mRNA_F-serratus_M_contig815.19564.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig815.19564.1
Unique NamemRNA_F-serratus_M_contig815.19564.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig815.19564.1 vs. uniprot
Match: A0A6H5JJX6_9PHAE (PDZ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJX6_9PHAE)

HSP 1 Score: 631 bits (1627), Expect = 1.690e-220
Identity = 331/428 (77.34%), Postives = 374/428 (87.38%), Query Frame = 3 
Query:  321 RVMISTLLTTVVLLTGIVPSYELENRQTSLDQPSTSRAVPSWGLRTAGAATFNDAQRAIAETWRTVDRLYVDRTFGGQDWFSVRQKALKEAKKGLTEAELNAALSNMLAPLGDRYTRYLPPAKYDTIVQSSSGDVAGVGVSLSTDIGRDLPLIVGVESGTPAAEAGLKAGDLLVQISGEDCRGLAPDDAAALLRGTENTRVGLVAERPARAAVGNDGVGPTGGEKLDLIVTRRKFKVEGVIPKEVNINGQSIGIVRIKSFSSNTAQDVRNAVERFKSKGVDRIVVDLRGNVGGLLPGGIDTAGLFLDSGKDVVFIIRKNGSVEARSTLAKGPNAQGPPLAILVDKGTASAAEVFAAAVRENDRATLVGERTFGKGVIQTVEPLNSGGGVAVTVARYETPLHHDINKVGIPVDRTIDCPADRDSAECDI 1604
            + ++S+LL   V+LTG+VP  E+++ + +  + + ++ V S G+  A A+TFN  Q AIAETWRTVDRLYVDRTFGGQDWF +RQ+ +K+A KG+TE++LN+ALS MLA LGDRYTRYLPPAKY TIVQSSSGDVAGVGVSLS D GRDLPLIVGVESGTPAAEAGL+AGDLL+QISG++CRGLAPDDAAALLRGTENT+VG+VAERPA     +DG G   GEKLDLIVTRRKFKVEGVIP+EV +NG+ IGIVRIKSFSSNTA DV+ AVERFKS GV RIVVDLRGNVGGLLPGGIDTAGLFLDSGKDVVFIIRKNGSVE R+TL  GP AQG PL +LVDKGTASAAEVFAAAVRENDRA LVGERTFGKGVIQTVEPL +GGGVAVTVARYETPLHH+INKVGIPVD+ I+CPA RD+AECDI
Sbjct:   22 KAVLSSLLAVSVILTGVVPGLEVKSPRPT-GRNTVTQVVASAGVPNAAASTFNTEQAAIAETWRTVDRLYVDRTFGGQDWFGLRQQNIKDAAKGMTESDLNSALSKMLASLGDRYTRYLPPAKYATIVQSSSGDVAGVGVSLSVDGGRDLPLIVGVESGTPAAEAGLQAGDLLLQISGDECRGLAPDDAAALLRGTENTKVGIVAERPA-----SDGAG---GEKLDLIVTRRKFKVEGVIPREVTVNGRKIGIVRIKSFSSNTAGDVKAAVERFKSSGVSRIVVDLRGNVGGLLPGGIDTAGLFLDSGKDVVFIIRKNGSVEGRTTLEAGPQAQGLPLTLLVDKGTASAAEVFAAAVRENDRAMLVGERTFGKGVIQTVEPLTNGGGVAVTVARYETPLHHNINKVGIPVDKEIECPASRDAAECDI 440
[Close]
BLAST of mRNA_F-serratus_M_contig815.19564.1 vs. uniprot
Match: D7FU05_ECTSI (D1 carboxyterminal protease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU05_ECTSI)

HSP 1 Score: 412 bits (1060), Expect = 9.540e-137
Identity = 216/262 (82.44%), Postives = 233/262 (88.93%), Query Frame = 3 
Query:  819 LKAGDLLVQISGEDCRGLAPDDAAALLRGTENTRVGLVAERPARAAVGNDGVGPTGGEKLDLIVTRRKFKVEGVIPKEVNINGQSIGIVRIKSFSSNTAQDVRNAVERFKSKGVDRIVVDLRGNVGGLLPGGIDTAGLFLDSGKDVVFIIRKNGSVEARSTLAKGPNAQGPPLAILVDKGTASAAEVFAAAVRENDRATLVGERTFGKGVIQTVEPLNSGGGVAVTVARYETPLHHDINKVGIPVDRTIDCPADRDSAECDI 1604
            +KAGDLL+QISG++CRGLAPDDAAALLRGTENT+VG+VAERPA         G   GEKLDLIVTRRKFKVEGVIP+E  +NG+ IGIVRIKSFSSNTA DV+ AVERFKS GV RIVVDLRGNVGGLLPGGIDTAGLFLDSGKDVVFIIRKNGSVE R+TL  GP AQG PL +LVDKGTASAAEVFAAAVRENDRA LVGERTFGKGVIQTVEPL +GGGVAVTVARYETPLHH+INKVGIPVD+ I+CPA RD+AECDI
Sbjct:   61 VKAGDLLLQISGDECRGLAPDDAAALLRGTENTKVGIVAERPAS--------GGAAGEKLDLIVTRRKFKVEGVIPREATVNGRKIGIVRIKSFSSNTAGDVKAAVERFKSSGVSRIVVDLRGNVGGLLPGGIDTAGLFLDSGKDVVFIIRKNGSVEGRTTLEAGPQAQGLPLTLLVDKGTASAAEVFAAAVRENDRAMLVGERTFGKGVIQTVEPLTNGGGVAVTVARYETPLHHNINKVGIPVDKEIECPASRDAAECDI 314
[Close]
BLAST of mRNA_F-serratus_M_contig815.19564.1 vs. uniprot
Match: A0A7S3UUH8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UUH8_HETAK)

HSP 1 Score: 350 bits (898), Expect = 1.550e-110
Identity = 195/379 (51.45%), Postives = 248/379 (65.44%), Query Frame = 3 
Query:  465 AATFNDAQRAIAETWRTVDRLYVDRTFGGQDWFSVRQKALKEAKKGLTEAELNAALSNMLAPLGDRYTRYLPPAKYDTIVQSSSGDVAGVGVSLSTDIGRDLPLIVGVESGTPAAEAGLKAGDLLVQISGEDCRGLAPDDAAALLRGTENTRVGLVAERPARAAVGNDGVGPTGGEKLDLIVTRRKFKVEGVIPK-EVNINGQSIGIVRIKSFSSNTAQDVRNAVERFKSKGVDRIVVDLRGNVGGLLPGGIDTAGLFLDSGKDVVFIIRKNGSVEARSTLAKGPNAQGPPLAILVDKGTASAAEVFAAAVRENDRATLVGERTFGKGVIQTVEPLNSGGGVAVTVARYETPLHHDINKVGIPVDRTIDCPADRDSAEC 1598
            AA   D Q+ IA TWR VD+LYVDRTF G DWF VRQ A+K+  K + EA    A+  +L  LGD YTR+L P+KY T+V S++G+VAG+GV L+ D       +  V+  +PA  AGLK GDLLV +S E  +   PDD A  LRG   TRVGL A RP             GG  L+LIV R K K+ GV    E   +G+ +G++++KSFSSNTA+DVR A+   +++G    V+DLRGN GGLLPGG+DTA LFL  G+ VV++I K+G V+A++  A GP     PL + VD  TASAAEV AAA+REN RA LVG++TFGKGVIQT+E L    GVAVT+A+YETP  ++INKVGIPVD   DC A   +  C
Sbjct:   79 AAELTDEQKLIASTWRLVDKLYVDRTFNGLDWFKVRQDAVKKKYKSVDEAY--EAIDKILGQLGDPYTRFLVPSKYRTLVNSATGEVAGIGVELTIDPDTKFVSLADVQPNSPAERAGLKPGDLLVDVSAETTKNEVPDDTALRLRGPPGTRVGLTARRP-------------GGGDLELIVGREKVKIVGVRSSLETAPSGKKLGVIKVKSFSSNTAEDVRRALTDLRAQGAAEFVLDLRGNAGGLLPGGVDTARLFLREGQGVVYVISKSGVVDAQAAAADGPEVD-TPLLVAVDGRTASAAEVVAAALRENGRAKLVGKKTFGKGVIQTIEGLQGDAGVAVTIAKYETPKRNNINKVGIPVDVEFDCKATDPTLSC 441
[Close]
BLAST of mRNA_F-serratus_M_contig815.19564.1 vs. uniprot
Match: K0S7S3_THAOC (PDZ domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S7S3_THAOC)

