mRNA_F-serratus_M_contig813.19550.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig813.19550.1
Unique NamemRNA_F-serratus_M_contig813.19550.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig813.19550.1 vs. uniprot
Match: A0A6H5JD90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD90_9PHAE)

HSP 1 Score: 267 bits (682), Expect = 2.540e-76
Identity = 149/316 (47.15%), Postives = 199/316 (62.97%), Query Frame = 1
Query:  205 RKPAAALALLLTKQLQFLCMLSLVDYISTANYVFTDFVVGLRWVNLWWEPDFAREVTEGRCLDPSEASDLGPLVFLGNLLLVGSMLTGVFALHVVIISAVEAFWLTRSRARTFIASARRRGMPMEEVRIQMLTGR--RPSPSGEVLLPTWGSFGDT--SDGEEKSEDEQEKRALAMVTVATAQDLSPLTVCRDKSQSMWLHYPHLELLVLFYAFEGTVSSLASVIKAASNCDEFIYPAILILLLYPLLMFVTVWRTIVVRVHPDTLLVFKRFTNDPGGAN---GIRGFVSRFKSGWDRGSSIFSWADKGQWETITT 1131
            R+P+A LA +L  QLQFL MLSLVDY+ +      DFVVGLRW+NLWW  D   ++    C+  + AS++G LVF+GNL LV  +L  +F LHV ++S  EA WLT+ RAR  +  ARRR  P+ E+  +   GR  R +  G      + S   +   DG +++++E+  R L  V + +   LSP+ +CR+ S S WLH+PH+EL+ LF+AFEG V+S AS I+  S C E  Y AI  ++LYPLLMF TV RT+ VRV PD LL+FK +  D    N   G  GF+SRFKS W    S+FSWADKGQWET+ T
Sbjct: 1419 RRPSATLAFVLMTQLQFLAMLSLVDYVVSQGSWLADFVVGLRWINLWWPADIGEDIASDGCIFETGASEIGALVFVGNLALVLGILLAIFFLHVAVVSGAEALWLTKKRARENLDGARRRNTPISELLARFRGGRIIRQTNPGLTDPSPFASRNPSLVRDGSQRTDEEEGGREL--VPMCSENRLSPVAMCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRN-SECPEMFYTAIAAMVLYPLLMFATVVRTLFVRVRPDELLIFKTYDEDGTNGNTPNGRGGFLSRFKSSWAENYSLFSWADKGQWETVQT 1731          
BLAST of mRNA_F-serratus_M_contig813.19550.1 vs. uniprot
Match: D7FWS4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWS4_ECTSI)

HSP 1 Score: 265 bits (676), Expect = 1.480e-75
Identity = 149/328 (45.43%), Postives = 199/328 (60.67%), Query Frame = 1
Query:  193 HATIRKPAAALALLLTKQLQFLCMLSLVDYISTANYVFTDFVVGLRWVNLWWEPDFAREVTEGRCLDPSEASDLGPLVFLGNLLLVGSMLTGVFALHVVIISAVEAFWLTRSRARTFIASARRRGMPMEEVRIQMLTGR----------RPSPSGEVLLPTWGSFGDTSDGEEKSEDEQEKRALAMVTVATAQDLSPLTVCRDKSQSMWLHYPHLELLVLFYAFEGTVSSLASVIKAASNCDEFIYPAILILLLYPLLMFVTVWRTIVVRVHPDTLLVFKRFTNDPGGANG-----IRGFVSRFKSGWDRGSSIFSWADKGQWETITT 1131
            HA+ R+P+A LA +L  QLQFL  LSLVDY+   +    DFV GLRW+NLWW  +  + +    C   + AS +G LVF+GNL LV  +L  +F +HV  +S VEA WLT+ RAR  + +ARRRG P+ E++ ++  GR           PSP      P       T   EE    ++E+    +V + +   LSP+  CR+ S S WLH+PH+EL+ LF+AFEG V+S AS I+  S C E  Y AI  ++LYPLLMFVTV+RT++VRV P+ LL+FK +  D  G NG       G +SRFKS W    S+FSWADKGQWET+ T
Sbjct: 1186 HASNRRPSATLAFVLMTQLQFLATLSLVDYVMDEDSWLADFVTGLRWINLWWPAEVGQNIASDECAFEAGASGIGALVFVGNLALVIGILLAIFFMHVAAVSGVEALWLTKKRARENLDAARRRGAPIGELQARLRGGRIICRTNPDLADPSPFARQA-PQPSGTPSTLHEEESDMSDEEEGGRGLVPMRSENRLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRN-SECPEIFYTAIAAMVLYPLLMFVTVFRTLLVRVRPNVLLIFKTYAED--GTNGDAPSRAGGLLSRFKSSWAENYSLFSWADKGQWETVQT 1509          
BLAST of mRNA_F-serratus_M_contig813.19550.1 vs. uniprot
