prot_F-serratus_M_contig814.19553.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig814.19553.1
Unique Nameprot_F-serratus_M_contig814.19553.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length347
Homology
BLAST of mRNA_F-serratus_M_contig814.19553.1 vs. uniprot
Match: D8LM33_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM33_ECTSI)

HSP 1 Score: 439 bits (1130), Expect = 7.310e-152
Identity = 233/349 (66.76%), Postives = 279/349 (79.94%), Query Frame = 0
Query:    1 MISG--AGVVDEFDNQLNDPGQYDNPQDPASLSVVEHIRALSVRGKLTLVYIVFVLTYLLFRKGWVLAFVTAVAFAIAAAPLFLWWSRIRFSCPLDLVVRSFGLGLVVMFWAVMIVNYYAF-LFSVLLLGRHVKLSPSRLVSVFSLVMLVGFEEMFKVILVFWSKRDVAIGRETKAHQIAATATSLGYAVGFSFIMVILLDGSWDALEHITPGSLDDLVVAIMCLIITTLFGTPMHVLSGYLIGLEVTRQTHFMKVGLFPFLLRSLFMLNIELWLYVFDRVIFSLIGLLITNALICAAMVYRIKRVESTLPVEYLQRVGYLQAFGYGVLPGGNVDEVEVPSTVDINNLV 346
            M++G     VDEFDNQLNDPGQYDNPQDPASLSVVEH+RALS+RGKLTL+Y+  V+ ++L+   WV+AF    +F ++AAPLF+WWSRIRFSCPLDLVVRSFGLG+  M W V    Y  F L S  L+GR + +   RLV V  LV+LVG EEM KV+   WSKRDVAIGRETKAHQIAATATS+GY+VGFSF M+I+LD   D L  I   S  D++VA++ L+ITT+FGTPMHVLSGYL+GLEVTRQTHFMKV L+ FL+RSLFM+NI LW+++F      + GLL+TN LIC AMV+RIK+VE+TLPVEYLQRVGYLQAFGYGVLPGG+VDEVE+PS VD+N LV
Sbjct:    1 MLAGRNGADVDEFDNQLNDPGQYDNPQDPASLSVVEHLRALSIRGKLTLLYVAGVIVFVLWALDWVIAFACMASFLVSAAPLFVWWSRIRFSCPLDLVVRSFGLGIFAMVWVV----YMLFRLCSTGLMGRLLYMMFGRLVGVVVLVILVGLEEMVKVVFARWSKRDVAIGRETKAHQIAATATSVGYSVGFSFFMIIVLDLEVDLLLGIQADSSADMIVALLALLITTMFGTPMHVLSGYLVGLEVTRQTHFMKVALYTFLIRSLFMVNIFLWVFLFGTWQPIMAGLLLTNVLICCAMVHRIKKVEATLPVEYLQRVGYLQAFGYGVLPGGDVDEVEIPSNVDVNTLV 345          
BLAST of mRNA_F-serratus_M_contig814.19553.1 vs. uniprot
Match: A0A836CLE4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLE4_9STRA)

HSP 1 Score: 167 bits (423), Expect = 3.890e-45
Identity = 130/341 (38.12%), Postives = 177/341 (51.91%), Query Frame = 0
Query:   33 VEHIRALSVRGKLTLVYIVFVLTYLLFRKGWVLAFVTAVAFAIAAAPLFLWWSRIRFSCPLDLVVRSFGLGLVVMFWAVMIVNYYAFLFSVLLLGRHVKLSPSRLVSVFSL-VMLVGFEEMFKVILVFWSKRDVAIGRETKAHQIAATATSLGYAVG---FSFIMVILLDGSWDALEHITPG-SLD-----DLVVAIMCLIITTLFGTPMHVLSGYLIGLEVTRQTHFMKVGLFPFLLRSLFMLNIELWLYVFDRVIFSLIGLLITNALICAAMVYRIKRVESTLPVEYLQRVGYLQAFGYG-----------------------VLPGGNVDEVEVPSTV 340
            +E ++ALS+  KLT+VY++      L  +  VL     VA A    PL  WW +   +CPLD+V+RSFG+G   M   V++     F+  VL+L       P  +V    L + +VG EE+F+V++    K  + + RET  HQIA TATS+GYA      +F+++  L+G       I P  S D     D  VA    +I   F  P+ VL+GY+ GL  TR+  F +VGL  F LRS  M+   LW  +    +  LI ++ TN  I   MV RIKRVE+ LP EY QRVGYLQAFGYG                       VLPGG+ DEVE+P  +
Sbjct:   25 LEQLKALSLTAKLTIVYVLVCAHLTLLSRDLVLYLGCMVAHAALIIPLLKWWQKHSHACPLDMVIRSFGMGYCGMALGVVLTLLLGFM--VLILATVAL--PFMIVLWLGLPIYVVGIEELFRVLIARRLKSGLDMSRETITHQIAYTATSVGYAAASAALNFVVLASLEGYLAGEHDIDPDLSPDGAPALDFKVAAAAGLIRMAFSVPVQVLAGYMTGLNTTRRLPFKRVGLEAFALRSALMVLSILWELLLPSWL-GLIAVIGTNIGIVWLMVRRIKRVEAQLPQEYFQRVGYLQAFGYGXXXXXXXXXXXXXXXXXXXXXXXVLPGGDPDEVEIPDNI 360          
BLAST of mRNA_F-serratus_M_contig814.19553.1 vs. uniprot
Match: A0A0H5QPC6_9EUKA (Uncharacterized protein n=2 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5QPC6_9EUKA)

