mRNA_F-serratus_M_contig8148.19562.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig8148.19562.1
Unique NamemRNA_F-serratus_M_contig8148.19562.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig8148.19562.1 vs. uniprot
Match: D7FUV8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUV8_ECTSI)

HSP 1 Score: 170 bits (430), Expect = 1.230e-50
Identity = 91/133 (68.42%), Postives = 104/133 (78.20%), Query Frame = 1
Query:   19 LRPAETPKDLKKRVNALNKSLASVHDRLIQTEKQIFDLERSYLEETRLYGNVLQGWDAYLESKGKGKGEIATRSSYLGGKFGGRQASKMSELNA-----KRAKGVELQERLFSLGSVTSPAAKGIHKQEDKRR 402
            +RP+ETPKDLKKRV  L+KSL SVH+RL+QTEKQIFDLERSYLEETRLYGNVLQGWDAYL++KGKG  +     +  GG+ GG +    SE        KRAKGVEL+ERLFSLGSVTSPAAKG+ K ED RR
Sbjct:   16 VRPSETPKDLKKRVRGLDKSLTSVHERLVQTEKQIFDLERSYLEETRLYGNVLQGWDAYLDTKGKGVADGGKGEAAAGGRGGGNKREAASEGEEGEGANKRAKGVELEERLFSLGSVTSPAAKGLQKLEDARR 148          
BLAST of mRNA_F-serratus_M_contig8148.19562.1 vs. uniprot
Match: A0A6H5KBZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBZ7_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 5.830e-32
Identity = 60/76 (78.95%), Postives = 67/76 (88.16%), Query Frame = 1
Query:   19 LRPAETPKDLKKRVNALNKSLASVHDRLIQTEKQIFDLERSYLEETRLYGNVLQGWDAYLESKGKG-----KGEIA 231
            +RP+ETPKDLKKRV  L+KSL SVH+RL+QTEKQIFDLERSYLEETRLYGNVLQGWDAYL++KGKG     KGE A
Sbjct:   16 VRPSETPKDLKKRVRGLDKSLTSVHERLVQTEKQIFDLERSYLEETRLYGNVLQGWDAYLDTKGKGVAAGGKGEAA 91          
BLAST of mRNA_F-serratus_M_contig8148.19562.1 vs. uniprot
Match: A0A484KC30_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484KC30_9ASTE)

HSP 1 Score: 64.3 bits (155), Expect = 3.030e-10
Identity = 43/124 (34.68%), Postives = 66/124 (53.23%), Query Frame = 1
Query:   67 LNKSLASVHDRLIQTEKQIFDLERSYLEETRLYGNVLQGWDAYLESKGKGKGEIATRSSYLGGKFGGRQASKMSELNAKRAKGVELQERLFSLGSVTSPAAK--GIHKQEDKRRTSGRQGDAGG 432
            LNK    + + L + EKQ++DLE SYL+E+  +GN L+G++ +L S  K                           N KR++  +L++RLFSL SVTSPAA+  G+ +++ K   S  +  AGG
Sbjct:   19 LNKK-QKLQEELRKVEKQVYDLETSYLQESGTFGNALRGFEGFLSSSNKNS-------------------------NLKRSRKFQLEDRLFSLSSVTSPAAEELGLRREDGKLDHSQGRSKAGG 116          
BLAST of mRNA_F-serratus_M_contig8148.19562.1 vs. uniprot
