prot_F-serratus_M_contig813.19535.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig813.19535.1
Unique Nameprot_F-serratus_M_contig813.19535.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length339
Homology
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BLAST of mRNA_F-serratus_M_contig813.19535.1 vs. uniprot
Match: D7FT97_ECTSI (T5orf172 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT97_ECTSI)

HSP 1 Score: 327 bits (837), Expect = 3.620e-107
Identity = 190/362 (52.49%), Postives = 240/362 (66.30%), Query Frame = 0 
Query:   10 VDASWTKKELISECKRRGISGYSRLDKASIICCLSEGQGDIDSVTSSDGGGYAEGASGTPSKEP---TVRDLREECRKRGLRSYSKLRKNELLRLLQGQQDTFSSTRSSTDTKRQSHKEPTLAELRMECQKRGMKGFIHLKKEDLLRRMEDYSREQNDG-------THSRGGGI-------------RAQHSRSLGPLRSRAQERFDAGPTPCDTPGFIYVYFDP-------QGEQNEWKIGKTTLDPPERRMRQSAVTNSKKYQLKASWYVPWCGYVEKIVHLDLDDMRVFPGKEKVV-GIGVEDGGTEWFRGEYEVMEARIRLSLRMVTLRAADEADANRTE-RFCGIFRCELPPFRQRR 339
            VD +WTKKEL +ECKRRGI+GYSRL+KAS++  L  G     S T           + T SK P   TV +LREECR+RGL++ SKL+K+EL+RLL+  +   SS+ ++    +   +E TL ELR EC+KRGM G+ HLKK++L+RRM DY    N         + +RGG               + Q +R  GPLRSRAQERFDAGP+P DTPGF+Y+Y +          +  EWKIGKTTLDPPERRM+QSA  N K Y L+ASW+VPWCGYVEKIVHLDLDD++V PGKEK   G G EDGGTEWFR + +V+EAR++L++RMV  R ADEAD    +  FCG+FRC LP  R+RR
Sbjct:    4 VDETWTKKELQAECKRRGITGYSRLNKASLLRALQTGVVMTPSATGXXXXXXXXXXTNTQSKGPADLTVAELREECRRRGLQNVSKLKKDELIRLLKDNKKPSSSSGNTPGEAKP--REATLEELRAECRKRGMTGYSHLKKQELIRRMADYKSSDNGSKGVKASPSVARGGKATRIRFLGRGGKEKQQQRARMKGPLRSRAQERFDAGPSPQDTPGFLYIYCESGXXXXXXXDKTKEWKIGKTTLDPPERRMKQSAHNNRKAYTLRASWHVPWCGYVEKIVHLDLDDLKVVPGKEKSWDGGGREDGGTEWFRADIDVVEARVKLAIRMVAAREADEADFLGVQPAFCGMFRCGLPVRRRRR 363
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BLAST of mRNA_F-serratus_M_contig813.19535.1 vs. uniprot
Match: A0A6H5JBR9_9PHAE (T5orf172 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBR9_9PHAE)

HSP 1 Score: 217 bits (553), Expect = 2.250e-66
Identity = 111/173 (64.16%), Postives = 130/173 (75.14%), Query Frame = 0 
Query:  176 QHSRSLGPLRSRAQERFDAGPTPCDTPGFIYVYFDP-------QGEQNEWKIGKTTLDPPERRMRQSAVTNSKKYQLKASWYVPWCGYVEKIVHLDLDDMRVFPGKEKVV-GIGVEDGGTEWFRGEYEVMEARIRLSLRMVTLRAADEADANRTE-RFCGIFRCELPPFRQRR 339
            Q  R  GPLRSRAQERFDAGP+P DTPGF+Y+Y +          +  EWKIGKTTLDPPERRM+QSA  N K Y L+ASW+VPWCGYVEKIVHLDLDD++V PGKEK   G G EDGGTEWFR + EV+EAR++L++RMV  R ADEAD    +  FCG+FRC LP  R+RR
Sbjct:   42 QRVRMKGPLRSRAQERFDAGPSPQDTPGFLYIYCESGXXXXXXXDKTREWKIGKTTLDPPERRMKQSAHNNRKTYTLRASWHVPWCGYVEKIVHLDLDDLKVVPGKEKSWDGGGREDGGTEWFRADIEVVEARVKLAIRMVAAREADEADLLGVQPAFCGMFRCGLPIRRRRR 214
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BLAST of mRNA_F-serratus_M_contig813.19535.1 vs. uniprot
Match: A0A6H5J7I9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7I9_9PHAE)

HSP 1 Score: 55.1 bits (131), Expect = 4.290e-6
Identity = 25/37 (67.57%), Postives = 31/37 (83.78%), Query Frame = 0 
Query:   10 VDASWTKKELISECKRRGISGYSRLDKASIICCLSEG 46
            VD +WTKKEL +ECKRRGI+GYSRL+KAS++  L  G
Sbjct:    4 VDKTWTKKELQAECKRRGIAGYSRLNKASLLRALQTG 40
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig813.19535.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FT97_ECTSI3.620e-10752.49T5orf172 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JBR9_9PHAE2.250e-6664.16T5orf172 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5J7I9_9PHAE4.290e-667.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018306Bacteriophage T5, Orf172 DNA-bindingPFAMPF10544T5orf172coord: 203..302
e-value: 5.3E-11
score: 43.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig813contigF-serratus_M_contig813:93607..109935 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig813.19535.1mRNA_F-serratus_M_contig813.19535.1Fucus serratus malemRNAF-serratus_M_contig813 93607..109935 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig813.19535.1 ID=prot_F-serratus_M_contig813.19535.1|Name=mRNA_F-serratus_M_contig813.19535.1|organism=Fucus serratus male|type=polypeptide|length=339bp
MGQSTAVVKVDASWTKKELISECKRRGISGYSRLDKASIICCLSEGQGDI
DSVTSSDGGGYAEGASGTPSKEPTVRDLREECRKRGLRSYSKLRKNELLR
LLQGQQDTFSSTRSSTDTKRQSHKEPTLAELRMECQKRGMKGFIHLKKED
LLRRMEDYSREQNDGTHSRGGGIRAQHSRSLGPLRSRAQERFDAGPTPCD
TPGFIYVYFDPQGEQNEWKIGKTTLDPPERRMRQSAVTNSKKYQLKASWY
VPWCGYVEKIVHLDLDDMRVFPGKEKVVGIGVEDGGTEWFRGEYEVMEAR
IRLSLRMVTLRAADEADANRTERFCGIFRCELPPFRQRR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018306Phage_T5_Orf172_DNA-bd