|
|
Homology
BLAST of mRNA_F-serratus_M_contig812.19523.1 vs. uniprot
Match: D7FYJ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYJ4_ECTSI) HSP 1 Score: 176 bits (446), Expect = 5.120e-49 Identity = 91/112 (81.25%), Postives = 102/112 (91.07%), Query Frame = 1
Query: 367 EDQQKINEFGRLNARLVEIRDDKAHVKDVLDKLDDATTELMSGEGDSVMLMLGDGFVVCEEEYATEFCERKQEERQSKSDDLAAEEKDILERQAVLKKALYARFGSSIQLEA 702
EDQQKINEFGRLN RL+EIRDDK+H+KD+LDKLDDATTELM+GEGDSVMLMLGD F+ CEEE+AT++CER+QE+RQSK DDL EEK IL RQ VLKK LYARFGSSIQLEA
Sbjct: 9 EDQQKINEFGRLNTRLLEIRDDKSHIKDILDKLDDATTELMTGEGDSVMLMLGDSFMECEEEFATDYCERQQEKRQSKLDDLVDEEKTILLRQGVLKKELYARFGSSIQLEA 120
BLAST of mRNA_F-serratus_M_contig812.19523.1 vs. uniprot
Match: A0A835Z9N6_9STRA (Prefoldin subunit 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9N6_9STRA) HSP 1 Score: 143 bits (360), Expect = 1.690e-36 Identity = 86/142 (60.56%), Postives = 99/142 (69.72%), Query Frame = 1
Query: 325 MIAREEEVDVEVRLEDQQKINEFGRLNARLVEIRDDKAHVKDVLDKLDDATTELMSGEGDSVMLMLGDGFVVCEEEYATEFCERKQ----------------EERQSKSDDLAAEEKDILERQAVLKKALYARFGSSIQLEA 702
M+ REEEVDVEVR EDQQ+INEFGRLN RL E+R D +K LD LDDATTELM+G+G V L LGD FVV EEE+ATE+CE+KQ E Q+K D L+ EE IL+RQA LKK LYARFG+SI LEA
Sbjct: 1 MLRREEEVDVEVRWEDQQQINEFGRLNTRLNELRGDTKALKGELDNLDDATTELMTGDGGKVNLQLGDAFVVVEEEFATEYCEKKQSIAPAESXXXXXXXXXEGVQAKLDALSREEDSILKRQAELKKILYARFGASINLEA 142
BLAST of mRNA_F-serratus_M_contig812.19523.1 vs. uniprot
Match: B5YND4_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YND4_THAPS) HSP 1 Score: 137 bits (345), Expect = 1.650e-34 Identity = 74/125 (59.20%), Postives = 93/125 (74.40%), Query Frame = 1
Query: 325 MIAREEEVDVEVRLEDQQKINEFGRLNARLVEIRDDKAHVKDVLDKLDDATTELMSGEGDSVMLMLGDGFVVCEEEYATEFCERKQEERQSKSDDLAAEEKDILERQAVLKKALYARFGSSIQLE 699
++A+EEE D EVR EDQ KINEFG+LNARL E+R + A +K +L+K+DDA+TELM G GD VML LG+ E+ ATEFCE + E+ Q+ DDL EE DI+E+QA LKK LY RFG+SI LE
Sbjct: 8 ILAKEEENDAEVRREDQDKINEFGQLNARLYEVRSEIARLKKLLEKIDDASTELMMGNGDKVMLRLGEAMFEATEDEATEFCEAEMEKHQAVLDDLDKEEADIVEKQAALKKVLYGRFGNSINLE 132
BLAST of mRNA_F-serratus_M_contig812.19523.1 vs. uniprot
Match: A0A7S0B128_9STRA (Prefoldin subunit 4 n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0B128_9STRA) HSP 1 Score: 131 bits (329), Expect = 2.830e-32 Identity = 73/126 (57.94%), Postives = 91/126 (72.22%), Query Frame = 1
Query: 322 RMIAREEEVDVEVRLEDQQKINEFGRLNARLVEIRDDKAHVKDVLDKLDDATTELMSGEGDSVMLMLGDGFVVCEEEYATEFCERKQEERQSKSDDLAAEEKDILERQAVLKKALYARFGSSIQLE 699
+M+ REEE + EVR EDQ+ IN+FGRLNARL E+R ++ +K L+++DDA+TELM G GD VMLMLGD F EE ATEFCE + E+ Q+ D+L EE +ILE Q LKK LY RFG SI LE
Sbjct: 8 QMLEREEESENEVRREDQENINKFGRLNARLYEVRGERDAIKKKLERIDDASTELMMGSGDKVMLMLGDAFFESSEEDATEFCEAEVEKFQAVVDNLEEEESEILEEQEKLKKILYTRFGKSINLE 133
BLAST of mRNA_F-serratus_M_contig812.19523.1 vs. uniprot
Match: A0A7S2V806_9STRA (Prefoldin subunit 4 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V806_9STRA) HSP 1 Score: 126 bits (317), Expect = 1.070e-30 Identity = 71/125 (56.80%), Postives = 94/125 (75.20%), Query Frame = 1
Query: 325 MIAREEEVDVEVRLEDQQKINEFGRLNARLVEIRDDKAHVKDVLDKLDDATTELMSGEGDSVMLMLGDGFVVCEEEYATEFCERKQEERQSKSDDLAAEEKDILERQAVLKKALYARFGSSIQLE 699
