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Homology
BLAST of mRNA_F-serratus_M_contig81.19495.1 vs. uniprot
Match: D8LF30_ECTSI (C3HC-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF30_ECTSI) HSP 1 Score: 323 bits (827), Expect = 2.680e-101 Identity = 215/514 (41.83%), Postives = 266/514 (51.75%), Query Frame = 2
Query: 86 DLQERVEMTLARFDDAVKEMVNSTKTIVRHEHQPWNVSDNTVA--DVGKQSQGIPNCRPWDYDDFTSRLQTFTPLMWFAKPSAASPLMCARHGWINKGRDVLACSCCGKELHYKDKQDDKD-------------------------VPFSSRLTSAHHALCPWNGNACPVEFLQLPVRTVDDLRTEFQLCLESLVHLVAAAALPELSLPSDFEEHCPGGLPHLAAKTRALVTNTPGDSAAPPVRTRTARDYKNDSKMSGENTEKWLSDENVGISALADTGDEVLGVAAAVVLFGWRLVPP--PSSATI--------SSSTSKVEVT--------KASNRVCCELCNRRVAVDNFLTLSVTATSQKSSEPDARSDIDEYRGLTTGASTSRSRSSTSPKAGGDGVERVESSKRRRLSGGGTPLKPMDLVAEHRSFCPWARVHPIQEDARGNDTEGTGVPGWRRSLDAVLFEEAALSATSQSPLDSRDRG---DPPQNEAAVALQQVQKVLGVLTRY 1483
DL+E+V LARFD AV++ + + + +V + A D + P CRPWDY+ F +RL TFTPL WF+KP+ ASP +CAR+GWIN GRD L+C CC +L + D+ D FSSRL S HH LCPWNGNACP EFLQLP V+D +F L+SL+ ++ AAALPE+SLPS FE+HCPGGL LAAK V T +++ RTA +K SG+ + E + GDE+LG AAA+ +FGW+ P P SA SS+ S V V K+ R+ C LC RR+ DNFLTL +S TGA S S+ GG G S KRRRLSGGGTPLKPMDL EHRSFCPWA VHP G + VPGWR L+AVL + S Q ++RG D E ALQ+VQKVLGVL RY
Sbjct: 4 DLEEKVVAALARFDTAVRQANPIRLNQQQEDPREIDVLERIAAEADGARPLADKPTCRPWDYESFKARLATFTPLNWFSKPAFASPAVCARYGWINTGRDTLSCQCCSAQLRFADQAAGSDGNAANDDVCGXXXXXIVAVVEPTPSSSFSSRLQSQHHDLCPWNGNACPREFLQLPPMAVEDQLADFLARLDSLLPVMRAAALPEVSLPSTFEQHCPGGLSALAAKAMPSVVETREETSE----NRTAGAHKRQRSGSGKAAGSADNREMLRF------GDEMLGTAAAIAMFGWQSAPATVPVSACAAVSPTEGSSSNGSTVAVADGGARATAKSPARLSCALCKRRLVTDNFLTLEAGPSSGVG-----------CTAAGTGAEESPGVLSSPEGRGGSG----RSGKRRRLSGGGTPLKPMDLAVEHRSFCPWAAVHP---PVAGEEAIEGAVPGWRLPLEAVLGWQNP-SKQEQVLSTQKERGGFSDAANGEVEGALQKVQKVLGVLMRY 488
BLAST of mRNA_F-serratus_M_contig81.19495.1 vs. uniprot
Match: S8E2T9_9LAMI (C3HC-type domain-containing protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8E2T9_9LAMI) HSP 1 Score: 111 bits (277), Expect = 2.610e-24 Identity = 60/160 (37.50%), Postives = 86/160 (53.75%), Query Frame = 2
Query: 191 NVSDNTVADV---GKQSQGIPNCRPWDYDDFTSRLQTFTPLMWFAKPSAASPLMCARHGWINKGRDVLACSCCGKELHY-------KDKQDDKDVPFSSRLTSAHHALCPWNGNACPVEFLQLPVRTVDDLRTEFQLCLESLVHLVAAAALPELSLPSDF 640
NV++ ++ + K SQ P C+PWD DDF SRL TF + WFAKP SP+ CAR GWIN D + CS CG L + + + + V FS +L + H LCPW NAC + P + L +++ + SL ++A LP +SL ++F
Sbjct: 57 NVAEGSLTGLPGSSKLSQA-PTCKPWDRDDFFSRLSTFKSISWFAKPQVLSPVECARRGWINSDIDTVVCSYCGARLLFATPLSWTQQQVEKAAVVFSLKLEAGHKMLCPWINNACAEDIAHFPDVSSRVLAEDYKRRITSLSQIIA---LPAISLSTNF 212
BLAST of mRNA_F-serratus_M_contig81.19495.1 vs. uniprot
Match: A0A1W0A2Y4_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A2Y4_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 1.340e-18 Identity = 51/125 (40.80%), Postives = 70/125 (56.00%), Query Frame = 2
Query: 248 CRPWDYDDFTSRLQTFTPLMWFAKPSAASPLMCARHGWINKGRDVLACSCCGKELH-YKDKQDDKDVPFS------SRLTSAHHALCPWNGNACPVEFLQLPVRTVDD-----LRTEFQLCLESL 586
CRP ++DDF SR++TFT L WFAKP L+CA+HGWIN G D L C CC ++LH + D + ++ RLTS H CPW N P F L T+++ LR+ C+E++
Sbjct: 35 CRPNNWDDFLSRVRTFTSLNWFAKPLELDLLVCAQHGWINTGPDELHCQCCHEKLHCFIDSRLSQEGAHKVVNALRERLTSYHLNTCPWRENPSPASFCHLRFWTIEEGSEAVLRSIELTCIEAV 159