HSP 1 Score: 67.8 bits (164), Expect = 4.790e-9
Identity = 56/196 (28.57%), Postives = 95/196 (48.47%), Query Frame = 0
Query:  143 LVMLVGFEEMFKVIL----VFWSKRDVAIGRETKAHQIA-----ATATSLGYAVGFSFIMVILLDGSWDALEHITPGSLDDLVVAIMCLIITTLFGTPMHVLSGYLIGLEVTRQT------HFMKVGLFPFLLRSLFMLNIELWLYVFDRVIFSLIGLLITNALICAAMVYRIKRVESTLPVEYLQRVGYLQAFGY 323
            L++ V  EE+FK ++    V  ++ D A  RET+  ++      AT+ SLGY+         LL       E +T      + + ++  ++  L   P HV+SGYLIGL+++R+T      H + +   P L R+ F+  +  W    +      +G ++T+ LI     Y I+ ++  LP+EYL+  GY    GY
Sbjct:  143 LLLQVSAEEIFKYVMMKKKVEMTESDDAHVRETQLCRLRNSLFMATSFSLGYSTYQGLATSALLSQ-----ESVT------IWIPLLISVLVALLYIPSHVMSGYLIGLQLSRRTVLNENIHAIVILTTPILFRTCFLFQLFFWAGKQEH---RFLGWVVTSVLISVVFAYYIRHIKKKLPIEYLESAGYSTLLGY 324          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig814.19553.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LM33_ECTSI7.310e-15266.76Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CLE4_9STRA3.890e-4538.12Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A0H5QPC6_9EUKA4.790e-928.57Uncharacterized protein n=2 Tax=Spongospora subter... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..40
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 65..84
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 217..241
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 299..346
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 173..197
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 119..137
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 85..95
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 41..59
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 138..161
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 198..216
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 96..118
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 60..64
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 279..298
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 162..172
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 253..273
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 274..278
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 242..252
NoneNo IPR availableTMHMMTMhelixcoord: 62..84
NoneNo IPR availableTMHMMTMhelixcoord: 138..160
NoneNo IPR availableTMHMMTMhelixcoord: 215..240
NoneNo IPR availableTMHMMTMhelixcoord: 173..195
NoneNo IPR availableTMHMMTMhelixcoord: 96..118
NoneNo IPR availableTMHMMTMhelixcoord: 253..275
NoneNo IPR availableTMHMMTMhelixcoord: 279..298

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig814contigF-serratus_M_contig814:42220..51030 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig814.19553.1mRNA_F-serratus_M_contig814.19553.1Fucus serratus malemRNAF-serratus_M_contig814 40345..51212 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig814.19553.1 ID=prot_F-serratus_M_contig814.19553.1|Name=mRNA_F-serratus_M_contig814.19553.1|organism=Fucus serratus male|type=polypeptide|length=347bp
MISGAGVVDEFDNQLNDPGQYDNPQDPASLSVVEHIRALSVRGKLTLVYI
VFVLTYLLFRKGWVLAFVTAVAFAIAAAPLFLWWSRIRFSCPLDLVVRSF
GLGLVVMFWAVMIVNYYAFLFSVLLLGRHVKLSPSRLVSVFSLVMLVGFE
EMFKVILVFWSKRDVAIGRETKAHQIAATATSLGYAVGFSFIMVILLDGS
WDALEHITPGSLDDLVVAIMCLIITTLFGTPMHVLSGYLIGLEVTRQTHF
MKVGLFPFLLRSLFMLNIELWLYVFDRVIFSLIGLLITNALICAAMVYRI
KRVESTLPVEYLQRVGYLQAFGYGVLPGGNVDEVEVPSTVDINNLV*
back to top