MI+++++ DV VR EDQQKINEFGRLN RL E++ + K+ LDKLDDA+TELM+ +G V L+LG+ F+ C E+YATE+ +++QE+ Q D L+ EE ILERQ LK+ LYARFGSSI LE
Sbjct: 3 MISKDQDDDVLVRWEDQQKINEFGRLNTRLHELQVELKLHKENLDKLDDASTELMTEDGSGVKLLLGEVFIECNEDYATEYLDKEQEKTQVLVDQLSEEEHTILERQKELKEVLYARFGSSINLE 127
BLAST of mRNA_F-serratus_M_contig812.19523.1 vs. uniprot
Match: A0A6H5KTT7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTT7_9PHAE) HSP 1 Score: 125 bits (313), Expect = 1.090e-30 Identity = 61/76 (80.26%), Postives = 71/76 (93.42%), Query Frame = 1
Query: 358 VRLEDQQKINEFGRLNARLVEIRDDKAHVKDVLDKLDDATTELMSGEGDSVMLMLGDGFVVCEEEYATEFCERKQE 585
V EDQQKINEFGRLN RL+EIR+DK+HVKD+LDKLDDATTELM+GEGDSVMLMLGD F+ CEEE+AT++CER+QE
Sbjct: 2 VSYEDQQKINEFGRLNTRLLEIREDKSHVKDILDKLDDATTELMTGEGDSVMLMLGDSFMECEEEFATDYCERQQE 77
BLAST of mRNA_F-serratus_M_contig812.19523.1 vs. uniprot
Match: A0A7S3YAJ8_HETAK (Prefoldin subunit 4 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YAJ8_HETAK) HSP 1 Score: 125 bits (315), Expect = 1.910e-30 Identity = 67/118 (56.78%), Postives = 84/118 (71.19%), Query Frame = 1
Query: 349 DVEVRLEDQQKINEFGRLNARLVEIRDDKAHVKDVLDKLDDATTELMSGEGDSVMLMLGDGFVVCEEEYATEFCERKQEERQSKSDDLAAEEKDILERQAVLKKALYARFGSSIQLEA 702
+ EVR EDQ +INEFG+LN RL EIR+D +KD D+LDDA TELM+G+GD V + +G+ F+ C EEYATE+CE++QE+ Q D EE ILERQ LK LY RFG +I LEA
Sbjct: 10 EAEVRREDQLQINEFGQLNNRLNEIREDCKALKDKFDRLDDANTELMTGDGDDVKIFMGESFIQCSEEYATEYCEKEQEKLQGMLDTFKEEETAILERQKELKVVLYGRFGDAINLEA 127
BLAST of mRNA_F-serratus_M_contig812.19523.1 vs. uniprot
Match: A0A6U1YJT7_TRICV (Prefoldin subunit 4 n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A6U1YJT7_TRICV) HSP 1 Score: 124 bits (312), Expect = 4.940e-30 Identity = 68/125 (54.40%), Postives = 86/125 (68.80%), Query Frame = 1
Query: 325 MIAREEEVDVEVRLEDQQKINEFGRLNARLVEIRDDKAHVKDVLDKLDDATTELMSGEGDSVMLMLGDGFVVCEEEYATEFCERKQEERQSKSDDLAAEEKDILERQAVLKKALYARFGSSIQLE 699
++ R++E D EVR DQ+ IN FGRLNARL E+R + +K L+++DDA+TELM G GDSV+L+LGD F C EE ATE CE + + Q D+L EE ILE Q LK+ LYARFG SI LE
Sbjct: 1 ILERDQESDAEVRRVDQENINTFGRLNARLYEVRASRDDLKKKLEQIDDASTELMMGSGDSVLLLLGDAFFECTEEEATEHCEAEADRLQGTVDELEEEESAILEEQGTLKRVLYARFGQSINLE 125
BLAST of mRNA_F-serratus_M_contig812.19523.1 vs. uniprot
Match: B7GDY3_PHATC (Prefoldin subunit 4 n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GDY3_PHATC) HSP 1 Score: 123 bits (308), Expect = 1.760e-29 Identity = 69/125 (55.20%), Postives = 91/125 (72.80%), Query Frame = 1
Query: 325 MIAREEEVDVEVRLEDQQKINEFGRLNARLVEIRDDKAHVKDVLDKLDDATTELMSGEGDSVMLMLGDGFVVCEEEYATEFCERKQEERQSKSDDLAAEEKDILERQAVLKKALYARFGSSIQLE 699
M+A EEE D EVR DQQ IN+F RLNARL E+R ++A+++ L++LDDA+TELM G GD+V +MLG+ F+ E+ ATEFCE + E+ QS+ + L EE I++ QA LKK LY RFG SI LE
Sbjct: 1 MLAAEEENDNEVRRIDQQNINKFARLNARLHEVRAERANLQKQLERLDDASTELMMGSGDTVWMMLGEAFLATSEDDATEFCEGQVEKMQSRVERLKGEETTIVDEQAELKKILYGRFGKSINLE 125
BLAST of mRNA_F-serratus_M_contig812.19523.1 vs. uniprot
Match: W7TPN2_9STRA (Prefoldin subunit 4 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPN2_9STRA) HSP 1 Score: 122 bits (307), Expect = 4.110e-29 Identity = 69/121 (57.02%), Postives = 87/121 (71.90%), Query Frame = 1
Query: 337 EEEVDVEVRLEDQQKINEFGRLNARLVEIRDDKAHVKDVLDKLDDATTELMSGEGDSVMLMLGDGFVVCEEEYATEFCERKQEERQSKSDDLAAEEKDILERQAVLKKALYARFGSSIQLE 699
+E DVEVR EDQ+ INEFGRLN + +E+ +D A++K+ L+KLDDA TELM G G V L LG+ F+ E+YATE CERKQE+ Q+K ++L E+ I RQ LKK LY RFGSSI LE
Sbjct: 23 DEAPDVEVRKEDQEMINEFGRLNNQYLELDEDLAYLKEQLEKLDDAVTELMVGVGGPVRLSLGEAFMDVSEDYATEHCERKQEQLQAKVEELGREKGKIATRQMELKKVLYGRFGSSINLE 143
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 178.3 |
| Seed ortholog evalue | 2.2e-42 |
| Seed eggNOG ortholog | 2880.D7FYJ4 |
| Preferred name | PFDN4 |
| KEGG ko | ko:K09550,ko:K20177 |
| KEGG Pathway | ko04138,map04138 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005829,GO:0006355,GO:0006357,GO:0006457,GO:0006508,GO:0006511,GO:0006515,GO:0006807,GO:0006950,GO:0007021,GO:0008092,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010033,GO:0010468,GO:0010498,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0015631,GO:0016043,GO:0016272,GO:0019219,GO:0019222,GO:0019538,GO:0019941,GO:0022607,GO:0030163,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032784,GO:0032786,GO:0032968,GO:0032991,GO:0033554,GO:0034243,GO:0034622,GO:0035966,GO:0035967,GO:0042221,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043632,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0045893,GO:0045935,GO:0045944,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051087,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051603,GO:0051716,GO:0051788,GO:0060255,GO:0065003,GO:0065007,GO:0070887,GO:0071218,GO:0071310,GO:0071629,GO:0071704,GO:0071840,GO:0080090,GO:1901564,GO:1901565,GO:1901575,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 |
| EggNOG free text desc. | unfolded protein binding |
| EggNOG OGs | COG1382@1,KOG1760@2759 |
| Ec32 ortholog description | Prefoldin beta-like |
| Ec32 ortholog | Ec-23_002980.1 |
| COG Functional cat. | O |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko03110,ko04131 |
| Exons | 5 |
| Model size | 1896 |
| Cds size | 381 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622932421.5925868-UTR-F-serratus_M_contig812:163554..163878 | 1622932421.5925868-UTR-F-serratus_M_contig812:163554..163878 | Fucus serratus male | UTR | F-serratus_M_contig812 163555..163878 + |
| 1690964301.1349826-UTR-F-serratus_M_contig812:163554..163878 | 1690964301.1349826-UTR-F-serratus_M_contig812:163554..163878 | Fucus serratus male | UTR | F-serratus_M_contig812 163555..163878 + |
| 1622932421.6860206-UTR-F-serratus_M_contig812:173915..175106 | 1622932421.6860206-UTR-F-serratus_M_contig812:173915..175106 | Fucus serratus male | UTR | F-serratus_M_contig812 173916..175106 + |
| 1690964301.206468-UTR-F-serratus_M_contig812:173915..175106 | 1690964301.206468-UTR-F-serratus_M_contig812:173915..175106 | Fucus serratus male | UTR | F-serratus_M_contig812 173916..175106 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622932421.6082582-CDS-F-serratus_M_contig812:163878..163911 | 1622932421.6082582-CDS-F-serratus_M_contig812:163878..163911 | Fucus serratus male | CDS | F-serratus_M_contig812 163879..163911 + |