Match: UPI001C277A45 (chromatin modification-related protein eaf6-like n=3 Tax=Salvia TaxID=21880 RepID=UPI001C277A45)

HSP 1 Score: 64.7 bits (156), Expect = 4.500e-10
Identity = 41/117 (35.04%), Postives = 61/117 (52.14%), Query Frame = 1
Query:   19 LRPAETPKDLKKRVNALNKSLASVHDRLIQTEKQIFDLERSYLEETRLYGNVLQGWDAYLESKGKGKGEIATRSSYLGGKFGGRQASKMSELNAKRAKGVELQERLFSLGSVTSPAA 369
            LR +  PK +   +++L      + D L   EKQ+++LE SYL+ET  +GNVL+G+D +L S                           S  N KR++  +L++R+FSL SVTSPAA
Sbjct:    6 LRGSNNPKAM---LSSLLNKREKLQDELRSVEKQVYELETSYLQETTTFGNVLKGFDGFLSSS-------------------------KSASNLKRSRKFQLEDRVFSLSSVTSPAA 94          
BLAST of mRNA_F-serratus_M_contig8148.19562.1 vs. uniprot
Match: A0A022PPS1_ERYGU (Uncharacterized protein n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022PPS1_ERYGU)

HSP 1 Score: 64.3 bits (155), Expect = 6.300e-10
Identity = 39/117 (33.33%), Postives = 62/117 (52.99%), Query Frame = 1
Query:   19 LRPAETPKDLKKRVNALNKSLASVHDRLIQTEKQIFDLERSYLEETRLYGNVLQGWDAYLESKGKGKGEIATRSSYLGGKFGGRQASKMSELNAKRAKGVELQERLFSLGSVTSPAA 369
            LR +  PK +   +++L K    +H+ L   E Q+++LE SYL+ET  +GNVL+G+D +L S                           +  N KR++  ++++R+FSL SVTSPAA
Sbjct:    6 LRSSNNPKLM---LSSLLKKREKLHNELRSVENQVYELETSYLQETNTFGNVLKGFDGFLSSS-------------------------KNTTNLKRSRKFQIEDRVFSLSSVTSPAA 94          
BLAST of mRNA_F-serratus_M_contig8148.19562.1 vs. uniprot
Match: A0A484KJQ9_9ASTE (Uncharacterized protein n=2 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484KJQ9_9ASTE)

HSP 1 Score: 61.6 bits (148), Expect = 7.500e-9
Identity = 36/105 (34.29%), Postives = 58/105 (55.24%), Query Frame = 1
Query:   88 VHDRLIQTEKQIFDLERSYLEETRLYGNVLQGWDAYLESKGKGKGEIATRSSYLGGKFGGRQASKMSELNAKRAKGVELQERLFSLGSVTSPAAK--GIHKQEDK 396
            + D L + EKQ+++LE SYL+E+  +GN L+G++ +L S  K                           N KR++  +L++RLFSL SVTSPAA+  G+ +++ K
Sbjct:   25 LQDELRKVEKQVYELETSYLQESGTFGNALRGFEGFLSSLNKNS-------------------------NLKRSRKFQLEDRLFSLSSVTSPAAEELGLRREDGK 104          
BLAST of mRNA_F-serratus_M_contig8148.19562.1 vs. uniprot
Match: E9GD93_DAPPU (Chromatin modification-related protein MEAF6 n=2 Tax=Daphnia TaxID=6668 RepID=E9GD93_DAPPU)

HSP 1 Score: 60.8 bits (146), Expect = 1.380e-8
Identity = 49/136 (36.03%), Postives = 69/136 (50.74%), Query Frame = 1