HSP 1 Score: 331 bits (849), Expect = 7.850e-103
Identity = 190/383 (49.61%), Postives = 245/383 (63.97%), Query Frame = 3 
Query:  459 AGAATFNDAQRAIAETWRTVDRLYVDRTFGGQDWFSVRQKALKEAKKGLTEAELNAALSNMLAPLGDRYTRYLPPAKYDTIVQSSSGDVAGVGVSLSTDIGRDLPLIVGVESGTPAAEAGLKAGDLLVQISGE--DCRGLAPDDAAALLRGTENTRVGLVAERPARAAVGNDGVGPTGGEKLDLIVTRRKFKVEGVIPKEVNINGQS-IGIVRIKSFSSNTAQDVRNAVERFKSKGVDRIVVDLRGNVGGLLPGGIDTAGLFLDSGKDVVFIIRKNGSVEARSTLAKGPNAQGPPLAILVDKGTASAAEVFAAAVRENDRATLVGERTFGKGVIQTVEPLNSG--GGVAVTVARYETPLHHDINKVGIPVDRTIDCPADRDSA 1592
            A   +F   Q+ IAE+WR VD  Y+DRTF  QDWF VRQ ALK+  K   EA+    + +ML  LGDRYTRYLPPAKYD+IV +++G+V GVGV LS D  R   +   VE   PAA  GL  GD  V++ G   D     PDD A ++RG E ++VG+V ER               G+ +D I+TR   K+  V     +  G   +G+VRIKSFS  TA+ V++ +E  K KG  R+V+DLRGN GGLLPGG+DTA LFL++ K VVF+  K G V+A+STL  G + +  P+ +LVDK TASAAEV  A ++EN RAT+ GE+TFGKG++QT+  L  G  GG+AVT+ARYETPLH+DINK GIPVD   D    +D A
Sbjct:  100 ADYGSFTPEQKFIAESWRIVDNAYIDRTFNHQDWFKVRQDALKKKYKSFAEAQTE--VESMLGSLGDRYTRYLPPAKYDSIVNAATGNVFGVGVELSQDKDRGRVVAGDVEPTGPAARGGLLPGDEFVEVDGVRFDDGKATPDDVAVVVRGPEGSKVGVVIERA--------------GKTVDFILTREPIKITSVRSYLGDKPGVGKVGVVRIKSFSGTTAETVKSELEGLKKKGATRLVLDLRGNPGGLLPGGVDTASLFLEANKPVVFVADKKGVVDAQSTLVDGIDLE-TPMVLLVDKNTASAAEVMTACLKENKRATVAGEQTFGKGIVQTIRQLEGGENGGIAVTLARYETPLHNDINKSGIPVDVQADVTCGKDDA 465
[Close]
BLAST of mRNA_F-serratus_M_contig815.19564.1 vs. uniprot
Match: A0A1Z5KPD1_FISSO (Carboxyl-terminal processing protease n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KPD1_FISSO)

HSP 1 Score: 316 bits (810), Expect = 6.330e-98
Identity = 179/385 (46.49%), Postives = 245/385 (63.64%), Query Frame = 3 
Query:  471 TFNDAQRAIAETWRTVDRLYVDRTFGGQDWFSVRQKALKEAKKGLTEAELNAALSNMLAPLGDRYTRYLPPAKYDTIVQSSSGDVAGVGVSLSTDIGRDLPLIVGVESGTPAAEAGLKAGDLLVQISGE--DCRGLAPDDAAALLRGTENTRVGLVAERPARAAVGNDGVGPTGGEKLDLIVTRRKFKVEGVIPKEVNINGQSIG---IVRIKSFSSNTAQDVRNAVERFKSKGVDRIVVDLRGNVGGLLPGGIDTAGLFLDSGKDVVFIIRKNGSVEARSTLAKGPNAQGPPLAILVDKGTASAAEVFAAAVRENDRATLVGERTFGKGVIQTVEPLNSG--GGVAVTVARYETPLHHDINKVGIPVD--RTIDCPADRDSAEC 1598
            + +D Q+ +AE WR VD  ++DRTF G+DWF +R++ + + +K  T AE   ++  M+A LGD+YTRYL PAKY +IV S++G +AG+GV + TD       +  VE  +PA +AGLK GD  ++  G   D +   PDD A  LRG   ++VG+VAER               G+ LDLI+TR+   +  V     N N   +G   ++R+K+FS  TA  V   +   K KG    V+D+RGN GGLLPGG+DTA LFLD+ K +VF++ K G V+A+S+LA G     P L +LVDK TASAAEVF AA++EN RA + GE+TFGKG++QT+  L+ G  GG+A+TVARYETP HHDINK GIPVD   ++ CP D D+  C
Sbjct:   30 SLSDEQKLVAEAWRLVDNSFLDRTFNGEDWFQLRERYVHQ-QKYKTMAEAQDSIEQMVAKLGDKYTRYLSPAKYQSIVDSATGTLAGIGVQIGTD-DTGFVAVADVEPNSPAEQAGLKVGDKFLEADGLRFDVK-TTPDDVALKLRGPVGSKVGVVAERD--------------GKTLDLILTRQPITITAVRSYLSNTNVPGVGKVGVIRVKNFSGTTASTVATELTDLKKKGAQAFVIDVRGNPGGLLPGGVDTASLFLDTNKPLVFVVNKKGVVDAQSSLAAGMELDAP-LVVLVDKNTASAAEVFTAALQENGRAVIAGEQTFGKGIVQTIRELSGGTNGGLAITVARYETPQHHDINKSGIPVDVKTSVACPKD-DAVAC 395
[Close]
BLAST of mRNA_F-serratus_M_contig815.19564.1 vs. uniprot
Match: A0A4D9CRG9_9STRA (PDZ domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CRG9_9STRA)

HSP 1 Score: 318 bits (815), Expect = 1.420e-97
Identity = 179/406 (44.09%), Postives = 250/406 (61.58%), Query Frame = 3 
Query:  405 SLDQPSTSRAVPSWGLRTAG--------AATFNDAQRAIAETWRTVDRLYVDRTFGGQDWFSVRQKALKEAKKGLTEAELNAALSNMLAPLGDRYTRYLPPAKYDTIVQSSSGDVAGVGVSLSTDIGRDLPLIVGVESGTPAAEAGLKAGDLLVQISGEDCRGLAPDDAAALLRGTENTRVGLVAERPARAAVGNDGVGPTGGEKLDLIVTRRKFKVEGVIPKEVNINGQSIGIVRIKSFSSNTAQDVRNAVERFKSKGVDRIVVDLRGNVGGLLPGGIDTAGLFLDSGKDVVFIIRKNGSVEARSTLAKGPNAQGPPLAILVDKGTASAAEVFAAAVRENDRATLVGERTFGKGVIQTVEPLNSGGGVAVTVARYETPLHHDINKVGIPVDRTIDCPADRDSAEC 1598
            +L  P T   +   GL + G        AA   D Q+ +A+ W+ VD+L++DRTF GQDWF++RQ ALK+  K  T A++   +  ML PLGD YTR+LPP++YD++   ++G VAGVGVSL  D          VE G+PA  AGL+AGD L+ + G+   GL  DD A LLRG   T+VG+VA                GGE  D+I+TR+  K++ V     N  G+ +G++RI+SFS  TA  V   +E+ +++G+  +V+DLRGN GG L GGIDTA LFL + + +V ++ K G VE   T  +G      PL ++VDK TASA+EV +AA++EN+RA LVGE+TFGKGV+QT+E +    GV+VT+A Y TPL ++INK GI VD    C A   + +C
Sbjct:  100 ALWSPPTPEQLAPLGLNSLGSTATVSQAAAGLTDEQQLVADVWKRVDKLFLDRTFNGQDWFALRQAALKKPYK--TTAQVYEGIKAMLEPLGDPYTRFLPPSQYDSLFGLATGSVAGVGVSLQIDPATQELTAAEVEKGSPAEAAGLRAGDKLLYVDGQATTGLLVDDCANLLRGPAGTKVGVVARGK-------------GGESKDVIITRQLIKIQSVEALTANKGGKKVGVIRIRSFSQTTADTVAAELEKLENEGISAVVIDLRGNPGGFLGGGIDTARLFLPAYEKIVSVVGKTGIVEEYQTTDEGRETS-KPLFVVVDKRTASASEVLSAALKENNRAKLVGEKTFGKGVVQTIEQVGQNAGVSVTIAAYSTPLGNNINKKGIDVDIPSTCEATDKAVQC 489
[Close]
BLAST of mRNA_F-serratus_M_contig815.19564.1 vs. uniprot
Match: B5Y3E3_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y3E3_PHATC)