| 1690964301.1488776-CDS-F-serratus_M_contig812:163878..163911 | 1690964301.1488776-CDS-F-serratus_M_contig812:163878..163911 | Fucus serratus male | CDS | F-serratus_M_contig812 163879..163911 + |
| 1622932421.6266258-CDS-F-serratus_M_contig812:172002..172092 | 1622932421.6266258-CDS-F-serratus_M_contig812:172002..172092 | Fucus serratus male | CDS | F-serratus_M_contig812 172003..172092 + |
| 1690964301.1600661-CDS-F-serratus_M_contig812:172002..172092 | 1690964301.1600661-CDS-F-serratus_M_contig812:172002..172092 | Fucus serratus male | CDS | F-serratus_M_contig812 172003..172092 + |
| 1622932421.639953-CDS-F-serratus_M_contig812:172956..173094 | 1622932421.639953-CDS-F-serratus_M_contig812:172956..173094 | Fucus serratus male | CDS | F-serratus_M_contig812 172957..173094 + |
| 1690964301.1762323-CDS-F-serratus_M_contig812:172956..173094 | 1690964301.1762323-CDS-F-serratus_M_contig812:172956..173094 | Fucus serratus male | CDS | F-serratus_M_contig812 172957..173094 + |
| 1622932421.65185-CDS-F-serratus_M_contig812:173482..173545 | 1622932421.65185-CDS-F-serratus_M_contig812:173482..173545 | Fucus serratus male | CDS | F-serratus_M_contig812 173483..173545 + |
| 1690964301.1857257-CDS-F-serratus_M_contig812:173482..173545 | 1690964301.1857257-CDS-F-serratus_M_contig812:173482..173545 | Fucus serratus male | CDS | F-serratus_M_contig812 173483..173545 + |
| 1622932421.6678503-CDS-F-serratus_M_contig812:173858..173915 | 1622932421.6678503-CDS-F-serratus_M_contig812:173858..173915 | Fucus serratus male | CDS | F-serratus_M_contig812 173859..173915 + |
| 1690964301.1958716-CDS-F-serratus_M_contig812:173858..173915 | 1690964301.1958716-CDS-F-serratus_M_contig812:173858..173915 | Fucus serratus male | CDS | F-serratus_M_contig812 173859..173915 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig812.19523.1 >prot_F-serratus_M_contig812.19523.1 ID=prot_F-serratus_M_contig812.19523.1|Name=mRNA_F-serratus_M_contig812.19523.1|organism=Fucus serratus male|type=polypeptide|length=127bp
MIAREEEVDVEVRLEDQQKINEFGRLNARLVEIRDDKAHVKDVLDKLDDA TTELMSGEGDSVMLMLGDGFVVCEEEYATEFCERKQEERQSKSDDLAAEE KDILERQAVLKKALYARFGSSIQLEA* back to topmRNA from alignment at F-serratus_M_contig812:163555..175106+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig812.19523.1 ID=mRNA_F-serratus_M_contig812.19523.1|Name=mRNA_F-serratus_M_contig812.19523.1|organism=Fucus serratus male|type=mRNA|length=11552bp|location=Sequence derived from alignment at F-serratus_M_contig812:163555..175106+ (Fucus serratus male) GATCTGAACGCGTATACACCCTGAGCATCCATCCATTCAGAGGGGAAAGT
CGTCGTGGGTAAGTTATTTCTCTTCATCGCCGAGCCGACTGTGTTGGCAG
GAGTCCACGAACTGTACAACCCTCTACATAATATAAACCAGACAAACAAT
CCTGGTTCAAGTACAAATTGTACGGCGTCTCCTCGTCTTCAGGAATCTTT
TGTTACTCGAAGAACCCCGACCGAAGCTCTGGTGTCCAGCCTACCGTATC
CAGCAACTTCCGGTACAGTTAGTTGTACAAGTCTTCCAAAGGAGAACCTG
GGGCTTGGTCTACCTCTCACAAGGATGATCGCTAGGGAAGAGGAGGTCGA
CGTCGAGGTGACTACAAGAGATGGTTATCGCGATTCTGTAATTCTTTTGT
CGGTCGAAGTTCCTGCGAGGACGCCTAGAGCTTTCGGATCTGCCTTATTA
CATGATGTAGTCTACTTCCAGGTGACATAGCGGTCTCTGTGGTACTTTCT
GGATTATACTTTAAGATTGGAACGGTGGTCCTCTTTGTCCTCCCATTCTC