BLAST of mRNA_F-serratus_M_contig81.19495.1 vs. uniprot
Match: T0S3X1_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S3X1_SAPDV) HSP 1 Score: 94.0 bits (232), Expect = 2.300e-17 Identity = 45/114 (39.47%), Postives = 61/114 (53.51%), Query Frame = 2
Query: 236 GIPNCRPWDYDDFTSRLQTFTPLMWFAKPSAASPLMCARHGWINKGRDVLACSCCGKELHYKDKQDDKDVP---------FSSRLTSAHHALCPWNGNACPVEFLQLPVRTVDD 550
G+ CRP ++ DF R+ +F+ L WFAKP L+CA+HGW+N G DVL C CC L+ + D++ P RLTS H + CPW GN P F L + D+
Sbjct: 39 GVAKCRPNNWADFQHRVASFSTLHWFAKPLELDLLVCAQHGWVNDGPDVLQCECCHARLNCRI--DERLSPEGAHKVALGLHERLTSFHLSTCPWRGNPSPASFCHLHFWSADE 150
BLAST of mRNA_F-serratus_M_contig81.19495.1 vs. uniprot
Match: A0A446UPU7_TRITD (C3HC-type domain-containing protein n=2 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446UPU7_TRITD) HSP 1 Score: 95.9 bits (237), Expect = 3.710e-17 Identity = 47/135 (34.81%), Postives = 68/135 (50.37%), Query Frame = 2
Query: 146 VNSTKTIVRHEHQPWNVSDNTVADVGKQSQGIPNCRPWDYDDFTSRLQTFTPLMWFAKPSAASPLMCARHGWINKGRDVLACSCCGKELHYK-------DKQDDKDVPFSSRLTSAHHALCPWNGNACPVEFLQL 529
V+S+ + H + P + D VG P+CRPW+ D RL TF P W AKP AAS L+CA+ GW+N D + C CG L + + + F+++L ++H CPW GN+C +QL
Sbjct: 19 VDSSSHVAPHAYGPAHSFDA----VGTALDSAPSCRPWERGDLLRRLATFKPSTWEAKPKAASSLVCAQRGWVNVDMDKIECESCGAHLIFSALASWSPTEVTNAGEAFAAQLDASHKNSCPWRGNSCADNLVQL 149
BLAST of mRNA_F-serratus_M_contig81.19495.1 vs. uniprot
Match: A0A835IPN4_9MAGN (C3HC-type domain-containing protein n=1 Tax=Coptis chinensis TaxID=261450 RepID=A0A835IPN4_9MAGN) HSP 1 Score: 94.7 bits (234), Expect = 1.180e-16 Identity = 54/162 (33.33%), Postives = 74/162 (45.68%), Query Frame = 2
Query: 179 HQPWNVSDNTVADVGKQSQGIPNCRPWDYDDFTSRLQTFTPLMWFAKPSAASPLMCARHGWINKGRDVLACSCCGKELHY-------KDKQDDKDVPFSSRLTSAHHALCPWNGNACPVEFLQLPVRTVDDLRTEFQLCLESLVHLV-----AAAALPELSL 628
H+P N +T A P+CRPW+ D RL TF P W KP ASPL CAR GW++ D + C CG L + + D F+ +L AH CPW GN+C +Q P L F+ + L+ V AA+A+ ++ L
Sbjct: 78 HRPRNAL-STSAGGSALGSSQPSCRPWERGDLLRRLATFHPSNWSGKPKIASPLACARRGWVSVDVDRIVCESCGSNLSFVLLASWTPTEADIAGEAFAKQLDVAHGTSCPWRGNSCAESLVQFPPTPPSALIGGFKDRCDGLLQFVSLPVIAASAIGQMRL 238
BLAST of mRNA_F-serratus_M_contig81.19495.1 vs. uniprot
Match: A0A453LZW4_AEGTS (C3HC-type domain-containing protein n=40 Tax=Pooideae TaxID=147368 RepID=A0A453LZW4_AEGTS) HSP 1 Score: 94.0 bits (232), Expect = 2.000e-16 Identity = 46/135 (34.07%), Postives = 66/135 (48.89%), Query Frame = 2
Query: 146 VNSTKTIVRHEHQPWNVSDNTVADVGKQSQGIPNCRPWDYDDFTSRLQTFTPLMWFAKPSAASPLMCARHGWINKGRDVLACSCCGKELHYK-------DKQDDKDVPFSSRLTSAHHALCPWNGNACPVEFLQL 529
V+S+ + H + P + D G P+CRPW+ D RL TF P W AKP AAS L+CA+ GW+N D + C CG L + + + F+ +L ++H CPW GN+C +QL
Sbjct: 19 VDSSSHVAPHAYGPAHSFDA----AGTALDSAPSCRPWERGDLLRRLATFKPSTWDAKPKAASSLVCAQRGWVNVDMDKIECESCGAHLLFSAVASWSPTEVTNAGEAFAGQLDASHKNSCPWRGNSCADNLVQL 149
BLAST of mRNA_F-serratus_M_contig81.19495.1 vs. uniprot
Match: UPI000A2A7AB6 (nuclear-interacting partner of ALK n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A7AB6) HSP 1 Score: 90.5 bits (223), Expect = 1.570e-15 Identity = 51/150 (34.00%), Postives = 75/150 (50.00%), Query Frame = 2
