185Fucus serratus maleCDSF-serratus_M_contig815 281059..281185 +
1622932433.4050853-CDS-F-serratus_M_contig815:282100..2822611622932433.4050853-CDS-F-serratus_M_contig815:282100..282261Fucus serratus maleCDSF-serratus_M_contig815 282101..282261 +
1690964306.799298-CDS-F-serratus_M_contig815:282100..2822611690964306.799298-CDS-F-serratus_M_contig815:282100..282261Fucus serratus maleCDSF-serratus_M_contig815 282101..282261 +
1622932433.4172819-CDS-F-serratus_M_contig815:282452..2825871622932433.4172819-CDS-F-serratus_M_contig815:282452..282587Fucus serratus maleCDSF-serratus_M_contig815 282453..282587 +
1690964306.8106794-CDS-F-serratus_M_contig815:282452..2825871690964306.8106794-CDS-F-serratus_M_contig815:282452..282587Fucus serratus maleCDSF-serratus_M_contig815 282453..282587 +
1622932433.4288688-CDS-F-serratus_M_contig815:282911..2831511622932433.4288688-CDS-F-serratus_M_contig815:282911..283151Fucus serratus maleCDSF-serratus_M_contig815 282912..283151 +
1690964306.821041-CDS-F-serratus_M_contig815:282911..2831511690964306.821041-CDS-F-serratus_M_contig815:282911..283151Fucus serratus maleCDSF-serratus_M_contig815 282912..283151 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig815.19571.1prot_F-serratus_M_contig815.19571.1Fucus serratus malepolypeptideF-serratus_M_contig815 275085..283151 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig815.19571.1

>prot_F-serratus_M_contig815.19571.1 ID=prot_F-serratus_M_contig815.19571.1|Name=mRNA_F-serratus_M_contig815.19571.1|organism=Fucus serratus male|type=polypeptide|length=405bp
PVPRIFVKDFTRPISIPDEGIDAIVDVCRSGRLFRYSSESAEVSQVALAE
KEMAAMTQARYALGVNSCSSAILIALRAVGLKPGDKVLTNAFTFTAVTST
LLRLGADPILVECCDSWTMDLDDLEEKASSSGAKFLLLSHMRGKVCDMDR
VAEMCEQRGITLVEDCAHGCGVKWRGRQLGYHAKAACYSTQSDKVINSGE
GGFVTTSDDDIAARAIFLSGAYETRFSKHLMRPSDALCEAYMLAVPNLSV
RMSEITAAVLRPLIKNLPERVVEYNRKYQLVVNAIEAGAEGLIEVPRQDE
RVDGVGDHLNFRLIRASEEENLSFRTMCKDLGVPVSWLRSSLNARWHVNW
