mRNA_F-serratus_M_contig811.19518.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig811.19518.1 vs. uniprot
Match: A0A7D9IUY0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IUY0_PARCT) HSP 1 Score: 202 bits (514), Expect = 8.290e-53 Identity = 161/507 (31.76%), Postives = 239/507 (47.14%), Query Frame = 1
Query: 1 CETCFQVKAKRHAVPKKTDERASVKGQRFFVDVGGPMKHSSLGVNNYVVIFVDDYTRFKVVKFVKKKSDTTAALLSLVADYITPQKLTIKCIRTDNGGEFEGE-FQRELDRRSITHEHTPPDTPQYNGVAERALGVLREKAIILMEELDDVINVPREKLWTQAMLFACDVTNKSVTTSTNEGKSPYELWFGKSPTANHLRPFGAVGYAR-QSVRENKMAPKGEKCVFMGIPRNFPTGTVSVLL--------VRSRNIV-ERQAVQWMDGPKKTGSDGT----GSDDCGKKPAEGDTIVERGTPQLNVQELGQEQHEHEGLEAIPELEGERQGPVALF----------LAGDRGRRRKRREGCMAMQA---TLDVPEPRNRRQAMELHEWDEWRKAEKTEMLGMVENYVYNQVARPKDELVIGTKMLYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIP 1437
CE+C K R PK T RAS + DV GPM S G + Y V F+DDY+++ V F+K K + V+ Y+ +K +R+DNGGE+ + F+ L I H+ T P P+ NG AER L E A +M +P+E W +A+ A N+S T S N +P+E F + P ++L+ FG V Y + K+ K KC+F+G +P GT L +RSR+++ E ++ + + S+ +D P G ++ +NV EQ+ LE L+ A + L R RR R M + A T D+ EPRN +A +W+KA +E ++EN + V P D+ ++G++ ++K K DG VEK+K RLVAQG+ Q EG+ Y E +SP SIR LLA A D E+ D AFL+ D+ +EIY++ P
Sbjct: 473 CESCVMGKQHRTPFPKDTRHRASELFEIIHTDVCGPMHVKSFGNSKYFVTFIDDYSKYTQVYFLKSKDEVLEKFKEFVS-YVNTLGKKVKVLRSDNGGEYCSKAFKDYLKEHGILHQTTVPYNPEQNGTAERMNRTLLEAARSMMYHA----GMPKE-FWAEAVNTATYTRNRSPTNSLNNA-TPFECLFNRKPDVSNLKVFGCVAYVHIPDHQRKKLEEKSRKCMFVG----YPDGTKGFKLYDLTKKTFIRSRDVIFEERSFHKFKYEQSSESNSDVYYPAKEDSQVNPPIGQVQIQADDENVNV-----EQNPQPILENNVPLQENNNRVGARYEDNFMREVENLNQPRQRRAPERYEEMYVCADDLTADINEPRNISEAWSNEYNTQWKKATDSEFNALMENGTWELVPPPDDKNIVGSRWVFKVKRKADGSVEKFKARLVAQGYSQTEGIDYNEVFSPVVRNTSIRSLLALANILDWEIHQMDVRTAFLQGDLTDEIYMKQP 963
BLAST of mRNA_F-serratus_M_contig811.19518.1 vs. uniprot
Match: A0A7D9HXK4_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HXK4_PARCT) HSP 1 Score: 199 bits (507), Expect = 4.870e-52 Identity = 166/504 (32.94%), Postives = 244/504 (48.41%), Query Frame = 1
Query: 1 CETCFQVKAKRHAVPKKTDERASVKGQRFFVDVGGPMKHSSLGVNNYVVIFVDDYTRFKVVKFVKKKSDTTAALLSLVADYITPQKLTIKCIRTDNGGEFEG-EFQRELDRRSITHEHTPPDTPQYNGVAERALGVLREKAIILMEELDDVINVPREKLWTQAMLFACDVTNKSVTTSTNEGKSPYELWFGKSPTANHLRPFGAVGYAR-QSVRENKMAPKGEKCVFMGIPRNFPT----GTVSVLLVRSRNIVERQAVQWMDGPKKTGS--DGTGSDDCGKKPAEGDTIVERGTPQLNVQELGQEQHEHEGLEAIPELEGERQG---PVA-----LFLAGDR--GRRRKRR------EGC-MAMQATLDVPEPRNRRQAMELHEWDEWRKAEKTEMLGMVENYVYNQVARPKDELVIGTKMLYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIP 1437
