mRNA_F-serratus_M_contig8132.19551.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig8132.19551.1 vs. uniprot
Match: A0A6H5JET4_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JET4_9PHAE) HSP 1 Score: 128 bits (322), Expect = 2.830e-32 Identity = 66/105 (62.86%), Postives = 75/105 (71.43%), Query Frame = 1
Query: 10 GLLIKLDPFHAMQRLSKLVLKSHGACRAFLTRLRDAFFKVYRSDLEEVETALRQQGKSDAETETIKEQTWGYFLSLCRRFISPSDELLERFNLVVRVYCHLLDSK 324
GL++KLD FHAMQR+SKL+LKSHGACRA+L RLRDAFFKV DL VE ALRQ G S E E K + W YFL CRR I ELLERF+LV +Y L+D K
Sbjct: 701 GLVVKLDTFHAMQRVSKLILKSHGACRAYLARLRDAFFKVNAEDLAAVEAALRQAGMSKEEVEAKKAKDWVYFLKRCRRLIPRPAELLERFDLVNNLYGGLIDKK 805
BLAST of mRNA_F-serratus_M_contig8132.19551.1 vs. uniprot
Match: D7FIV1_ECTSI (Similar to Werner syndrome protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV1_ECTSI) HSP 1 Score: 102 bits (254), Expect = 4.100e-23 Identity = 48/108 (44.44%), Postives = 71/108 (65.74%), Query Frame = 1
Query: 1 QEFGLLIKLDPFHAMQRLSKLVLKSHGACRAFLTRLRDAFFKVYRSDLEEVETALRQQGKSDAETETIKEQTWGYFLSLCRRFISPSDELLERFNLVVRVYCHLLDSK 324
++ L ++LD FHA+QR+S+L KSHGA + F+ RLRDA F V + D++EVE AL +G + K++ W YFL CRR + LLERFN V+ +C+++D+K
Sbjct: 494 EQCALQVRLDIFHALQRISRLCKKSHGAFKPFMARLRDACFIVNQDDIKEVEQALGSKGMTPEAVAEYKDKNWTYFLRNCRRLVPERQRLLERFNSVINQFCNVVDAK 601
BLAST of mRNA_F-serratus_M_contig8132.19551.1 vs. uniprot
Match: A0A1Y2A9B5_9FUNG (3'-5' exonuclease domain-containing protein n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2A9B5_9FUNG) HSP 1 Score: 102 bits (253), Expect = 5.580e-23 Identity = 50/106 (47.17%), Postives = 69/106 (65.09%), Query Frame = 1
Query: 7 FGLLIKLDPFHAMQRLSKLVLKSHGACRAFLTRLRDAFFKVYRSDLEEVETALRQQGKSDAETETIKEQTWGYFLSLCRRFISPSDELLERFNLVVRVYCHLLDSK 324
F L ++LD FHAM R++K +LKSHGA + F+ RLRDAFF + + DL+ V AL+ G SD E E K+ W +FL C R I +ELL+R++ V + +LDSK
Sbjct: 431 FILKVRLDCFHAMNRINKTLLKSHGAYKPFMARLRDAFFLISKDDLDLVVAALKTAGLSDDEIEAKKDYDWAFFLKYCHRLIPCKEELLKRYDFVCNTFQDILDSK 536
BLAST of mRNA_F-serratus_M_contig8132.19551.1 vs. uniprot
Match: D7FIV2_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV2_ECTSI) HSP 1 Score: 101 bits (252), Expect = 7.780e-23 Identity = 47/108 (43.52%), Postives = 72/108 (66.67%), Query Frame = 1
Query: 1 QEFGLLIKLDPFHAMQRLSKLVLKSHGACRAFLTRLRDAFFKVYRSDLEEVETALRQQGKSDAETETIKEQTWGYFLSLCRRFISPSDELLERFNLVVRVYCHLLDSK 324
++ L ++LD FHA+QR+S+L KSHGA + F+ RL+DA F V + D++EVE AL +G + K+++W YFL CRR + LLERFN V+ +C+++D+K
