mRNA_F-serratus_M_contig126.1951.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig126.1951.1 vs. uniprot
Match: D7G777_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G777_ECTSI) HSP 1 Score: 194 bits (493), Expect = 4.610e-60 Identity = 101/174 (58.05%), Postives = 121/174 (69.54%), Query Frame = 1
Query: 100 MVEIDLYGSGGKPRWFMELNPKGEVPVLVADGNPIIGSEETVDYLMPGASNSVERRTLSSRWRAVINNGLKPEGKKAVLSGGSSADRAGLVAVLEDLDACLADDSVARAGRGDAEGSGPFVCGATFTAADASAFPFLQRVREEFGFPASCTRLGEWYAVASCRPSVRKTVRKNW 621
M E+ LYGSGGKP WFM+LNPKGEVPVLV DG PI+GSEETVD+LMPG E + RWR+++N+ LK GK+AV SGGS DR L AVL+DL+ACL++ RA FTAADASAFPFLQRV EFGFP+ C RL WYA AS RP VRKT+++++
Sbjct: 1 MKEVSLYGSGGKPSWFMDLNPKGEVPVLVVDGKPIVGSEETVDFLMPG-----ELSPEALRWRSIVNDRLKSAGKRAVFSGGSETDRNSLNAVLQDLEACLSNGPE-RASE--------------FTAADASAFPFLQRVHGEFGFPSECKRLEAWYASASSRPGVRKTIKQDF 154
BLAST of mRNA_F-serratus_M_contig126.1951.1 vs. uniprot
Match: A0A835ZAS3_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAS3_9STRA) HSP 1 Score: 178 bits (451), Expect = 4.720e-53 Identity = 107/215 (49.77%), Postives = 124/215 (57.67%), Query Frame = 1
Query: 1 MATA---ERVRFVTNTKCPYAQRTWIALEECGIEYEMVEIDLYGSGGKPRWFMELNPKGEVPVLV-ADGNPIIGSEETVDYLM----PGASNSVERRTLSSRWRAVINNGLKPEGKKAVLSGGSSADRAGLVAVLEDLDACLADDSVARAGRGDAEGSGPFVCGATFTAADASAFPFLQRVREEFGFPASCTRLGEWYAVASCRPSVRKTVRKNW 621
MATA R F+TN CPYAQR WIALEE G YEM E+ LYG+GGKP WF LNPKGEVPVLV ADG I SE +D+L P A R ++ RA++N LKP GK+AVL S A A L+A L ++DA LA GP+ CG F AADASAFPFL RVR+EFGFP L W R VR T+ +W
Sbjct: 1 MATAPSPRRANFITNKMCPYAQRVWIALEESGTPYEMAEVSLYGAGGKPAWFTALNPKGEVPVLVTADGAVIADSEAILDHLARPNSPLAPPPPCRAAHAAALRALVNARLKPAGKRAVLRP-SPAATAELMAALREIDAALATP-------------GPYACGDAFCAADASAFPFLWRVRKEFGFPDGARALEAWADACEARAGVRATLVGSW 201
BLAST of mRNA_F-serratus_M_contig126.1951.1 vs. uniprot
Match: A0A6V1LE72_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1LE72_HETAK) HSP 1 Score: 174 bits (440), Expect = 1.020e-50 Identity = 91/204 (44.61%), Postives = 120/204 (58.82%), Query Frame = 1
Query: 19 VRFVTNTKCPYAQRTWIALEECGIEYEMVEIDLYGSGGKPRWFMELNPKGEVPVLVADGNPIIGSEETVDYLMPGASNSVERRTLSSR---WRAVINNGLKPEGKKAVLSGGSSADRAGLVAVLEDLDACLADDSVARAGRGDAEGSGPFVCGATFTAADASAFPFLQRVREEFGFPASCTRLGEWYAVASCRPSVRKTVRKNW 621
+RFVTN CP+AQRTWIAL + G+E+EMVEI+LYGSGGKP WF+ LNP+GEVPVL G ++GSE T+D++ A+ + L WR N L P GK+AV SGG A L ++LE+ DA + +GPF+ G T AD S FP +QRV EFGFP +L W+ P+V +T + +W