CE C + K R PK D RAS + + DV GPM SLG + Y V F+DDY+R+ V F+K KS+ IK +R+DNGGE+ EF+ L + I H+ + P P NGVAER + E ++ ++P E W +A+ + V N+S T + N+ +PYE F K P ++LR FG + Y + K+ K K +FMG P VS +RSR+++ + ++ D +T S D DD I+ TP + + Q E EG +Q PV F+ R G RR RR E C +A T D+ EP N +A EW++A +E ++EN + V+ PK + V+G+K ++K K ++G V++YK RLVAQG+ Q EGV Y+E +SP +IR LLA + AK+ E+ D + AFL+ ++ EEIY+ P
Sbjct: 369 CEACIKGKYHRCPYPKTADYRASEPFEHVYSDVCGPMSVPSLGGSRYYVSFIDDYSRYTFVYFMKNKSEVLEKFKEFHTFATNITGKPIKVLRSDNGGEYSSKEFESFLKKNGIVHQLSVPYNPAQNGVAERMNRTVVETTRSMLSHA----HIPNE-FWAEAVNTSVYVRNRSPTKALND-ITPYECLFEKKPDVSNLRVFGCITYMHIPDNQRKKLDAKSRKSIFMGYPEGVKGYKLYDPVSRKFLRSRDVIFLEK-KFHDFDIQTSSNFDDRAEDDI--------PIMIEETPV----DGNENQDEIANQRVAENAEGNQQANDQPVGGTFEETFMNEVRNVGERRMRRPPNRFDEECYLANDITADINEPINMDEAFSGEHSAEWKQATDSEYNSLIENETWELVSLPKGKNVVGSKWVFKVKRDENGCVQRYKARLVAQGYTQAEGVDYSEVFSPVVRNTTIRSLLALSNAKNWEVHQMDVKTAFLQGNL-EEIYMRQP 852
BLAST of mRNA_F-serratus_M_contig811.19518.1 vs. uniprot
Match: A0A6S7HNY1_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HNY1_PARCT) HSP 1 Score: 197 bits (501), Expect = 4.220e-51 Identity = 157/501 (31.34%), Postives = 245/501 (48.90%), Query Frame = 1
Query: 1 CETCFQVKAKRHAVPKKTDERASVKGQRFFVDVGGPMKHSSLGVNNYVVIFVDDYTRFKVVKFVKKKSDTTAALLSLVADYITPQKLTIKCIRTDNGGEF-EGEFQRELDRRSITHEHTPPDTPQYNGVAERALGVLREKAIILMEELDDVINVPREKLWTQAMLFACDVTNKSVTTSTNEGKSPYELWFGKSPTANHLRPFGAVGYARQSVRENK-MAPKGEKCVFMGIPRNFPTGTVSVLLV--RSRNIVERQAVQWMDGPKKTGSDGTGSDDCGKKPAEGDTIVERGTPQLNVQELGQEQHEHEGLEAIPELEGERQG----PVAL-----FL--AGDRGRRRKRR------EGC-MAMQATLDVPEPRNRRQAMELHEWDEWRKAEKTEMLGMVENYVYNQVARPKDELVIGTKMLYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIP 1437
CE C K R P +RA+ + DV GPM +S+G + Y V F+DDYTR+ V F+K K + A V ++K +RTDNGGE+ EF+ L + I H+ T P P NGV+ER L E +M + + W +A+ A + N+S TTS E +PYE F + P ++LR FG +A ++ K K K VF+G +P GT L +R + + + +++G DG C D ++ PQ+ +Q++ E + E + E E ER+ PV F+ G+ G +R+RR + C +A T D+ EP + ++A EW++A +E +++N + V PK + ++G++ ++K K DG VE++K RLVAQG+ Q +G+ Y E +SP SIR LLA A D E+ D + AFL+ ++DE I+++ P