Sbjct: 780 EQCALQVRLDIFHALQRISRLCKKSHGAFKPFMARLKDACFIVNQDDIKEVEQALGSKGMTPEAVAEYKDKSWTYFLRNCRRLVPERQRLLERFNSVINQFCNVVDAK 887
BLAST of mRNA_F-serratus_M_contig8132.19551.1 vs. uniprot
Match: A0A6H5KEU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEU8_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 1.670e-21 Identity = 53/95 (55.79%), Postives = 61/95 (64.21%), Query Frame = 1
Query: 40 AMQRLSKLVLKSHGACRAFLTRLRDAFFKVYRSDLEEVETALRQQGKSDAETETIKEQTWGYFLSLCRRFISPSDELLERFNLVVRVYCHLLDSK 324
A +SKL+LKSHGACRA+L RLRD FFKV DL VE ALRQ G S E E K + W FL CRR I ELL+RF++V +Y LLD K
Sbjct: 313 AAGEVSKLILKSHGACRAYLARLRDEFFKVNAEDLAAVEAALRQAGMSKEEVEAKKGKDWVLFLKRCRRLIPRPAELLKRFDVVNNLYGGLLDKK 407
BLAST of mRNA_F-serratus_M_contig8132.19551.1 vs. uniprot
Match: D7G3Q9_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Q9_ECTSI) HSP 1 Score: 97.4 bits (241), Expect = 2.350e-21 Identity = 45/101 (44.55%), Postives = 67/101 (66.34%), Query Frame = 1
Query: 19 IKLDPFHAMQRLSKLVLKSHGACRAFLTRLRDAFFKVYRSDLEEVETALRQQGKSDAETETIKEQTWGYFLSLCRRFISPSDELLERFNLVVRVYCHLLDS 321
++LD FHA+ RLS+ + K HGA R + RLRDA F V R D+ ++E L ++G S A+ + K+Q W YFL CRR + P ELL+RF+ VV+ + + +D+
Sbjct: 545 VRLDLFHALNRLSRTIKKGHGAFRPIMARLRDACFLVNRDDVLQIEKVLERRGMSPAQVQQAKDQDWSYFLRKCRRLVPPPSELLKRFDKVVQEFGNCVDN 645
BLAST of mRNA_F-serratus_M_contig8132.19551.1 vs. uniprot
Match: A0A6H5KLP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLP1_9PHAE) HSP 1 Score: 93.6 bits (231), Expect = 5.230e-20 Identity = 50/110 (45.45%), Postives = 69/110 (62.73%), Query Frame = 1
Query: 4 EFGLLIKLDPFHAMQRLSKLVLKSHGACRAFLTRLRDAFFKVYRSDLEE---VETALRQQGKSDAETETIKEQTWGYFLSLCRRFISPSDELLERFNLVVRVYCHLLDSK 324
E L ++LD FHA+QR+SKL KSHGA R F+ RLRDA F V D++E VE AL +G + K++ W +F+ CRR + LLERFNLV+R + ++D+K
Sbjct: 173 ESALKVRLDIFHALQRVSKLCKKSHGAFRPFMARLRDACFIVNLDDIKEASAVEQALAGKGMTPEAVVEYKDKNWTFFVRNCRRLVPEQKRLLERFNLVIRQFQDVVDAK 282
BLAST of mRNA_F-serratus_M_contig8132.19551.1 vs. uniprot
Match: A0A6H5JPK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPK9_9PHAE) HSP 1 Score: 92.4 bits (228), Expect = 1.200e-19 Identity = 49/110 (44.55%), Postives = 69/110 (62.73%), Query Frame = 1
Query: 4 EFGLLIKLDPFHAMQRLSKLVLKSHGACRAFLTRLRDAFFKVYRSDLEE---VETALRQQGKSDAETETIKEQTWGYFLSLCRRFISPSDELLERFNLVVRVYCHLLDSK 324
E L ++LD FHA+QR+SKL KSHGA + F+ RLRDA F V D++E VE AL +G + K++ W +F+ CRR + LLERFNLV+R + ++D+K