Query:   43 DLKKRVNALNKSLASVHDRLIQTEKQIFDLERSYLEETRLYGNVLQGWDAYLESKGKGKGEIATRSSYLGGKFGGRQASKMSELNA-KRAKGVELQERLFSLGSVTSPAA-KGIHKQEDKR--RTSGRQGDAGGSG 438
            DL+  ++ L K    V + L   E+QI+  E SYLE+T+LYGN+++GWD YL S                        SK+S  ++ KR +  +  ERLFS  S+TS AA  GI     +R  R+S  +  AG SG
Sbjct:    9 DLRSELSDLVKRRIEVAETLANLERQIYAFEGSYLEDTQLYGNIIRGWDRYLNS-----------------------TSKLSNPSSDKRNRKFKENERLFSKSSITSMAAVSGIIDLNSERAERSSETESQAGMSG 121          
BLAST of mRNA_F-serratus_M_contig8148.19562.1 vs. uniprot
Match: A0A7N0VKN8_KALFE (Uncharacterized protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0VKN8_KALFE)

HSP 1 Score: 59.3 bits (142), Expect = 4.700e-8
Identity = 35/105 (33.33%), Postives = 54/105 (51.43%), Query Frame = 1
Query:   88 VHDRLIQTEKQIFDLERSYLEETRLYGNVLQGWDAYLESKGKGKGEIATRSSYLGGKFGGRQASKMSELNAKRAKGVELQERLFSLGSVTSPAAKGIHKQEDKRR 402
            +H+ L   EKQ+++LE SYL+++   GNVL+G++ YL S                           +  N KR++  + ++RLFSL SVTSPAA+ +    D  R
Sbjct:   26 LHEELRSIEKQVYELETSYLQDSSHIGNVLKGYEGYLSSS-------------------------KNAPNMKRSRKFQTEDRLFSLSSVTSPAAEELRNGRDDGR 105          
BLAST of mRNA_F-serratus_M_contig8148.19562.1 vs. uniprot
Match: A0A830BBD4_9LAMI (Chromatin modification-related protein meaf6 n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830BBD4_9LAMI)

HSP 1 Score: 59.3 bits (142), Expect = 4.880e-8
Identity = 37/117 (31.62%), Postives = 59/117 (50.43%), Query Frame = 1
Query:   19 LRPAETPKDLKKRVNALNKSLASVHDRLIQTEKQIFDLERSYLEETRLYGNVLQGWDAYLESKGKGKGEIATRSSYLGGKFGGRQASKMSELNAKRAKGVELQERLFSLGSVTSPAA 369
            LR +  PK +   +++L      + + L   EKQ+++LE SYL+ET  +GN  +G+D +L S                           +  N KR++  +L++R+FSL SVTSPAA
Sbjct:    6 LRGSNNPKAM---LSSLLNKREKLQNELRSVEKQVYELETSYLQETNTFGNAFKGFDGFLSSS-------------------------KNTANIKRSRKFQLEDRVFSLSSVTSPAA 94          
BLAST of mRNA_F-serratus_M_contig8148.19562.1 vs. uniprot
Match: A0A6J1KUD2_CUCMA (chromatin modification-related protein MEAF6-like isoform X1 n=10 Tax=Cucurbitaceae TaxID=3650 RepID=A0A6J1KUD2_CUCMA)

HSP 1 Score: 59.3 bits (142), Expect = 4.970e-8
Identity = 39/108 (36.11%), Postives = 57/108 (52.78%), Query Frame = 1