Sbjct: 459 CEGCIMGKQHRTKYPSGVAKRATEPFELVHSDVCGPMSVNSIGGSRYFVTFIDDYTRYTYVYFIKHKDEVLAKFKEFVNLATNLTGKSVKTLRTDNGGEYCSKEFESFLKEKGIVHQLTVPYNPAQNGVSERMNRTLVESTRSMMSHGKTPV-----EFWAEAINTAVYLRNRSPTTSLKE-ITPYECLFKQKPDVSNLRVFGCEAFAHIPEKQRKKFDEKSRKAVFIG----YPEGTKGYKLYDPSTRKFIRSRDIVFVEGKFHDFKDGCSGKTCTDFYIPVDDVI----PQVEIQDVPAVVIEGDHNELVDE-ENEREEVHVQPVGATYEENFMRETGNLGDKRQRRAPSRFDDKCYVADNLTADINEPVHIQEAWTGDHSVEWKEATDSEYESLMKNDTWELVPPPKGKNIVGSRWVFKVKHTADGSVERFKARLVAQGYSQSQGIDYQEIFSPVVRYTSIRSLLAVANICDWEISQMDVKTAFLQGELDEVIFMKQP 944
BLAST of mRNA_F-serratus_M_contig811.19518.1 vs. uniprot
Match: A0A7D9D6Q5_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9D6Q5_PARCT) HSP 1 Score: 194 bits (493), Expect = 3.440e-50 Identity = 161/502 (32.07%), Postives = 240/502 (47.81%), Query Frame = 1
Query: 4 ETCFQVKAKRHAVPKKTDERASVKGQRFFVDVGGPMKHSSLGVNNYVVIFVDDYTRFKVVKFVKKKSDTTAALLSLVADYITPQKLTIKCIRTDNGGEFEG-EFQRELDRRSITHEHTPPDTPQYNGVAERALGVLREKAIILMEELDDVINVPREKLWTQAMLFACDVTNKSVTTSTNEGKSPYELWFGKSPTANHLRPFGAVGYAR-QSVRENKMAPKGEKCVFMGIPRNFPT----GTVSVLLVRSRNIVERQAVQWMDGPKKTGS--DGTGSDDCG----KKPAEG----DTIVER-------GTPQLNVQELGQEQHEHEGLEAIPELEGERQGPVALFLAGDRGRRRKRREGC-MAMQATLDVPEPRNRRQAMELHEWDEWRKAEKTEMLGMVENYVYNQVARPKDELVIGTKMLYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIP 1437
E C + K R PK D RAS + DV GPM SLG + Y V F+DDY+R+ V F+K KS+ + IK + +DNGGE+ EF+ L + I H+ + P P NGVAER + E ++ ++P E W +A+ + V N+S T + N+ +PYE F K P ++LR FG + Y + K+ K K +FMG P VS +RSR+++ + ++ D +T S D DD + P +G D I + G Q N Q +G E E E + P F E C +A T D+ EP N +A EW++A +E ++EN + V+ PK + V+G+K ++K K ++G V++YK RLVAQG+ Q EGV Y+E +SP +IR LLA + AK+ E+ D + AFL+ +++EEIY+ P
Sbjct: 457 EACIKGKHHRCPYPKTADYRASEPFELVHSDVCGPMSVPSLGGSRYYVSFIDDYSRYIFVYFMKNKSEVLEKFKEFHTYAMNITGKPIKVLHSDNGGEYSSKEFESFLKKNGIVHQLSVPYNPAQNGVAERMNRTVVETTRSMLSHA----HIPNE-FWAEAVNTSVYVRNRSPTKALND-ITPYECLFEKKPDVSNLRVFGCITYMHIPDNQRKKLDAKSRKSIFMGYPEGVKGYKLYDPVSRKFLRSRDVIFLEK-KFHDFDIQTSSNFDDRAEDDIPIMIEETPVDGNENQDEIANQRVAENAEGNQQANDQPVGGTFEETFMNEVRNVGEHRMRTPPNRFD-----------EECYLANDITADINEPINMDEAFSGEHSAEWKQATDSENNSLIENETWELVSLPKGKNVVGSKWVFKVKTDENGCVQRYKARLVAQGYTQAEGVDYSEVFSPVVRNTTIRSLLALSNAKNWEVHQMDVKTAFLQGNLEEEIYMRQP 940