Query: 203 NTVADVGKQSQGIPN-------CRPWDYDDFTSRLQTFTPLMWFAKPSAASPLMCARHGWINKGRDVLACSCC------------GKELHYKDKQDDKDVPFSSRLTSAHHALCPWNGNACPVEFLQLPVRTVDDLRTEFQLCLESLVHL 595
++ A++G +Q P+ C+P + F +R++TF+P WFAKP SPL C+ +GW N D+L C C E+ K Q+ KD L + H LCPW N CP F+QLP+ T D + +F + SL+ L
Sbjct: 21 SSAAELGASNQSDPSPKASLSACQPRSKEAFWTRVETFSPFTWFAKPLELSPLYCSLYGWENVDVDILRCVSCKACIDATMPSNWDPEIFTKSCQNLKDS-----LITGHTKLCPWPDNPCPDAFVQLPMYTQDQWKKDFVVRWHSLLSL 165
BLAST of mRNA_F-serratus_M_contig81.19495.1 vs. uniprot
Match: A0A6P8HAJ1_ACTTE (uncharacterized protein LOC116287189 n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HAJ1_ACTTE) HSP 1 Score: 88.6 bits (218), Expect = 5.750e-15 Identity = 50/132 (37.88%), Postives = 63/132 (47.73%), Query Frame = 2
Query: 248 CRPWDYDDFTSRLQTFTPLMWFAKPSAASPLMCARHGWINKGRDVLACSCCGKELHYKDKQDDKDVPFSSR-------LTSAHHALCPWNGNACPVEFLQLPVRTVDDLRTEFQLCLESLVHLVAAAALPEL 622
C+P + F SR++TF+P WFAKP SPL CA +GW N D+L C C L D F+ L H LCPW N CP F+QLP T + +F + SL+ L A LP L
Sbjct: 2 CQPRTKEAFWSRVETFSPFTWFAKPLELSPLHCALYGWENSDVDILHCVSCKASLDATMSTDWDPEMFTKSCKQLKDSLVIGHSKLCPWPDNPCPEIFIQLPAYTPSQWKEDFLIRWHSLLSL--GANLPSL 131
BLAST of mRNA_F-serratus_M_contig81.19495.1 vs. uniprot
Match: A0A151Z5E1_9MYCE (Uncharacterized protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151Z5E1_9MYCE) HSP 1 Score: 85.9 bits (211), Expect = 4.130e-14 Identity = 41/100 (41.00%), Postives = 54/100 (54.00%), Query Frame = 2
Query: 254 PWDYDDFTSRLQTFTPLMWFAKPSAASPLMCARHGWINKGRDVLACSCCGKELHYK-------DKQDDKDVPFS-SRLTSAHHALCPWNGNACPVEFLQL 529
PW+ D+ R+QT++ L WFAKPS PL C+R GW+N D+L C C K+L+YK D Q + F S +S H C W N CP F +L
Sbjct: 49 PWNSSDYYKRVQTYSVLNWFAKPSCIDPLECSRFGWVNCDFDMLECENCQKQLYYKIPSNLSLDVQSQRISDFKISVQSSGHRETCLWKDNGCPPYFARL 148
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 329.7 |
| Seed ortholog evalue | 2.2e-87 |
| Seed eggNOG ortholog | 2880.D8LF30 |
| Preferred name | ZC3HC1 |
| KEGG rclass | RC00003,RC00336 |
| KEGG ko | ko:K00565 |
| KEGG Reaction | R03805 |
| KEGG Pathway | ko03015,map03015 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0006403,GO:0006405,GO:0006406,GO:0006611,GO:0006810,GO:0006886,GO:0006913,GO:0008104,GO:0008150,GO:0008152,GO:0009966,GO:0009968,GO:0010467,GO:0010646,GO:0010648,GO:0010941,GO:0012505,GO:0015031,GO:0015833,GO:0015931,GO:0016020,GO:0019899,GO:0019900,GO:0019901,GO:0023051,GO:0023057,GO:0031090,GO:0031503,GO:0031965,GO:0031967,GO:0031975,GO:0033036,GO:0034613,GO:0042886,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045184,GO:0046907,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0050657,GO:0050658,GO:0050789,GO:0050794,GO:0051028,GO:0051168,GO:0051169,GO:0051179,GO:0051234,GO:0051236,GO:0051641,GO:0051649,GO:0060548,GO:0065007,GO:0070727,GO:0071166,GO:0071426,GO:0071427,GO:0071702,GO:0071704,GO:0071705,GO:1901099,GO:2001233,GO:2001234,GO:2001236,GO:2001237,GO:2001239,GO:2001240 |
| EggNOG free text desc. | zinc ion binding |
| EggNOG OGs | KOG4765@1,KOG4765@2759 |
| Ec32 ortholog description | Baculoviral inhibition of apoptosis protein repeat |
| Ec32 ortholog | Ec-21_006510.1 |