RGFGGPVQDLPATDRALATAYDLKLPPHFNDEDMVHVGEIIAHAARATIR
SHRD*
back to top

mRNA from alignment at F-serratus_M_contig815:275085..283151+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig815.19571.1 ID=mRNA_F-serratus_M_contig815.19571.1|Name=mRNA_F-serratus_M_contig815.19571.1|organism=Fucus serratus male|type=mRNA|length=8067bp|location=Sequence derived from alignment at F-serratus_M_contig815:275085..283151+ (Fucus serratus male)
CCTGTGCCCCGCATCTTTGTGAAAGACTTTACGCGCCCGATTAGTATTCC GGACGAGGGCATCGACGCTATCGTTGACGTATGTCGCAGCGGGAGGCTGT TCCGATACAGCAGTGAGTCCGCCGAAGTGTCCCAGGTAGCGCTCGCCGAG AAAGAGATGGCTGCCATGACCCAGGCACGTTACGCGCTGGGCGTGAACTC GTGCTCGTCGGCAATCCTTATCGCTCTGCGGGCCGTGGGCTTGAAGCCGG GGGACAAGGTTCTCACGAATGCTTTTACGTTCACTGCAGTGACGTCGACT TTACTGCGGCTGGGCGCAGATCCGATCTTGGTGGAGTGCTGCGACAGGTG CGGATGGTGGTGCTATGAACGGCCGACTAACTGCGACTTGACTACGGGTC GAAAGCAACATGATATTTGGAACTCTATATAAATAAACAAAGTATATTGC AACCGTGACGGTCGCGCGGCGTATCATCGATAAAAATACCGACTGTCCTT TTGTACAGTATATTCAAGTGCTCTGTATATAATTTTTGTTTATGGAAGAT CGAAGATCGTCATTGCTACAGTGTGTGTGTGTGTGTGTGTGTGTATTTAT TAAATTGCACATAACCGCGCAATCCGGCCCTATCATCCTAGTCATTCTAT GCCACTCGCATTGATCCTCCCTCGGGAGGATGAATGATACTTATTACTGT GTGTGTGTGTGCGCGCGTGTGTTGTCTTCCCATTCGTTCTGGACATCAAG TCCGTTCGACGTACCAGCCGGGTTCACACAGGAGGAAGGCCACACAGGAT AGTACATGGCTAGATAGAATGCGAGTCATTGGACTAAAATGCAACTACAT ACAGTACAACCAGTACAATATTTACAATTTACCTACTACAGAGTAGCTCT ACTGCTGCTGTTGAAATAAAAATCAGTACGCGCCTAGACCTTCTGAAAAT AAATAAATCTGAACGCATCTTGATGACCTTCTGAGCATCCCCCAGTTAGG GGGGAAAATGTCAAAACGTTTAGGTGGGATCATAGGCAGCAAAGACAAAA CTTCTTCATGGCATTTAAACGGGTTCCCCGATAGTAGTAGCATTGGGTCA ACAGTATAATACACTTACATTAATCGTCAGGCGCAGCGACACCAGAGAAA AACAAAACATAAAGGTCATTGTACATAGTAGCTTTTCTTCAAATAAACAG GTTAGTAACAATAGTGCCATCGAACCATTTGTTGTACCAGTATGCAGCTG ACGCCTCCGAGACGCTTGAAGAGTATAAAAAGAAAAATCTGAACAAATAA ATCTAGAGCTAGTAAATTAAATAGGGTATGGCTATTTGGCCCACCGGTGG GCTATTCTCTTGTTTGCCCCCCCACCTGGATCTCGCGCCAGAAGACTTGG TTGGTCACAGTACATGCATGGGTGTGCTAGGGTTAGGGTTAGCTATTATC