Query:   82 ASVHDRLIQTEKQIFDLERSYLEETRLYGNVLQGWDAYLESKGKGKGEIATRSSYLGGKFGGRQASKMSELNAKRAKGVELQERLFSLGSVTSPAAKGIHKQEDKRRT 405
            A +HD L   EKQ++D+E +YL++    GNVL+G++ +L                         ASK S L  KR++  +L +RLFSL SVTSPAA+ +    D  R+
Sbjct:   24 AKLHDELRTIEKQVYDMETNYLQDPSQCGNVLKGFEGFLS------------------------ASKNSAL-LKRSRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRS 106          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig8148.19562.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUV8_ECTSI1.230e-5068.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KBZ7_9PHAE5.830e-3278.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A484KC30_9ASTE3.030e-1034.68Uncharacterized protein n=1 Tax=Cuscuta campestris... [more]
UPI001C277A454.500e-1035.04chromatin modification-related protein eaf6-like n... [more]
A0A022PPS1_ERYGU6.300e-1033.33Uncharacterized protein n=1 Tax=Erythranthe guttat... [more]
A0A484KJQ9_9ASTE7.500e-934.29Uncharacterized protein n=2 Tax=Cuscuta campestris... [more]
E9GD93_DAPPU1.380e-836.03Chromatin modification-related protein MEAF6 n=2 T... [more]
A0A7N0VKN8_KALFE4.700e-833.33Uncharacterized protein n=1 Tax=Kalanchoe fedtsche... [more]
A0A830BBD4_9LAMI4.880e-831.62Chromatin modification-related protein meaf6 n=1 T... [more]
A0A6J1KUD2_CUCMA4.970e-836.11chromatin modification-related protein MEAF6-like ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig8148contigF-serratus_M_contig8148:3587..9345 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score66.6
Seed ortholog evalue1.2e-08
Seed eggNOG ortholog4155.Migut.G00520.1.p
KEGG koko:K11344
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Histone acetyltransferase subunit NuA4
EggNOG OGs37UUC@33090,3GIT5@35493,44JZT@71274,KOG3856@1,KOG3856@2759
COG Functional cat.S
Best tax levelasterids
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Exons3
Model size501
Cds size501
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig8148.19562.1prot_F-serratus_M_contig8148.19562.1Fucus serratus malepolypeptideF-serratus_M_contig8148 3587..9345 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932429.9205983-CDS-F-serratus_M_contig8148:3586..38011622932429.9205983-CDS-F-serratus_M_contig8148:3586..3801Fucus serratus maleCDSF-serratus_M_contig8148 3587..3801 -