BLAST of mRNA_F-serratus_M_contig811.19518.1 vs. uniprot
Match: A0A224X581_9HEMI (Putative polyprotein (Fragment) n=1 Tax=Panstrongylus lignarius TaxID=156445 RepID=A0A224X581_9HEMI) HSP 1 Score: 194 bits (494), Expect = 3.520e-50 Identity = 153/510 (30.00%), Postives = 243/510 (47.65%), Query Frame = 1
Query: 1 CETCFQVKAKRHAVPKKTDERASVKGQRFFVDVGGPMKHSSLGVNNYVVIFVDDYTRFKVVKFVKKKSDTTAALLSLVADYITPQKLTIKCIRTDNGGEFEG-EFQRELDRRSITHEHTPPDTPQYNGVAERALGVLREKAIILMEELDDVINVPREKLWTQAMLFACDVTNKSVTTSTNEGKSPYELWFGKSPTANHLRPFGAVGYA-RQSVRENKMAPKGEKCVFMGIP------RNFPTGTVSVLLVRSRNIVERQAV------------------QWMDGPKKTGSDGTGSDDCGKKPAEGDTIVERGTPQLNVQELGQEQHEHEGLEAIPELEGERQGPVALFLAGDRGRRRKRREGCMAMQATLDVPEPR-----NRRQAMELHEWDEWRKAEKTEMLGMVENYVYNQVARPKDELVIGTKMLYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIP 1437
C+TC + K R PK ER + DV GPM+ S G Y V F+DD +R+ V+F+K K + A VA T + I+C+++DNG EF EF L + I T TPQ NG+AER L + A L+ E +P W +A+ + + N+ + S EGK+PYELW G+ P ++ + FG+ + + R+ K + E+ +F+G R + T V + R +E+Q ++++ K+ GT D C + ++ +VE T ++ V ++ +P G G RGR RK+ +Q +V E + A+ E DEW A E+ +++N + V+RP+D+ VIG++++ + K DG +E+ K RLVAQGF Q GVH++E ++P +S+R+L A AA D ++ FD AFL +++EEIY+E P
Sbjct: 444 CDTCLKCKMTRTPFPKS--ERKTETLDIIHSDVCGPMRIESNGKARYFVTFIDDNSRWCEVRFIKSKDEVLQAFKEFVALIETQKGKKIRCLQSDNGTEFVNKEFDDFLKAKGIKRRLTVSYTPQQNGIAERKNRTLLDMARCLISES----KLP-PSFWAEAVYTSNYIRNRCPS-SCLEGKTPYELWTGRKPNVSYFKEFGSKVFCLNKDPRKGKFEDRSEEGIFLGYSEESKGFRIWKPKTKKVEITRDVKFLEKQNTISNEDSNLEEEKLESKGQEFIEIEFKSEEPGTFQDICDSQSSD---VVEENTSEIRV------------MKRLP-------GRPKRIRCGRRGRPRKQYNEIEIIQPDEEVAEYACLSEVPMKSALSSSEADEWFNAMMEEIKSVIKNKTWKIVSRPEDQHVIGSRIVLRNKYKPDGTLERRKARLVAQGFSQKPGVHFSETFAPVCRLSSVRLLAALAAHHDMKIHQFDITAAFLNGELEEEIYMEPP 923
BLAST of mRNA_F-serratus_M_contig811.19518.1 vs. uniprot
Match: A0A8J6L9W6_TENMO (Uncharacterized protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6L9W6_TENMO) HSP 1 Score: 194 bits (493), Expect = 4.500e-50 Identity = 156/492 (31.71%), Postives = 237/492 (48.17%), Query Frame = 1
Query: 1 CETCFQVKAKRHAVPKKTDERASVKGQRFFVDVGGPMKHSSLGVNNYVVIFVDDYTRFKVVKFVKKKSDTTAALLSLVADYITPQKLTIKCIRTDNGGEFEGE-FQRELDRRSITHEHTPPDTPQYNGVAERALGVLREKAIILMEELDDVINVPREKLWTQAMLFACDVTNKSVTTSTNEGKSPYELWFGKSPTANHLRPFGA-VGYARQSVRENKMAPKGEKCVFMGIPRNFPTGTVSVLLVRSRNIVERQAVQWMDGPKKTGSDGTG--SDDCGKKPAEGDTIVERGTPQLNVQELGQEQHEHEGLEAIPELEGE-----RQGPVALFLAGDRGRRRK----RREGCMAMQATLDVPEPRNRRQAMELHEWDEWRKAEKTEMLGMVENYVYNQVARPKDELVIGTKMLYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIP 1437