Sbjct: 173 ESALKVRLDIFHALQRVSKLCKKSHGAFKPFMARLRDACFIVNLDDIKEASAVEQALAGKGMTPEAVVEYKDKNWTFFVRNCRRLVPEQKRLLERFNLVIRQFQDVVDAK 282
BLAST of mRNA_F-serratus_M_contig8132.19551.1 vs. uniprot
Match: A0A6H5JRJ6_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ6_9PHAE) HSP 1 Score: 79.3 bits (194), Expect = 5.320e-15 Identity = 41/114 (35.96%), Postives = 62/114 (54.39%), Query Frame = 1
Query: 19 IKLDPFHAMQRLSKLVLKSHGACRAFLTRLRDAFFKVYRSDLEE-------------VETALRQQGKSDAETETIKEQTWGYFLSLCRRFISPSDELLERFNLVVRVYCHLLDS 321
++LDPFH + R+S++ KSHGA + F+ RLRDA F V R D+ + VE L +G E + + EQ W +FL RR + D LL+RF+ V+ + +D+
Sbjct: 488 VRLDPFHTLNRISRMTKKSHGAFKPFMARLRDACFLVNRDDVYQASLKPFGWIWERSVEMTLEARGMKPEEVQQLTEQNWSFFLRSSRRLVPRRDVLLKRFDRVIEEFGGCVDN 601
BLAST of mRNA_F-serratus_M_contig8132.19551.1 vs. uniprot
Match: A0A6H5JYR4_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYR4_9PHAE) HSP 1 Score: 70.9 bits (172), Expect = 4.780e-12 Identity = 41/99 (41.41%), Postives = 56/99 (56.57%), Query Frame = 1
Query: 10 GLLIKLDPFHAMQRLSKLVLKSHGACRAFLTRLRDAFFKVYRSDLEE---VETALRQQGKSDAETETIKEQTWGYFLSLCRRFISPSDELLERFNLVVR 297
L ++LD FHA+QR+S+L HGA + F+ RLRDA F V D++E VE AL QG + K++ W YFL CRR + P + L L +R
Sbjct: 496 ALNVRLDIFHALQRISRLCKTKHGAFKPFMARLRDACFIVNADDVKEASAVERALEGQGMTSEAIAEYKDKNWTYFLRNCRRLV-PEPKRLNTRTLQLR 593 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig8132.19551.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig8132.19551.1 >prot_F-serratus_M_contig8132.19551.1 ID=prot_F-serratus_M_contig8132.19551.1|Name=mRNA_F-serratus_M_contig8132.19551.1|organism=Fucus serratus male|type=polypeptide|length=108bp QEFGLLIKLDPFHAMQRLSKLVLKSHGACRAFLTRLRDAFFKVYRSDLEEback to top mRNA from alignment at F-serratus_M_contig8132:9532..9940+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig8132.19551.1 ID=mRNA_F-serratus_M_contig8132.19551.1|Name=mRNA_F-serratus_M_contig8132.19551.1|organism=Fucus serratus male|type=mRNA|length=409bp|location=Sequence derived from alignment at F-serratus_M_contig8132:9532..9940+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig8132:9532..9940+ >mRNA_F-serratus_M_contig8132.19551.1 ID=mRNA_F-serratus_M_contig8132.19551.1|Name=mRNA_F-serratus_M_contig8132.19551.1|organism=Fucus serratus male|type=CDS|length=648bp|location=Sequence derived from alignment at F-serratus_M_contig8132:9532..9940+ (Fucus serratus male)back to top |