TAACCTTTCTTTAGACTCTAACCTCTGCCCGTTAAAATCTCTGGGAATAT
CATGAACAAAGTTGTAGACTCGTTTTGCCCCTTCCAACTGACCGACCTTA
TTTTTCTGGTAATCGTCTATTTATATCCGGTACTTTCAACATGCCCACTT
CACACCTTAAGACTATTTCGTGTGGGAAAGAGAGGCGTATATTAACTGGT
CCATGGTGACCTGCTAAGGGGCGTTTTACACCTCAAACAGATGTTTCCAA
ATTCCATCAAGCAAACTTTCCAAAGTTTGGAAAGTTTGGAAAATCATTTA
ACACCTATTATTTCAGCTAGTGGTTGGAAAAGGCAACCCCGCTCAAAAAA
GTATGATACGCCTCGGGAATTTGAACACCTTTGCCTGTTGAAACCTCAGG
ACATATATTCATATATTCCCCTCTAACCGGGGGATGCTCAAAAGGTCTTG
CTGTTCTGATTTTCTTTAAACACCACAGAGATACAACTAGCCCCAAGTGG
CGCGAACTGGTATCCTCCGGACGTTCTGTTTGTAGATGCCATGACGTTTT
TTCTCTGGTGTTACGTTCGTTTTGCTTTGTTATGCTTTGTTTTGCTCTGT
TTTGCTTCGTTTTTGTCTCTATGCTTTCGTTGAAGCCGCAGCCCTTCGTT
CAATCGTCCTTCGAATGCAGGCGCCCCGGTAGCCACACGTGTTTCTATTT
TTTGGAGATGTCGCTTTTTTCGAGTATTTCTTCAACACTACACAAGAACG
CGGCTAGTAGATGTCAATAGATCGAAGAGCAAACCGCGATGATAGAGCTT
TTAAAAAAATCAGAACGCGCCTAGACTACACCTTCTGAGCTGTTGTAGGG
TCTACAGCGGTACCGTAGTACAACAAGATTATCAATTTCAAATAAATAAA
TAAACTTTGTGCCTTGGTACAGGATAGTCAGCTATGTATGCAAAAACAAA
TCTCCCAACGTGCTGCAGGTGATCCCGGCGCGCTACAGATATCTCCTGTG
GCACTCATTCGCGTAGCTGTATCCCTGCCGCGACTTTCAACATGCCCACT
TGATACCAATAGTGGGTGTGGGAAAGAGAGGCACATCATAATTGGTCCAT
GGTGACCTGCCAAGGCAGCACTCGTTCGGAACTACCTTGAAGCTCTGTGC
CGGCGGACCAAATATTCACAGGCACGAATGCGGACAGGGAAAGTATTTAT
TTCCCCTGTACAACTGACCACGAGCGGGATTACATACTCAACAAAGAAAG
AAGCCCGCCCATGTTGCCGCTGGCGATAAGGAAGCTTCATCCTGCACAGA
TTGAACTGGCCTTGGTTTCCTTTGATGCAAATCCGGAGAGGACTGTGTAG
CGGGGTTGCAACAGCCGTGGCGTGTTATTCCAAACTTTCCAAACTTTCCA
ACTTTCCAAGTTTGGAAATGGACGAGCACCGACCTCGAGGTGCTCCTCCA
ATTCCAAAGTTTGGAACGTTGAAGTTTGGAAAGTTTGGAAAATATTCCAA
ACTTTCCAAACTTTGTTTGAGGTGTAAAATGCGCCTAAGGAGCATTCGTT
CGGAACTACCTTGAGGTTTACTGGCCCTGTGCCGGCGGAATATTGGTCCA
TGGTGACCTGCTAAGGGAGCATTCGTTCGGAGCTACCTTGAGGTTTACTG
GCCCTGTGTTGGCGGAATATCGGCAGTTGTTGTTGTTGTTGATTCACACA
TTGAGCGTATTGTCCTTGCAACTGAAGAAACTATGGTGACACAATAAGTC
AGCCATAGACCTATCAAATGCTAAGGTGGAGTCTTAACCTACAACAGGAT
ACAAAAGAATATGTTCATAGAATCTGTCGATGGACAGATTCTACAGAACA
GATCCTATTTTGGGTCTAAACCACCATATTAGGAAATTCGGTGTAAGCTA
GACTGTCACGCCCCCGAGTGATTCGCGCCTCCGAGTGATTTTGAAAACAA
AGCGAGGCAACCGGGAGGCAGCACTTTTTACAAGTTGAGCAAGCCACGTC
AAACACGAGCTATATGAGGTCTATTTTTTTACGGCCGCCCGAGTGCAAGC
AGTCGGACGAACCCATCTCAAAATCAATCCACGATGGATTTAGAACTCGC
TGTAGAGTCCCCGTTGCTTGCGAAGCCGGGCAGGGGGCGGTATGGCAGAG
GAAGTGCTGTAGTAGCTTGGATCGGCAGCCTGAGTGATTTTGAAAACAAA
ACGAGGCAACCGGGAGGCAGCACTTTTTACAAGTTGAGCAGGCCACATGT
CAAACACGAGCTATATGAGTTCTAATTTTTTACGGCCGCCCGAGTGCAAG
CAGTCGGACGAACCCATCTCAAAATCCATCCACGATGGATTTAGAACTCG
CTGTAGAGTCCCCGTTGCTTGCGAAGCCGGGTAGGGGGAGGTATTATGGC
AGAGGAAGAAGTGCTGTAGCTTGGATCGGCAGCCTCCGAGCGATTTTGAA
AACAAAACGAGGCAACCGGGAGGCAGCACTTTTTACAAGTTGAGCAGGCC
ACATGTCAAACACGAGCTATATGAGGTCTATTTTTTTACGGCCGCCCGAG
TGCCAGGTCGCCGCCTTTCTCCGAAGACATGATCGTTGGGGGCAGGCAGG
CTGTGCGCCAGGTCTTTTTTTTCACTTAGTTGTGCCGCAGCTATTCTGTT
GTTACTGATGTTTGAGGGTCCGGCCGACAGAACTGCACGTCGACAGAAAA
AAATAAATGCCAAATCAATTAATTAAATCTGTGCATCTCGACAGATTCTG
TCGTGCCCAGAACTTGCCGATTTGTAGTTTTTAGTAGTGTTGAGCTCATT
TGGCCAATCACAGATCGACAGATTCTGACTCCAGATTCAAATTTTGAAGG
TTAAGACAGGGCCTAATCCCGCTTGTGGTCACAAAGAGGTACAGAGGTCA
ACGGGCCACATCATGGCGACAACCCGCTACTCAGACCATCAGGGATCCAA
ATCGCGACAAAATGTTATGCGGCTCTATAAGCAATGGCACCGACCAATAT
CAAAACGGTTCATCAAACATCCTTACTCCATATCGAGAGCAACCTCGATC