1690964305.0173604-CDS-F-serratus_M_contig8148:3586..38011690964305.0173604-CDS-F-serratus_M_contig8148:3586..3801Fucus serratus maleCDSF-serratus_M_contig8148 3587..3801 -
1622932429.9386413-CDS-F-serratus_M_contig8148:6575..66331622932429.9386413-CDS-F-serratus_M_contig8148:6575..6633Fucus serratus maleCDSF-serratus_M_contig8148 6576..6633 -
1690964305.0305004-CDS-F-serratus_M_contig8148:6575..66331690964305.0305004-CDS-F-serratus_M_contig8148:6575..6633Fucus serratus maleCDSF-serratus_M_contig8148 6576..6633 -
1622932429.9522848-CDS-F-serratus_M_contig8148:9117..93451622932429.9522848-CDS-F-serratus_M_contig8148:9117..9345Fucus serratus maleCDSF-serratus_M_contig8148 9118..9345 -
1690964305.0414472-CDS-F-serratus_M_contig8148:9117..93451690964305.0414472-CDS-F-serratus_M_contig8148:9117..9345Fucus serratus maleCDSF-serratus_M_contig8148 9118..9345 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig8148.19562.1

>prot_F-serratus_M_contig8148.19562.1 ID=prot_F-serratus_M_contig8148.19562.1|Name=mRNA_F-serratus_M_contig8148.19562.1|organism=Fucus serratus male|type=polypeptide|length=167bp
MGINTTLRPAETPKDLKKRVNALNKSLASVHDRLIQTEKQIFDLERSYLE
ETRLYGNVLQGWDAYLESKGKGKGEIATRSSYLGGKFGGRQASKMSELNA
KRAKGVELQERLFSLGSVTSPAAKGIHKQEDKRRTSGRQGDAGGSGAGSS
SSVARSSSPKKSPKSAK
back to top

mRNA from alignment at F-serratus_M_contig8148:3587..9345-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig8148.19562.1 ID=mRNA_F-serratus_M_contig8148.19562.1|Name=mRNA_F-serratus_M_contig8148.19562.1|organism=Fucus serratus male|type=mRNA|length=5759bp|location=Sequence derived from alignment at F-serratus_M_contig8148:3587..9345- (Fucus serratus male)
ATGGGTATCAATACCACGCTGAGACCTGCGGAAACTCCCAAAGATCTCAA GAAGAGAGTGAACGCGCTCAATAAATCCCTCGCCAGCGTTCACGACCGCC TTATCCAGACCGAGAAACAGATCTTCGACCTCGAGCGCAGCTATCTCGAG GAGACGAGACTCTACGGCAATGTTCTTCAGGGTTGGGACGCGTATCTTGA ATCGAAGGGCAAGGGCAAAGGGGAGATAGTTTAGGGGATCAAGAGAACAA GAAAGGACGTCGTGGATACCTATGTTGGGGCAGACGATGCAGGTACAAGT ACTACAGACAACGGTGCTCTGTAAATACAGTATAGAGTTGATGATGTCAT TCCGAAATGTTTCCGGTATTGTTTCCGTATGATGTTGTTGTTGTTGTTGT TGTTGTTGTCTTCACATTAAAAAACCGTTCCGCTCTCTGCTCAGTACCTT CCAACATCCGTACTGGTCCAACTGAAGCGAACGCCTTCCGTGGTCACAGG CTAACTTCCAAAAGGGTTATATTATGAGAAATGAACGAGAAATAAAAGGA