CE C Q K R PK++D R S + DV GPM+ S+ Y + F+DD +R+ VV+F++ KS+ A + Q IK +TDNGGE+ E F L IT T P P+ NG+AER L + A LM + +P W +A+ A + N+ + S G++PYE+W GK P +H R FG V + K + ++ VF+G + V + R + + V++++G +K T DD K G+T + ++ E+ E+ E E+E E +G L G RGR RK + G ++A + E R AM E DEW A E+ +++N + V RP D VIG++++ + K G +E+ K RLVAQGF Q GVH+ E ++P +SIR+L + AA D +R FD A+L +++EEI++E P
Sbjct: 328 CEVCLQGKMVRTPFPKRSD-RTSELLELIHSDVCGPMRVESMSKARYFIEFIDDCSRWTVVRFLRSKSEAIEATKGFITMVENQQGKKIKTFQTDNGGEYTSEQFDNLLKGLGITRRFTIPHNPEQNGIAERKNRTLLDMARCLMLQS----GLP-PSFWAEAVNTANYIRNRCPSKSLG-GRTPYEVWTGKKPNVSHFREFGCRVFRLDRQPNRGKFDSRAKEGVFLGYSEE--SKGYRVWMPNERKVEITRDVKFLEGTEKKAEIFTEFVPDDLFK----GETDEVESPRYVGIEMRSAEEVENPEEEVQDEIEEEPVVRRERGRPRLVRTGARGRPRKVCRFQEAGTAEIEAEAFISEI-PARIAMNSPEVDEWYDAMAVEIRSIIKNNTWKLVKRPDDREVIGSRIVLRNKYNAKGTLERRKARLVAQGFSQRPGVHFKETFAPVARLSSIRLLASIAAQYDMNIRQFDVTCAYLNGELEEEIFMEPP 805
BLAST of mRNA_F-serratus_M_contig811.19518.1 vs. uniprot
Match: Q5MG99_IPOBA (Hypothetical retrotransposon n=1 Tax=Ipomoea batatas TaxID=4120 RepID=Q5MG99_IPOBA) HSP 1 Score: 186 bits (473), Expect = 2.040e-47 Identity = 160/500 (32.00%), Postives = 228/500 (45.60%), Query Frame = 1
Query: 1 CETCFQVKAKRHAVPKKTDERASVKGQRFFVDVGGPMKHSSLGVNNYVVIFVDDYTRFKVVKFVKKKSDTTAALLSLVADYITPQKLTIKCIRTDNGGEFEGEFQRELDRRSITHEHTPPDTPQYNGVAERALGVLREKAIILMEELDDVINVPREKLWTQAMLFACDVTNKSVTTSTNEGKSPYELWFGKSPTANHLRPFGAVGYARQSVRE-NKMAPKGEKCVFMGIPRNFPT------GTVSVLLVRSRNIV--ERQAVQWMDGPKKTGSDGTGS------------DDCGKKPAEGDTIVERGTPQLNVQELGQEQHEHEGLEAIPELEGERQGPVALFLAGDRGRRRKRREGCMAMQATLDVPEPRNRRQAMELHEWDEWRKAEKTEMLGMVENYVYNQVARPKDELVIGTKMLYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIP 1437
C C K +R + R S DV GPMK SLG +Y V F+DDY+R V +K KSD A +KCIRTDNGGE+ G F R I H+ TPP PQ NG+AER + E+ + LDD +P W +A+ A V N S + + + P ++W GK + +HLR FG + E +K+ K +C+F+G F V LVRSR++V E Q ++ +D K+ S +GS DD + V+ G P + Q + H E E Q PV L DR RR R D EP + +AME + +W +A + EM + N + V PK+ + + +Y+ K + V ++K RLV +GF Q +G+ + E +SP +SIR++L AA D E+ D + AFL D+DEEIY+E P