HSP 1 Score: 314 bits (805), Expect = 2.440e-96
Identity = 178/381 (46.72%), Postives = 243/381 (63.78%), Query Frame = 3 
Query:  471 TFNDAQRAIAETWRTVDRLYVDRTFGGQDWFSVRQKALKEAKKGLTEAELNAALSNMLAPLGDRYTRYLPPAKYDTIVQSSSGDVAGVGVSLSTDIGRDLPLIVGVESGTPAAEAGLKAGDLLVQISGEDCRGLA-PDDAAALLRGTENTRVGLVAERPARAAVGNDGVGPTGGEKLDLIVTRRKFKVEGVIPKEVNINGQS-IGIVRIKSFSSNTAQDVRNAVERFKSKGVDRIVVDLRGNVGGLLPGGIDTAGLFLDSGKDVVFIIRKNGSVEARSTLAKGPNAQGPPLAILVDKGTASAAEVFAAAVRENDRATLVGERTFGKGVIQTVEPLN-SGGGVAVTVARYETPLHHDINKVGIPVD--RTIDCPADRDSAEC 1598
            +F   Q+ +AE WR VD  ++DRTF GQDWF +RQK +K+  K + EA    A+  M+  LGDRYTRYL PAKY ++V S++G +AGVGV +ST+    + +   VE  +PA  +G++  D+ +++ G    G A PDD A  LRG E +RVG+V ER               G+ +D I+TR +  V  V     N+     +G++RIKSFS  TA  V    +  K KG   +V+D+RGN GGLLPGG+DTA LFL++ K VVF++ K G V+A++TLA G +    PL ILVD GTASAAEVF AA++EN RA + GE +FGKG++QT+  L+ + GG+A+TVARYETP HHDINK GI  D   ++DC A  D+  C
Sbjct:  107 SFTPEQKVVAEAWRLVDNSFLDRTFNGQDWFQLRQKYVKQKYKNMAEAR--DAIDTMVGSLGDRYTRYLSPAKYQSLVDSATGTLAGVGVEISTNKAGKI-MASDVEDNSPAKNSGIQPNDVFLEVDGIQFDGKATPDDVALRLRGPEGSRVGVVMERD--------------GKTIDFILTRERITVTSVKSYLSNVPSVGKVGVIRIKSFSGTTAATVAEQFKDLKKKGAQSVVIDVRGNPGGLLPGGVDTAALFLEANKPVVFVVNKQGVVDAQATLADGIDVD-TPLVILVDSGTASAAEVFTAALQENKRAVVAGETSFGKGIVQTIRALSDNNGGLAITVARYETPEHHDINKRGILADVATSVDC-AKADATSC 468
[Close]
BLAST of mRNA_F-serratus_M_contig815.19564.1 vs. uniprot
Match: A0A7S1UM64_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UM64_9STRA)

HSP 1 Score: 308 bits (789), Expect = 5.180e-94
Identity = 177/395 (44.81%), Postives = 243/395 (61.52%), Query Frame = 3 
Query:  432 AVPSWGLRTAGAATFNDAQRAIAETWRTVDRLYVDRTFGGQDWFSVRQKALKEAKKGLTEAELNAALSNMLAPLGDRYTRYLPPAKYDTIVQSSSGDVAGVGVSL-STDIGRDLPLIVGVESGTPAAEAGLKAGDLLVQISGE--DCRGLAPDDAAALLRGTENTRVGLVAERPARAAVGNDGVGPTGGEKLDLIVTRRKFKVEGVIPKEVNINGQS-IGIVRIKSFSSNTAQDVRNAVERFKSKGVDRIVVDLRGNVGGLLPGGIDTAGLFLDSGKDVVFIIRKNGSVEARSTLAKGPNAQGPPLAILVDKGTASAAEVFAAAVRENDRATLVGERTFGKGVIQTVEPL-NSGGGVAVTVARYETPLHHDINKVGIPVDRTIDCPADR-DSAEC 1598
            ++P      A   +  D Q A+AE WR VD  Y+DR+F GQDWF +RQ A+K   K + +A    A+  M+A LGD+YTRYL P+KY +IV S++G +AGVG  + +T  GR    +  VE  +PA+ +G++  D+ +++ G   D     PDD A  LRG E ++VG+  ER               G++ D I+TR+   +  V     +  G   +G+++IKSFS  TA+ V+  +E  K KG   IV DLR N GGLLPGG DTA LFL     +VF++ K G +EA+ T   G + +  PL +LVD  TASA+EV  AA++EN RAT+ GE+TFGKG+IQTV+PL NS GG+AVTVARYETP HHDINK GIPVD +     D+ D++ C
Sbjct:   85 SLPHPAALAADYGSLTDEQMAVAEAWRLVDNSYLDRSFNGQDWFKIRQDAVKAKYKDINQAR--GAIDKMVASLGDKYTRYLSPSKYQSIVDSATGTLAGVGCEIGTTKDGR--VFVADVEPNSPASLSGIQPKDVFIEVDGSRFDDPKATPDDVAIKLRGPEGSKVGVTIER--------------NGKESDFIITRQPITITSVKSYMTDKTGVGKVGVIKIKSFSGTTAEKVKQELESLKKKGAKSIVFDLRSNPGGLLPGGTDTASLFLQKDSPLVFVVSKTGVIEAQETFTDGIDLE-TPLVVLVDSNTASASEVMTAALQENGRATVAGEQTFGKGIIQTVKPLSNSNGGIAVTVARYETPQHHDINKRGIPVDVSTKVDCDKLDASAC 460
[Close]
BLAST of mRNA_F-serratus_M_contig815.19564.1 vs. uniprot
Match: A0A448YU93_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YU93_9STRA)

HSP 1 Score: 300 bits (768), Expect = 9.220e-91
Identity = 167/377 (44.30%), Postives = 240/377 (63.66%), Query Frame = 3 
Query:  468 ATFNDAQRAIAETWRTVDRLYVDRTFGGQDWFSVRQKALKEAKKGLTEAELNAALSNMLAPLGDRYTRYLPPAKYDTIVQSSSGDVAGVGVSLSTDIGRDLPLIVGVESGTPAAEAGLKAGDLLVQISGEDC-RGLAPDDAAALLRGTENTRVGLVAERPARAAVGNDGVGPTGGEKLDLIVTRRKFKVEGVIPKEVNINGQSIGIVRIKSFSSNTAQDVRNAVERFKSKGVDRIVVDLRGNVGGLLPGGIDTAGLFLDSGKDVVFIIRKNGSVEARSTLAKGPNAQGPPLAILVDKGTASAAEVFAAAVRENDRATLVGERTFGKGVIQTVEPLNSG-GGVAVTVARYETPLHHDINKVGIPVDRTIDCPADRDSA 1592
            A F   Q+ + E WRTVD  YVDRTF GQDWF +RQ  +K+  + + EA+   A++ M++ LGD+YT+YL PAKY ++V +++G +AGVGV ++T+   ++P++  VE  +PA +AGL   D+ V+  G    +   PDD A  LRG   ++VG+   R               G   D I+ R    V  V       N +++G++RIKSFS  T+  V+ AV+  K KG  +I++DLR N GGLLPGG++TA LFL+S K +V+++   G + A ST   G + +   L ILVD  TASAAEVF AA++EN RAT++GE+TFGKG+IQT+  L+ G GG++VTVARYETP H++INK GI VD+ +D    +D+A
Sbjct:  119 AAFTPEQKLVTEAWRTVDSTYVDRTFNGQDWFKMRQDLVKKKYRSMDEAQ--DAVAKMMSTLGDKYTKYLTPAKYQSLVDTATGTLAGVGVEIATNK-DEIPIVSDVEPNSPAQKAGLLPKDVFVEGGGAKFDKSSTPDDVALRLRGPVGSKVGITVLRD--------------GATKDFIIERAPITVTSVRSYIAQSN-KNVGVIRIKSFSGTTSSTVKEAVQELKKKGAKQILIDLRSNPGGLLPGGVETAQLFLESNKQIVYVVSNKGVILAESTFEDGFDTE-TKLTILVDHNTASAAEVFTAAMKENGRATVIGEQTFGKGIIQTIRELSDGNGGLSVTVARYETPNHNNINKSGIAVDKAVDVECPKDNA 476
[Close]
BLAST of mRNA_F-serratus_M_contig815.19564.1 vs. uniprot
Match: A0A1E7FHA2_9STRA (C-terminal processing peptidase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FHA2_9STRA)