Match: D8LLG6_ECTSI (Mucin-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG6_ECTSI)

HSP 1 Score: 263 bits (672), Expect = 5.480e-75
Identity = 145/314 (46.18%), Postives = 194/314 (61.78%), Query Frame = 1
Query:  205 RKPAAALALLLTKQLQFLCMLSLVDYISTANYVFTDFVVGLRWVNLWWEPDFAREVTEGRCLDPSEASDLGPLVFLGNLLLVGSMLTGVFALHVVIISAVEAFWLTRSRARTFIASARRRGMPMEEVRIQMLTGR--RPSPSGEVLLPTWGSFGDTSDGEEKSEDEQEKRALAMVTVATAQDLSPLTVCRDKSQSMWLHYPHLELLVLFYAFEGTVSSLASVIKAASNCDEFIYPAILILLLYPLLMFVTVWRTIVVRVHPDTLLVFKRFTNDP--GGANGIRG-FVSRFKSGWDRGSSIFSWADKGQWETITT 1131
            R+P+A LA +L  QLQFL MLSLVDY+ +      DFVVGLRW+NLWW  +   ++    C+  + AS++G LVF+GNL LV  +L  +F LHV ++S  EA WLT+ RAR  +  ARRR  P+ E+  +   GR  R +  G      +GS   +   +     ++E+    +V + +   LSP+  CR+ S S WLH+PH+EL+ LF+AFEG V+S AS I+  S C E  Y AI  ++LYPLLMF TV RT+ VRV PD LL+FK +  D   G A   RG F+S FKS W    S+FSWADKGQWET+ T
Sbjct: 1378 RRPSATLAFVLMTQLQFLAMLSLVDYVVSQGSWLADFVVGLRWINLWWPAEIGEDIVSDGCIFETGASEIGALVFVGNLALVLGILLAIFFLHVAVVSGAEALWLTKKRARENLDGARRRNTPISELLARFRGGRMIRRTNPGLTDPSPFGSRNPSLVRDRSQRTDEEEGGRGLVPMCSENQLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRN-SECPEMFYTAIAAMVLYPLLMFATVVRTLFVRVRPDELLIFKTYDEDGTNGNAPNCRGGFLSHFKSSWAENYSLFSWADKGQWETVQT 1690          
BLAST of mRNA_F-serratus_M_contig813.19550.1 vs. uniprot
Match: A0A6H5JR60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR60_9PHAE)

HSP 1 Score: 233 bits (594), Expect = 1.590e-66
Identity = 138/328 (42.07%), Postives = 192/328 (58.54%), Query Frame = 1
Query:  196 ATIRKPAAALALLLTKQLQFLCMLSLVDYISTANYVFTDFVVGLRWVNLWWEPDFAREVTEGRCLDPSEASDLGPLVFLGNLLLVGSMLTGVFALHVVIISAVEAFWLTRSRARTFIASARRRGMPMEEVRIQMLTGRR-----------PSPSGEVLLPTWGSFGDTSDGEEKSEDEQEKRALAMVTVATAQDLSPLTVCRDKSQSMWLHYPHLELLVLFYAFEGTVSSLASVIKAASNCDEFIYPAILILLLYPLLMFVTVWRTIVVRVHPDTLLVFKRFTNDPGGANG-----IRGFVSRFKSGWDRGSSIFSWADKGQWETITT 1131
            A+ R+P+A L  +L  QLQFL  LSLVDY+   +    DFV GLRW+NLWW  +  + +        + AS +  LVF+GN+ LV  +L  +F +HV  +S VEA WLT+  AR  + +ARRRG P+ E++ + L G R           PSP         G+   T + EE    ++E+     V + +   L+P+  CR+ S S WLH+PH+EL+  F+AFEG V+S AS I+    C +  Y AI  ++L PLLMFVTV+RT++VRV P+ LL+FK +    GG +G       GF+SRFKS W+   S+FSWADK QWET  T
Sbjct:  207 ASNRRPSATLTFVLMTQLQFLATLSLVDYVMDEDSWLADFVTGLRWINLWWLAEVGQNIASDESAFEAGASGIRALVFVGNVALVKGILLAIFFIHVAAVSGVEALWLTKKPARENLDAARRRGAPIGELQAR-LRGVRIICRTNPDLADPSPFSRQAPHASGTLS-TLNEEESDMSDEEEGGRGRVPMRSENRLNPVATCREHSTSAWLHFPHVELVFQFFAFEGAVASFASAIRNY-ECPKIFYTAIAAMVLCPLLMFVTVFRTLLVRVRPNVLLIFKTYAE--GGTSGDAPSRAGGFLSRFKSSWEENYSLFSWADKRQWETAQT 529          
BLAST of mRNA_F-serratus_M_contig813.19550.1 vs. uniprot
Match: A0A6H5J9C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9C2_9PHAE)

HSP 1 Score: 187 bits (475), Expect = 1.010e-49
Identity = 123/344 (35.76%), Postives = 176/344 (51.16%), Query Frame = 1