| EC | 2.1.1.56 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01000,ko03019 |
| Exons | 6 |
| Model size | 1598 |
| Cds size | 1419 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622932414.2799294-UTR-F-serratus_M_contig81:219305..219417 | 1622932414.2799294-UTR-F-serratus_M_contig81:219305..219417 | Fucus serratus male | UTR | F-serratus_M_contig81 219306..219417 - |
| 1690964297.2429533-UTR-F-serratus_M_contig81:219305..219417 | 1690964297.2429533-UTR-F-serratus_M_contig81:219305..219417 | Fucus serratus male | UTR | F-serratus_M_contig81 219306..219417 - |
| 1622932414.3991592-UTR-F-serratus_M_contig81:227766..227833 | 1622932414.3991592-UTR-F-serratus_M_contig81:227766..227833 | Fucus serratus male | UTR | F-serratus_M_contig81 227767..227833 - |
| 1690964297.3308523-UTR-F-serratus_M_contig81:227766..227833 | 1690964297.3308523-UTR-F-serratus_M_contig81:227766..227833 | Fucus serratus male | UTR | F-serratus_M_contig81 227767..227833 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622932414.2937346-CDS-F-serratus_M_contig81:219417..219474 | 1622932414.2937346-CDS-F-serratus_M_contig81:219417..219474 | Fucus serratus male | CDS | F-serratus_M_contig81 219418..219474 - |
| 1690964297.2647803-CDS-F-serratus_M_contig81:219417..219474 | 1690964297.2647803-CDS-F-serratus_M_contig81:219417..219474 | Fucus serratus male | CDS | F-serratus_M_contig81 219418..219474 - |
| 1622932414.3094087-CDS-F-serratus_M_contig81:219871..220017 | 1622932414.3094087-CDS-F-serratus_M_contig81:219871..220017 | Fucus serratus male | CDS | F-serratus_M_contig81 219872..220017 - |
| 1690964297.2754173-CDS-F-serratus_M_contig81:219871..220017 | 1690964297.2754173-CDS-F-serratus_M_contig81:219871..220017 | Fucus serratus male | CDS | F-serratus_M_contig81 219872..220017 - |
| 1622932414.3279905-CDS-F-serratus_M_contig81:220249..220972 | 1622932414.3279905-CDS-F-serratus_M_contig81:220249..220972 | Fucus serratus male | CDS | F-serratus_M_contig81 220250..220972 - |
| 1690964297.2833247-CDS-F-serratus_M_contig81:220249..220972 | 1690964297.2833247-CDS-F-serratus_M_contig81:220249..220972 | Fucus serratus male | CDS | F-serratus_M_contig81 220250..220972 - |
| 1622932414.347949-CDS-F-serratus_M_contig81:222052..222216 | 1622932414.347949-CDS-F-serratus_M_contig81:222052..222216 | Fucus serratus male | CDS | F-serratus_M_contig81 222053..222216 - |
| 1690964297.2916987-CDS-F-serratus_M_contig81:222052..222216 | 1690964297.2916987-CDS-F-serratus_M_contig81:222052..222216 | Fucus serratus male | CDS | F-serratus_M_contig81 222053..222216 - |
| 1622932414.3645136-CDS-F-serratus_M_contig81:226665..226825 | 1622932414.3645136-CDS-F-serratus_M_contig81:226665..226825 | Fucus serratus male | CDS | F-serratus_M_contig81 226666..226825 - |
| 1690964297.300327-CDS-F-serratus_M_contig81:226665..226825 | 1690964297.300327-CDS-F-serratus_M_contig81:226665..226825 | Fucus serratus male | CDS | F-serratus_M_contig81 226666..226825 - |
| 1622932414.3819492-CDS-F-serratus_M_contig81:227597..227766 | 1622932414.3819492-CDS-F-serratus_M_contig81:227597..227766 | Fucus serratus male | CDS | F-serratus_M_contig81 227598..227766 - |