CCCAGAGGAGTCAACACAGGCGATAATAGGAACCCCCCTCCGAAAAAAAT AAAATAAAATAAAATAATAAAACAATAAAAAGGGGATAGATAGAGCCCAT CGCTCCCACTTTTATCGCGAGGCCAAGCAAAAATTAAAACAAACGAAAAG AATCAAGGATCACCAACCAAGACACACTTGATTCTATCCTTGTACCCCTA TAGTCTATATTTTTAGCACGTTTCAAAATGTTTGAAAATTATTTTTGCTA CTTGTACCGCTATCATATAGATGCAAGTGCTTTATGTGAGAATTCAATCA AATCAATCAAAACATGCAAGTGCTGTACCACGAGCCGATTGAAGCTGAAA TCTCTGTCAGACATCCCCTATTTATAGACTAGTATTTATAAATCATTTTT ATGACATTAGTCGTTTTCAATGAACTGTAAACACACTAATTAATCGAAAA CGAGGAAAAAACAAAATAAATACAGGAGTTTAACTTAAGTGAACTTTCCA ATTTTTGGAAAGTTTGGAAAATCATTTTAGACCTAACATGTCAGCTAGTC AAGGTAAATGGTTGGAAAAGGAAACCCCGCTCAAAAAAGTATGATACGCC TCGGGACATTTTGAACACCTTTTCCCTCTTTGAACCCTCAGCCCTCAGGA CTCATGAACGCCACAGAGACACAGCAGTACACAAGAACGCCGCGAGTAGA TGTCAATAGATCGAAGAGCAGACCGCACTCGTTAGAAAAGTAGGATACAT CAGTATTTGAGAGGAGTGCCTGCGATTCTACTCCGCGATTGCATCCCGTA ACGCGACCATCGCGATGATAGAGCTTTTTAAAGTAAAAACCAGAACGCAC CTATACCTTCTGAGCTGTTGTTGGGTCTACAGCGGTACCTATTATAGTAC CGTAGTCTACATCTATTTCTATTTTCAAATTCAATTAAAAAAAATATACC TTCGTACAGATATGTTAGTAGAAAAAATCTCCCAACGTGCTGTGCTAGAC TCATTCGCGTAGCTGTATCCCTGTCACTACTTTCAACTACCTTGAGGCTC TGTGCCGGTGGACCAAATTCTCACAGGCACGAACGCGGGCAGGGAAGATA TTTTTTCCCCCTGTTCAGCTGACCACGAGCGGGATTGGCAACCTTGCCCC GTAGATCCATACTCTTGCTATATGTGTGACCATATATCCCAACTCCTTCA CCGCAGCAGCAGTAATGTACATACTCAACAAAGAGAGAAGCCCGATCAAG TTGCCGCTGGCGATAAGGAAGCTTCATCCTGCACAGATTGAGCTGACCTA TCGTTGTTTTCCCTTGCTGCAAATCCGGAGGACTGTGTACCGGGGTTGCA ACAGCACGGGCGTGTTTTTCCAAACTTTCCAACTTTCCAAATTTGGAAAT GGAGAAGCACCGACCTCGAGGTGCTCGTCCAATTCCAAATTGTGGAACGT TGGAATTTGGCAAGTTTAGAAGTTTTAGGAAATATTCCAAACTTTGCAAA CTTTTTTTGAGATCTAAAACGCCCCTTAGATGTTATCTCGGGGACAGGTT ATATTTCGAATTTGTCATATCGCCCCAAATATTCAACTGGTTATTTTAAG CCCTTGCCTCACCAATCAGCACAATGATTATGAAGAAGAAATCCGACGCC ATAGCATTGTATCCGAATGGGCGCGTTAGACAACTTCACCTGTAACCCTC GGCGGTAGAGTAGAAGAGTCTCGCCTCGTGATTGCTGCCGCTTCGCGCCA TGCAGCAGCGGTCATCGCGTTAATACTCTGCTGTACTGATAGCCATCCCT CCAACGAACATCCTCCTCCATGACCAACAGCAACACCATGCCTGCACCTC TCTGCCCCCCCCTCCGAACTGATGCAACTTCAGGCGCTTTGCGGCGCAGA GTATCTTACCGCCTTTTAGACTCAAACCGTCTGGATGTTGTACCTCTACA GCGATCGTAGTGATTATAAGTGTTGTAACAAAAGAAGATGCTCGCTCTTG TCTGGCTCCCCCAGTGTAGAGCACCCAGCATGGTCATTAATGGATATTTC GTACGATTGTAATATTTCATTCGAGTCCGTTGGCCAACCAGATTACTGTC AGGTTCCGCCGCCATAACTATGACTTCGTTCCCATGGCTTTCCACCGAAA TCTCCAGGTTAGGCCACTCGTTCTTCTTACTTAGGGGGAAAGTTTGGTGG