Query:  196 ATIRKPAAALALLLTKQLQFLCMLSLVDYISTANYVFTDFVVGLRWVNLWWEPDFAREV-----------------TEGRCLDPSEASDLGPLVFLGNLLLVGSMLTGVFALHVVIISAVEAFWLTRSRARTFIASARRRGMPMEEVRIQMLTGRRPSPSGEVLLPTWGSFGDTSDGEEKSEDEQEKRALAMV---------------TVATAQDLSPLTVCRDKSQSMWLHYPHLELLVLFYAFEGTVSSLASVIKAASNCDEFIYPAILILLLYPLLMFVTVWRTIVVRVHPDTLLVFKRFTNDPGGANGIRGFVSRFKSGWDRGSSIFSWADKGQWETITT 1131
            +T R P+A +A +LT Q+QFL  LS VD        F+D    LRWVNLW    F+  +                 T    +  +  S++G L+F+GNL L   +L  +F  HV++ S VEA+W+ + RAR  I+ + RRG+ + E+ I +       P+    +    S G  S G  +S    E++A++                        +  ++ CR+ SQS WLHYPHLEL+ LF+AFEG V+S  + +++A N    +Y A+  L+LYPLLM V V RT  V V PD L+VF     +   A G    +SR  SG     S+FSWADKGQWET+ T
Sbjct:  139 STCRSPSATMAFVLTSQIQFLATLSFVDTTGAEESAFSDLTNNLRWVNLWPSESFSEGIASRIISDEPDQPSDEDDTTPSAISQTVTSNVGSLLFMGNLALFSGLLVIIFTSHVLVASVVEAYWVAKQRARKVISRSLRRGLSLSEIPIALSGTWSQQPT----MDDGSSAGSQSSGIMQSPQRMERQAVSPYDGGDSKSDEEEGGPRNTRPGNSIGQVSDCRELSQSPWLHYPHLELIFLFFAFEGAVTSQMAALRSA-NSSTILYAAVATLVLYPLLMVVMVARTHRVWVQPDALIVFASSETEEALA-GKPSTLSRTVSGLKNDFSLFSWADKGQWETVQT 476          
BLAST of mRNA_F-serratus_M_contig813.19550.1 vs. uniprot
Match: D7G1L9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L9_ECTSI)

HSP 1 Score: 180 bits (457), Expect = 1.110e-47
Identity = 121/341 (35.48%), Postives = 185/341 (54.25%), Query Frame = 1
Query:  193 HATIRKPAAALALLLTKQLQFLCMLSLVDYISTANYVFTDFVVGLRWVNLWWEPDFAREVTEG-----------RC-LDPSEASDLGPLVFLGNLLLVGSMLTGVFALHVVIISAVEAFWLTRSRARTFIASARRRGMPMEEVRIQMLTGRRPSPSGEVLLPTWGSFGDTSDGEEKSEDEQEKRALAMVTVAT--AQDLSP-----------LTVCRDKSQSMWLHYPHLELLVLFYAFEGTVSSLASVIKAASNCDEFIYPAILILLLYPLLMFVTVWRTIVVRVHPDTLLVFKRFTNDPG-GANGI--RGFVSRFKSGWDRGSSIFSWADKGQWETITT 1131
            H ++R P+  +A+LL  Q+QFL  LSLVD     + + ++    LRWVNLW      R  + G            C ++P+ ASD+G LVFLGN+ L  S+L G+  +H+V++SAVEA+WL++ RA   +  A+RRG+P+  +  +  +    SP  E   P   +   ++DG       +E  A   V V     +D  P           L  CR +S S+WL++PH+ELL L +AFEG ++S  + ++    C    Y A   L++YP+LM +  +RT  VRV PDTL+VFK    +   G +G   R F+S+ ++G     S+F+WA+ G WET+ T
Sbjct:   42 HVSVRAPSVTIAVLLLTQIQFLATLSLVDSTGAEDSLLSELTQNLRWVNLWPPDSVGRTFSSGGERLFQQDGSRACGIEPTSASDIGALVFLGNIGLFTSLLLGIVVIHIVLVSAVEAYWLSKERAMEELTKAQRRGIPIRGLGARRASRVAHSPDAESD-PDELAASASNDGAMS----REHAAADSVDVGVDFEEDGIPIRSRPKGLRAMLADCRYRSSSVWLYFPHIELLFLLFAFEGAMASQLATMRGG-GCPWVFYSACASLVVYPVLMIILSYRTHRVRVAPDTLIVFKPVGEEENHGTDGTVPRSFLSKVRTGLKEDHSMFAWANTGAWETVET 376          
BLAST of mRNA_F-serratus_M_contig813.19550.1 vs. uniprot
Match: A0A6H5JZX1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZX1_9PHAE)

HSP 1 Score: 167 bits (423), Expect = 6.600e-42
Identity = 123/360 (34.17%), Postives = 179/360 (49.72%), Query Frame = 1
Query:  196 ATIRKPAAALALLLTKQLQFLCMLSLVDYISTANYVFTDFVVGLRWVNLWWEPDFAREV-------------------------TEGRCLDPSEASDLGPLVFLGNLLLVGSMLTGVFALHVVIISAVEAFWLTRSRARTFIAS-----ARRRGMPMEEVRIQMLTGRRPSPSGE-----------------VLLPTWGSFGDTSDGEEKSEDEQEKRALAMVTVATAQDLSPLTVCRDKSQSMWLHYPHLELLVLFYAFEGTVSSLASVIKAASNCDEFIYPAILILLLYPLLMFVTVWRTIVVRVHPDTLLVFKRFTNDPGGANGIRGFVSRFKSGWDRGSSIFSWADKGQWETITTS 1134