GACTCGGATTGTTGTCGCCTACCCACGACCAGCGTTCTCAGCAAAAAACC
GGAATAATTACGCTCCAGTGAACGCCATCGGTACGCAATTGCGGCGTGAC
CCGATAAACTTGGGACTGACCAGATGGCGTATGATGTTTTAATATAAATA
TATGTGTGACCATACACGGAGTCGGGAGGAATCCCGTAAGTAGCACCAGA
TTCGACCTGAGTATGGATGTAGATGAACAGGCGGACGCGGGACGGGACTG
TCGAAACCGTCTCGCGAGGCCAAATTCTCAGGCACGTGCGCGGACAGGGG
AATAGTCTATTCATTTTCCCTGTTCAGCTGACCACGAGCAGGATTGGCAA
CCTAAACCCGGTTGATCGTTACTCTCGCTATATGTGTGATCATACATACA
CCACAGGTATTATTGCGCGTGTATCACGAACTATCAATACTATTTGCACC
AAAAATTGCACTGCGACTATTATTCTATTAATAGGCCCCTCTAATATACT
TATACAGTGGTGTTTGACACCCATCCTATTCCAAACCCGATGTAACAAAA
TTAGGCTGTATCCAGCCTTATCGTGGCTTTTGTCTCTGTTTTGGTATGTA
TGTATGCATGTATGTGTGTATGTATGGTGACACATATAGCAAGAGTATGG
ATCAACCGGGTAAAGTTGCCAATCCTGCTCGTGGTCAGCTGAACAGGGAA
AAATAACATTTCCCGGTCCCTGTTCGCGCCTGAGAATTAGGTCTCGCGAG
AAGGATTCGGTCGTGTCCCGTCCCGCGTCACCCTGCTCATTCTCCATGGT
CAGATTGAATCTGGCGCTTACTCACGGGATTCCTCCCGATTTCCGAGGCG
GCGTCCATTTATTTCCTTAGACCGCCATACGCCGATCGGGTCAGTCCCGA
GTTTATCCGTTCACGCAATTGCGTACCGATGACGTTCACTAGGCTACTAC
GATCGAGGACCCCGATTAAATACCATGTAGAGTTTTTTTTTTTGCCTTTG
CAGCTTATGTTCCCACCTAAATGTTTCGACGATTTCCCGCCTGTTTGGAG
GATGCCCAGAATGATGAAGGTTTAGATGCGTTAGTTAGATAGTTCAGATT
TTTCTCCCCACGGTGCAGTCGGGAGTTGAGAGCGTGGTCGAGATTGCTGT
TTAAAAACTGTGTGGTGATAGTCTATAATACGTCTCTCGGCAAACCTCCA
AACACTGCGATACGATGGACGCACCATATGGCATACCAGTACAACAATAT
GATACCACGCTGATCGTTCTCTTTGTCCCTTTTTTTTAACGAAGTCGGTC
GGTCGCCTCCAAAACTCACGTTTCGATCTTTCTTTTCCCCCCAGATATTG
CTTAAAAGCCAAATTTGAACGCGTGTAGACCAGTGTAGACACTCCACGTT
GTTGTTGTTGTTGTTGTTGTTGTTGTTGACTTCACACATTTAGTGTTTTG
TCCTTGCGACTGAAGAAACTACGGTGACACAAGGACAATGTTTTTGTTTT
TGTCTGGTGTCCCTGCATGGCGTTTGATTTAAGTGTACAGCGCAACGGTG
AGTTTCTCCCCGGCATTATACTGTTGACTCAATGATACAACCATCGGGGA
ACCCGTTTAAATACCACGAAGAATTTTTGTATTTGCAGCCTACCTGGTAT
GATCCTATCTAAACGTTTTGATATTTTCCCCCCTGAGGGCGGTGTTTAGA
TAAAAAAAGGAACATGGAACATGGAACATGGAACGTGGAACTTCGAATTA
CTTGCCATTCCTCGTTCCCTGTTCTAAACGCTGTGTCCCAAAAAACCCAA
CTAAAGCTGGAATGCTGAACTGTCGAACCTGGTTTTAGTTGAAAAATCTG
GTAGAGCCACGGTTTGAGAACATCGACACACCGACACAGAAGGTATAGGC
GCATGGAAATTTTTATTTTGCCTGAGGACCGCCGTTTTGGAAATTTCTGA
GCCTTTTGTCCTCGACCAGCCCGTTCCATGTGGGCTCTTCACTAATATTA
AGGAACTTGAGGCTTTAAATTGTTTATGCGGCGGGAACGAGAAAAATGGA
ACTGCGGCGGCGGAACCTCTTTCCAGCAAAGTTATTTCGGCGGACCCTCT
TTCCAGGAAAGTTATTTTTTGTCGTTGGCCAATCGTAGAGGGATTCCAAT
CGCAGAGGGATTCGAAGTTCCACGTTCCATGTTCCCTGCGCTTTTGTTTT
ATCGAAAAACCGCCCTGACTGGGGGATGCTCAGAAGGTCAAGATGGGTTC
AGATTTTTCTTGAAAAAAAGTCAGCCATAGATAGATAGACCTATGAAATG
CCTATCCCGCTAGTGGTCACAAAGAGGGTACGAAGGTCAACGGGTCACAT
CATAGTTACTGCCCGCTACTACAGTAGTATTATAAAACCAATGCAGGAAT
CCAAATCGCGACAAAATTTCTTACCAGGTCCAAATCAACCGAGAACATCG
GAAACCCATCGGCGCCAAGACGATTTCTTTGGATACGAGCTACAGCTTCT
ACTGTCTGGAGTGCTGCTATAACAGTAACAGTAACAGTAACAGTAACAGT
ATTTCAAAATCTTAATTTTACATGCTGCCGGTCGACCCCGGTAGCTCAGT
AGGCACCTCGTAACCTTCTGACACGTTGGGACGTGAGTTCGATCCCGGCA
AACGGGATTTTTCTCACTAAAAACAAAAAAAACAAAAAAAAAATGCCCAA
CGGGTGGAGAACGATTAATTCGTTAGTACACAAAATTCGACTTCACGGTC
GACGAGGGAAAGGAATAGCTGAATCCTTCTCGCGACAAAAATCAAAGCAC
GCACCGCAGAAGGAAGGTGGATGAAAAAGCCTTCCTCCTGTGTGACCCCG
GCTGGTACGTCCAACGAACTTGATGTCCAGAATGGATGGGAAGAAAACAC
ACACACACACACAGAGAAGACTGTCTGATGTCTAATGTGCTGCCCATCCA
CCAAAGTCATCAAAAGTGCTTGAAAAAGTTTTTCTACAATAATAGCGATC