Sbjct: 69 IRFVTNKMCPFAQRTWIALLQAGMEFEMVEINLYGSGGKPGWFLRLNPRGEVPVLDLGGGAVVGSEATLDHVAAAAAPELRPPGLEQEIKEWRRRTNEQLLPIGKRAVQSGGREA----LTSLLEEFDASV---------------TGPFLTGEQVTVADISMFPMMQRVESEFGFPQGSEKLRTWFDSMMALPAVSETCQASW 253
BLAST of mRNA_F-serratus_M_contig126.1951.1 vs. uniprot
Match: A0A7S1A063_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1A063_NOCSC) HSP 1 Score: 151 bits (381), Expect = 1.740e-42 Identity = 83/203 (40.89%), Postives = 114/203 (56.16%), Query Frame = 1
Query: 19 VRFVTNTKCPYAQRTWIALEECGIEYEMVEIDLYGSGGKPRWFMELNPKGEVPVLVADGNPIIGSEETVDYLMPGASNSVERRT-LSSRWRAVINNGLKPEGKKAVLSGGSSADRAGLVAVLEDLDACLADDSVARAGRGDAEGSGPFVCGATFTAADASAFPFLQRVREEFGFPASCTRL-GEWYAVASCRPSVRKTVRKNW 621
+ VTN CP+AQ+ W+ALEE + Y EI LYG GKP WF+ LNP+G+VPVLV DGN +I SE +D++ A + L ++WR I + P GK VL GGS ++A L A L +L+ L EG G + G +F+ ADA+A PF+QR+ EEF P T L W+ R V KT++++W
Sbjct: 12 LELVTNAMCPFAQKAWVALEESKLPYTSREISLYGPNGKPPWFLRLNPRGQVPVLVVDGNAVIDSESILDWIATEAQHMAPPDAHLGAQWRRCIGQRVAPGGKALVLGGGSQ-EKAILHAALRELEEILQ------------EGRGAYAAGGSFSVADAAAVPFMQRLCEEFDLPGDDTPLLRAWWERVKRRDGVAKTLQQSW 201
BLAST of mRNA_F-serratus_M_contig126.1951.1 vs. uniprot
Match: A0A7S1R7Y9_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1R7Y9_ALECA) HSP 1 Score: 147 bits (372), Expect = 1.050e-40 Identity = 76/201 (37.81%), Postives = 113/201 (56.22%), Query Frame = 1
Query: 28 VTNTKCPYAQRTWIALEECGIEYEMVEIDLYGSGGKPRWFMELNPKGEVPVLV-ADGNPIIGSEETVDYLMPGASN-SVERRTLSSRWRAVINNGLKPEGKKAVLSGGSSADRAGLVAVLEDLDACLAD-DSVARAGRGDAEGSGPFVCGATFTAADASAFPFLQRVREEFGFPASCTRLGEWYAVASCRPSVRKTVRKNW 621
VTN CP+AQ+ W+ALEE G+ + + EI LYG+GGKP WFM+LNPKGE+PVL+ + G ++ SE+ +D++ S E + +R I+ + P GK V+ GG A +DLD L D + + A G + G F+ ADA+A PF+QR+ E +G P L W+ + RP V T++++W
Sbjct: 50 VTNRMCPFAQKAWVALEESGVPFSLTEISLYGAGGKPEWFMKLNPKGEIPVLIKSGGGAVVDSEKILDWVAKEVPEMSPEDAAAGTAFRRCISGRVAPAGKSRVIRGGGGAG--------DDLDKALGDLNDLLEASPGS------YAAGDCFSVADAAAVPFVQRLDERYGLPEEAAALRRWWELVRARPGVAATLQRSW 236
BLAST of mRNA_F-serratus_M_contig126.1951.1 vs. uniprot
Match: A0A0G4FU02_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FU02_VITBC) HSP 1 Score: 145 bits (365), Expect = 2.880e-40 Identity = 86/201 (42.79%), Postives = 115/201 (57.21%), Query Frame = 1
Query: 43 CPYAQRTWIALEECGIEYEMVEIDLYGSGGKPRWFMELNPKGEVPVLVADGNPIIGSEETVDYLMPGASNSVERRTLSSR--WRAVINNGLKPEGKKAVLSGGSSADRAGLVAVLEDLDACLADDSVARAGRGDAEGSGPFVCGATFTAADASAFPFLQRVREEFG------FPASCTRLGEWYAVASCRPSVRKTVRKNW 621