            +T R P++ +A LLT Q+QF+  LSLVD     +   + F   LRWVNLW    F+  V                         T  R +  S   DLG L+F+GNL L   +L  +F+LH+++ SA+EA WL + R    ++      A   G+ + E+   +L  R   PS +                 +  P+    G +  G+ +S + +  R  A    +  + L     CR  SQS WLHYPHLEL+ LF+AFEG V+S  S +++ S+  +  Y A++ L+LYP+LMF  V RT  VRV  D L+VF    N      G + F S+  +G  +  S+F+WADKGQWET+ TS
Sbjct:   14 STFRNPSSTMAFLLTSQVQFIATLSLVDNTGAEDSALSGFANILRWVNLWPSESFSEGVASRIFPSEPDKIYGEDDGXXXXXXXTTKRGISVSFTHDLGSLLFMGNLALFAGLLVIIFSLHILVASAIEAHWLAKVRNGPTLSCREASRALGHGLSLGELSTALLDTRSQQPSLDRGSSAGRQSSDTVQSHSLRGPSTPFRGSSDSGDLESNEGEGGRTNARQRKSMGRVLE----CRQLSQSPWLHYPHLELIFLFFAFEGAVTSQVSALRSTSS-SKLYYAALVTLVLYPVLMFAMVARTHRVRVRSDALIVFVSNENRVTWM-GKKEFFSKLLAGSRKDFSLFAWADKGQWETVQTS 367          
BLAST of mRNA_F-serratus_M_contig813.19550.1 vs. uniprot
Match: D7G5F3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5F3_ECTSI)

HSP 1 Score: 152 bits (383), Expect = 1.090e-38
Identity = 108/312 (34.62%), Postives = 153/312 (49.04%), Query Frame = 1
Query:  325 LRWVNLWWEPDFAR-----------EVTEGRCLDPSE-------------ASDLGPLVFLGNLLLVGSMLTGVFALHVVIISAVEAFWLTRSRARTFIASARRRGMPMEEVRIQMLTGRRPSP-------------SGEVLLPTW------GSFGDTSDGEEKSEDEQEKRALAMVTVATAQDLSPLTVCRDKSQSMWLHYPHLELLVLFYAFEGTVSSLASVIKAASNCDEFIYPAILILLLYPLLMFVTVWRTIVVRVHPDTLLVFKRFTNDPGGANGIRGFVSRFKSGWDRGSSIFSWADKGQWETITT 1131
            +RWVNLW    F+            E T G   D  E              SD+G  +F+GNL L    L  +F+LH+++ SA+EA+WL + RAR  +  A R  +   E    +L G RP               SG +  P         S+  T  G+  +E   +KR        ++  +  ++ CR+ SQS WLHYPHLEL+ L +AFEG V+S  S ++  S+   F Y A+  L+ YP+LM   V RT  VRV  D L+VF    +D G + G     S+  +G  + SS+F+WADKGQWET+ T
Sbjct:    6 IRWVNLWPSQSFSEGVASRVLSNEPESTAGEDGDSEEDGDATQRGISWTVISDVGSFLFMGNLALFAGFLLTIFSLHILVASAIEAYWLAKQRARNEVPRALRGDVSTSEFPTALL-GTRPQQKNLDDGWSAGRQTSGTIQSPQLMEHQAVSSWDSTGGGDSTNE---QKRGRTNTRAGSS--IGQVSQCRELSQSAWLHYPHLELVFLLFAFEGAVTSQVSALRTTSSSTVF-YAAVATLVFYPVLMVAMVVRTHRVRVRSDALIVFTSNESDEG-STGTSSIYSKTIAGLRKDSSLFAWADKGQWETVQT 309          
BLAST of mRNA_F-serratus_M_contig813.19550.1 vs. uniprot
Match: D8LN89_ECTSI (Liver stage antigen 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN89_ECTSI)

HSP 1 Score: 154 bits (390), Expect = 1.580e-37
Identity = 113/350 (32.29%), Postives = 175/350 (50.00%), Query Frame = 1
Query:  196 ATIRKPAAALALLLTKQLQFLCMLSLVDYISTANYVFTDFVVGLRWVNLWWEPDFAREVT----------EGRC--------------------LDPSEASDLGPLVFLGNLLLVGSMLTGVFALHVVIISAVEAFWLTRSRARTFIASARRRGMPMEEVRIQMLTGRRP-SPSGEVL--LPTWGSFGDTSDGEEKSEDEQEKRALAMVTVATAQDLSPLTVCRDKSQSMWLHYPHLELLVLFYAFEGTVSSLASVIKAASNCDEFIYPAILILLLYPLLMFVTVWRTIVVRVHPDTLLVFKRFTNDPGGANG-----IRGFVSRFKSGWDRGSSIFSWADKGQWETITT 1131