| 1690964297.3103263-CDS-F-serratus_M_contig81:227597..227766 | 1690964297.3103263-CDS-F-serratus_M_contig81:227597..227766 | Fucus serratus male | CDS | F-serratus_M_contig81 227598..227766 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig81.19495.1 >prot_F-serratus_M_contig81.19495.1 ID=prot_F-serratus_M_contig81.19495.1|Name=mRNA_F-serratus_M_contig81.19495.1|organism=Fucus serratus male|type=polypeptide|length=473bp
MNFADDDLQERVEMTLARFDDAVKEMVNSTKTIVRHEHQPWNVSDNTVAD VGKQSQGIPNCRPWDYDDFTSRLQTFTPLMWFAKPSAASPLMCARHGWIN KGRDVLACSCCGKELHYKDKQDDKDVPFSSRLTSAHHALCPWNGNACPVE FLQLPVRTVDDLRTEFQLCLESLVHLVAAAALPELSLPSDFEEHCPGGLP HLAAKTRALVTNTPGDSAAPPVRTRTARDYKNDSKMSGENTEKWLSDENV GISALADTGDEVLGVAAAVVLFGWRLVPPPSSATISSSTSKVEVTKASNR VCCELCNRRVAVDNFLTLSVTATSQKSSEPDARSDIDEYRGLTTGASTSR SRSSTSPKAGGDGVERVESSKRRRLSGGGTPLKPMDLVAEHRSFCPWARV HPIQEDARGNDTEGTGVPGWRRSLDAVLFEEAALSATSQSPLDSRDRGDP PQNEAAVALQQVQKVLGVLTRY* back to topmRNA from alignment at F-serratus_M_contig81:219306..227833- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig81.19495.1 ID=mRNA_F-serratus_M_contig81.19495.1|Name=mRNA_F-serratus_M_contig81.19495.1|organism=Fucus serratus male|type=mRNA|length=8528bp|location=Sequence derived from alignment at F-serratus_M_contig81:219306..227833- (Fucus serratus male) CCTCCATCAGATCTGATTGTGTTTTCAAAGAAGATCCACTATAACGTGGT
CGTTCGACATACACTCAATGAATTTTGCTGACGATGACCTGCAGGAGAGG
GTTGAGATGACTCTGGCTCGGTTCGATGATGCCGTTAAGGAGATGGTCAA
TAGTACCAAGACCATAGTAAGACATGAGCACCAGCCGTGGAACGTTAGCG
ACAATACCGTGGCAGATGTCGGAAAGCAGTCACAAGGTGGGAATGGTAGG
TGCGAAAAGGAGTTCCGCGCCCTTACTAACAGGAGTGACGTGCTGATTGT
CAAACTCTTGCGATACAACATGTGGAGGGTCTGAATGTTTTTATATTTCG
CTTTGGACGACAGCACTGGCTTGTACGAACAAATACAATACAATATGGTA
TGGTTGTTCCCTATGTATCATACCTGTAGTTGCCAAGTATTTGTTGCCAA
AATCGTGTACTGTACTGTACAAAGGACTGTGCGTATACAAATACAGGTAC
CACAGGCATGTTGTCTAGAATTTCGTTTCATGGAAACTACAGCTTTGTTT
TATACCCGATACTTGGGAGCTGTGCAGTACCTTTATTATTAATAGTAGAT
CTAGAGTTTAAGTTACATAAGTCGATCGGGAGCTGCTAGCTGCTAGCTAC
GCCAGAGTGTATGTACCCGCTTTACGAATAATGCCGATCCATCCATCCAT
CCAGCCGGCAGGACTGTCGAGCTGTTACTTTTTGGGACTACCAGGTATTA
TTATAATATTGTACGAGGGATAACCTGTGCTGTAAAATGAAAGGCACTGG
CCGTCTAGACGGTAGTACTGTACAAATAACATAGTATACTCGTAGTAGCC
AACTTTGTATAACATTGTATAAATTCGCCGTTTACTCAGCTGAGCAATGC
AAGATAGGCACAATTGTCTCTGATGTCTCTGATACCTCTGATGTGCCATC
GTAGAGTTATTTGTCTGGTGCATGTGTCTGACGCTTGCGATCAACCCCTT
CGTTAAAGGTATACCAAACTGCCGGCCGTGGGACTACGACGACTTCACGT
CCCGACTGCAAACCTTCACACCGTTGATGTGGTTCGCCAAACCCTCTGCC
GCCTCACCACTCATGTGCGCGCGCCATGGGTGGATCAATAAAGGAAGAGA
CGTTTTGGCTTGTTCGTGGTGAGAATGCGCTTACAAAAGCTTTTCGGTAG
AGTTAGTCAAATCGTTAGCAAACGCAGTCAGCTGTCGTCTTTGTTGTTTG
CGGTACCACAAGAGATATCAGAGACAGCAGAGACATCGCAGCCTCAGCTT
AGTTCATAGTTCATAGCGATAGCGCGGCAACAAGAGATATCAAAAACAGT
ACCCGCCTTATTCTTATTTCCCCGTTTTGTTTTTATCATTATTCAACCGT
AGTTCAAGAGGGCAAAAAACGAAGGTACGGTTACGGTTGTACCTGGTACA
GTATATTGTACCTGGTACAGTACAGTACAGTATAATAGAAGCTGGATATA
AAAGCTGTATGCCGCGGCCGATGACAAAGAAAGCCTGTACGACTCATTCG
TGCATGAACTGCATTATATGATATGATATGATATGATCTGATATGATGAG
ATATTTTATGCATGCCACGTGCGTTACAGCGAGGAACCGTACCTTGGACA
CCAAATCAGACGCAGCTATTGTATGATATTTGTTTTGTCTGCACTCAAGC