CP+AQRTWIALEE G+ Y++ E+ LYG+GGKP+WF++LNPKG VPVLV DG P+ SE T+D + A S+ T S R WR ++ L P GK AVL+ SS + A L V+ + +A L + G G F+CG + AD SA PF R++EE FP + EW A R +VR+T +W
Sbjct: 2 CPFAQRTWIALEEAGLPYKLTEVSLYGAGGKPKWFLDLNPKGLVPVLVIDGQPVAESEATLDAIAELAP-SLATPTPSKRQQWRDMLEQRLIPVGKAAVLNP-SSKNMAALRVVIAEWEAKLRERP----------GKGHFLCGEALSIADVSAVPFWSRLQEEMDCVGAEEFPLT----HEWLAACRAREAVRRTQMSSW 186
BLAST of mRNA_F-serratus_M_contig126.1951.1 vs. uniprot
Match: A0A7R9WB00_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WB00_9STRA) HSP 1 Score: 139 bits (351), Expect = 1.290e-37 Identity = 83/210 (39.52%), Postives = 111/210 (52.86%), Query Frame = 1
Query: 22 RFVTNTKCPYAQRTWIALEECGIEYEMVEIDLYGSGGKPRWFMELNPKGEVPVLVADGNP--IIGSE----ETVDYLMPGAS----NSVERRTLSSRWRAVINNGLKPEGKKAVLSGGSSADRAGLVAVLEDLDACLADDSVARAGRGDAEGSGPFVCGATFTAADASAFPFLQRVREEFG---FPASCTRLGEWYAVASCRPSVRKTVR 612
+F TN CPYAQ+ WIALE G YEM E+ LYG+GGKP WF++LNP G+VPVL G I SE D ++ G S +S + R WR I N + P GK AV GG + L+++L++LD + GP++CG T T AD +AFPFL R+ +EFG C + +W + PS KTV+
Sbjct: 42 QFYTNKMCPYAQKVWIALEVGGCPYEMTEVSLYGAGGKPDWFLDLNPDGQVPVLTCFGGAKIFIDSEYILSRIADGVVEGGSKLSMDSDDDREKMEEWRHAIANRVNPIGKAAVQRGGKNVKE--LMSLLKELDGKV---------------KGPYLCGETVTVADCAAFPFLWRINDEFGPLTDEEGCGNIRKWLDTCAENPSFSKTVQ 234
BLAST of mRNA_F-serratus_M_contig126.1951.1 vs. uniprot
Match: A0A7S4K6F8_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K6F8_9STRA) HSP 1 Score: 134 bits (338), Expect = 2.770e-35 Identity = 77/215 (35.81%), Postives = 111/215 (51.63%), Query Frame = 1
Query: 22 RFVTNTKCPYAQRTWIALEECGIEYEMVEIDLYGSGGKPRWFMELNPKGEVPVLVADGNPII-------------GSEETVDYLMPGASNSVERRTLSSRWRAVINNGLKPEGKKAVLSGGSSADRAGLVAVLEDLDACLADDSVARAGRGDAEGSGPFVCGATFTAADASAFPFLQRVREEFGFPAS--CTRLGEWYAVASCRPSVRKTVRKNW 621
+F TN CP+AQ+ WIALE G +EM+E+ LYG+GGKP WFM+LNP+G+VPVL G I G E LMP + + E+ WR I+N + P GK AV GG + D L+ +L+++D + GP++CG T AD +AFPFL R+ +E+ C + +W + P+ KT++ W
Sbjct: 72 QFYTNKMCPFAQKVWIALEVGGCPHEMIEVSLYGAGGKPDWFMDLNPEGQVPVLTCFGGAKIFIDSEYILTRIADGVVEGGSKLMPDSDVNKEKM---EEWRHDISNRVIPIGKLAVQKGGKNVDE--LMELLKEMDVKI---------------KGPYLCGDAVTVADCAAFPFLWRINDEWPLTEENGCENIRKWLDKCTANPAFAKTIQGAW 266
BLAST of mRNA_F-serratus_M_contig126.1951.1 vs. uniprot
Match: A0A7S0CP74_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CP74_9EUKA) HSP 1 Score: 119 bits (297), Expect = 2.390e-30 Identity = 72/180 (40.00%), Postives = 95/180 (52.78%), Query Frame = 1