Sbjct: 452 CVHCLAGKQRRVSFMSHPPTRKSEPLDLIHSDVCGPMKVRSLGGASYFVTFIDDYSRKLWVYTLKHKSDVLGVFKEFHALVERQTGKKLKCIRTDNGGEYCGPFDEYCRRYGIRHQKTPPKIPQLNGLAERMNRTIMERVRCM---LDDA-KLP-SSFWAEAVSTAVHVINLSPVIAL-KNEVPDKVWCGKDVSYDHLRVFGCKAFVHVPRDERSKLDSKTRQCIFIGY--GFDEFGYRLYDPVEKKLVRSRDVVFFENQTIEDIDKVKQPESRDSGSLVDIEPVSRRYTDDVDEVQEN----VQNGDPVPDYQGDTVDVDGHADDVVHQEQEVPSQVPVDLPRRSDRERRPSTRYSPSQYVLLTDGGEPESYEEAMESDQKRQWFEAMQEEMNSLYVNDTFELVKAPKNRKALKNRWVYRVKHEEGTSVPRFKARLVVKGFSQKKGIDFDEIFSPVVKFSSIRVVLGLAARLDIEIEQMDVKTAFLHGDLDEEIYMEQP 939
BLAST of mRNA_F-serratus_M_contig811.19518.1 vs. uniprot
Match: UPI001EFFA561 (DDE-type integrase/transposase/recombinase n=1 Tax=Corynebacterium parakroppenstedtii TaxID=2828363 RepID=UPI001EFFA561) HSP 1 Score: 185 bits (469), Expect = 5.870e-47 Identity = 152/492 (30.89%), Postives = 229/492 (46.54%), Query Frame = 1
Query: 1 CETCFQVKAKRHAVPKKTDERASVKGQRFFVDVGGPMKHSSLGVNNYVVIFVDDYTRFKVVKFVKKKSDTTAALLSLVADYITPQKLTIKCIRTDNGGEFEGEFQRELDRRSITHEHTPPDTPQYNGVAERALGVLREKAIILMEELDDVINVPREKLWTQAMLFACDVTNKSVTTSTNEGKSPYELWFGKSPTANHLRPFGAVGYARQSVRE-NKMAPKGEKCVFMGIPRNF----PTGTVSVLLVRSRNIV--ERQAVQWMDGPKK---TGSDGTGSDDCGKKPAEGDT--IVERGTPQLNVQELGQE-QHEHEGLEAIPELEGERQGPVALFLAGDRGRRRKRREGCMAMQATLDVPEPRNRRQAMELHEWDEWRKAEKTEMLGMVENYVYNQVARPKDELVIGTKMLYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIP 1437
CE C K R + R + + D+ GPMK +LG Y V F+DD +R V +K K A +KCIRTDNGGE+ G F + I H+ TPP TPQ NG+AER L E+ L+ E +P W +A+L A V N S T + +G P ++W+GK + +HLR FG + E +K+ K +C+F+G + + LVRSR+IV E Q ++ ++ +K + SDG D + D + +R Q +VQ+ + + ++G+ P P R R R D EP ++AME +W +A + EM + EN+ Y V PK + K ++K KI + + +YK RLV +GF Q +G+ + E +SP +SIR +L AA+ + E+ D + AFL D++EEIY+E P
Sbjct: 220 CEHCLAGKQNRVSFKSNPPSRKTELLELVHSDLCGPMKTKTLGGALYFVTFIDDCSRKLWVYVLKTKDQVLGVFKQFQASVERETGKKLKCIRTDNGGEYCGPFDEYCKHQGIRHQKTPPKTPQLNGLAERMNRTLMERVRCLLSEA----KLPNS-FWGEALLTAAHVINLSPTVAL-QGDVPNKVWYGKDVSYDHLRVFGCKAFVHVPKDERSKLDAKTRQCIFVGYGLDEFGYRLYDPIEKKLVRSRDIVFMENQTIEDIEKAEKLESSSSDGVVHIDEVPHASVHDVGGLDDRDEAQDHVQDQHVDIDNNNDGVINDPPAHEVVDEPNIPLRRSTRQRVPSSRYSSNEYMLLTDGGEPECYKEAMEDEHRGQWIEAMQDEMKSLHENHTYELVKLPKGMKALKNKWVFKVKIEEHTQKPRYKARLVVKGFGQRKGIDFDEIFSPVVKMSSIRTVLGLAASLNLEIEQMDVKTAFLHGDLEEEIYMEQP 705
