prot_F-serratus_M_contig81.19504.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig81.19504.1
Unique Nameprot_F-serratus_M_contig81.19504.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length213
Homology
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BLAST of mRNA_F-serratus_M_contig81.19504.1 vs. uniprot
Match: D8LF17_ECTSI (Uncharacterized protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF17_ECTSI)

HSP 1 Score: 190 bits (483), Expect = 1.450e-52
Identity = 102/213 (47.89%), Postives = 136/213 (63.85%), Query Frame = 0 
Query:    3 DDDCRHHCEDGIWRRSIVEPTKSLNSGKSGP--QTAAASLLPDITCLAVSPIDDMMAVGTSDGYVFVMPTPPLPCASGGDGIDVGNGSGTTHRKXXXXXXXXXXXGKRVNCMLWDSGGDRLFSVCQGGTVIMARNLRPRRKAPASELPGMTGVMSFLGIQQLAEATLAPDPPPVPQAVIIGQAGSPGVQLDLGRTHTFLAAVKQGHRAIICDV 213
            +D  R   E+  W+R+++ PT++L SG + P    AAA++ PDITC+A++P    +AVGTSDG+VFV   PP P   G  G     GSG  H+            GKR+NC+LW + GD+L+SVC+GGTV++ARNLRPRR APA+   G+TGVM FLG+ Q  ++T A D P  PQA+++G  GSPGV LDLGRT   L    +G  A  CDV
Sbjct:   87 EDRVRRSSEEERWKRTVIYPTRALGSGVASPIESPAAAAVPPDITCVAIAPGGGKLAVGTSDGFVFVTQAPPPP-TGGSPGTGWARGSGFHHKSHR---------GKRINCLLWANSGDQLYSVCEGGTVVLARNLRPRRGAPAAGPAGITGVMQFLGVHQPDDSTKA-DTPASPQAIVVGHTGSPGVSLDLGRTRASLPGATKGFLA--CDV 286
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig81.19504.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LF17_ECTSI1.450e-5247.89Uncharacterized protein (Fragment) n=2 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 14..153
e-value: 3.0E-6
score: 28.3
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 43..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig81contigF-serratus_M_contig81:724460..732511 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig81.19504.1mRNA_F-serratus_M_contig81.19504.1Fucus serratus malemRNAF-serratus_M_contig81 724460..732513 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig81.19504.1 ID=prot_F-serratus_M_contig81.19504.1|Name=mRNA_F-serratus_M_contig81.19504.1|organism=Fucus serratus male|type=polypeptide|length=213bp
DKDDDCRHHCEDGIWRRSIVEPTKSLNSGKSGPQTAAASLLPDITCLAVS
PIDDMMAVGTSDGYVFVMPTPPLPCASGGDGIDVGNGSGTTHRKGSGGFH
HKSHGGKRVNCMLWDSGGDRLFSVCQGGTVIMARNLRPRRKAPASELPGM
TGVMSFLGIQQLAEATLAPDPPPVPQAVIIGQAGSPGVQLDLGRTHTFLA
AVKQGHRAIICDV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf