mRNA_F-serratus_M_contig815.19563.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig815.19563.1 vs. uniprot
Match: D7FKS8_ECTSI (Telomerase reverse transcriptase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKS8_ECTSI) HSP 1 Score: 157 bits (398), Expect = 5.430e-43 Identity = 124/329 (37.69%), Postives = 150/329 (45.59%), Query Frame = 1
Query: 1 MIEEHVTNAVVEVPAAGGPGRGAFYRQAVGIPQGSVLSVLLCN-FFFGHIEEKLLGKILAAPTPPLPVS-----------------KARSSVAAGKNGYSRRFARSSGNHPPGSRRHDP-------------------------------------CPFLCPAGNADDDA-------GTDDGSGARRRLGKAPRCELPAE----NSFDKANGGHCCHPTRGEQHVSTDTLRGGQSRREREGSRCAERSIVNGLRRGPGIEERGSCPTPQTRPFPDPEGDCTLLRQVDDFLL-----VTTSKAKAEAFVRVMHDHVRTSEWGFGVHEGKV 774
M+E+H+ N VV VPAAGG G+GA+++QAVGIPQGSVLS LLCN FFFGHIE++LLG +L P P + RS G +G A SS P G +R P C L A D D G +G G G E P + N+ ++ GH + G H GG E+ G AER EE G PFPDPEGDCTLLRQVDDFLL ++TSKAKAE+FVRVMHD V+T +WGF VH+ KV
Sbjct: 1 MVEDHIKNNVVRVPAAGGSGKGAYFQQAVGIPQGSVLSGLLCNYFFFGHIEKRLLGDVLDGGVPERPHRPPGGGGARGLSARAVGLERRSDGIGGGSGSQGAGATSSFAPPAGGKRGRPGERXXXXXXXXXXXXXXXXXXXXXGERPPKFARISPACSRLGDAAAPDSDRASRGGVLGVPNGRGGGGSDGNRGPHETPQQQSCRNTANQNGRGHGSYGPVGGPHRGERCRLGGNGDDEQRGRGPAER------------EESGG-----ESPFPDPEGDCTLLRQVDDFLLESDDGISTSKAKAESFVRVMHDEVKTGDWGFSVHQAKV 312
BLAST of mRNA_F-serratus_M_contig815.19563.1 vs. uniprot
Match: A0A6H5K5W1_9PHAE (Telomerase reverse transcriptase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5W1_9PHAE) HSP 1 Score: 162 bits (410), Expect = 3.640e-42 Identity = 124/318 (38.99%), Postives = 153/318 (48.11%), Query Frame = 1
Query: 1 MIEEHVTNAVVEVPAAGGPGRGAFYRQAVGIPQGSVLSVLLCNFFFGHIEEKLLGKILAAPTPPLP------------------VSKARSSVAAGKNGYSRRFARSSGNHPPGSRRHDP---------CPFLCPAGNADDDAGTDDGSGARR-----RLGKAPRC--ELPAENSFDKANGGHCCHPTRGEQHVSTDTLRGG------QSRRE------------------REGSRCAERSIVNGLRRG--PGIEERGSCPTPQTRPFPDPEGDCTLLRQVDDFLLVTTSKAKAEAFVRVMHDHVRTSEWGFGVHEGKV 774
M+E+H+ + VV VPAAGG G+GA+ +QAVGIPQGSVLS LLCN+FFGHIE++LLG +L P P + + AG G A S G P G +R P P R R+ + C + A +S + GG PT G +D RG QSRR R G RC V+ +RG P EE G + RPFPDPEGDCTLLRQVDDFLL++TSKAKAE+FVRVMHD V+T +WGF VH+ K
Sbjct: 78 MVEDHIKHNVVRVPAAGGSGKGAYLQQAVGIPQGSVLSGLLCNYFFGHIEKRLLGDVLDGGVPERPHLPPGGGGARGLSSRAVGLESRSDGIGAGSGGQDEGAASSFGP-PTGGKRARPGERERXXXXXPVTXXXXXXXXXXXXXXXXXGERPPKFARISPSCSCLSDAAAPDSDRASRGGVLGVPT-GRDGGGSDGNRGPHETPQQQSRRNTANQNGRGHGSYGPVGGARGGERCRLGGDVDDGQRGRSPVEEESG-----EERPFPDPEGDCTLLRQVDDFLLISTSKAKAESFVRVMHDEVKTGDWGFSVHQAKT 388
BLAST of mRNA_F-serratus_M_contig815.19563.1 vs. uniprot
Match: D7G4G6_ECTSI (Telomerase reverse transcriptase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4G6_ECTSI) HSP 1 Score: 163 bits (413), Expect = 3.840e-42 Identity = 123/322 (38.20%), Postives = 149/322 (46.27%), Query Frame = 1