TCGACAGGCCTCGAAAATGAGTTTTGCAGCCACTCCATTATTTTTATGGC GATCGAAAGGGGCCAATTTCAATCCCACGATTTCCATTTTGATTCCGGGT ACAGGATGGAAATTGGGCCCCAGTTCCGATCGAGATTTGGGTAGAAATCG CGAAGAGGAAAACCGATTTGTATTATCGCCGCCTTCTTGCCATTCTCCGC CGCTCCAGTTCTTTCCTCCTCCTAGCCCCATATGGAGTCCTTCGTCTACT TCCCATTTCGCGAGGCTTTCACTACTTAGGGCGGGTCTTAGATAAAAAAA GCGCAGGGAACAAGGAACGTGGAACTTCGAATCCCTCTACGATTGGCCAA CGGCAAAAAATAACTTTCCTGGAAAGAGGTACACCTGCCGCAGTTCCATG TTTGTTGTTCCCTCCGCATAAATAATTTTAAGCCTCCAGTTCCTTTTTAT TAGTGAAGAGCCCACATGGAACGGGCTGGTCGAGGACAAAAGGCTCAAAA ATTTCCAAAACAATGGTCCTCAGGCAAAATAAAATTTTCCATGCGCCAAT ACCTTCTGTGTCGTTGTGTCGAAGTTCTCAAATCGTGGCTCTACCAGACT TTTCACCTAAAACCATGTTCGACAGTTCAGCATTCCAGCTTTAGTTTTTT TTTCTGGACACAGCGTATAGAACAGGGAACGAGGAATGTTGTGTAAAGAA AAATTCCTCGTTGTTTGGCAAGTAATTCGAAGTTCCACGTTCCATGTTCC CTGCGCTTTTTTTGATCTAATACCCGCCCTTATACTAAGGTGCCGTGTTT CGAGCCCAAAGGTCCCAGCGTGTTGCCCTCCAACGAGAGGCACCGCGACG CCGGACCAATTATGGGAGACGAGCAGCATCGAGATCTCTTTAAAATGTAG TTTGCCATAATTGAGGCGGTAGCCTTCGTCAGGAGGCGAGACATCCGCCG CCGAGCGAGGATCGCGATGGGAGGGGGAGCGGTGGTAACCGCGTTTGTAT CTATCTCACTTTCGACGGATGGACCTCAACGTGCTACTGACAGGTTATCA GTCCCACCTACTATTATACTGCACGTCGCCATCCTGGCTACTGAGGTCAC AAAAAGGATCTTCCCATCTCTCACCGGCTCTCGCCTACGATTTCTTCTAT CGCGTTGCAAGTTCAGCGCTCTTCAACACCTCGTCAACCAATCATAATCA ATGACGGTTCAAATTACTTACAGTGTTCCCGTTCTCACGCTTTCCGCTAC GGAAACCAGAAGAAGGGAAACCATCCTGTCGAGAATCGAACTCACAAATT CCAGGTGAACGGTGTCGTGTACTTGGATAGTACGAAGATTTTCTTTAAAC AAGTACGCTGCAAGCTCACATGTTTTGTACATAACTTACTATTAGTACGG CCGATGAGCCTCAACGTGCTAGGTTACCAATCCCACCTACGGTACTTTCA TCATGCCCACTTCATACCAGTAGTGGCTGTGGGAAAGAGAGGCGAATATT AATTGGTCCATCGTGACCTGCCAAGGCAGCACTCGTTCGGAACTACCTTT TACTGGCCCTGTGCCGGCGGACTCTCGGCAGTGAACGCCATCGGTACGCA ACTGCGTGACCTGATAAACTCGGGACTAACCCGATGGCGTATGGCGGTTC AATATAAATGTATGGACGCCGCCGCGGAACTCGGGAGGAATCCCGTAAGT AGGCACCAGATTCAGCCTGAGTATGGAGATGAGCAGACTGACGTGGGACG GGACGGCTGAACCCGTCTCGCGAGACCAAATTCTCAGGCACGCACGGGGA CAGGGGAATATTGATTTCCCTGCTCAGCTGACCACGAGCAGGATTGGCAA CCTTACAAGGTTGATCCATAATCTGCTACCTGGTATATGTGATGACCATA CATACATACTGCAACGTTGGTTTTCACAAGAATCGAACTCACGATTTCCC CGCTAGCAGGTGTACGTGGCTACCTACTAGACCACTCCGGCGACGTTACA TAGACACGATACTCTCGGCACAGCCACCGTAGAGAGCTATTATAGGTCAT GATGAGTAACGGCGGAGTGAAAGGGCACAGCCGTCTTGGCGACCGTCCAT CGCCTCTGCTGCGTGGCGCCCTCCTGCAGGACGCTGCTGTTAAAGTATAT