GGGTCTATCGTGCAGCCCAAACGGTCCCGTCTACGTGCTACCACGGCCGG TGGGGTGGTTGGTGTTTTTTGGTATGTATGGCTATTTGCCCCTACATACC AGAAACACCGACCACCCCACCGGCCGTAACATCACGTAGACAGGACCGTT TGGGCTACACGAATGACCTCATGATAGCCCTGCAACGCGCCAACACACTC GTGCATGTATTGTGACCAACCGTGTCTTCTGACGCGAGATCCAGGTGGTG GGGTAAATTTGGGTATGGCCCACCGGTGGGGCAAATGGCCATTCCCAATT AAATACTACGAACCACTAGTATTTGTAACATTTTTTTAGTTCGGACATGA GTCTGACTCGGTCGGATAAGAATGTGTAGATGATACAGGTTGTTGTTATT ATAGCATATTACAGTAGATGGGATGAGGGTGTTTCCTAGACGACGTCAGA GCGTTCGGCATCAACGCCGACCAGTGGACGACTGCAGCCCAGGACGATAG GGAATGGCGCAGGACGGTGGAACAAGGAGCGGAACTTTTTTTCATGGCGA AATTGATCGCTGCAGAGAAAAAAGCCAGGGCTCTGGACGACGGCTTGCAG TAGTATGCCCGAACGTGACGGGAAGGGCCAAGGAGAGGATAATAGCCCAA AGCAAGCAGGCTAGTGCTGACTCGCGCGCCATAGTCGACTAGCCACAGGT GGCGCGAACTTGAACCCTCCGGGCGGTTCGGTTTGGTTCGGTTTGCAGAT ATCTGATGTCGTGTCGTCTTTCTCTGGTACTATGTTCGTTTTTGTGTTGT TTCGTTTCCGGCTTTCTGCTTTCTTCATTGAAGCCGCGGCCGTTGGTTCA ATCGTTCTTCGTCCTTCGATATACCGCGCTTCATACCAATAGTGGGTGTG GGAAAGATAGGCGCATATTAATTGGTCCATGGTGACCTGCCAAGGCATGC CAAGGCAGCACCCGATTGGAACTTAACTACCCTGAGGTTTACTCGCCCTG TTTCGGTGGACTCTCGGCAGTTAACGCCATCGATACGCAAGTGCGTGACC CGATAAACTCGGGACTGGTCCGATAGCGTATTATGGCGGTTTAAATATAT AAATGACTTGCCGCGGAAATCGAGAGGAATCCTCCAAGTAAGCCCCTGAT TGAGCTTGAGTACGGAGATGAACAGGCTGACGCGGGACGGGACGACTGCC GAACCCGTATCACGAGGCCAAATTCTCAGGCGCGAACAGGGACATGGAAA ACATATTTTCTTTGTTCAGCTGACCACGAGCAGGATTGGCACCCGGTTGA TGTCATGACTATACATACATCCATACATTCAAGCGCCACGACAGCTACAC AGAGTTACCTAGCAACTAACTGTCTGCGTCATCTTTTTTGTTTGGGAATG GCTATTTGCCCCACCGGTGGGCCATACCCAAATTTACCCGACCACCTGGA TCTCGCGTCAGAAGACACAGTTGGTCACAATACATGCACGAGTGTGTTGG CGCGTTGCAGGACTATTATGGGGTCATTCGTGCAGCCCAAACGATCCTGT CTACGTGATGTTACGGCCGGTGAGGTGGTTGGTGTTTTCTGGTATGAAAG GGCAAACAGCCATACATACCAGAAAACACCAACCACCCTTCCGGCCGTGG CAGCACGTAGACAGGACCGTTTGGGCTGCACGATAGACCCGATAATAGTT AACCCTAACCTTAACACACCCATGCATGTACTGTGACCAACTAAGTCTTC TGGCGCGAGATCCAGGTGGGGGGTAAACAAGAGAATATCCCTCCACCGGT GGGGCAAATAGCCATACTCTTTTTGTTTTGTTTCTGTTGAGATGTCGCTT TTTCCGAGTATTTTCGTACCGTTACCGATTTTGTCTTTCTAGAGAGTGTG