BLAST of mRNA_F-serratus_M_contig811.19518.1 vs. uniprot
Match: A0A6A3IYV4_9STRA (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3IYV4_9STRA) HSP 1 Score: 179 bits (454), Expect = 1.640e-46 Identity = 157/547 (28.70%), Postives = 240/547 (43.88%), Query Frame = 1
Query: 1 CETCFQVKAKRHAVPKKTDERASVKGQRFFVDVGGPMKHSSLGVNNYVVIFVDDYTRFKVVKFVKKKSDTTAALLSLVADYITPQKLTIKCIRTDNGGEF-EGEFQRELDRRSITHEHTPPDTPQYNGVAERALGVLREKAIILMEELDDVINVPREKLWTQAMLFACDVTNKSVTTSTNEGKSPYELWFGKSPTANHLRPFGAVGYAR-QSVRENKMAPKGEKCVFMGIPRNFPTGTVSVLLVRSRNIVERQAVQWMDGP----KKTGSDGTGSDDCGKKPAEGDTI--VERGTPQLNVQELGQEQHEHEGLEAIPEL--EGERQGPVALFLAGDRG-----------------RRRKRREGCMAMQATLDV------------PEPRNRR-----------------------------QAMELHEWDEWRKAEKTEMLGMVENYVYNQVARPKDELVIGTKMLYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIP 1437
C C + K A PK++ + S + DV GPMK +S G Y++ FVDD++R+ V F+KKKS+ + L + Y + C+R+DNG EF + + R I H+ T P +PQ NGVAER + EKA ++ +VP E W A+ A V N+S T +PYEL PT HLR FG+ GYA + K+ PK +C+F+G N V+ + + A + +G + D ++PA + + VE P +++Q + EQ + P L ER P L LA R R R+ RE ++ D P P+ R QAM + ++WR+A E+L N + V R IG + ++ +K Q G+V +YK RLVA+GF Q G+ + E YSP + SIR++L+ AA + + DA+ AFL +++ + +Y+E+P
Sbjct: 30 CGGCMKGKQTVEAFPKRSKTKTSRVLELVHRDVMGPMKSTSKGGAKYILTFVDDFSRYVVAYFLKKKSEVASKLKVFMRFYEKQWGERLMCLRSDNGTEFVKKDVARICTLNGIMHQRTVPYSPQQNGVAERMNRTIMEKARSMLHYK----SVPTE-WWAGAVSTAVYVINRSTNTQYTS-VAPYELCSKVKPTLEHLRVFGSHGYAHIDKAKRTKLEPKSFRCMFLGYAEN----------VKGYRVFDLDASKVKNGTVIHVSEDAHDAVTPAPVERQPAVEELMEGVENDAPDVSMQSVEPEQ------DPAPPLLFAEERPAPTGLELAPYRAPPTVFEDDRVVFHPPIHRSRRAREPVFLLEDGTDAEEERKSEGSDGPPSPKRARIDEDGLLAEAVLAYAASSGDAVDIPTTHAQAMASDDAEQWREARDAELLSHERNGTWTLVPRGTASRTIGCRWVFAKKRDQYGRVVRYKARLVAKGFKQKYGIDFFETYSPVANMNSIRVVLSVCAAYEYRMEQLDADTAFLNSELKDRVYMEVP 554
BLAST of mRNA_F-serratus_M_contig811.19518.1 vs. uniprot
Match: A0A8J6D8V3_9ROSI (Uncharacterized protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J6D8V3_9ROSI) HSP 1 Score: 183 bits (464), Expect = 3.470e-46 Identity = 151/496 (30.44%), Postives = 232/496 (46.77%), Query Frame = 1