            ++IR+P+  +A++   QLQFL  LSLV    T +    DF   LRW+NLW    FAR  T          EG                      ++  E+ DL   VF+GNL+L   +L  +F +H+ + S +EA+WL +  A   +A A+RRG+P+ E+  ++     P  P+ E    L T  + GD  +GE    D +E     M        LS +  CR++SQS+WLH+PH+EL+ L +AFEG V++  S I+  +     I  A+L LL +P+LM   V  T   ++     +VF    +D   A       +R F S+ + G     S+F+W++KG+WE++ T
Sbjct: 2179 SSIRRPSTTMAIVALGQLQFLATLSLVGNTGTEDSKLYDFANNLRWINLWPPASFARSFTPASMYGELDQEGEDAXXXXXXXXXXXXXXXXXEGVENEESGDLSSGVFVGNLVLFLIILFIIFLIHITVASGIEAYWLAKRGAEKHVARAQRRGVPVRELSARLSNPWAPFDPNSESQRSLRTAKTSGD-DEGEADDTDAEE----GMPETVGRSKLSKIAECRERSQSVWLHFPHVELMYLLFAFEGAVAAQVSAIRENATLLVLIL-AVLALLFFPVLMTFNVMCTFFGKIRSKKHIVFIPNADDAVEAESDLYTSVRSFGSKVRRGLKESYSMFAWSNKGEWESVDT 2522          
BLAST of mRNA_F-serratus_M_contig813.19550.1 vs. uniprot
Match: A0A6H5JTJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTJ3_9PHAE)

HSP 1 Score: 152 bits (385), Expect = 6.610e-37
Identity = 113/348 (32.47%), Postives = 161/348 (46.26%), Query Frame = 1
Query:  196 ATIRKPAAALALLLTKQLQFLCMLSLVDYISTANYVFTDFVVGLRWVNLWWEPDFAR-----------EVTEGRCLDPSE-------------ASDLGPLVFLGNLLLVGSMLTGVFALHVVIISAVEAFWLTRSRARTFIASARRRGMPMEEVRIQMLTGRRPSPSGEVL----LPTWGSFGDTSDGEEKSEDEQEKRALAMVTVATAQDLSPLTVCRDKSQSMWLHYPHLELLVLFYAFEGTVSSLASVIKAASNCDEFIYPAILILL--------LYPLLMFVTVWRTIVVRVHPDTLLVFKRFTNDPGGANGIRGFVSRFKSGWDRGSSIFSWADKGQWETITT 1131
            +T R P++ +AL+LT Q+QFL  LS VD         +     LRWVNLW    F+            E T G   D  E              SD+G  +F+GNL L       +F++H+++ SAVEA+WL + RAR  I  A    +          +G R   S +++    LP+W S G          D    +  A         +  ++ CR+ SQS WLHYPHLEL+ LF+AFEG V+S  S +++ S+   F Y A+  L            +L F+       VRV  D L+VF     D G + G     S+  +G  + SS+F+WADKG W T+ T
Sbjct:   95 STFRNPSSTMALVLTSQIQFLATLSFVDDTGVEGSALSGLTKNLRWVNLWPSQSFSEGVASWVLCNEPEPTSGEDDDSEEDGDSTQRGISWTVISDVGSFLFMGNLALFAGFFVIIFSVHILLASAVEAYWLAKQRARNEIPRALGGDLSTSGSSTAW-SGTRAIQSPQLMEHQALPSWDSTG--------RNDSTNVQEAARTNTRAGSSIGQVSECRELSQSAWLHYPHLELVFLFFAFEGAVTSQVSALRSTSSSTVF-YAAVATLTGCNLSRIATMSILGFILFDVRGRVRVRSDALIVFTSNKTDEG-STGKSTLYSKMVTGLKKDSSLFAWADKGHWNTVQT 431          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig813.19550.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
A0A6H5JD90_9PHAE2.540e-7647.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWS4_ECTSI1.480e-7545.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LLG6_ECTSI5.480e-7546.18Mucin-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JR60_9PHAE1.590e-6642.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J9C2_9PHAE1.010e-4935.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1L9_ECTSI1.110e-4735.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JZX1_9PHAE6.600e-4234.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5F3_ECTSI1.090e-3834.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LN89_ECTSI1.580e-3732.29Liver stage antigen 3 n=1 Tax=Ectocarpus siliculos... [more]