TGTGTTTGTAATTTCTTCCCATTTATTCTGGACATCAAGTTCGTTGGACG TACCAACCGGGGTCGCACAGGAGGAAGGTCACACAGGTTTTCTCATCAAC CTTCTGCGGTGCGTGCCTTATTTTTTCTCGCGAGAAGGATTCAGCCGTTG CCTTCTCTCGTCGACCTTGAAGTCGAATACGCCGTACGTTCTCCCTTTCC GGACGACGGTGTTTTTCTACCTTGTGACCACGGGCTGGATTTTCGCCATT ATTATTAGCTTATTTTTTGAAGAAAAATCTGAATGCACCTAGAAGACCTT CTGATCCATTATTAGGCTTGAAAACTTATCAGTCGATCAACAGAGATGTA CCACCACTATTATATCTACTACTTCAGCAGCCTTTGATCTCACCTAAACG TTTTGACATTTTTTCTTCTGACTGGAGGATGCTCAGAAAGTAGAGGTTGG TGCGTTCTGGTTTTTCTTTATACACTGTATAGAAAGGCTAGGTGCATTCA CAATTTTCTTTATACACTGTAGTTTTTCCAGTTTTTGATTGGACAGGCCC CACGCGCTATCATGTCCGTATCGATCTGGAGATCATCTCGTGGCAAACTC TAATCACAAGCGCCCAATGCGCTGAACAGTTCCTATTTCAACCGATACAG CAGTAGTCTATCCATGAAAGTGGCGGGCTTTAGTTGAGCGAAAAAGCCTC CCCCCCTATGAGGCACGCTACGTAAATCGACAGCGAGTAAAGTATCAAGC AAGCTCGTCCTCTATAACAAATATACGGTCGCCGCACATTTGTTCGGCAG CTCACGGTAGGATCATGCAGAACCCAGCTGACAAACATCTACCTGGTATA TATTTCAACTGTTTGCAGCGAAGCACCACAACTTTAGGTACACTTTTTTT TTATGTTCCTTATTTGGGTTAGCTTGTAAAACGGAAATAAATTCGTTTCT TTGCCTTGAAAAAAAGCGAGAAAGAGAAGGTACTGGGTAAATGTCAGAAC GATTTTTAATGTAAAGACAACAACTGGGGGATGCTCTGATTTTTCTTTAG ACAAACTACCATCGGGGAACCCGGTTGAATGCCATGTAGTGGCTTTGTAT TTACAGCCTATCTATGCAATAGTAAATTATTACTACCATGTGTGAAGGTG TAGACCACATTGTTTCTGTTTCGTTTTTACTGTTTTTCTGGTGTCCCTGC ATGGCGATTAATATAAAGTACAGTATAACGTTGGGCTTCTCCCCGACATA ATACTGTTGGCCCAATATTATCACCATCGAGGAACCCGTTTTTTTATGAA ATGCCATGAAGAGGCTTTGTATATTTGCAGCCTTTGATCCCACCTAAACG TTTTTATATATTTTCCCCCCTGATTGGGGGAGCTCAGAAGGTCTAGGCGC GTTCTATTTTTTCTTTAAATAACTATCAAGTGTAATCCTATTTCTAGCAT TATAAGCGTAGAATTTTGCGAAGCGGCACTCACCAGCCTAGCCGACTATA GGACAGCCGAGGAATCCTGTACAGGCGCAAGATGGACCGTGACCTGCGTG TAGGTAGCACCTAGGAATGAATGTAGATGCGTCACGTGAATTTTATCTTG TTTTCTCCAAACGAGCAGCGCGGGAGGCGGGCGGCCGGAAGGTGCGCTGC CCAGCAGGCTTTTCTTTTTTTGTTCTCTTTTCCCTGTTCAGCAGAAGAAT ACGATCAGGATTGGCCACCGTGTAAAGTAGTTTTTCGGGTGTTCAACCAA TCAACGCGCTGAATGCGAGAAACAACAAACGCATGTTACTGTACAGCTGT AATATCCAACTACTACTTTACTGTAATTTTTTTTTTTTTTTTTTTTAAGA