Query: 1 MIEEHVTNAVVEVPAAGGPGRGAFYRQAVGIPQGSVLSVLLCN-FFFGHIEEKLLGKILAAPTPPLPVS-----------------KARSSVAAGKNGYSRRFARSSGNHPPGSRRHDP-----------------------------------CPFLCPAGNADDDA-------GTDDGSGARRRLGKAPRCELPAE----NSFDKANGGHCCHPTRGEQHVSTDTLRGGQSRREREGSRCAERSIVNGLRRGPGIEERGSCPTPQTRPFPDPEGDCTLLRQVDDFLLVTTSKAKAEAFVRVMHDHVRTSEWGFGVHEGKV 774
M+E+H+ N VV VPAAGG G+GA+++QAVGIPQGSVLS LLCN FFFGHIE++LLG +L P P + RS G +G A SS P G +R P C L A D D G +G G G E P + N+ ++ GH + G H GG E+ G AER EE G PFPDPEGDCTLLRQVDDFLL++TSKAKAE+FVRVMHD V+T +WGF VH+ K
Sbjct: 1 MVEDHIKNNVVRVPAAGGSGKGAYFQQAVGIPQGSVLSGLLCNYFFFGHIEKRLLGDVLDGGVPERPHRPPGGGGARGLSARAVGLERRSDGIGGGSGSQGEGATSSFAPPAGGKRGRPGERXXXXXXXXXXXXXXXXXXXGERPPKFARISPACSRLGDAAAPDSDRASRGGVLGVPNGRGGGGSDGNRGPHETPQQQSCRNTANQNGRGHGSYGPVGGPHRGERCRLGGNGDDEQRGRGPAER------------EESGG-----ESPFPDPEGDCTLLRQVDDFLLISTSKAKAESFVRVMHDEVKTGDWGFSVHQAKT 305
BLAST of mRNA_F-serratus_M_contig815.19563.1 vs. uniprot
Match: G4TNH4_SERID (Telomerase reverse transcriptase n=1 Tax=Serendipita indica (strain DSM 11827) TaxID=1109443 RepID=G4TNH4_SERID) HSP 1 Score: 62.8 bits (151), Expect = 1.700e-7 Identity = 27/50 (54.00%), Postives = 38/50 (76.00%), Query Frame = 1
Query: 1 MIEEHVTNAVVEVPAAGGPGRGAFYRQAVGIPQGSVLSVLLCNFFFGHIE 150
++EEH+T+ +V++ RG FY+Q VGIPQGSVLS +LCNFF+G +E
Sbjct: 537 LLEEHITSNIVKI-------RGEFYKQQVGIPQGSVLSTILCNFFYGDLE 579
BLAST of mRNA_F-serratus_M_contig815.19563.1 vs. uniprot
Match: A0A0E9NB64_SAICN (Telomerase reverse transcriptase n=1 Tax=Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804) TaxID=698492 RepID=A0A0E9NB64_SAICN) HSP 1 Score: 62.8 bits (151), Expect = 1.800e-7 Identity = 31/57 (54.39%), Postives = 41/57 (71.93%), Query Frame = 1
Query: 1 MIEEHVTNAVVEVPAAGGPGRGAFYRQAVGIPQGSVLSVLLCNFFFGHIEEKLLGKI 171
M+EEH+ N +V++ GR +YRQ GIPQGSVLS +LCNFF+G +E+K LG I
Sbjct: 795 MVEEHIQNNLVKI------GR-KYYRQRTGIPQGSVLSTILCNFFYGDLEKKHLGFI 844
BLAST of mRNA_F-serratus_M_contig815.19563.1 vs. uniprot
Match: A0A8H6ZD88_9AGAR (Telomerase reverse transcriptase n=1 Tax=Mycena sanguinolenta TaxID=230812 RepID=A0A8H6ZD88_9AGAR) HSP 1 Score: 59.7 bits (143), Expect = 1.880e-6 Identity = 28/65 (43.08%), Postives = 44/65 (67.69%), Query Frame = 1
Query: 1 MIEEHVTNAVVEVPAAGGPGRGAFYRQAVGIPQGSVLSVLLCNFFFGHIEEKLLGKILAAPTPPL 195
++EEH+T+ +V++ A +YRQ +GIPQGSVLS +LC+FF+G +E++ GK + P L
Sbjct: 738 LLEEHITDNIVKIGAD-------YYRQTIGIPQGSVLSSILCSFFYGDLEKRF-GKFMDDPNSVL 794
BLAST of mRNA_F-serratus_M_contig815.19563.1 vs. uniprot
Match: A0A286U9I3_9AGAM (Telomerase reverse transcriptase n=1 Tax=Pyrrhoderma noxium TaxID=2282107 RepID=A0A286U9I3_9AGAM) HSP 1 Score: 59.7 bits (143), Expect = 1.910e-6 Identity = 28/54 (51.85%), Postives = 39/54 (72.22%), Query Frame = 1