GCAGTGAGCTTTAGGGTCGTCCAGTCCAACTCTTGATATTAGGACAAACG
CAGCACGAGTGCAGTGCACCAGTATGATCGTGTCAGCACACGAGTAGTCT
ATCCGTTTGGGAGAAAAGTCATCATCTCATCGTGGTGCTGGTACCTCTGC
ACTTAAATCCTATTAATAGTGTAAAATAGCCACGAGTTCTCCTGCCAGGG
TCGGAGTGAGAAAATATATGAAATAAAAGGCGATTTCCTGAGGGCTGTAA
AGACTGCACGGCTCATGCATTTTTCTTTTAAATCACGCGTCGAGATATCC
CATGATAGATGCGCCATGGCCTTTTAAACCTTGGACCAAGTCCGCGGCAG
CACCCAACTCCAAGCTATCGTGTGGACAGACATACAGCTATTAATACAAA
CAGCTGTTAAAATGAAACTGAAAGCGCCACCGTTCCTGAAACTGAGAGCA
TTTGCTATTAATACTTTATTTGTATCACCAGGTGGTCGGCCGAGTAGCAG
TGCTGCCGGAAACCGCCTGACTAATACTATAGGAAACCACACATTTGTCC
CTCGCGCACGTTATCTCAGACTGCTTCGATGCAGAAGGAGGTACGAACTG
CTGTATCACTCTGTGTTGCGTTTGTGCTCCGAGTTTCGTGAGTCGAAATC
GTTTCTGTGGCTCAATATCAAATAAAGTATCCACGGCAAAAGTTCATGAA
TACAAAAAATGCGGCGAGATCAGGTACGTACCCCATTGCCTCGTGTATGT
ATTAAAATATCCCGACTTCGGTCGTCAAGCAGTCCCTCGCACGCCCGTCG
TTCGATACGACAAAGGTGTGAACACATTTTCCGGGTATGTTGGCGGCAGT
GTGCGAAAGGTTCGTCGCGGATAGGAGCTTGTCCGCGACGAATCGTTACC
TTCACCTCCCTTACGAATAACCATATGTTGGCTGAAAACGGCTTCAGACC
AGAATTTGTACAAACACATACACCTTTTCCAAAAGATCTCTTGTCTTGAA
TTTAAAGTAAGATTCCAGGTACGTACGATGATCATACGCACACACCATTT
TGTGATGACCGACAGAGATGTCGCAGTACCACGGAAACAGCTGTCGACTC
AACCTCGACGAAGAACATAGTGCATAGTGTCTTCTACGAAAATTGTCTCT
CGGGATATGTGTCCTGCCGATCGGGTACTTGTGTTTCAAAATTAAGGTGT
GGTCTCAGTCCCGAGTAAGAACGCGTTGTACAGGCGGCGGGAAGGTAGGA
AAAATGACTCTCTAACCAACAGTAGCTTAGACTAACAAAAAAACGCAACG
AAATTGTTATCCTTACGTCGGGACCTGTGATGTCTCCGTGCCTCCGCGGT
CCGGTCGGCTGTCAGGTAGCTCCAGTGTGCAGCTTCTGCTGCAGTCCGGG
TCTAATAGAAGATGCCATCCCTTTTTGATTTTTTAAACTACCCCCAATCC
GACCACCGCCTCCACATTATTGCAACCCGGCAGCACTGGTAGACTTGTGG
TAACCTCGCAGAACACTAATTAAGTAAGTAATACTAGTAAGTAATAGTGT
GGAGGTCGTGAGTTCGATTATTCACTAATAATACTGAAGTATATTAGAAT
TTGAATTCTGTCTTCCGTATCATAGCGAAAAACATGAGAACGTGAAGAAG
TAAAGTTCAACCATATTACAACCATATTACATTGATTGCATTGATTGGTT
GACGAGGTGCATAGAGTGTTGAACTTGCATCGCGATAAAAAATCGCAGGC
GAGAACCGGGGAGATATGGGAAGATCCTTAGCGACCGCGGGCAGAATGGA
GGATGGCAACGTTGCAGTACGTGAGATTGGTAACCTAGCATAGCATAGCA
TAGCACGTCGAGTGGTGAGGCCCATCGGCCGTAAGTGAGATTGAGATACA
AAAAAAAATAACGGCCCAATGGCGCCCTGCTTTATGTTTCCGTTAAATAC
TACAATTCAGTGTGTAGTTGAGCTCAAGAGTAATGTAGCAGCTGTGTACC
GTGTTAATGTAGACTTCGCAGCTATCTGTATTAATAATTATAGCACAATT
TTACTTTTTTGCAGTTTGCAGTTTGCAGTTCAATTATTGTAAGTCGCGAA
AGCGCGTAGAACTTGTGTCATATTCGCCTTGGGGTATACCGTAGTAATAT
CAATCTTTATCTTTATCTTATACAGGTACAGATAATGCATTTTATTTTGC
CATTTCCGCTGGAAAGCTGAAACGGTCATAGTCTATAGCCTAATATAGCT
ATTCACGCGCAGGCAAGTACCGAATAGCCTTCTTCACCTCAGAAACAGAC
GACATGACAGCCTCAATTTGTGCGGCGATAGGCTATAGATGGTCAGCGTG
CATAGTCGCGATCGGTACGCGATTCCTTTTTTTTTATTGGCTTCAAGTTC
AAACATTCACACTACACGAGCCTCAAGCCTGGACTTTTTGGCGTGGTCGT
ACTCGATTGGCAAATAGTACAATCTCACTATTTTTTGGGACATCTCCACC
TGACCTCGAATCTGCTCCAAAAGTTGACTGTAGGTTTCACTGTAGGTGTT
GGTTCACGAAGAGCTAGGATAGTTAGCTAGGATAGTATAGTTCCATGCCT
TGAACGAACGAAAGCGACAAACATATTTGGGACATGCACCACTTATTTAT
TAAAAGTTGCATCTGGAAGTCTCACTATCTCGCTGGAAGTGAGTTTCCGC
CGGATAAATTTGTTGTACAGGTATGGGGTGATTTTTGTACCTTTTAGCGT
CGCAAGCCTCCATATCGACCCTAATTTTAGCGTCGACAATGTTACGCGAA
AGGTACAGCACTCTTTGCACTACTGTATTCAACTATAGTACTCTATTAGT
ACTCTATGATACTGGTACACCTTAAACGTTTTCAAGGTTATACTACGTAG
TAATACATTTATGAAGGCAAACGATTGGCCGGCTGATATTTGCATGCTGT
TGGAGAGGAACAAAGGGCAGTACTTGGGAGCACTCAAAAAAAGTGAGTTT
TCACGACTACAGTATAATACTATAATAGCTCAGCACATCGTGGCAGAGTC