GATCGGAGGGTTTTACACGAAGACGAGCTATGCGACACTCTATGATACAA
GCACTGGTACCGACCAATGTCCAAACGGTTCATCCATCCTCCTAACTCCA
TATCGAGAGCAACCTCGATCGACTCGGATTGTTGTCGCCTACCCACAGCC
AGCGTTCTCAGCAACACAAAGGCGGACAAATCACGCTCCTAGCAGTTTTG
ATCAACAAGCCCAAGTTTTTTTAAGTTCACACGTGGTGCAGAAATAATAA
AAATAAAAATACCGATGTCCTTGGCGGTGAAGGCCTTGAGTATGGATGCT
CAGAAGGTTTAGATGCGTTCAGAATTTTCTTCAGAGGCGAATTATTGTGT
GTGTGTGTGTGTATTTATGAAATTGCACATAACCACGCAATCCGGCCCTG
TCATCCTAGTCATTCTATGCCACTCGCATTGATCCTCCCGAGGGGGGATC
AATGATACTGTGTGTGTGTGTGTTTTCTTCCCATTTATTCTGGACATCAA
GTTCGTTGGACGTACCAGCTGGGGTCACACAGGATTTCCCATCCACCTTC
CTTCTGCGGTGCGTGCCTTCATTTTTCTCGCGAGAAGGATTCAGCCATTA
TTCCTTTTCCTCGTCGACCGTGAAGTCGGATTTTGTGTACTAACGATTTA
ATCGTTCTCCACTCGTTGGGCATTTTATTTATTTATTTATTTATTTATTT
ATATTTTTAGTGAGAAAAATGAAAAATGCCGTTTGCCGGAATCAAACTCA
CGCCCCAACGTGTCAGAAGGTTACGAGGTTACCTTTGAGCTACCGGGGCG
ACCGGCTGTTATTATACACTTTGTTGAGCTGGGGCCGCATTAATGTTTGT
GGACGGCGGCCGTTCCATTCGAAGCGTGTATACTGTACCTGTTACAGTTT
TCCCAGTTTCCAGTCCACTACTGTCTTGTAATCTACTCGTAGTTTTTTAT
AAGAAAAAACAGAACGTACCTAGACCTTCTGAGCATCCCCCAGTCAGGGG
GAAAAAATGTCAAAACGTTCAGGTCGTCGGATCGAAGGCTGCAAATACAA
AACCTCTTCATGGCATTTAGATGGGTTCCCCTATGATAGTGGTAACATTG
GGTCAACAGGTATAATATCGGGGAGAAGCCCACCGTTAAACTGTACACTT
ACATTAATCGTCATGCAGGGACACCCACCATAAAAACATCGAAGACAAAA
CAGTACATCATCAAACGATAAAGACGAATCCAATACTGTATATGGTACCA
TACAACATTGAAACAAGAACAGAGGACCGTGGTGATGTAAGTTATCTTCA
TAATCCAGAAACACGACATCGTTATTCGCCTGGAAGTAGACGAAGAGCAG
TGGGAGATCACGCAAGGAAGTAAGAGGCAAGCGGAAAGAACTGGGTTCCT
CGCTCAATACTTTGTCAGGGCTACGACACACCGATGCTCCTCATACAGGA
CTTCGCTATGGTCCCGCGGTGACCAGACACACAGGAGGAAGAAGCATCTG
CCTGTCAAAGTTACCAAGTAGGCCTCCATAACCACCAAGCGTAATCTCCC
ATTGAAGATGAGATCCATTTCCAGTCTTCAACGTCACTCCGTCTTTAGTT
TTGTTTTTTGAATAAGAAATTGGCCATTCCACCGCCGTGTTCCACCCCAT
CAAAGACAGCCCAGCCCTATGATACTCCTCACCGATGTAACCGTGTAAGG
TATAGTTGCCAAATCTGACGCCACCATTTATCCCCCCAAGCCCTTCATGA
CAGCCGCCCCCCTTTCCTCCTCTCCTTGGTGATCCTCGCCTTTCGGATCG
TACATAATCACTATGATAACGTATTATTAATAAAAACCAATAAGCAAGGT
TCGTCTAGAAGACCAACAGAAGATCAACGAGTTCGGCCGCCTCAACGCGC
GATTAGTGGAGATCAGGGACGACAAAGCACACGTCAAGGTGAGAATTCGC
ACGAATCCCCCTCTCCGATCCCAGCCGTCCTCCGGCGCTCGCGTACGCTC
GAACGGGACCCCTACTCCACGCAAGAAAGCCCTTGGTTTGGTCCGGTCCG
GTCCGTGCGCTGTTGAGCTTCGTGGTACCAAGGAACTGGTGTGTTGTGTT
TGTGTTTGTGTGTGTGTGTGTGTGTTTTCTTCCCATATTGTTCTGAACAT
CAAGTTCGTTGGACGTACCAGCCGGGGTCACACAGGAGGAGGGTCACACA
AGATTTCTCATCCACCTTCCTTCTGCGGTGCGTGCCTTAACTTTTCTCGC
GAGAAGGATTCAGCCATTGCTTTCCCTCGTCGACCGTGAAGTCAAATGTT
GAAATTTTGTGTACTAACGAGTTAATCGTTCTCCGCTTGTTGGGCATTTA
TTTTTTATTTTTTGTTTCTTTTTTAGTGAGCAAAATCCCGTTTACCGGAA
TCGAACTCACGTCCCCAACGTGTCAGCAGGTTATGAGGTTACTTCTGAGC
TACCGGGCGACCGGTAGTGCATATATTTCAAATCCTCACGAGATAACATT
ATATCTTTCTATGTGCCCAACGGTCGCGATTTCGCCCTGGCGACGGTTCA
AACGCGCGTATTTTGGGGCGCTGGCGCCCCTCACGCCGACCGCTACGTCA
ACGTCTCTCCTGGCGACCGCCGCTGCTGCGCCGCGAGAGCCGACCGTGGC
ACGAAGGAGCAACGAAATCCGCAGCTCCCGAACCCTTGCCCACGAACGTA
CATGACACACCTCTCTCGCCAAGAAACCTTCCGACGTGCGACCCTCCCCC
GATAACGACCACTGCGCCTTTTTACAAATTTACTTGTGTACTTGTACTTA
AGGATGTCTTGGACAAGCTCGACGATGCTACCACGGAGCTCATGAGTGGA
GAAGGGGACTCGGTGATGCTGATGCTCGGTGACGGTTTTGTGGTGTGCGA
AGAGGAATACGCGACGGAATTCTGCGAGCGTAAGCAGGAGGTGCGGGAAC
AACCAATGACCAATGGCTTTCGCTCGCTGTGAGAACCGCGACTTTGTACC
AGCATGGTGGCGAGTCGGCGGGGGCTGTTGTACCGTAAGCGCTCTAACCG