GTTTTGGGATGAGTTGAGGCGTCAAGGGGACTTTCCGTCGAACAAGAGCC ATCGGCCATAATTCAGCACATTACATACACATAGTCCTCGCAATCTCCTC CACTGGCTCCTGGATCGCCCGAAAATCATATAATTACGGTACATTGCGTT ACACTTTTTGTTTTCATGGCTTCAGTCGGTACCCATGATCGATTCAAGGA AATTATAATAAAAGCAAAGGTACTAGTCCTCGCAATCTCCTCCACTGGCT CCTGGATCACCCGAAAATCATATAATTACGGTACATTGCGCTTTACACTT TTTTTTCTCGTGGCTTCAGTCAGTACCCATGATCGATTCAAGGAAATTAT AATAAAAACAAAGGTACTTCTCTTGGCTGGAGGGTTTGTCAAAGTTCGTC TAAGCAACACGCCATATCTCACAATTCGCCGCATTTTCGCTTTCTTTTTT CATTTCCATTTTTTTTGGTCGAGGCACGGCACGCGGCCTCACTAACCTAA TAAAGGGCTAAATTGACAACTTGGCCTTTCCTACGTACAGAAGCAGAGTG AAACCTACCAATACGTAATACTAGCATGTGATGCGTCGAACACCGCGGCT TCCTTCCCGGTGTTGATCATATCTGGAACGCCCCTTTGCCGCAGGCGAGC TCAATGCCAAGCGCGCGAAAGGGGTGGAGCTACAGGAGCGACTGTTTTCA TTGGGTTCCGTGACTTCGCCCGCCGCGAAGGGTATCCACAAGCAGGAGGA CAAGCGCCGCACGAGCGGGAGGCAGGGGGACGCCGGAGGCAGCGGGGCGG GCTCTTCTTCCTCTGTTGCGCGGAGCTCCTCCCCGAAGAAGTCTCCCAAG TCAGCCAAG
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig8148:3587..9345-

>mRNA_F-serratus_M_contig8148.19562.1 ID=mRNA_F-serratus_M_contig8148.19562.1|Name=mRNA_F-serratus_M_contig8148.19562.1|organism=Fucus serratus male|type=CDS|length=1002bp|location=Sequence derived from alignment at F-serratus_M_contig8148:3587..9345- (Fucus serratus male)
ATGGGTATCAATACCACGCTGAGACCTGCGGAAACTCCCAAAGATCTCAA
GAAGAGAGTGAACGCGCTCAATAAATCCCTCGCCAGCGTTCACGACCGCC
TTATCCAGACCGAGAAACAGATCTTCGACCTCGAGCGCAGCTATCTCGAG
GAGACGAGACTCTACGGCAATGTTCTTCAGGGTTGGGACGCGTATCTTGA
ATCGAAGGGCAAGGGCAAAGGGGAGATAATGGGTATCAATACCACGCTGA
GACCTGCGGAAACTCCCAAAGATCTCAAGAAGAGAGTGAACGCGCTCAAT
AAATCCCTCGCCAGCGTTCACGACCGCCTTATCCAGACCGAGAAACAGAT
CTTCGACCTCGAGCGCAGCTATCTCGAGGAGACGAGACTCTACGGCAATG
TTCTTCAGGGTTGGGACGCGTATCTTGAATCGAAGGGCAAGGGCAAAGGG
GAGATAGCCACTCGTTCTTCTTACTTAGGGGGAAAGTTTGGTGGTCGACA
GGCCTCGAAAATGAGCCACTCGTTCTTCTTACTTAGGGGGAAAGTTTGGT
GGTCGACAGGCCTCGAAAATGAGCGAGCTCAATGCCAAGCGCGCGAAAGG
GGTGGAGCTACAGGAGCGACTGTTTTCATTGGGTTCCGTGACTTCGCCCG
CCGCGAAGGGTATCCACAAGCAGGAGGACAAGCGCCGCACGAGCGGGAGG
CAGGGGGACGCCGGAGGCAGCGGGGCGGGCTCTTCTTCCTCTGTTGCGCG
GAGCTCCTCCCCGAAGAAGTCTCCCAAGTCAGCCAAGGCGAGCTCAATGC
CAAGCGCGCGAAAGGGGTGGAGCTACAGGAGCGACTGTTTTCATTGGGTT
CCGTGACTTCGCCCGCCGCGAAGGGTATCCACAAGCAGGAGGACAAGCGC
CGCACGAGCGGGAGGCAGGGGGACGCCGGAGGCAGCGGGGCGGGCTCTTC
TTCCTCTGTTGCGCGGAGCTCCTCCCCGAAGAAGTCTCCCAAGTCAGCCA
AG
back to top