TCGTATCGTATCAACGGTTGATGATTGCGAAAAAAATCTGCTGAAGGAAT
CCTGACATGTCAAAACAAGCGTAAGTTTCTGGTCGGTTGTAAAGCTTTTG
TATATATTTGAAAAGAAGAAGAGCTGGTTTGACATGTCAGATAAAAATAA
CTAAAGAGCGGAATTCTTATTTCAAAAGTTGTAACGTATGTCACATTTTG
GAACCAAGGGCGTCGCGTAGGGCGTGGTGGTTGCGAATATTGCGACTTTT
TTTTATTTCTGTAACTTCTCGACCCCGGTAGCTCAGTAGGCACCTCGTAA
CCTTCTGACACGTTGGGACGTGAGTTCGATCCCGGCAAACGGGATTTTTC
TCACTAAAAACTAAAAAACCAAAATAAAAATGCCCAACGGGTGGAGAACG
ATTAATTCGTTAGTACACAAAATTCGACTTCACGGTCGACGAGGGAAAGG
AATGGCTGAATCCTTCTCGCGACAAAAATCAAGGCACGCACCGCAGAAGG
AAGGTGGATGAAAAATCCTGTGTGACCTTCCTCCTGTGTGACCCCGGCTG
GTACGTCCAACGAACTTGATGTCCAGAATGGATGGGAAGAAAACACACAG
AAAACACTTCCCAGCGACTCTCTATTTATAGCTATAGTATATATAGTATA
CTGTACTTAGGGTGCGATTTCTTTTGCGCTTTTCTGAGGGCATGGTCGAG
TAGTATTAATATTAATATTACTATTAATAGTAGGATATGATAGGATAGGA
TAGGATAGGATAGGATATTGAGCACGGTGATGCTGTATCTGCAATATATT
GATATTGGTGCAATCTCACGTTGCCCCGACCTCCCTTGCTTTCCTCTCTT
GCAACCTTCTCTCTCAGCTGCGGTAAGGAGCTGCACTATAAAGACAAACA
AGACGACAAGGACGTCCCGTTTTCATCTCGGCTGACATCCGCCCACCACG
CGCTCTGCCCTTGGAATGGAAACGCCTGCCCTGTGGAGTTCCTACAGCTT
CCTGTGAGGACTGTCGATGACCTACGCACTGGTGAGGTCGGGCTTCGTTT
TGCCATCTTTTCTGCTCATGATTTTTGTAGACCATGTCCATCATTCCTCG
TTTATACAAACCATGTCCACCATATAGTCTACTCGTTTTTTCGCTTTGAT
TGTTCGAAGTTAAGCCGCGGCCCTTCGTTCGATCGTTCTTCGATACGCAT
GCGTCCCGGCAGCCACACGAAGTTCGCTACCGTATTAATAACGACTACCA
GTATAATATTGTACTGTAGACTATTCTAACTCCTATCTAACTCCTACTGG
TATGGTATTGGTTAGTGTCCCTTTTCTCGAGTATTGGTTTTTGTCCCATT
GCTATCATTGCTATCTCCTCTTATGGAAGGTCCTGATTTGATACCTTGTA
CGAGATGTTTTTCTACCTCATGACCACGGGCTGAATTTTGACGTCAGTTT
ATGTGAGATTTCAATCATGAATCAATATAAACGTCGGAATCCCGTAAGTA
AGCACCAGATTCAGCCTGAGTATGGAGATGAGCAGGCTGACGCGGAACGG
GACTGCCGAAACCGTCTCGCGAGACCGAATTCTCAGGCGCGAACGCGGAC
AGGGGAATATCATTTTCCCTGTTGATCTCCACGAACAGGATTGGCAACCT
TACCCGGTTGATCCATATTCTTGCTATATGTGTGACCATACATAAACGTT
ATGGAAACAGCAACAACACATCCAGAAACGGATTTTACAGGGTTTTACAA
GCACTTGTTTTTTTGTTTCCAAATGGACGGAGGGGAAAGGAAGGCATCGA
AACTTACTCTTAGACTCTCATACCCACTGCACTTGTGTCAACTAAAGGCT
GTTGGGTTATTATGATGCACGTGGCTATGATGCCGTTGCGATAAACACTA
AGGGTGATGATGCACATGGTCGTTTATGCTCATCGAAGTCATGTCAGCTC
TTTAGCGTTCTGACGCACGCGAGTCCACGATTGCAGGTGCTATCTGTAGT
CACAGCACGAGATTTAACTGTGAAACATATATAGGTATATTAGCTTCTTT
TGTAAAGCGGACAGCGTCTCAGCTGCCAGTGCCCCTTTGCTGTCTTTCTG
CACCCCCGAAGAGTTCCAGTTATGCCTGGAAAGTCTGGTCCATCTCGTTG
CGGCGGCAGCGCTGCCCGAGCTGAGTCTACCGAGCGACTTCGAAGAGCAC
TGCCCGGGCGGCTTACCGCATCTTGCGGCCAAAACACGGGCGCTGGTAAC
GAACACCCCCGGAGATAGTGCGGCCCCGCCTGTCCGTACGAGAACCGCCC
GAGACTATAAAAATGATTCGAAAATGTCGGGGGAAAATACGGAGAAGTGG
CTGAGTGATGAGAACGTTGGAATCAGCGCCCTGGCCGACACGGGAGACGA
GGTTTTGGGTGTTGCTGCTGCAGTTGTGTTGTTCGGATGGCGTCTGGTAC
CGCCACCGTCGTCGGCAACGATATCCTCCTCGACATCCAAAGTCGAAGTC
ACGAAGGCTTCCAACAGGGTGTGCTGTGAGTTGTGCAACCGGCGCGTGGC
GGTGGACAATTTCTTGACGTTGAGTGTTACAGCAACGTCTCAAAAAAGCT
CGGAACCTGATGCACGAAGCGACATCGATGAATACAGAGGCTTAACGACG
GGAGCATCAACATCAAGATCAAGATCGAGCACAAGTCCGAAGGCGGGCGG
AGATGGAGTTGAAAGAGTTGAAAGCAGTAAACGTCGGCGCTTGTCGGGGG
GAGGCACGCCCCTAAAACCGATGGATCTCGTGGCGGAACACCGATCTTTC
TGCCCGTGGGCGAGGGTTCATCCGATTCAAGAAGGTATTAAAGATATTCT
GACCTGGATCGTGGCGCTATTTTACAGCTTTTGTGGTGTGTTAGCGTTGG
CTCCTGAGGGGCTTTTCCCTGCTACTTACACAACGCCGCTGATGCCTGGT
TATCTTTCCTCGGCTCGCGTTTCGAACACCCCTTTGCCGACTTTTGAACC