HSP 1 Score: 291 bits (745), Expect = 1.120e-88
Identity = 172/385 (44.68%), Postives = 240/385 (62.34%), Query Frame = 3 
Query:  459 AGAATFNDAQRAIAETWRTVDRLYVDRTFGGQDWFSVRQKALKEAKKGLTEAELNAALSNMLAPLGDRYTRYLPPAKYDTIVQSSSGDVAGVGVSLSTDIGRDL-PLIVGVESGTPAAEAGLKAGDLLVQISGEDC-RGLAPDDAAALLRGTENTRVGLVAERPARAAVGNDGVGPTGGEKLDLIVTRRKFKVEGVIPKEVNINGQSIGIVRIKSFSSNTAQDVRNAVERFKSKGVDRIVVDLRGNVGGLLPGGIDTAGLFLDSGKDVVFIIRKNGSVEARSTLAKGPNAQGPPLAILVDKGTASAAEVFAAAVRENDRATLVGERTFGKGVIQTVEPLN-SGGGVAVTVARYETPLHHDINKVGIPVDRTID--CPADRDSAEC 1598
            +G  +    Q+  AE WRTVD  ++DRTF GQDWF +RQ  +K   + + +A+   +++NM++ LGD+YT+YLPPAKY ++V +++G +AGVGV ++T+   DL P +  VE  +PA +AGL   D+ ++  G    +   P D A  LRG   ++VG+   R               G K+D I+ R+  KVE V       N Q +G++RIKSFS  T   V++AV   K KG   I+ DLR N GGLLPGG +TA LFL++ K  +F++   G ++A+ T   G + +   L ILVD  TASAAEVF AA++EN RA +VGE+TFGKG+IQT+  L+ + GGVAVTVARYETP H+DINK GI VD + D  CP D D+  C
Sbjct:   15 SGYTSLTPEQKMAAEAWRTVDSTFLDRTFNGQDWFKLRQNLVKAKYESMEDAQ--DSVTNMMSKLGDKYTKYLPPAKYQSLVDTATGTLAGVGVEIATN--SDLIPCVSDVEPNSPAMKAGLLPKDVFLEGDGAKFDKTSTPVDVALRLRGPVGSKVGVTVLRD--------------GTKIDFIIERQTIKVESVRSYIAKENKQ-VGVIRIKSFSGTTTSSVKDAVLELKKKGATSILFDLRSNPGGLLPGGTETASLFLEANKPTLFVVSNKGVIDAQETFVDGFDTE-TNLVILVDHNTASAAEVFTAALKENGRAKVVGEQTFGKGIIQTIRELSENNGGVAVTVARYETPKHNDINKSGIAVDTSTDVECPKD-DALAC 378
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig815.19564.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJX6_9PHAE1.690e-22077.34PDZ domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FU05_ECTSI9.540e-13782.44D1 carboxyterminal protease n=1 Tax=Ectocarpus sil... [more]
A0A7S3UUH8_HETAK1.550e-11051.45Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
K0S7S3_THAOC7.850e-10349.61PDZ domain-containing protein n=1 Tax=Thalassiosir... [more]
A0A1Z5KPD1_FISSO6.330e-9846.49Carboxyl-terminal processing protease n=2 Tax=Fist... [more]
A0A4D9CRG9_9STRA1.420e-9744.09PDZ domain-containing protein n=2 Tax=Monodopsidac... [more]
B5Y3E3_PHATC2.440e-9646.72Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S1UM64_9STRA5.180e-9444.81Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A448YU93_9STRA9.220e-9144.30Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A1E7FHA2_9STRA1.120e-8844.68C-terminal processing peptidase n=1 Tax=Fragilario... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig815contigF-serratus_M_contig815:39339..49800 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score413.7
Seed ortholog evalue1.3e-112
Seed eggNOG ortholog2880.D7FU05
Preferred nameCTPA
KEGG koko:K03797
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004175,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0009579,GO:0016787,GO:0019538,GO:0031977,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044238,GO:0044424,GO:0044436,GO:0044444,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564
EggNOG free text desc.serine-type peptidase activity
EggNOG OGs2QSWI@2759,COG0793@1
Ec32 ortholog descriptionD1 carboxyterminal protease precursor
Ec32 orthologEc-11_003480.1
EC3.4.21.102
COG Functional cat.M
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002
Exons9
Model size2053
Cds size1542
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932430.1560533-UTR-F-serratus_M_contig815:39338..394031622932430.1560533-UTR-F-serratus_M_contig815:39338..39403Fucus serratus maleUTRF-serratus_M_contig815 39339..39403 +
1690964305.1206377-UTR-F-serratus_M_contig815:39338..394031690964305.1206377-UTR-F-serratus_M_contig815:39338..39403Fucus serratus maleUTRF-serratus_M_contig815 39339..39403 +
1622932430.4111218-UTR-F-serratus_M_contig815:49354..498001622932430.4111218-UTR-F-serratus_M_contig815:49354..49800Fucus serratus maleUTRF-serratus_M_contig815 49355..49800 +
1690964305.2438347-UTR-F-serratus_M_contig815:49354..498001690964305.2438347-UTR-F-serratus_M_contig815:49354..49800Fucus serratus maleUTRF-serratus_M_contig815 49355..49800 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932430.170837-CDS-F-serratus_M_contig815:39403..398471622932430.170837-CDS-F-serratus_M_contig815:39403..39847Fucus serratus maleCDSF-serratus_M_contig815 39404..39847 +
1690964305.1340172-CDS-F-serratus_M_contig815:39403..398471690964305.1340172-CDS-F-serratus_M_contig815:39403..39847Fucus serratus maleCDSF-serratus_M_contig815 39404..39847 +
1622932430.2021153-CDS-F-serratus_M_contig815:44922..450001622932430.2021153-CDS-F-serratus_M_contig815:44922..45000Fucus serratus maleCDSF-serratus_M_contig815 44923..45000 +