AATTATTTCCGAGGTTGGTTATATTTTCCATCTGTCTTACGCGCCACGTG TTTGTTGCTTTTCAGCTGGACCATGGACCTCGACGACTTAGAGGAGAAGG CTAGCAGCAGCGGCGCCAAGTTCCTCCTTTTATCGCACATGCGCGGCAAG GTGATACCCATAACCATAAACCCATGCCGCCCCTTCGAGGCCCGTTGAGG ACTTGCCTTTTACAACATAGCCTTTATAGGAATGGTCCAAACATGCACAT CCATGCCAGCGCCACGTAGCTCAGGGCATCCCACTCAACGTCAGAATATC TCACAAAATGGCGATTACTGGACCCTTGCCTTGGAAAAAAAGAATCGTCG TGCTGTTTTCGTCGAATTGGCGTACATTGAGATTGTAGGTATGCGATATG GATCGGGTGGCTGAGATGTGCGAGCAGCGAGGGATAACTTTGGTAGAGGA CTGCGCTCACGGATGCGGGGTCAAATGGCGCGGGCGACAGCTCGGCTACC ACGCAAAGGTGAGCTGTCAAAAAAGTATCTCAAGCATGTAAGGCGGCGGT AGACTAAAGGAGCAAGGTACCAAGCAAGGCGCCTCGAAGTCAAAATAGAG TGATAAAACTATGATGTCCATACAGAGTGTTGGACTATGATGTCCATACA CGTGTGAACTAGATATTATATAATAACCGTCTCCGTTTATTAGATTATCC GCCCCATTGCTTTCATTTACAGTATCATCGTATAATCCCTGTGGCGTTGT CGTGAATCAATCGCATGCTTTCAGGCTGCTTGTTACTCGACTCAATCGGA CAAAGTCATCAACTCTGGAGAGGGTGGCTTCGTGACAACGTCGGATGACG ATATTGCCGCGAGGGCCATCTTCCTTTCTGGCGCGTACGAAACGCGATTC TGTGAGTTGTTTTGAGTTACCCGCGGTTGCGGCTCTGGAAAAACGATAAT GAACACTAAGTAGCTTTAATAATGTTTTTATTTTTTTATTTTTTTAATCT CACTTATAGCCGATGGACCTCATAATTACCATCCTGCCTGTGGTCACAAA GGATCTTCCCATCTCTCCCCGGTTCACGCCTTTCAATTTTTTATCGCGAT GCAAGTTCAGTACTCTTACAGCTCGTCAACCAATGGTTGCTGACTAGTAT ATACGTATATTAGCGTATAGCAGTGCGGCGGGCTAAGGATCGCCAACGTG TGCTCCAATATTTTGCATAGCGTGAATTAGTGACCGGTCGCCCCGGTAGC TCAGAGGTAACCTCGTAACCTTCTGACGCGTTGCGACGTGAGTTCGATCC CGGCAAACGGGATTTTTCTCACTAAAACCTAAAAAAAAAAAAAAAATGCC CAAAGAATGGAAAACGATTAAATAATTAGCACACAAAATTCGACTTCACG GTCGACGAGGGAAAGAAATGGCTGACTCCTTCTCGCGAGAAAAATTAAGG CACGTACCGCAGAAGGAAGGTGGATGAGAAATCCTGTGTGACCTTCCTCC TGTGTGACCCCGGCTGGTACGTCCAACTTGATGTCCAGAATGAATGGGAA GAAAACACACACACACACACACACACACACACACACACCAATATTTTGCA TAGCGTGAATTAGTCGTGGTGTACTATTTTCAAAAAGAATGCTGCGACTG TCGAGGTATCGACTAATCGCTAGAGGTTCAAAGTTGGCCGCGTTCCCCAG TCCGTCTCGCAGGAGCCCCCTCCTGGCGCGGAGACATTGTCCACTGGATT TCACGCAGTGCGTATTAATAATACCGATTTTCCATGTGCTGCCTGGCGTC GTACTGCACCTCGCAGCGAAGCACCTCATGCGCCCGTCGGACGCCCTGTG CGAAGCGTACATGTTGGCCGTGCCAAACCTCTCCGTCCGAATGAGTGAAA