mRNA_F-serratus_M_contig126.1955.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig126.1955.1 vs. uniprot
Match: A0A6H5JFK2_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFK2_9PHAE) HSP 1 Score: 111 bits (278), Expect = 3.700e-24 Identity = 55/83 (66.27%), Postives = 59/83 (71.08%), Query Frame = 1
Query: 1 TEKLDIYSMGMIFWSMFGRQPPFERDHDSEYKDMVMAGLRPYVAPSWHQGFTQLFQDMWAGDPLERPTAAEVVGRLEEMLAAL 249
TEKLDIYS+G IFW+M GR+PPF RD D YK V+ G RP V PSWH F QLF DMW DP ERPTA EVV RLE M A L
Sbjct: 313 TEKLDIYSLGNIFWAMLGRKPPFVRDDD--YKGKVLRGERPKVNPSWHPEFVQLFTDMWKRDPRERPTAREVVLRLEAMYAEL 393
BLAST of mRNA_F-serratus_M_contig126.1955.1 vs. uniprot
Match: D7G774_ECTSI (Similar to TAK1 (TGF-beta-activated kinase) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G774_ECTSI) HSP 1 Score: 108 bits (270), Expect = 6.320e-24 Identity = 53/83 (63.86%), Postives = 59/83 (71.08%), Query Frame = 1
Query: 1 TEKLDIYSMGMIFWSMFGRQPPFERDHDSEYKDMVMAGLRPYVAPSWHQGFTQLFQDMWAGDPLERPTAAEVVGRLEEMLAAL 249
TEKLDIYS+G IFW+M GR+PPF+RD +YK V+ G RP V PSWH F QLF DMW DP ERP A EVV RLE M A L
Sbjct: 187 TEKLDIYSLGNIFWAMLGRKPPFKRD--DKYKARVLRGERPKVDPSWHPEFVQLFTDMWKRDPRERPNAREVVLRLEMMYAQL 267
BLAST of mRNA_F-serratus_M_contig126.1955.1 vs. uniprot
Match: D7FHD3_ECTSI (Similar to TAK1 (TGF-beta-activated kinase) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHD3_ECTSI) HSP 1 Score: 88.2 bits (217), Expect = 5.320e-16 Identity = 41/81 (50.62%), Postives = 52/81 (64.20%), Query Frame = 1
Query: 1 TEKLDIYSMGMIFWSMFG-RQPPFERDHDSEYKDMVMAGLRPYVAPSWHQGFTQLFQDMWAGDPLERPTAAEVVGRLEEML 240
TE +DIYSM ++FW + R PFE H + D+V + RP+V PSW + QL QDMW DP RP+A +VV RLEEML
Sbjct: 278 TEMVDIYSMAIVFWQLVSLRTVPFESKHRRDIPDLVASHQRPFVDPSWDPHYAQLLQDMWRTDPEMRPSARQVVARLEEML 358
BLAST of mRNA_F-serratus_M_contig126.1955.1 vs. uniprot
Match: D8LN76_ECTSI (Serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN76_ECTSI) HSP 1 Score: 82.8 bits (203), Expect = 1.090e-14 Identity = 39/79 (49.37%), Postives = 57/79 (72.15%), Query Frame = 1
Query: 1 TEKLDIYSMGMIFWSMFGRQPPFERDHDSEYKDMVMAGLRPYVAPSWHQGFTQLFQDMWAGDPLERPTAAEVVGRLEEM 237
+EK+DIY+MGMI++S+ PF D ++ ++ A LRP + PSWH+GFT++FQDMW DP RP+A +VV RLE++
Sbjct: 166 SEKVDIYAMGMIYFSLISGGVPFP-DQEA-FERAYEAKLRPEIDPSWHKGFTRIFQDMWHQDPERRPSARQVVLRLEDL 242
BLAST of mRNA_F-serratus_M_contig126.1955.1 vs. uniprot
Match: D8LMS6_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMS6_ECTSI) HSP 1 Score: 79.7 bits (195), Expect = 4.310e-14 Identity = 38/83 (45.78%), Postives = 55/83 (66.27%), Query Frame = 1
Query: 1 TEKLDIYSMGMIFWSMFGRQPPFERDHDSEYKDMVMAGLRPYVAPSWHQGFTQLFQDMWAGDPLERPTAAEVVGRLEEMLAAL 249
T +D+YSMG+IF+++ + PF + + M+ RP +AP WH+G+TQ+ QDMWA DP +RP+A EVV RLE +L L
Sbjct: 91 TFSVDVYSMGIIFYALIAGRLPFTKQGVQLVR---MSTARPEMAPWWHKGYTQVIQDMWARDPDKRPSAGEVVERLEHILEEL 170
BLAST of mRNA_F-serratus_M_contig126.1955.1 vs. uniprot
Match: A0A6H5L156_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L156_9PHAE) HSP 1 Score: 74.7 bits (182), Expect = 7.810e-13 Identity = 33/77 (42.86%), Postives = 50/77 (64.94%), Query Frame = 1
Query: 1 TEKLDIYSMGMIFWSMFGRQPPFERDHDSEYKDMVMAGLRPYVAPSWHQGFTQLFQDMWAGDPLERPTAAEVVGRLE 231
+EK+DIYS+ M F++M +PP+ + + + ++AG+ P V+ SW QGF ++ DMW DP RP+A VV RLE