1690964305.1456702-CDS-F-serratus_M_contig815:44922..450001690964305.1456702-CDS-F-serratus_M_contig815:44922..45000Fucus serratus maleCDSF-serratus_M_contig815 44923..45000 +
1622932430.2648022-CDS-F-serratus_M_contig815:45370..454901622932430.2648022-CDS-F-serratus_M_contig815:45370..45490Fucus serratus maleCDSF-serratus_M_contig815 45371..45490 +
1690964305.1566482-CDS-F-serratus_M_contig815:45370..454901690964305.1566482-CDS-F-serratus_M_contig815:45370..45490Fucus serratus maleCDSF-serratus_M_contig815 45371..45490 +
1622932430.2877576-CDS-F-serratus_M_contig815:45906..460231622932430.2877576-CDS-F-serratus_M_contig815:45906..46023Fucus serratus maleCDSF-serratus_M_contig815 45907..46023 +
1690964305.1711736-CDS-F-serratus_M_contig815:45906..460231690964305.1711736-CDS-F-serratus_M_contig815:45906..46023Fucus serratus maleCDSF-serratus_M_contig815 45907..46023 +
1622932430.31104-CDS-F-serratus_M_contig815:46562..468171622932430.31104-CDS-F-serratus_M_contig815:46562..46817Fucus serratus maleCDSF-serratus_M_contig815 46563..46817 +
1690964305.1812248-CDS-F-serratus_M_contig815:46562..468171690964305.1812248-CDS-F-serratus_M_contig815:46562..46817Fucus serratus maleCDSF-serratus_M_contig815 46563..46817 +
1622932430.338436-CDS-F-serratus_M_contig815:47722..478931622932430.338436-CDS-F-serratus_M_contig815:47722..47893Fucus serratus maleCDSF-serratus_M_contig815 47723..47893 +
1690964305.1909184-CDS-F-serratus_M_contig815:47722..478931690964305.1909184-CDS-F-serratus_M_contig815:47722..47893Fucus serratus maleCDSF-serratus_M_contig815 47723..47893 +
1622932430.3573246-CDS-F-serratus_M_contig815:48218..483641622932430.3573246-CDS-F-serratus_M_contig815:48218..48364Fucus serratus maleCDSF-serratus_M_contig815 48219..48364 +
1690964305.2012565-CDS-F-serratus_M_contig815:48218..483641690964305.2012565-CDS-F-serratus_M_contig815:48218..48364Fucus serratus maleCDSF-serratus_M_contig815 48219..48364 +
1622932430.3769627-CDS-F-serratus_M_contig815:48792..489001622932430.3769627-CDS-F-serratus_M_contig815:48792..48900Fucus serratus maleCDSF-serratus_M_contig815 48793..48900 +
1690964305.2137487-CDS-F-serratus_M_contig815:48792..489001690964305.2137487-CDS-F-serratus_M_contig815:48792..48900Fucus serratus maleCDSF-serratus_M_contig815 48793..48900 +
1622932430.39469-CDS-F-serratus_M_contig815:49251..493541622932430.39469-CDS-F-serratus_M_contig815:49251..49354Fucus serratus maleCDSF-serratus_M_contig815 49252..49354 +
1690964305.2330875-CDS-F-serratus_M_contig815:49251..493541690964305.2330875-CDS-F-serratus_M_contig815:49251..49354Fucus serratus maleCDSF-serratus_M_contig815 49252..49354 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig815.19564.1prot_F-serratus_M_contig815.19564.1Fucus serratus malepolypeptideF-serratus_M_contig815 39404..49354 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig815.19564.1

>prot_F-serratus_M_contig815.19564.1 ID=prot_F-serratus_M_contig815.19564.1|Name=mRNA_F-serratus_M_contig815.19564.1|organism=Fucus serratus male|type=polypeptide|length=514bp
MSSTRLGRALFAFLLREGLVQSFVPCIIPSARLHPWLPSPTKLRSVAPVE
LSRSPRTHQIMRAASQSPLEEEKEEINKPLPWRSQRVMISTLLTTVVLLT
GIVPSYELENRQTSLDQPSTSRAVPSWGLRTAGAATFNDAQRAIAETWRT
VDRLYVDRTFGGQDWFSVRQKALKEAKKGLTEAELNAALSNMLAPLGDRY
TRYLPPAKYDTIVQSSSGDVAGVGVSLSTDIGRDLPLIVGVESGTPAAEA
GLKAGDLLVQISGEDCRGLAPDDAAALLRGTENTRVGLVAERPARAAVGN
DGVGPTGGEKLDLIVTRRKFKVEGVIPKEVNINGQSIGIVRIKSFSSNTA
QDVRNAVERFKSKGVDRIVVDLRGNVGGLLPGGIDTAGLFLDSGKDVVFI
IRKNGSVEARSTLAKGPNAQGPPLAILVDKGTASAAEVFAAAVRENDRAT
LVGERTFGKGVIQTVEPLNSGGGVAVTVARYETPLHHDINKVGIPVDRTI
DCPADRDSAECDI*
back to top

mRNA from alignment at F-serratus_M_contig815:39339..49800+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig815.19564.1 ID=mRNA_F-serratus_M_contig815.19564.1|Name=mRNA_F-serratus_M_contig815.19564.1|organism=Fucus serratus male|type=mRNA|length=10462bp|location=Sequence derived from alignment at F-serratus_M_contig815:39339..49800+ (Fucus serratus male)
TCGCGCGAGTTTAATTCACGCGCGAGGTCTCTCTATGTGATCGGAGTCCT
AACGCACACAGTTGCATGAGTTCAACGCGTCTTGGTCGCGCGCTTTTTGC
GTTCTTGCTCCGCGAAGGTCTCGTTCAATCCTTTGTACCATGTATAATCC
CATCTGCGCGTTTGCATCCGTGGCTTCCATCGCCGACGAAGCTTCGATCC
GTTGCTCCCGTGGAGCTATCCCGGTCTCCACGCACACACCAGATCATGCG
CGCCGCATCTCAGTCACCACTAGAAGAAGAAAAAGAAGAAATCAACAAGC
CCCTCCCCTGGCGTTCACAGAGGGTCATGATTTCGACGCTGCTGACTACT
GTTGTGCTGCTGACTGGCATCGTGCCAAGTTATGAGTTGGAGAACCGACA
AACGTCATTGGATCAACCGTCAACCTCGCGAGCTGTTCCCAGCTGGGGAC
TGCGCACTGCTGGTGCAGCGACTTTCAATGACGCCCAGAGGGCCATCGCC
GAGACGTGGGTGAGAAAGCTTCTGTACAGACCGGCCACGTTTTTCGAGTT
GTGCAGGGTGCTCTCAGGAAAGTTCTTTCTATCAAATTAGTCTATCATAC
