prot_F-serratus_M_contig814.19555.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig814.19555.1
Unique Nameprot_F-serratus_M_contig814.19555.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length340
Homology
BLAST of mRNA_F-serratus_M_contig814.19555.1 vs. uniprot
Match: D8LM33_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM33_ECTSI)

HSP 1 Score: 399 bits (1025), Expect = 5.000e-136
Identity = 211/342 (61.70%), Postives = 267/342 (78.07%), Query Frame = 0
Query:    3 SGARVDEFDHQFNDPGEYDNSQDPASLSVVEHIRALSLRGKLTLAYIIFVLLFLLFKASWVLAFVTAVAFAISAALLLSWWSRIRFSCPLDVVVRSFGLGLIGMFWAVMFVYHLIAF-----LLVVLFGSSFFVICLIPVVFIGLEEMFKVILVLWSKRDVAIGRETKAHQISATATSLGYAIGFTFMMVIVLDINIDMGAHIKPGSVDDLEVAVICLIIVTLFGTPMHLLSGYLIGLEVTRKTAFMKAGLFTFLLRSLFMLNIILWIFLLRNWFALLIGLLITNVVICVAMVRRIKRVESTLSIEYLRRVGNLQAFGYGVLPGGDADEVEVPSTFNANNLV 339
            +GA VDEFD+Q NDPG+YDN QDPASLSVVEH+RALS+RGKLTL Y+  V++F+L+   WV+AF    +F +SAA L  WWSRIRFSCPLD+VVRSFGLG+  M W V  ++ L +      LL ++FG    V+ L  V+ +GLEEM KV+   WSKRDVAIGRETKAHQI+ATATS+GY++GF+F M+IVLD+ +D+   I+  S  D+ VA++ L+I T+FGTPMH+LSGYL+GLEVTR+T FMK  L+TFL+RSLFM+NI LW+FL   W  ++ GLL+TNV+IC AMV RIK+VE+TL +EYL+RVG LQAFGYGVLPGGD DEVE+PS  + N LV
Sbjct:    6 NGADVDEFDNQLNDPGQYDNPQDPASLSVVEHLRALSIRGKLTLLYVAGVIVFVLWALDWVIAFACMASFLVSAAPLFVWWSRIRFSCPLDLVVRSFGLGIFAMVWVVYMLFRLCSTGLMGRLLYMMFGRLVGVVVL--VILVGLEEMVKVVFARWSKRDVAIGRETKAHQIAATATSVGYSVGFSFFMIIVLDLEVDLLLGIQADSSADMIVALLALLITTMFGTPMHVLSGYLVGLEVTRQTHFMKVALYTFLIRSLFMVNIFLWVFLFGTWQPIMAGLLLTNVLICCAMVHRIKKVEATLPVEYLQRVGYLQAFGYGVLPGGDVDEVEIPSNVDVNTLV 345          
BLAST of mRNA_F-serratus_M_contig814.19555.1 vs. uniprot
Match: A0A836CLE4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLE4_9STRA)

HSP 1 Score: 168 bits (426), Expect = 1.160e-45
Identity = 132/346 (38.15%), Postives = 183/346 (52.89%), Query Frame = 0
Query:   32 VEHIRALSLRGKLTLAYIIFVLLFLLFKASWVLAFVTAVAFAISAALLLSWWSRIRFSCPLDVVVRSFGLGLIGMFWAVMFVYHLIAFLLVVLFGSSF-FVICL---IPVVFIGLEEMFKVILVLWSKRDVAIGRETKAHQISATATSLGYAIGFTFMMVIVL-----------DINIDMGAHIKPGSVDDLEVAVICLIIVTLFGTPMHLLSGYLIGLEVTRKTAFMKAGLFTFLLRSLFMLNIILWIFLLRNWFALLIGLLITNVVICVAMVRRIKRVESTLSIEYLRRVGNLQAFGYG-----------------------VLPGGDADEVEVPSTFNANNLV 339
            +E ++ALSL  KLT+ Y++      L     VL     VA A     LL WW +   +CPLD+V+RSFG+G  GM   V+    L+ F++++L   +  F+I L   +P+  +G+EE+F+V++    K  + + RET  HQI+ TATS+GYA     +  +VL           DI+ D+     P    D +VA    +I   F  P+ +L+GY+ GL  TR+  F + GL  F LRS  M+  ILW  LL +W  L I ++ TN+ I   MVRRIKRVE+ L  EY +RVG LQAFGYG                       VLPGGD DEVE+P   N   LV
Sbjct:   25 LEQLKALSLTAKLTIVYVLVCAHLTLLSRDLVLYLGCMVAHAALIIPLLKWWQKHSHACPLDMVIRSFGMGYCGMALGVVLTL-LLGFMVLILATVALPFMIVLWLGLPIYVVGIEELFRVLIARRLKSGLDMSRETITHQIAYTATSVGYAAASAALNFVVLASLEGYLAGEHDIDPDLSPDGAPAL--DFKVAAAAGLIRMAFSVPVQVLAGYMTGLNTTRRLPFKRVGLEAFALRSALMVLSILWELLLPSWLGL-IAVIGTNIGIVWLMVRRIKRVEAQLPQEYFQRVGYLQAFGYGXXXXXXXXXXXXXXXXXXXXXXXVLPGGDPDEVEIPD--NIRQLV 364          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig814.19555.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LM33_ECTSI5.000e-13661.70Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CLE4_9STRA1.160e-4538.15Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 143..168
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 246..265
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 291..339
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 271..290
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 266..270
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 94..111
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 235..245
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 64..82
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 169..190
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 191..209
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 210..234
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 59..63
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 117..142
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 112..116
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 40..58
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..39
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 83..93
NoneNo IPR availableTMHMMTMhelixcoord: 120..142
NoneNo IPR availableTMHMMTMhelixcoord: 37..56
NoneNo IPR availableTMHMMTMhelixcoord: 211..233
NoneNo IPR availableTMHMMTMhelixcoord: 94..116
NoneNo IPR availableTMHMMTMhelixcoord: 272..290
NoneNo IPR availableTMHMMTMhelixcoord: 246..268
NoneNo IPR availableTMHMMTMhelixcoord: 169..191
NoneNo IPR availableTMHMMTMhelixcoord: 60..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig814contigF-serratus_M_contig814:128085..154538 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig814.19555.1mRNA_F-serratus_M_contig814.19555.1Fucus serratus malemRNAF-serratus_M_contig814 127856..155861 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig814.19555.1 ID=prot_F-serratus_M_contig814.19555.1|Name=mRNA_F-serratus_M_contig814.19555.1|organism=Fucus serratus male|type=polypeptide|length=340bp
MISGARVDEFDHQFNDPGEYDNSQDPASLSVVEHIRALSLRGKLTLAYII
FVLLFLLFKASWVLAFVTAVAFAISAALLLSWWSRIRFSCPLDVVVRSFG
LGLIGMFWAVMFVYHLIAFLLVVLFGSSFFVICLIPVVFIGLEEMFKVIL
VLWSKRDVAIGRETKAHQISATATSLGYAIGFTFMMVIVLDINIDMGAHI
KPGSVDDLEVAVICLIIVTLFGTPMHLLSGYLIGLEVTRKTAFMKAGLFT
FLLRSLFMLNIILWIFLLRNWFALLIGLLITNVVICVAMVRRIKRVESTL
SIEYLRRVGNLQAFGYGVLPGGDADEVEVPSTFNANNLV*
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