A0A6H5JTJ3_9PHAE6.610e-3732.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig813contigF-serratus_M_contig813:321370..323797 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons5
Model size1135
Cds size1134
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig813.19550.1prot_F-serratus_M_contig813.19550.1Fucus serratus malepolypeptideF-serratus_M_contig813 321371..323797 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932427.2889404-CDS-F-serratus_M_contig813:321370..3215861622932427.2889404-CDS-F-serratus_M_contig813:321370..321586Fucus serratus maleCDSF-serratus_M_contig813 321371..321586 -
1690964303.90565-CDS-F-serratus_M_contig813:321370..3215861690964303.90565-CDS-F-serratus_M_contig813:321370..321586Fucus serratus maleCDSF-serratus_M_contig813 321371..321586 -
1622932427.307125-CDS-F-serratus_M_contig813:321900..3222931622932427.307125-CDS-F-serratus_M_contig813:321900..322293Fucus serratus maleCDSF-serratus_M_contig813 321901..322293 -
1690964303.9159195-CDS-F-serratus_M_contig813:321900..3222931690964303.9159195-CDS-F-serratus_M_contig813:321900..322293Fucus serratus maleCDSF-serratus_M_contig813 321901..322293 -
1622932427.3256757-CDS-F-serratus_M_contig813:322543..3227391622932427.3256757-CDS-F-serratus_M_contig813:322543..322739Fucus serratus maleCDSF-serratus_M_contig813 322544..322739 -
1690964303.9397724-CDS-F-serratus_M_contig813:322543..3227391690964303.9397724-CDS-F-serratus_M_contig813:322543..322739Fucus serratus maleCDSF-serratus_M_contig813 322544..322739 -
1622932427.345892-CDS-F-serratus_M_contig813:323052..3232431622932427.345892-CDS-F-serratus_M_contig813:323052..323243Fucus serratus maleCDSF-serratus_M_contig813 323053..323243 -
1690964303.950864-CDS-F-serratus_M_contig813:323052..3232431690964303.950864-CDS-F-serratus_M_contig813:323052..323243Fucus serratus maleCDSF-serratus_M_contig813 323053..323243 -
1622932427.3808572-CDS-F-serratus_M_contig813:323659..3237971622932427.3808572-CDS-F-serratus_M_contig813:323659..323797Fucus serratus maleCDSF-serratus_M_contig813 323660..323797 -
1690964303.964218-CDS-F-serratus_M_contig813:323659..3237971690964303.964218-CDS-F-serratus_M_contig813:323659..323797Fucus serratus maleCDSF-serratus_M_contig813 323660..323797 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig813.19550.1

>prot_F-serratus_M_contig813.19550.1 ID=prot_F-serratus_M_contig813.19550.1|Name=mRNA_F-serratus_M_contig813.19550.1|organism=Fucus serratus male|type=polypeptide|length=378bp
SGLVPALIVVALVVFNIDNLTKSSSKRNRSTESPTTSSRNVTGSVEASIQ
APVSTTDNDQHTTRHATIRKPAAALALLLTKQLQFLCMLSLVDYISTANY
VFTDFVVGLRWVNLWWEPDFAREVTEGRCLDPSEASDLGPLVFLGNLLLV
GSMLTGVFALHVVIISAVEAFWLTRSRARTFIASARRRGMPMEEVRIQML
TGRRPSPSGEVLLPTWGSFGDTSDGEEKSEDEQEKRALAMVTVATAQDLS