CAGATAAAGGTCCATCAGGCAACATGAACTCGTGTAGTAGTTGTTGTTGT
TTTCTTCACATTAACCGATCGGGCCTCAACCATACCCAGTAATTTACGTG
GTTGCCAATCCGGTACGTGGTCTGCTGGACAGAAAGAGGTCAGAGGAACA
TCTATCAAACACACACACAAAAACGACAAAGAGAAAGGAACAAGGATAAC
AAAATACACATGCAGAAAAGAAAAAAAAAGATAGAAGAGGGACATTCGAG
AGAGAGTTTGGCAAAGAGTCAGCCGCGAGTCATCCTATACCCTCCCGGAT
CGCAACCATGCACCCAAACGCGTAGCATCTACCGCATTCCGTACTCTTGG
GGTTTCAGTTTTCACTAACGGCACAATCGACGTCGCTTAGGGAGTCCTTG
GGTTGGTCCAATCAACGCGGTTCGAAAACGTCTCAAGCTTGCTACAGTCA
CCCCAGGTGCAACCTCAACCTTGTAGTATTATTACTGTAGAAAGTAGGGA
GTAAGACAGGACTGTTATCATCAGTTGTCTCGCGGTCGGCTCAACATGTA
AAATTTGATCTCGCGAGACAGTTTCGGCCGTCCCGTCCGCATCACCTCGC
ACATTCTCCACGCCCAGGCTGCTGTGAATCTAGTTTTTACTCACGGGCTC
CTCTTCATCCTCCCGCTCTCCGTGACTGCGTCTATCTAGACCGCCAACCA
CCATCGGGCCATCAGTTCCGAGTTTACCGAGTCACGTGTTTGCGTACCGA
TGGCGTTCACCGCCGAGTGTCCGCCTGTTGTCTTCAAGGTAGTTCGAGTG
AGGGTACTGCCTCTACAGTATCTCTGATTGACGCGCGCTCCTCTTTTCCC
ATACACATGTGCGATTCTGACACTATCGGAGGATGTGACCTATGTCAATC
TGATGTGTCTATCTCACGGATCTTTTCAGTACTCGCTTTCTGAGGTTAGG
CAATGATTTTTCGATAGTAACTACTGCTGTAGAATGCTACAGACAGTAAT
CCTCCTGCAGGTTTAGAACTACTGCTGTACCTTCTCAGGCTGTCGGGCTC
TGACTTTTGTGTCCTTCCTCGTCAATCAATCTATACCTTGTTTGATGGCC
ACTAATATGTTATATAACATCAGAAGGTCTAGGTGCATTCAGATTTTTCT
TCAAAGTACAGTGTTGATCATATTTTTCTACGATCGACTCCCACTCACCA
ATACCGCCTCTGATACTTTCAGTATAACACATCATGCCCACTATAACTCT
ATACCAATATTAGTATAGTGGGCGTAGGAAAAGAGAGGCGCATATTAATT
GGTCATAGTCCATGGTGACACCTGAAAATGCAGCACCCGTTACTCAAACT
ACCTTCAGGACAACTGTCCTTGTGCCGGCGGACTCTTGGCAGTGTACACC
ATCGGTACGCGATTGCGTGACTCGATAAACTCGGCACTGACCCGATGTGG
TTGACGGTATGTATATAGTTAGTCTATGTGGACGCCGGGAGGAATCCCGT
GAGCAAGCTCCAGATTCAGTCTCAGAGTGGAGAATAGGCGGGCTGGCGCG
GGACGGGACTGCCGAACCTGTCTCGCGAGACAAATTCTCAAGCGCAAACA
GGGACAGGGAATCATTCATTTTCCCTGTTCAGCTGACTGACCACGATCAG
GATTGACAACCTCACCCGGTTGATTCGTACTCTACTGAAAGTGCTGACCA
TCCATATGTAATACTCTAATATAGCATACAGTGAGTGATTTTCAGGTTCA
TCGTGTTCTTTGGCCTCTGTTTTGGTGCGCACCTATATGGCGATTAATAT
ATTAAACTTAGTATACAGTATAATGGTGGGTCTTTCCCCGATATTGAAAT
GTTGGCCGTATGATACTATAAATTAATATCATTGGGGAACCCGCTAAATG
CCCCATGACGAGTTTTTACCCTTGCATCCTATTAAGTTCCCACCTAAACA
TTTTGACAGTTTCCCCCCCTGGCTGGGTGGATTCTCATACCATATCATAT
CATACCATATCATACCATATCATCTCGTATCATATAATGATGATGAAGGT
TTCGATGTAATCAGATTTTTCTGCAAACGAGAATAAGTACGGCAGTATCT
CATCATACCATATCATATATATTTCTGCAAACGAGAATAAGTACTGCTGT
AGACTATAATACCTGCTTTGTTTAAAGAAAAATCAGTTACAAGACGATTG
AGTGGACCGACGGGGATTTTGGAAGGTAGGTCGGAAGGCGTTGGAAGTGT
TGAGAGTTTTGAAGTTAGCCAAGGGAGTAGATAGTAGATGGTCTCGTACT
GTAGTATCTATATGTATGGTCATAGTCCTCATACATATAGCGAGGGTATG
GATCAACCTAGTATGGCTGCCAATCCTGCTCGTGGTCAGCTGAACAGGGA
AAATGAATGTTTCCCTGTCCGCGTTCGTGCCTGAGGATTTGGTCTCGCGA
GACGGGTTCGACAGTCCCGTCCCGCGTTAGCCTGCTCGTCTCCATACTCA
GACTGAATCTAGTGCTTACTTATGGGGTTCCTCCCGAGTTCCGCGGCGGC
GTCCACATACATTTATTTAAAACCTCCATACGCCATCGGGTCAGTCCCGA
GTTTATCGGGTGACGTGTGTACAGATGGCGTTCACTGCCGAGAGTCCACC
AGCACAGGGCCCGTAAACCTCAAGGTAGTTCCGAACGAGTGCTGCCTTGG
CAGGTCACCATGGACCAATCAATATGCGCCTCTCTTTCCCACACCCACTG
TTGGTATGAAGTGGGTATGTTGGATAAGTAACCTCGACCAGTCTAAACTT
TTATTTAATTTCATTGAGTACAGTTTTTTTTAATTAAGGCTTTTCATTTT
GCGTTTTTAGATTTTGTTTTCTAGGTATAAATGTTGCGGCTTAATATTAT
TTGCATTTTTTTGTTGTAATTTTTTTACACCAACTTTGATTTAATTTACT
TTTTATAAATTTCGTTTCCCATCAAGATTCTCTTGAGTTTTGCTTGATCA
TAACGCAATTTCAATATATTTAGGTCTGAACATAAATTCATTATTCACTT
TTGATTTTATTTTGTTTGAATCAATTTCTTGTCGCCATTCTATTTTTTTA
TTGGTCTTGGTATTGATATTTATTAAAAAAAAAAATCTGAACGCACATCT
AGACCTTCTGAGCATCCCGCAGTCAGGGGGGGGAAATGTCAAAGCGTTTA
GGTAGGATCATAGGCTGCAAAGACATTGTTTGGTTTACGTTATTAAAATC
AAAAACACTTTTTAGTCTGACTCGACGTGATATTATAATGAATTCCCATG
TCCTTTTTTTTCTTTCTTTTTTCTTTCATTTCACTTACTAATAGTATAGC
CGATGGGCCTCATTCCATCCTGCCTGTGGCCACAAAGGATCTTCCCATCT
CTCCCCGGTTCACGCCTTACGAATTTTTATCGCGATGCAAGTTCAGCACT
CTTACAAGTCGTCAACCAATGGTTGAATTTTACCTACCCACGTTTCCACG
CTTTCTGCTACGGAAGCAAGAATTAAAATCCTGATTTAGACAAGAATCGA
ACTCACGACCTCCGCACTAGCAGGTGTGCAGGTTACCTACTAGACCACTT
GGGCGACGAGATGATAACGCCTGTACCATAGTTTAAAGGGTATGGCTATT
TACCCCACCGATGGGCTATTCTCTTGTTTACCCCCTCCACTTGGATCTCG
TGTCAGAAGACTCGGTTGGTCACAGTACATGCATAAGTGTGTTAGAGTTG
GGGTCAGCTATCATGGGGTCTATCGTGCAGCCCGAACGGTCCTGTCTACG
TGCTACCACGGCCGGTGGGGTAGTTGGTGTTTTCTGGTATGTATGGTTGT
TTGCCCTTACATACCAGAAAACACCAACCCCCCCACCAACCGCAACAGCA
CGTAGCCAAGACCGTTTGGGCTGACGATAGACCCGATGATAGCCCTGTGA
CGCGCCAACACACTCATGCATGTACTGTGACCAACCGTGTCTTCTGACGC
GAGATCCAGGTGGTGGGGTAAATTTGGGAATGGCCCATCGGTGGGGCAAA
TAGTCATTTCCTAGTTTAAACTCTTCACTTTTTTATCGCGCGACGAAAGT
CTGAAACTCCTCTACCTCTCCTTGTTTACTCATGTTCTCAGGCTCGCGCG
TTCCAATGGGCGAGTAGAGCCTATACCTCCAGAGCCAAAGTGGTACCTGG
TATATAAATACTAGCCCGCGTAGCTCAAGCCCAGTAGCAGCCTTTCTGTA
GATGAACTCGCGACCACTGCACGACGGACTTGTTCTTCCACGTTGTTCAC
ATTTAAGCCGGGCGCAGCGGTTAATAATCATGACATCGACAAGGGCACAG
GGTCGTAGCGAGCGCATGTGGACGGGTAGATCTCGCTTCCCATGTCCACC
GGGTTTTATCGTCCTACCTCTCTCGATGTCGTCTCCGGCAATATATACCT