Query: 1 CETCFQVKAKRHAVPKKTDERASVKGQRFFVDVGGPMKHSSLGVNNYVVIFVDDYTRFKVVKFVKKKSDTTAALLSLVADYITPQKLTIKCIRTDNGGEFEGEFQRELDRRSITHEHTPPDTPQYNGVAERALGVLREKAIILMEELDDVINVPREKLWTQAMLFACDVTNKSVTTSTNEGKSPYELWFGKSPTANHLRPFGAVGYARQSVRE-NKMAPKGEKCVFMGIPRNFPTG-----TVSVLLVRSRNIV--ERQAVQWMDGPKKTGSDGTGSDDCGKKPAEGDTIVERGTPQLNVQELGQEQHEHEGL--------EAIPELEGERQGPVALFLA-GDRGRRRKRREGCMAMQATLDVPEPRNRRQAMELHEWDEWRKAEKTEMLGMVENYVYNQVARPKDELVIGTKMLYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIP 1437
C C K +R + + R S + DV GP+K S G Y V F+DD +R V +K K+ A + +KCIRTDNGGE+ G F R+ I H+ TPP TPQ NG+AER L E+ L+ + +PR W +A+ V N S + +G P +WFGK + +HLR FG + E +K+ K +C+F+G + G V LVRSR++V E Q + +D +K S +G D PA D+ + ++ G +H+ + +A+ + + E P A+ L R RR R D EP +AM+ D+W +A K E+ + EN+ + V P+ + + + +Y+ K + +YK RLV +G+ Q +GV + E +SP +SIR +L+ AA D E+ D + AFL D++EE+Y+E P
Sbjct: 1205 CAHCLAGKQRRVSFRSRPPHRKSELLELVHSDVCGPIKVRSHGGALYFVTFIDDCSRKLWVYTLKSKNQVFEVFKQFQASVERETRKKLKCIRTDNGGEYTGLFHEYCLRQGIRHQRTPPKTPQLNGLAERMNRTLIERVRCLLSDA----KLPRS-FWAEALNTVAHVINLSPSVPL-QGDVPDRVWFGKDVSYDHLRVFGCKAFVHVPKDERSKLDAKTRQCIFIGYGLDGEFGYRLYDPVQKKLVRSRDVVFIEDQTIDDIDKTEKVDSQDSG-DLIDVNPAPLDSSPDPIQDDVH----GDVSDDHQDIGDFDTPMNDAVNDQQQEPIAPPAVPLRRSSRDRRSSVRYSSDEYVLLTDGGEPECYEEAMKSECKDQWVEAMKDELQSLHENHTFELVKLPEGKRALKNRWVYRLKQEEKSSSLRYKARLVVKGYAQKKGVDFEEIFSPVVKMSSIRTILSLAACYDLEVEQMDVKTAFLHGDLEEELYMEQP 1689 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig811.19518.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig811.19518.1 >prot_F-serratus_M_contig811.19518.1 ID=prot_F-serratus_M_contig811.19518.1|Name=mRNA_F-serratus_M_contig811.19518.1|organism=Fucus serratus male|type=polypeptide|length=479bp CETCFQVKAKRHAVPKKTDERASVKGQRFFVDVGGPMKHSSLGVNNYVVIback to top mRNA from alignment at F-serratus_M_contig811:50636..52309- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig811.19518.1 ID=mRNA_F-serratus_M_contig811.19518.1|Name=mRNA_F-serratus_M_contig811.19518.1|organism=Fucus serratus male|type=mRNA|length=1674bp|location=Sequence derived from alignment at F-serratus_M_contig811:50636..52309- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig811:50636..52309- >mRNA_F-serratus_M_contig811.19518.1 ID=mRNA_F-serratus_M_contig811.19518.1|Name=mRNA_F-serratus_M_contig811.19518.1|organism=Fucus serratus male|type=CDS|length=2874bp|location=Sequence derived from alignment at F-serratus_M_contig811:50636..52309- (Fucus serratus male)back to top |