Query: 1 MIEEHVTNAVVEVPAAGGPGRGAFYRQAVGIPQGSVLSVLLCNFFFGHIEEKLL 162
++EEH++ VV++ +YRQ VGIPQGSVLS LLC+FF+GH+EE+ L
Sbjct: 572 LLEEHISCNVVKIGQD-------YYRQRVGIPQGSVLSTLLCSFFYGHLEEEEL 618
BLAST of mRNA_F-serratus_M_contig815.19563.1 vs. uniprot
Match: A0A1Y2IZN7_PYCCO (Telomerase reverse transcriptase n=1 Tax=Trametes coccinea BRFM310 TaxID=1353009 RepID=A0A1Y2IZN7_PYCCO) HSP 1 Score: 59.3 bits (142), Expect = 2.560e-6 Identity = 25/52 (48.08%), Postives = 37/52 (71.15%), Query Frame = 1
Query: 1 MIEEHVTNAVVEVPAAGGPGRGAFYRQAVGIPQGSVLSVLLCNFFFGHIEEK 156
++EEH+T +V++ + +YRQ VGIPQGSVLS LLC+FF+G +E +
Sbjct: 830 LLEEHITENIVKI-------KNEYYRQVVGIPQGSVLSALLCSFFYGDLERR 874
BLAST of mRNA_F-serratus_M_contig815.19563.1 vs. uniprot
Match: A0A0F4Z1F5_TALEM (Telomerase reverse transcriptase n=1 Tax=Rasamsonia emersonii CBS 393.64 TaxID=1408163 RepID=A0A0F4Z1F5_TALEM) HSP 1 Score: 58.5 bits (140), Expect = 4.740e-6 Identity = 27/55 (49.09%), Postives = 38/55 (69.09%), Query Frame = 1
Query: 1 MIEEHVTNAVVEVPAAGGPGRGAFYRQAVGIPQGSVLSVLLCNFFFGHIEEKLLG 165
++EEHV N +V++ ++RQ GIPQGSVLS LLCNFF+G +E ++LG
Sbjct: 871 LLEEHVRNNLVKIGKK-------YFRQRNGIPQGSVLSALLCNFFYGELEREVLG 918
BLAST of mRNA_F-serratus_M_contig815.19563.1 vs. uniprot
Match: A0A1M2VIG7_TRAPU (Telomerase reverse transcriptase n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VIG7_TRAPU) HSP 1 Score: 58.2 bits (139), Expect = 5.520e-6 Identity = 25/52 (48.08%), Postives = 36/52 (69.23%), Query Frame = 1
Query: 1 MIEEHVTNAVVEVPAAGGPGRGAFYRQAVGIPQGSVLSVLLCNFFFGHIEEK 156
++EEH+T +V++ +YRQ VGIPQGSVLS +LC+FF+G +E K
Sbjct: 390 LLEEHITENIVKIG-------NEYYRQVVGIPQGSVLSAILCSFFYGDLERK 434 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig815.19563.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig815.19563.1 >prot_F-serratus_M_contig815.19563.1 ID=prot_F-serratus_M_contig815.19563.1|Name=mRNA_F-serratus_M_contig815.19563.1|organism=Fucus serratus male|type=polypeptide|length=266bp MIEEHVTNAVVEVPAAGGPGRGAFYRQAVGIPQGSVLSVLLCNFFFGHIEback to top mRNA from alignment at F-serratus_M_contig815:14747..15715+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig815.19563.1 ID=mRNA_F-serratus_M_contig815.19563.1|Name=mRNA_F-serratus_M_contig815.19563.1|organism=Fucus serratus male|type=mRNA|length=969bp|location=Sequence derived from alignment at F-serratus_M_contig815:14747..15715+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig815:14747..15715+ >mRNA_F-serratus_M_contig815.19563.1 ID=mRNA_F-serratus_M_contig815.19563.1|Name=mRNA_F-serratus_M_contig815.19563.1|organism=Fucus serratus male|type=CDS|length=1596bp|location=Sequence derived from alignment at F-serratus_M_contig815:14747..15715+ (Fucus serratus male)back to top |