CAGTTCTATGATGTACAGGTGTATATATATCCTCGTGGTTTGCTTTTTAC
ACTTTTTTTTTTTTTAAAAAAAAAAAAAAAAAATCTCACTTATAGTCGAT
GGACCTCATCATTACCATCCTGCCTGTGGTCACTAAGGATCTTTCCTTCT
CTCCCTGGTTCACGCCTTACATTTTTTTTTTATCGCGATGCAAGTTCAGC
AATCTTACAACTCGTTAACCGATGGTTTAAATTTTACTTACTCACGTTCC
CACGCTTTCTGTTACGGAAGAAAGAACACAAATTCTGCTTAAGCTAAGAA
TCGAACTCGCGACTTCCGCACTAGCAGGTGTGCAGGTTACCTACTAGACC
ACTCGGGCGACTATCGTATAATATTCCTGATTTGAGATTTTAGCAGCTGC
CCAAGGGTCATAGCTGGACATGTAGCTCCAGCTTTCAAGGCGATTGTCTG
TATTGTATTGTATTAAAACATTGTATTAAAAAATGCCCCTCCTTCCCTCC
TTACTCGACTATCGTACCCTGCCTCCCTTGGTAGCGAACGGTGGATCGGT
TGTACGTGGACCGCACGTTCGGAGGTCAAGACTGGTTTAGCGTGCGGCAG
AAGGCGCTGAAGGTTGGGAAGAAACATGACCCGTGATTCGTGGTTACCCA
TCATCTGTCTTCTTCCAATGTTGACATCAGTTACAAGATGGTTGATGAGG
AATAATATTTGGCCGTGGTTCCGTTCACTCTACTTCGATAAGGTTCAATC
TGTCGCCAGTACATGATGTCTTCTATACGTAGACAGGGTGAAGTCTGCCT
CTGTCTAACGATTCCCACGGTACACAGCATGGTGAAAAGACACACACAAG
GCGCTGCACGCTGTTTCTCGGGTTGCTGTTGCGCCCGCTTTACTCGTTCT
ATAGCTTGACATCGAAGCTCTGAAGGTTTTCCCTAGCCCCCTATCCTATT
TCACCGTATGGACTTGGCGTCCATCGCCACAGGAAGCTAAGAAGGGTCTG
ACAGAAGCGGAGCTAAACGCGGCCCTCTCGAACATGCTTGCTCCTTTAGG
CGATCGTTACACGCGATATCTCCCCCCTGCCAAGTACGACACCATCGTTC
AGGTACACGAGACTTGTCTATGTTCCCCGTATGGTTCGGTGTTTTGCGCC
CTCGAGCGCGAACGGCGGTTGAGTAAGACTAGTGCACCTTGGCGCTGACC
GCAAAACAGTTTCGACGTCTCCATTGCAAGGCTCTCTTGTCTTGGAGCTC
GTTGACCGTCCATGCTCATGAAGTACGCGCGAGCGAGCAGCTTTAAACTC
CTCGTCCCAACGGCGAGTAACACGTTACACTGACCTGATTGGACCCTCGC
GGCGTCACCAATCTTGTGTCAAGGAGAGAGAAAAGTCCGTTCGAACTGCT
GTTGCGGCGGCTCATACACATCTGAAACTGACGCGCGCGTTGTCTTGCCG
CGCAGGCGAACGCTGATGCACATCTTCCAAAGTGTTTTTACCCACCCTAA
CGCAAAATTTCGTCGCAGTCATCCTCCGGCGACGTGGCTGGAGTTGGGGT
GTCATTGTCCACGGACATCGGGCGAGATTTACCCCTCATCGTGGGGGTTG
AAAGCGGAACACCAGCTGCCGAAGCCGGGCTCAAGGTGAATACCCTTGCG
GGCCTAAATACATACAGATAAGCCCCCGCGCATGCTACCCAAGGTGTTTA
CTCGAGGGATCTCGTTGGACGAATGGCATTGCTGGTATCTTCGCCGAGAT
CGAGTGAACAGCTATAATCGGTTCAGCTGATGGCGTTGCCTATGGGGGTG
ATGCGACTGATCGCTGTCAGTTGTGCGTGTGCCGCGGGTCGATCAGGTGA
ATTTTTATCCTAAAGTGGGGACAACTGGGGATGCTTTCGCTGACTCCTAG
AAGTTCTTATCTTGGAGTAGAAGTTGTTGTCTCGCAGGTCCTCTCGCTCC
TATGTTCCACGCCACCTAACGGTGCCCTCTAAACTCGTTAGAATCATTGA
ACCGCTGTGGCCTATTATCACTGCGCGACCTGCTCACAATCTCATGGCAC
GAACGTGGTACACGCGCATTCGAAAGCTGCCTGCCTTGTAGATAATTATA
TAGTTGTATGTATGCACATGGTAAGATTTCACGACACATCATCACTCGCA
ATCGCGGTCGATGTTGAACCTCAGGCGGGTGACTTGTTAGTTCAGATCAG
CGGAGAAGACTGCCGGGGTCTTGCGCCGGATGATGCGGCGGCTTTGCTGA
GGGGCACCGAGAACACCAGGGTGGGCCTTGTTGCGGAGCGACCAGCCCGG
GCAGCCGTCGGCAACGATGGCGTTGGTCCGACGGGAGGGGAAAAGCTGGA
CTTGATCGTTACTCGACGAAAGTTCAAGGTGGAGGGAGTGATTCCCAAGG
AAGTAAACATCAACGGACAAAGCATAGGGGTGAGTTTTTTTAACAGACTC
ACTATTAAAAAAAAGCTGTAGAGCTTGTGGTGTGTCGACATTGAGTTAAT
TGTAACCCACGCTGTGATATATTCGCTTGTTCGTGTTTTTTTACCACGCC
GAAAGGATCTTGAATAATGTTGGCTTACGCACATGGCTTTTAAAATCTTT
TTCGGGGATCGCCGAGGCGGAACTTCTCGTTTGGGTCAGAAATTGCCCGG
CAACCATTAGGAGCTCATTACCAATGCCTCGGCTTCTGGACAAACGTAAT
TATCCGTAACGGTCTCTCTTGTACGTGCATTAAGAACAGTGCTAATTGAA
AAATATTGCACTGCAGGCAACACATTACACTTCCCCCCCTTCGATAGTGT
ACCTATGGATCGCAAACCCCTGCTTTTCTCTTTTCACCGAGCTTTCTTCA
CGAACGCGGATAACCCTTAGACTGCCTAGTCACGTGACTGGTACCTAGGC
GGCTCCCTTGACAAACGGTGGTCGAGGTTGGATTTGAACTCACGCCTTCA
TCTGTTTTCGAGGCGATAACCCCTGGGCTATCTAGTCACGTGACCAGGTG
CCCCAGGGGTTATCGACTTGAAACAGGTGTTTTTTTGTGAGCTCAAACGA
GTCCGGCCACGATACAATCTCCGGAGCACTTCCCTAGCCACGGACTGGCT
CGTATCGTGTATTCCGAACCATTGTCGATAGGTCGAGTTACGTTTAGTAG
TGCATCCCTGATCCGTAGGTAGCAAGCACTCCGGCGGGAAGATGATGTGG
GTCTAGTATACGTTTGAGGGTGGGAGTTGATATGAAAAGACGCTTGGTGT
TCTGACCTCGTTAAGAACATGAAAGTTGGGTTGCTCTTCGATCGCCAACG
AATGAGAAAATTCCTCCGCACTGCTTCGGCACAGATTGTACGGATCAAGT
CTTTCAGCTCCAACACGGCGCAAGACGTCCGAAACGCCGTTGAGCGTTTC
AAGTCCAAGGGTGTGGATAGGATCGTTGTCGATCTCAGGGGCAATGTCGG
CGGGTTACTGCCGGGTGGTATAGATACTGCTGGATTGTTCCTGGACTCCG
GGAAGGTATTTGTATAGCTCTAAAGGTTGAATATTAGCCGTAAGGATTAA
AGTTAGCCAAAGTTAACTAATGTTAACACTATAGCTCTAGTACTCCCAGC
CTTTTCTAGCTTAGAGCTAGGCACTGTAAGGCAAGGTGCTATTTCAGACA
TTTTCATTTTCTTGGCTCAAGCAAAGGTCGTCCATCGTTGAGAAGCCGCC
CAACTTTTCGAAAGCTACGAGCATTTTAGCTCCGGAACCGTTTTCTCCCT
GGGAAAACCGAGCCGGACTTGATAAGTGCGTCCACGCCTCGAACTACAGT
GTAGCTGTTTGGTGACCCCTGCTGCTGCAGGACGTGGTCTTCATCATCCG
GAAAAACGGTTCAGTGGAAGCCCGGAGTACGTTGGCAAAGGGGCCGAACG
CGCAGGGGCCTCCCCTCGCGATATTGGTGGATAAGGGCACTGCGTCGGCG
GCTGAGGTATTCGCCGCAGCTGTAAGGTGCGCTTTTTTTCTTTTTCTTTT
TTAATAAATATAAATATAAATATATTTTGTACAAGTAGGTAGTATAGTGG
CGCGCAATCTACCCTAACTCGAGGCTGATATTTGCTTCAGAAGTATTTTG
CCTGAAAGGAACCAGTGAAGCTTGGAGGTAGTCCCAAAACATCCGGCGCC
CCGGATGCTTTGCGTTCAGATCATGGGTTCAGTCAGCGACGAACAGATCA
ATAGTTCGTGCGTCGTGAGGAGGGGAACTATTTTGTCTGTAAAGTATTTT
GAGAAAACTGCGTTCCGTTGATATGCGGGAAATTTTCTAAGGTTGGTGCA
TGGTACGGCCATATCGATGTCAATGCTCCCATAACGCTGTCTTCTATTTT
CCTGTCTCCTCTGCCTTGAGCACTACGGTAAAACGCCCTCTCGGCTTCCA