TTGCGCATGGACGGGGTCGTTTTCTTACAACTTTTACTGGGTTGTTTCCC
AAGTGTCTGTTCACCAATCCCTGCGTTTGTCGAATATTCCGACCTTTCGG
TTCACTCGCGGCACAGAACCGGCATGCCCAGATCGGGGGTCATGCCAGTA
CACACGTCCAGGCGCTCCCGTCTTGCTAGGGACCCGTACAGAACTCGTTC
TCCTGCTGGTGATAGCCCGCGCGGTTCGTTGGGCTTATGTCTCTGTGAAA
CTGTGTAAAAAAAATGTGTTCTCTGCAGGAGAGACAATCGAAGTCCGACG
ACCTCGCCGCCGAGGAGAAAGACATCCTCGAGCGCCAAGCGGTGAGCACG
CTTGAATACGGATGCTCATCCGCTTCTTACTGAGATGTCGGAGTGCAGTC
CACTCGGTTGAGGTTAATGGAACTCCCCTTGCCTTCCCCTCACCCATTAC
CCCTCTAGATGCGATACACGACTGGCCTCGAACCCTCCGCACCACCGCTC
TACATGGTATCTGTAGCTGTAATTGCATCTTGAAGTTTGAAGTTCGATGT
CATTCTGCACTCTCTGCGCGGACTCGGTATCGCACGATTCCATGGCCTGC
CTGTCCCACCCTTTGACCTTGATCAGCCTTGTCCCCCCCACTGCCCGCCC
TCAGGTGTTGAAGAAGGCCTTATACGCAAGGTTCGGATCTTCCATACAGC
TGGAAGCCTGAGCGCTTTGAGGGTTGATACGCCTCCGTTCTTTTTTGCTC
TCTAGCGCCCAAAAAGTGCGGTATTAGTAATAGGACCTGCGAGGGAAACT
GATGGGAAGATTCGATAAGCTACCGTTCACCTCCAAGTGTGGTCACACTT
CGCAATCCCACCTTCACGGGGGGATTTGGTCCCAATATTTGGTGCCCGTC
TGTGCCTTTCCCAACGTCACGCAATGCCGTTCATTTGTCTGTGTGATAGA
ATATGGTGGTATCCACAAGGACCTTAATTCCGCACTTAGATATGCCAAAG
CTGTGCTTCTCCCCCTCAGAGGACTGACTTGATTTCGAAGGGTGGACATG
TTTCACCCTGAACTATTTCTTTTCTTGTTAACATTAATATCAAAACTCAA
CGACTCGCAGCCAGGGAGACATCACTTTGAGCCTAATGTTATACATCGAA
AGAGACGTGGTTACTTCTGACGGGGTGCCTAAGTAAAACCGCCTGCGTGT
TGACGACTCCCCAAGGAGCAAGGATAGACCGAACTGCGTTGAAGTCGCTG
CTCTTTCGGTGTCAGGGGCGAGCTGGAATCTACAGAAGAAGTACGGAATA
CAAGTGTAGTACCACCAGTATGCTCGAAGGGGTGCGGTGTAACACGCGAC
GGTTGAACGTGCGGATCATGGAAGATTGCAGGCCTGCAGCGGGTCCAGTG
CAAGCTCCGCTTGTGGCGTACCTTCGTCTGTGAAGTTACCCCTAGCGCCG
ACTGAAGAGTAATTCGAGTGACATTCTGAGATCAGTATTTTGTTTCATAC
GAGCAGCTCTGTGGCTCATCTACCTTCCCATGCACCTTAGTCGTAGTCCG
ATCCGCCCGTCGCGTCCCAAGAGGGGAGTCGTAGTCCCAACGCAGGAGAT
CGCTCACGCGAGGTCGCCGTAACCATGACAAGGGAAAGTTTTTGATGCGA
TCGTGTCGGTTCCTCGACGTGCAGGTTATGAGTGACTCCGCCGCGATCGT
GCCCTCAGCTTCCAGTTTTCAAGATGTCAGTTCCTCTCGAGGGTTGGGAG
CAAAGGCAATCCCCCGCTCGTGCCTTACCAATCTCGTCTCACCAGTCGCA
CGAATCTCAGCAATCTTCTGATAAAGTCTCACATGATTTAGTCATTCGTA
TACACCGTTCTCTATAAAACATGTCTTCGCAGCGATGCCGTTTTGTGCGC
TG back to topCoding sequence (CDS) from alignment at F-serratus_M_contig812:163555..175106+ >mRNA_F-serratus_M_contig812.19523.1 ID=mRNA_F-serratus_M_contig812.19523.1|Name=mRNA_F-serratus_M_contig812.19523.1|organism=Fucus serratus male|type=CDS|length=762bp|location=Sequence derived from alignment at F-serratus_M_contig812:163555..175106+ (Fucus serratus male) ATGATCGCTAGGGAAGAGGAGGTCGACGTCGAGATGATCGCTAGGGAAGA GGAGGTCGACGTCGAGGTTCGTCTAGAAGACCAACAGAAGATCAACGAGT TCGGCCGCCTCAACGCGCGATTAGTGGAGATCAGGGACGACAAAGCACAC GTCAAGGTTCGTCTAGAAGACCAACAGAAGATCAACGAGTTCGGCCGCCT CAACGCGCGATTAGTGGAGATCAGGGACGACAAAGCACACGTCAAGGATG TCTTGGACAAGCTCGACGATGCTACCACGGAGCTCATGAGTGGAGAAGGG GACTCGGTGATGCTGATGCTCGGTGACGGTTTTGTGGTGTGCGAAGAGGA ATACGCGACGGAATTCTGCGAGCGTAAGCAGGAGGATGTCTTGGACAAGC TCGACGATGCTACCACGGAGCTCATGAGTGGAGAAGGGGACTCGGTGATG CTGATGCTCGGTGACGGTTTTGTGGTGTGCGAAGAGGAATACGCGACGGA ATTCTGCGAGCGTAAGCAGGAGGAGAGACAATCGAAGTCCGACGACCTCG CCGCCGAGGAGAAAGACATCCTCGAGCGCCAAGCGGAGAGACAATCGAAG TCCGACGACCTCGCCGCCGAGGAGAAAGACATCCTCGAGCGCCAAGCGGT GTTGAAGAAGGCCTTATACGCAAGGTTCGGATCTTCCATACAGCTGGAAG CCTGAGTGTTGAAGAAGGCCTTATACGCAAGGTTCGGATCTTCCATACAG CTGGAAGCCTGA back to top
|