PLTVCRDKSQSMWLHYPHLELLVLFYAFEGTVSSLASVIKAASNCDEFIY
PAILILLLYPLLMFVTVWRTIVVRVHPDTLLVFKRFTNDPGGANGIRGFV
SRFKSGWDRGSSIFSWADKGQWETITTS
back to top

mRNA from alignment at F-serratus_M_contig813:321370..323797-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig813.19550.1 ID=mRNA_F-serratus_M_contig813.19550.1|Name=mRNA_F-serratus_M_contig813.19550.1|organism=Fucus serratus male|type=mRNA|length=2428bp|location=Sequence derived from alignment at F-serratus_M_contig813:321370..323797- (Fucus serratus male)
AGCGGATTGGTGCCTGCCCTGATTGTCGTAGCCCTGGTGGTTTTCAACAT CGATAACCTGACAAAGTCATCCAGTAAGCGAAATCGGAGCACCGAATCGC CCACGACCTCATCCCGCAACGTCACGGGGTCTGTCGAGGTGGGCATGCTA TTGACTATTGGAGGAAAGTCCAACACCAACGAGTCACGGACGCTCAACAT TACGTTTCCTTTCTGTCTTACGTACGCATACCACGTTCGAGTACTCTTCT GTGCTTGGTACAAGATGAAAGATGTAGACCCATCGCAACAGGCCAGCAAA CGAACCAATCGTATCAAAAGTCCTAGATCAAGACGTGATACCCAGGTTTC GTGGAGCAGCAGCGATTCCTCAACTCTCGATGACATTATTTTGACTCTGT TGCTTCAGTGCGAATGTCGTAATGCATGGAAATGAGACGTGGGCGCACCG CACAAACGTTCTCAAACAAGCGCTGAAGAAAAGTGTTCTTGTTGGCCTTG TTTCTTTCTTTTCGTGTCGCACTGCCCCCGCTATCATCGTTCCTTTCTCG AAAGGCTTCCATACAGGCCCCTGTCTCCACCACCGACAACGATCAGCATA CAACTCGACATGCGACCATCCGCAAGCCGGCCGCAGCGCTGGCTCTTTTG CTTACGAAGCAACTCCAGTTCCTCTGCATGTTGTCGCTTGTAGACTATAT CTCGACAGCGAATTATGTGTTCACCGACTTCGTCGTCGGTCTCAGGTACG ACAGAGTCATGACCCAATTGTGTGTGAGTCATTGCATGTTTTCTAGGGAC TGTACCTGACTTATTCCTCTGCCCTGGTCGGCTATTCAGGGGCTACCGTT ACTTCAAACCATTATTGGGCTACATGTCATTTACGGGTCGGTCACAAAAC GCTAGATCTCTCCGCGTACGTTCACTTTCCGTTTTCCAACTCACCCAATT GTTGACATGAAATATTTTCGTCTACAGTACCGATGCCCCCCCCCCCCCCC TATCTTCTTCACTTTGTCCCTGTTCCTTGCACTTCTCTCGTGATATATTC ATTACAAGATGGGTAAACCTCTGGTGGGAACCTGACTTTGCCCGGGAGGT TACGGAGGGTCGATGCTTGGATCCAAGCGAGGCTTCCGACTTGGGCCCTC TGGTCTTTCTTGGGAACCTCTTGCTTGTCGGAAGCATGCTGACGGGCGTG TTCGCGTTACACGTGGTGATAATTTCCGCTGTGGAAGCGTTCTGGTTGAC GAGGGTGGGTCAACTACTTGTACTTCCTTTGCGCCCCCATTGTCATGCAC AATTCACATCCGATGCCCATGCGAGAACTTGTCAATCATTCGACGGGCCA CACAAGATTCAAGAGTAGGCTGTGTGGCTCGCGTACTCTACTGACACGCT GCAAGACTCGGACGGTACAGAACAGATCTTCTCCGCCTTAGGCTCGGCCG TTCGTCCCCAACGCTTTGCTCTTTGGCTAAAACTTTTTCTGCTCCCCAAT CCAGAGCCGTGCTAGAACTTTTATTGCGTCTGCTCGACGCCGTGGCATGC CCATGGAAGAAGTGAGAATCCAAATGCTGACGGGTCGCCGGCCATCGCCG TCCGGAGAAGTACTACTACCAACTTGGGGATCGTTTGGGGACACCTCTGA CGGAGAGGAGAAGAGCGAGGATGAACAAGAGAAAAGAGCCCTGGCGATGG TGACGGTAGCGACCGCCCAGGATTTGAGCCCGTTGACAGTGTGCCGGGAT AAGTCACAGTCGATGTGGCTGCACTATCCTCACCTTGAGCTTCTTGTCCT TTTCTATGCCTTCGAGGGGACAGTCTCGTCGCTGGCGTCCGTTATCAAAG CTGCCTCGAACTGTGATGAGTTTATCTACCCGGCGATACTTATCTTGGTG AGTAGTGCACGGGAGCTCGAAAACTCTGGGCTTATGTAGTCACGACGTTT CGTCAAACGATCACCGTGATGTTGGTTTTATGCTTTGGTAAGATCTGACG TCACTAGAATTCACACTTGAAGCGTGGCCTCTGACTTGGCCGCTATTTCT CCCGTGACCTATCTTGTGGAAATAATTCCTCCGTAACGTACAAAGATGCA CGCCGCCTACGCATGAATGCATATGACGCTCAAGACCAATCACTTCTTGA TCGAACCCCCGGATCAAACATATTTTATTTGTGTCTCTGCACTCTTCCTG GCGCCCAACAGCTCCTCTACCCCCTCCTCATGTTCGTGACGGTGTGGAGG ACGATCGTCGTGCGAGTGCATCCCGATACCTTGCTCGTCTTCAAGAGGTT TACCAACGATCCTGGTGGTGCCAATGGTATCCGAGGCTTCGTTTCGAGGT TCAAGAGCGGCTGGGATCGAGGCTCTAGCATATTCTCGTGGGCAGATAAG GGGCAGTGGGAGACTATCACGACGTCCG