Query: 100 MVEIDLYGSGGKPRWFMELNPKGEVPVL-VADGNPIIGSEETVDYLMPGASN-----SVERRTLSSRWRAVINNGLKPEGKKAVLSGGSSADRAGLVAVLEDLDACLADDSVARAGRGDAEGSGPFVCGATFTAADASAFPFLQRVREEFGFPASCTRLGEWYAVASCRPSVRKTVRKNW 621
MVE+ LYG+GGKP WF +LNPKGEVPV+ DG+ + SE+T+DY+ + S E L + WR INN LKP GK+ V+ G D L VL++L+ + P V G FT ADASA PF QR+ +E+ RL +WY S V+ T R +W
Sbjct: 1 MVEVSLYGAGGKPDWFWKLNPKGEVPVIQTLDGSVVADSEQTLDYIADNFAKDMRGMSKEDMRLITAWRTCINNKLKPIGKR-VVCGSERLDS--LHKVLQELEELVVT---------------PCVVGHQFTVADASAIPFFQRLEKEYELLKDYPRLSKWYKHTSSLEGVKSTFRSSW 162
BLAST of mRNA_F-serratus_M_contig126.1951.1 vs. uniprot
Match: L1JRP8_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JRP8_GUITC) HSP 1 Score: 122 bits (306), Expect = 9.140e-30 Identity = 73/214 (34.11%), Postives = 108/214 (50.47%), Query Frame = 1
Query: 4 ATAERVRFVTNTKCPYAQRTWIALEECGIEYEMVEIDLYGSGGKPRWFMELNPKGEVPVLVADGNPIIGSEETVDYLMP--GASNSVERRTLS--SRWRAVINNGLKPEGKKAVLSGGSSADRAGLVAVLEDLDACLADDSVARAGRGDAEGSGPFVCGATFTAADASAFPFLQRVREE---FGFPAS-CTRLGEWYAVASCRPSVRKTVRKNW 621
AT V TN CP+AQ+ WIALEE ++Y++VEI LYGSGGKPRWF+++NPKG+VPVL ++ S+E + Y+ G++ + + S + W + + + P GK + GS L L ++ + GPF+ G FT AD ++ PF QR+ E G ++ WY +PS TV K+W
Sbjct: 62 ATMSDVTLYTNKMCPFAQKAWIALEEKKVKYDLVEISLYGSGGKPRWFLDMNPKGQVPVLKHGDKVVVESDEILKYIDQHMGSTGDLTKGHESDVAAWMKFLGSEVLPSGKALINGYGSKTS---LNEALRRMEERI---------------QGPFIFGGDFTLADIASAPFFQRMMTEQARLGLNRQEYPKIFAWYEAIKAKPSFSNTVVKSW 257 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig126.1951.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig126.1951.1 >prot_F-serratus_M_contig126.1951.1 ID=prot_F-serratus_M_contig126.1951.1|Name=mRNA_F-serratus_M_contig126.1951.1|organism=Fucus serratus male|type=polypeptide|length=212bp MATAERVRFVTNTKCPYAQRTWIALEECGIEYEMVEIDLYGSGGKPRWFMback to top mRNA from alignment at F-serratus_M_contig126:433682..435417+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig126.1951.1 ID=mRNA_F-serratus_M_contig126.1951.1|Name=mRNA_F-serratus_M_contig126.1951.1|organism=Fucus serratus male|type=mRNA|length=1736bp|location=Sequence derived from alignment at F-serratus_M_contig126:433682..435417+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig126:433682..435417+ >mRNA_F-serratus_M_contig126.1951.1 ID=mRNA_F-serratus_M_contig126.1951.1|Name=mRNA_F-serratus_M_contig126.1951.1|organism=Fucus serratus male|type=CDS|length=1272bp|location=Sequence derived from alignment at F-serratus_M_contig126:433682..435417+ (Fucus serratus male)back to top |