CCAGAGAAAATGATCGCGCAACGTTGGTGGGAGAGCGCACCTTCGGCAAG
GGCGTCATCCAGACAGTGGAGCCTCTGAACAGCGGGGGGGGTGTTGCGGT
GACCGTGGCAAGGCGAGCTACCTTTGCGCGCGATTGAAAAAAGAGTTGTC
TGTAGCCAAGATTTAGAACCGGCGCTAATGATGATGGCCGGGCACGGTGG
TGCAGTAGTTGAATGACTCACCGTTTGCTCCCACACATCGGAACGATCAA
GCGCGGAGCATATAATCGATCGATCGAGAGCATTTGCTGCGTGCTCGATC
TTTCATCTCCTTGATCAATCTCGACCATCAACCTATCGTTCGTTTTGTGT
AAGAGGCTTTCCGAAACCCAAACCTATCTGATGAAGAATCGACACCGCTG
TCTTCCTTTCCACCGTTGGGACTGCTACCGGTGTCTGCATTGCTCTGGGT
GTCTGGTAACCAGGTACGAGACCCCGTTGCACCATGATATCAACAAGGTC
GGAATACCGGTGGACAGAACGATCGATTGTCCCGCGGATCGGGATTCGGC
GGAGTGCGACATTTAGACGGGCGCGGCAGAATCGACACGGTAGTTTGAGC
TCTAATGGTTATCCTCGACCAAACCCAAGGAATATCGATCACAGGTACAG
GAGGAGCTTTTATTCGGCGCGGGCATGGTAACCTCGGCGGTTGCTGGTTA
GAGAATCTAATGCAGACCTGCGTTCGGTGGAACGTCTGTGCGCCGTGTCG
CTTCCAAATGGAGCTATATAGCGTTGTGTATGAGCTTTGTACTGCAGGGC
CCTTTTTGCCCCCTGCTTGGTGAACCTGTAATAGACCAGCAGCTCTAGCC
GTCGCCACCTGGGTTTAAAAGTTGATTTGGAGAGAAAGTGGTATTTTGTA
GAAAATTCAGCTATAGCTCTTAGCTTAGAAACAGCTTTAGAATATTAATC
GTAGCACTTCACAACTGATACATTGCGCAGAGAGAACTGTTGACCACTAG
TGGAAGATGTCC
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig815:39339..49800+

>mRNA_F-serratus_M_contig815.19564.1 ID=mRNA_F-serratus_M_contig815.19564.1|Name=mRNA_F-serratus_M_contig815.19564.1|organism=Fucus serratus male|type=CDS|length=3084bp|location=Sequence derived from alignment at F-serratus_M_contig815:39339..49800+ (Fucus serratus male)
ATGAGTTCAACGCGTCTTGGTCGCGCGCTTTTTGCGTTCTTGCTCCGCGA
AGGTCTCGTTCAATCCTTTGTACCATGTATAATCCCATCTGCGCGTTTGC
ATCCGTGGCTTCCATCGCCGACGAAGCTTCGATCCGTTGCTCCCGTGGAG
CTATCCCGGTCTCCACGCACACACCAGATCATGCGCGCCGCATCTCAGTC
ACCACTAGAAGAAGAAAAAGAAGAAATCAACAAGCCCCTCCCCTGGCGTT
CACAGAGGGTCATGATTTCGACGCTGCTGACTACTGTTGTGCTGCTGACT
GGCATCGTGCCAAGTTATGAGTTGGAGAACCGACAAACGTCATTGGATCA
ACCGTCAACCTCGCGAGCTGTTCCCAGCTGGGGACTGCGCACTGCTGGTG
CAGCGACTTTCAATGACGCCCAGAGGGCCATCGCCGAGACGTGGATGAGT
TCAACGCGTCTTGGTCGCGCGCTTTTTGCGTTCTTGCTCCGCGAAGGTCT
CGTTCAATCCTTTGTACCATGTATAATCCCATCTGCGCGTTTGCATCCGT
GGCTTCCATCGCCGACGAAGCTTCGATCCGTTGCTCCCGTGGAGCTATCC
CGGTCTCCACGCACACACCAGATCATGCGCGCCGCATCTCAGTCACCACT
AGAAGAAGAAAAAGAAGAAATCAACAAGCCCCTCCCCTGGCGTTCACAGA
GGGTCATGATTTCGACGCTGCTGACTACTGTTGTGCTGCTGACTGGCATC
GTGCCAAGTTATGAGTTGGAGAACCGACAAACGTCATTGGATCAACCGTC
AACCTCGCGAGCTGTTCCCAGCTGGGGACTGCGCACTGCTGGTGCAGCGA
CTTTCAATGACGCCCAGAGGGCCATCGCCGAGACGTGGCGAACGGTGGAT
CGGTTGTACGTGGACCGCACGTTCGGAGGTCAAGACTGGTTTAGCGTGCG
GCAGAAGGCGCTGAAGCGAACGGTGGATCGGTTGTACGTGGACCGCACGT
TCGGAGGTCAAGACTGGTTTAGCGTGCGGCAGAAGGCGCTGAAGGAAGCT
AAGAAGGGTCTGACAGAAGCGGAGCTAAACGCGGCCCTCTCGAACATGCT
TGCTCCTTTAGGCGATCGTTACACGCGATATCTCCCCCCTGCCAAGTACG
ACACCATCGTTCAGGAAGCTAAGAAGGGTCTGACAGAAGCGGAGCTAAAC
GCGGCCCTCTCGAACATGCTTGCTCCTTTAGGCGATCGTTACACGCGATA
TCTCCCCCCTGCCAAGTACGACACCATCGTTCAGTCATCCTCCGGCGACG
TGGCTGGAGTTGGGGTGTCATTGTCCACGGACATCGGGCGAGATTTACCC
CTCATCGTGGGGGTTGAAAGCGGAACACCAGCTGCCGAAGCCGGGCTCAA
GTCATCCTCCGGCGACGTGGCTGGAGTTGGGGTGTCATTGTCCACGGACA
TCGGGCGAGATTTACCCCTCATCGTGGGGGTTGAAAGCGGAACACCAGCT
GCCGAAGCCGGGCTCAAGGCGGGTGACTTGTTAGTTCAGATCAGCGGAGA
AGACTGCCGGGGTCTTGCGCCGGATGATGCGGCGGCTTTGCTGAGGGGCA
CCGAGAACACCAGGGTGGGCCTTGTTGCGGAGCGACCAGCCCGGGCAGCC
GTCGGCAACGATGGCGTTGGTCCGACGGGAGGGGAAAAGCTGGACTTGAT
CGTTACTCGACGAAAGTTCAAGGTGGAGGGAGTGATTCCCAAGGAAGTAA
ACATCAACGGACAAAGCATAGGGGCGGGTGACTTGTTAGTTCAGATCAGC
GGAGAAGACTGCCGGGGTCTTGCGCCGGATGATGCGGCGGCTTTGCTGAG
GGGCACCGAGAACACCAGGGTGGGCCTTGTTGCGGAGCGACCAGCCCGGG
CAGCCGTCGGCAACGATGGCGTTGGTCCGACGGGAGGGGAAAAGCTGGAC
TTGATCGTTACTCGACGAAAGTTCAAGGTGGAGGGAGTGATTCCCAAGGA
AGTAAACATCAACGGACAAAGCATAGGGATTGTACGGATCAAGTCTTTCA
GCTCCAACACGGCGCAAGACGTCCGAAACGCCGTTGAGCGTTTCAAGTCC
AAGGGTGTGGATAGGATCGTTGTCGATCTCAGGGGCAATGTCGGCGGGTT
ACTGCCGGGTGGTATAGATACTGCTGGATTGTTCCTGGACTCCGGGAAGA
TTGTACGGATCAAGTCTTTCAGCTCCAACACGGCGCAAGACGTCCGAAAC
GCCGTTGAGCGTTTCAAGTCCAAGGGTGTGGATAGGATCGTTGTCGATCT
CAGGGGCAATGTCGGCGGGTTACTGCCGGGTGGTATAGATACTGCTGGAT
TGTTCCTGGACTCCGGGAAGGACGTGGTCTTCATCATCCGGAAAAACGGT
TCAGTGGAAGCCCGGAGTACGTTGGCAAAGGGGCCGAACGCGCAGGGGCC
TCCCCTCGCGATATTGGTGGATAAGGGCACTGCGTCGGCGGCTGAGGTAT
TCGCCGCAGCTGTAAGGACGTGGTCTTCATCATCCGGAAAAACGGTTCAG
TGGAAGCCCGGAGTACGTTGGCAAAGGGGCCGAACGCGCAGGGGCCTCCC
CTCGCGATATTGGTGGATAAGGGCACTGCGTCGGCGGCTGAGGTATTCGC
CGCAGCTGTAAGAGAAAATGATCGCGCAACGTTGGTGGGAGAGCGCACCT
TCGGCAAGGGCGTCATCCAGACAGTGGAGCCTCTGAACAGCGGGGGGGGT
GTTGCGGTGACCGTGGCAAGAGAAAATGATCGCGCAACGTTGGTGGGAGA
GCGCACCTTCGGCAAGGGCGTCATCCAGACAGTGGAGCCTCTGAACAGCG
GGGGGGGTGTTGCGGTGACCGTGGCAAGGTACGAGACCCCGTTGCACCAT
GATATCAACAAGGTCGGAATACCGGTGGACAGAACGATCGATTGTCCCGC
GGATCGGGATTCGGCGGAGTGCGACATTTAGGTACGAGACCCCGTTGCAC
CATGATATCAACAAGGTCGGAATACCGGTGGACAGAACGATCGATTGTCC
CGCGGATCGGGATTCGGCGGAGTGCGACATTTAG
back to top