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig813:321370..323797-

>mRNA_F-serratus_M_contig813.19550.1 ID=mRNA_F-serratus_M_contig813.19550.1|Name=mRNA_F-serratus_M_contig813.19550.1|organism=Fucus serratus male|type=CDS|length=2268bp|location=Sequence derived from alignment at F-serratus_M_contig813:321370..323797- (Fucus serratus male)
AGCGGATTGGTGCCTGCCCTGATTGTCGTAGCCCTGGTGGTTTTCAACAT
CGATAACCTGACAAAGTCATCCAGTAAGCGAAATCGGAGCACCGAATCGC
CCACGACCTCATCCCGCAACGTCACGGGGTCTGTCGAGAGCGGATTGGTG
CCTGCCCTGATTGTCGTAGCCCTGGTGGTTTTCAACATCGATAACCTGAC
AAAGTCATCCAGTAAGCGAAATCGGAGCACCGAATCGCCCACGACCTCAT
CCCGCAACGTCACGGGGTCTGTCGAGGCTTCCATACAGGCCCCTGTCTCC
ACCACCGACAACGATCAGCATACAACTCGACATGCGACCATCCGCAAGCC
GGCCGCAGCGCTGGCTCTTTTGCTTACGAAGCAACTCCAGTTCCTCTGCA
TGTTGTCGCTTGTAGACTATATCTCGACAGCGAATTATGTGTTCACCGAC
TTCGTCGTCGGTCTCAGGCTTCCATACAGGCCCCTGTCTCCACCACCGAC
AACGATCAGCATACAACTCGACATGCGACCATCCGCAAGCCGGCCGCAGC
GCTGGCTCTTTTGCTTACGAAGCAACTCCAGTTCCTCTGCATGTTGTCGC
TTGTAGACTATATCTCGACAGCGAATTATGTGTTCACCGACTTCGTCGTC
GGTCTCAGATGGGTAAACCTCTGGTGGGAACCTGACTTTGCCCGGGAGGT
TACGGAGGGTCGATGCTTGGATCCAAGCGAGGCTTCCGACTTGGGCCCTC
TGGTCTTTCTTGGGAACCTCTTGCTTGTCGGAAGCATGCTGACGGGCGTG
TTCGCGTTACACGTGGTGATAATTTCCGCTGTGGAAGCGTTCTGGTTGAC
GAGGATGGGTAAACCTCTGGTGGGAACCTGACTTTGCCCGGGAGGTTACG
GAGGGTCGATGCTTGGATCCAAGCGAGGCTTCCGACTTGGGCCCTCTGGT
CTTTCTTGGGAACCTCTTGCTTGTCGGAAGCATGCTGACGGGCGTGTTCG
CGTTACACGTGGTGATAATTTCCGCTGTGGAAGCGTTCTGGTTGACGAGG
AGCCGTGCTAGAACTTTTATTGCGTCTGCTCGACGCCGTGGCATGCCCAT
GGAAGAAGTGAGAATCCAAATGCTGACGGGTCGCCGGCCATCGCCGTCCG
GAGAAGTACTACTACCAACTTGGGGATCGTTTGGGGACACCTCTGACGGA
GAGGAGAAGAGCGAGGATGAACAAGAGAAAAGAGCCCTGGCGATGGTGAC
GGTAGCGACCGCCCAGGATTTGAGCCCGTTGACAGTGTGCCGGGATAAGT
CACAGTCGATGTGGCTGCACTATCCTCACCTTGAGCTTCTTGTCCTTTTC
TATGCCTTCGAGGGGACAGTCTCGTCGCTGGCGTCCGTTATCAAAGCTGC
CTCGAACTGTGATGAGTTTATCTACCCGGCGATACTTATCTTGAGCCGTG
CTAGAACTTTTATTGCGTCTGCTCGACGCCGTGGCATGCCCATGGAAGAA
GTGAGAATCCAAATGCTGACGGGTCGCCGGCCATCGCCGTCCGGAGAAGT
ACTACTACCAACTTGGGGATCGTTTGGGGACACCTCTGACGGAGAGGAGA
AGAGCGAGGATGAACAAGAGAAAAGAGCCCTGGCGATGGTGACGGTAGCG
ACCGCCCAGGATTTGAGCCCGTTGACAGTGTGCCGGGATAAGTCACAGTC
GATGTGGCTGCACTATCCTCACCTTGAGCTTCTTGTCCTTTTCTATGCCT
TCGAGGGGACAGTCTCGTCGCTGGCGTCCGTTATCAAAGCTGCCTCGAAC
TGTGATGAGTTTATCTACCCGGCGATACTTATCTTGCTCCTCTACCCCCT
CCTCATGTTCGTGACGGTGTGGAGGACGATCGTCGTGCGAGTGCATCCCG
ATACCTTGCTCGTCTTCAAGAGGTTTACCAACGATCCTGGTGGTGCCAAT
GGTATCCGAGGCTTCGTTTCGAGGTTCAAGAGCGGCTGGGATCGAGGCTC
TAGCATATTCTCGTGGGCAGATAAGGGGCAGTGGGAGACTATCACGACGT
CCCTCCTCTACCCCCTCCTCATGTTCGTGACGGTGTGGAGGACGATCGTC
GTGCGAGTGCATCCCGATACCTTGCTCGTCTTCAAGAGGTTTACCAACGA
TCCTGGTGGTGCCAATGGTATCCGAGGCTTCGTTTCGAGGTTCAAGAGCG
GCTGGGATCGAGGCTCTAGCATATTCTCGTGGGCAGATAAGGGGCAGTGG
GAGACTATCACGACGTCC
back to top