TCACCGCTGCGGTATTGAGACCGCTGATCAAGAATTTGCCGGAGAGGGTG GTCGAGTACAACCGCAAGTACCAACTGGTAACGGTAACTGATGAGTAGTG TCGCAAGTGCTTTTTCACCCAGCTCGATAGCGTTACCTTTGAATAGACTT GCAGTCGCTTTTGGCGGCAATCTAAGTGCGATCGGTTCCGCGTACAAAAC TACCCCTTTTTTTGCTGAGCGCCGGAACGGGCTCAAGCTATCTCCGCGTG ACGCTGTGGCATGACCAGGTGGTGAATGCGATCGAGGCGGGGGCGGAGGG ATTGATCGAGGTGCCACGGCAGGATGAGCGCGTTGACGGGGTCGGCGATC ATCTCAACTTCCGGCTCATCCGCGCTTCGGAAGAGGAAAACCTCTCGTTC CGGGTAAGGCTTGTCAATGTGGTTCGCGGTAACGCTTCATCTTTCGGAGG AGCACTTGATGCATGGGTACGTTGCCTCATGATTCAGATATAATATGATA TCGTATCATCGCATGTTTACATTAATAGTCAATTTTTGTGAAAGCTTGGT ACTGTTACAGCAGTAGGTCAGATACCCAAGCCAAACGAGACATAAATAAA GTTCTTAGGATAAGAATACTGTAATATGATTGGGACCGAACGAGCTATAG CACGGGGGAGGCACAACAAAATTCTTAGAATACTTTTCTTTGGCCGCCTT TCCGCGCCTATATTTTCCTGACGTCAGACCATGTGCAAAGATCTCGGGGT GCCCGTGAGTTGGCTGCGTTCCTCGTTGAATGCCCGCTGGCACGTCAATT GGCGAGGCTTCGGAGGACCGGTGCAAGACTTGCCGGCCACTGACCGAGCG CTTGCTACGGCGTACGATCTCAAGCTTCCGCCTCATTTCAATGACGAGGA TATGGTGCACGTGGGGGAGATTATCGCCCACGCGGCGCGAGCGACGATCA GGAGTCACCGGGACTAA
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig815:275085..283151+

>mRNA_F-serratus_M_contig815.19571.1 ID=mRNA_F-serratus_M_contig815.19571.1|Name=mRNA_F-serratus_M_contig815.19571.1|organism=Fucus serratus male|type=CDS|length=2430bp|location=Sequence derived from alignment at F-serratus_M_contig815:275085..283151+ (Fucus serratus male)
CCTGTGCCCCGCATCTTTGTGAAAGACTTTACGCGCCCGATTAGTATTCC
GGACGAGGGCATCGACGCTATCGTTGACGTATGTCGCAGCGGGAGGCTGT
TCCGATACAGCAGTGAGTCCGCCGAAGTGTCCCAGGTAGCGCTCGCCGAG
AAAGAGATGGCTGCCATGACCCAGGCACGTTACGCGCTGGGCGTGAACTC
GTGCTCGTCGGCAATCCTTATCGCTCTGCGGGCCGTGGGCTTGAAGCCGG
GGGACAAGGTTCTCACGAATGCTTTTACGTTCACTGCAGTGACGTCGACT
TTACTGCGGCTGGGCGCAGATCCGATCTTGGTGGAGTGCTGCGACAGCCT
GTGCCCCGCATCTTTGTGAAAGACTTTACGCGCCCGATTAGTATTCCGGA
CGAGGGCATCGACGCTATCGTTGACGTATGTCGCAGCGGGAGGCTGTTCC
GATACAGCAGTGAGTCCGCCGAAGTGTCCCAGGTAGCGCTCGCCGAGAAA
GAGATGGCTGCCATGACCCAGGCACGTTACGCGCTGGGCGTGAACTCGTG