Sbjct: 43 SEKIDIYSLAMTFYTMLALKPPYNGEPGARAR--ILAGIPPSVSLSWDQGFVEILGDMWQRDPKARPSARRVVERLE 117
BLAST of mRNA_F-serratus_M_contig126.1955.1 vs. uniprot
Match: D7FYC9_ECTSI (Similar to TAK1 (TGF-beta-activated kinase) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYC9_ECTSI) HSP 1 Score: 79.0 bits (193), Expect = 9.420e-13 Identity = 35/77 (45.45%), Postives = 45/77 (58.44%), Query Frame = 1
Query: 1 TEKLDIYSMGMIFWSMFGRQPPFERDHDSEYKDMVMAGLRPYVAPSWHQGFTQLFQDMWAGDPLERPTAAEVVGRLE 231
TE DIYSM M+F+S+ PPF RP V PSWH+G+ Q+ QDMW DP+ RP+A ++V RLE
Sbjct: 293 TETSDIYSMAMVFYSLLSGTPPFGGPEGLAEAFATRTQPRPLVDPSWHRGYVQIVQDMWNEDPMRRPSARQIVARLE 369
BLAST of mRNA_F-serratus_M_contig126.1955.1 vs. uniprot
Match: D8LHZ9_ECTSI (Serine/threonine-protein kinase pkn5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHZ9_ECTSI) HSP 1 Score: 75.9 bits (185), Expect = 1.820e-12 Identity = 37/79 (46.84%), Postives = 47/79 (59.49%), Query Frame = 1
Query: 1 TEKLDIYSMGMIFWSMFGRQPPFE--RDHDSEYKDMVMAGLRPYVAPSWHQGFTQLFQDMWAGDPLERPTAAEVVGRLE 231
EKLDIYS+ M+F+SM PP++ R+ KD G+ P PSWH GF + +DMW DP RP+A VV RLE
Sbjct: 132 NEKLDIYSLAMVFYSMLALHPPYQGVRNASGNIKD----GIPPPTDPSWHPGFLDIVRDMWQRDPNARPSARRVVQRLE 206
BLAST of mRNA_F-serratus_M_contig126.1955.1 vs. uniprot
Match: A0A6H5JU33_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU33_9PHAE) HSP 1 Score: 77.0 bits (188), Expect = 2.380e-12 Identity = 39/80 (48.75%), Postives = 51/80 (63.75%), Query Frame = 1
Query: 1 TEKLDIYSMGMIFWSMFGRQPPFERDHDSEYKDMVMAGL-RPYVAPSWHQGFTQLFQDMWAGDPLERPTAAEVVGRLEEM 237
TEK+DIY+MGMI++S+ PF D E D A RP + PSWH+GF ++ QDMW DP ERP A +VV RL+ +
Sbjct: 222 TEKVDIYAMGMIYYSLISGGLPFP---DVETFDEARAAHDRPEIDPSWHKGFVEIIQDMWHEDPEERPFARQVVQRLQAL 298
BLAST of mRNA_F-serratus_M_contig126.1955.1 vs. uniprot
Match: D8LN73_ECTSI (Serine/threonine/tyrosine kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN73_ECTSI) HSP 1 Score: 76.3 bits (186), Expect = 3.150e-12 Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = 1
Query: 1 TEKLDIYSMGMIFWSMFGRQPPFERDHDSEYKDMVMAGLRPYVAPSWHQGFTQLFQDMWAGDPLERPTAAEVVGRL 228
TEK DIYSMGMIF+S+ + P+ D + V G +P V PSWH+GF ++ + MW DP RP+A +VV RL
Sbjct: 185 TEKADIYSMGMIFYSVIAGRNPY--DTPEALQTAVSHGSKPEVDPSWHRGFMEVVEQMWLDDPERRPSARQVVTRL 258 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig126.1955.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig126.1955.1 >prot_F-serratus_M_contig126.1955.1 ID=prot_F-serratus_M_contig126.1955.1|Name=mRNA_F-serratus_M_contig126.1955.1|organism=Fucus serratus male|type=polypeptide|length=83bp MGMIFWSMFGRQPPFERDHDSEYKDMVMAGLRPYVAPSWHQGFTQLFQDMback to top mRNA from alignment at F-serratus_M_contig126:502785..503972+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig126.1955.1 ID=mRNA_F-serratus_M_contig126.1955.1|Name=mRNA_F-serratus_M_contig126.1955.1|organism=Fucus serratus male|type=mRNA|length=1188bp|location=Sequence derived from alignment at F-serratus_M_contig126:502785..503972+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig126:502785..503972+ >mRNA_F-serratus_M_contig126.1955.1 ID=mRNA_F-serratus_M_contig126.1955.1|Name=mRNA_F-serratus_M_contig126.1955.1|organism=Fucus serratus male|type=CDS|length=498bp|location=Sequence derived from alignment at F-serratus_M_contig126:502785..503972+ (Fucus serratus male)back to top |