CTCGTCGGCAATCCTTATCGCTCTGCGGGCCGTGGGCTTGAAGCCGGGGG
ACAAGGTTCTCACGAATGCTTTTACGTTCACTGCAGTGACGTCGACTTTA
CTGCGGCTGGGCGCAGATCCGATCTTGGTGGAGTGCTGCGACAGCTGGAC
CATGGACCTCGACGACTTAGAGGAGAAGGCTAGCAGCAGCGGCGCCAAGT
TCCTCCTTTTATCGCACATGCGCGGCAAGCTGGACCATGGACCTCGACGA
CTTAGAGGAGAAGGCTAGCAGCAGCGGCGCCAAGTTCCTCCTTTTATCGC
ACATGCGCGGCAAGGTATGCGATATGGATCGGGTGGCTGAGATGTGCGAG
CAGCGAGGGATAACTTTGGTAGAGGACTGCGCTCACGGATGCGGGGTCAA
ATGGCGCGGGCGACAGCTCGGCTACCACGCAAAGGTATGCGATATGGATC
GGGTGGCTGAGATGTGCGAGCAGCGAGGGATAACTTTGGTAGAGGACTGC
GCTCACGGATGCGGGGTCAAATGGCGCGGGCGACAGCTCGGCTACCACGC
AAAGGCTGCTTGTTACTCGACTCAATCGGACAAAGTCATCAACTCTGGAG
AGGGTGGCTTCGTGACAACGTCGGATGACGATATTGCCGCGAGGGCCATC
TTCCTTTCTGGCGCGTACGAAACGCGATTCTGCTGCTTGTTACTCGACTC
AATCGGACAAAGTCATCAACTCTGGAGAGGGTGGCTTCGTGACAACGTCG
GATGACGATATTGCCGCGAGGGCCATCTTCCTTTCTGGCGCGTACGAAAC
GCGATTCTCGAAGCACCTCATGCGCCCGTCGGACGCCCTGTGCGAAGCGT
ACATGTTGGCCGTGCCAAACCTCTCCGTCCGAATGAGTGAAATCACCGCT
GCGGTATTGAGACCGCTGATCAAGAATTTGCCGGAGAGGGTGGTCGAGTA
CAACCGCAAGTACCAACTGCGAAGCACCTCATGCGCCCGTCGGACGCCCT
GTGCGAAGCGTACATGTTGGCCGTGCCAAACCTCTCCGTCCGAATGAGTG
AAATCACCGCTGCGGTATTGAGACCGCTGATCAAGAATTTGCCGGAGAGG
GTGGTCGAGTACAACCGCAAGTACCAACTGGTGGTGAATGCGATCGAGGC
GGGGGCGGAGGGATTGATCGAGGTGCCACGGCAGGATGAGCGCGTTGACG
GGGTCGGCGATCATCTCAACTTCCGGCTCATCCGCGCTTCGGAAGAGGAA
AACCTCTCGTTCCGGGTGGTGAATGCGATCGAGGCGGGGGCGGAGGGATT
GATCGAGGTGCCACGGCAGGATGAGCGCGTTGACGGGGTCGGCGATCATC
TCAACTTCCGGCTCATCCGCGCTTCGGAAGAGGAAAACCTCTCGTTCCGG
ACCATGTGCAAAGATCTCGGGGTGCCCGTGAGTTGGCTGCGTTCCTCGTT
GAATGCCCGCTGGCACGTCAATTGGCGAGGCTTCGGAGGACCGGTGCAAG
ACTTGCCGGCCACTGACCGAGCGCTTGCTACGGCGTACGATCTCAAGCTT
CCGCCTCATTTCAATGACGAGGATATGGTGCACGTGGGGGAGATTATCGC
CCACGCGGCGCGAGCGACGATCAGGAGTCACCGGGACTAAACCATGTGCA
AAGATCTCGGGGTGCCCGTGAGTTGGCTGCGTTCCTCGTTGAATGCCCGC
TGGCACGTCAATTGGCGAGGCTTCGGAGGACCGGTGCAAGACTTGCCGGC
CACTGACCGAGCGCTTGCTACGGCGTACGATCTCAAGCTTCCGCCTCATT
TCAATGACGAGGATATGGTGCACGTGGGGGAGATTATCGCCCACGCGGCG
CGAGCGACGATCAGGAGTCACCGGGACTAA
back to top