TTTACCCTAACTCATTTCGAGGGCGAACCGTTCTCACTTCTTGCCATCCA
TAAACCCTAACCCAAGACGCAAGGGGTAATGATACGGAGGGGACTGGCGT
GCCAGGGTGGCGTCGATCGCTTGATGCAGTATTGTTCGAAGAAGCGGCTC
TGTCGGCAACATCACAATCACCGTTGGATTCGAGGGATCGCGGTGATCCC
CCACAAAATGAGGTGTGACCAAACGCAGAACTCTCTTTGTAGTCTAGAGC
TTTATTGTCAGGTAGTAAGAGCAAGAGGAGCAAGAGGCGGCCGTACCGAA
AATATTGTAAACTGTAGTACTGTACAGTACATCCAGTATTCGCGGATCAT
GACGTTGACTATATGACTATTACTATTAATAGTATAACCGTATCATACCT
CCAAATCGTCAAATAGTTACCAGTATTTATTATACTCCTAGTATTTTCGC
AAACAAGAGAGAAAGTCGATCTTCAGCCTTTACAAATCCATCAAGATATT
ACGAATGGTCCCATTATCCATTTTTTTTATACCGTACCGTTCATATATTA
CCGTCATTCATACATTACCGTCATTATGCCTCGTGATGCCGGCTTACATG
TCTCCCCAGGCGGCAGTAGCCCTACAGCAAGTGCAAAAGGTTTTGGGTGT
CCTGACGCGCTACTGATGCTTCAAGACACAATAGACTAAGCGATACTGAT
GCTTTGCCTAGACTAAGCGCTTTGCTATTGCAGATGAGTACTTGAGTTAT
AATAATACTTCGCTGGAGATAGATATTC back to topCoding sequence (CDS) from alignment at F-serratus_M_contig81:219306..227833- >mRNA_F-serratus_M_contig81.19495.1 ID=mRNA_F-serratus_M_contig81.19495.1|Name=mRNA_F-serratus_M_contig81.19495.1|organism=Fucus serratus male|type=CDS|length=2838bp|location=Sequence derived from alignment at F-serratus_M_contig81:219306..227833- (Fucus serratus male) ATGAATTTTGCTGACGATGACCTGCAGGAGAGGGTTGAGATGACTCTGGC TCGGTTCGATGATGCCGTTAAGGAGATGGTCAATAGTACCAAGACCATAG TAAGACATGAGCACCAGCCGTGGAACGTTAGCGACAATACCGTGGCAGAT GTCGGAAAGCAGTCACAAGATGAATTTTGCTGACGATGACCTGCAGGAGA GGGTTGAGATGACTCTGGCTCGGTTCGATGATGCCGTTAAGGAGATGGTC AATAGTACCAAGACCATAGTAAGACATGAGCACCAGCCGTGGAACGTTAG CGACAATACCGTGGCAGATGTCGGAAAGCAGTCACAAGGTATACCAAACT GCCGGCCGTGGGACTACGACGACTTCACGTCCCGACTGCAAACCTTCACA CCGTTGATGTGGTTCGCCAAACCCTCTGCCGCCTCACCACTCATGTGCGC GCGCCATGGGTGGATCAATAAAGGAAGAGACGTTTTGGCTTGTTCGTGGT ATACCAAACTGCCGGCCGTGGGACTACGACGACTTCACGTCCCGACTGCA AACCTTCACACCGTTGATGTGGTTCGCCAAACCCTCTGCCGCCTCACCAC TCATGTGCGCGCGCCATGGGTGGATCAATAAAGGAAGAGACGTTTTGGCT TGTTCGTGCTGCGGTAAGGAGCTGCACTATAAAGACAAACAAGACGACAA GGACGTCCCGTTTTCATCTCGGCTGACATCCGCCCACCACGCGCTCTGCC CTTGGAATGGAAACGCCTGCCCTGTGGAGTTCCTACAGCTTCCTGTGAGG ACTGTCGATGACCTACGCACTGCTGCGGTAAGGAGCTGCACTATAAAGAC AAACAAGACGACAAGGACGTCCCGTTTTCATCTCGGCTGACATCCGCCCA CCACGCGCTCTGCCCTTGGAATGGAAACGCCTGCCCTGTGGAGTTCCTAC AGCTTCCTGTGAGGACTGTCGATGACCTACGCACTGAGTTCCAGTTATGC CTGGAAAGTCTGGTCCATCTCGTTGCGGCGGCAGCGCTGCCCGAGCTGAG TCTACCGAGCGACTTCGAAGAGCACTGCCCGGGCGGCTTACCGCATCTTG CGGCCAAAACACGGGCGCTGGTAACGAACACCCCCGGAGATAGTGCGGCC CCGCCTGTCCGTACGAGAACCGCCCGAGACTATAAAAATGATTCGAAAAT GTCGGGGGAAAATACGGAGAAGTGGCTGAGTGATGAGAACGTTGGAATCA GCGCCCTGGCCGACACGGGAGACGAGGTTTTGGGTGTTGCTGCTGCAGTT GTGTTGTTCGGATGGCGTCTGGTACCGCCACCGTCGTCGGCAACGATATC CTCCTCGACATCCAAAGTCGAAGTCACGAAGGCTTCCAACAGGGTGTGCT GTGAGTTGTGCAACCGGCGCGTGGCGGTGGACAATTTCTTGACGTTGAGT GTTACAGCAACGTCTCAAAAAAGCTCGGAACCTGATGCACGAAGCGACAT CGATGAATACAGAGGCTTAACGACGGGAGCATCAACATCAAGATCAAGAT CGAGCACAAGTCCGAAGGCGGGCGGAGATGGAGTTGAAAGAGTTGAAAGC AGTAAACGTCGGCGCTTGTCGGGGGGAGGCACGCCCCTAAAACCGATGGA TCTCGTGGCGGAACACCGATCTTTCTGCCCGTGGGCGAGGGTTCATCCGA TTCAAGAAGAGTTCCAGTTATGCCTGGAAAGTCTGGTCCATCTCGTTGCG GCGGCAGCGCTGCCCGAGCTGAGTCTACCGAGCGACTTCGAAGAGCACTG CCCGGGCGGCTTACCGCATCTTGCGGCCAAAACACGGGCGCTGGTAACGA ACACCCCCGGAGATAGTGCGGCCCCGCCTGTCCGTACGAGAACCGCCCGA GACTATAAAAATGATTCGAAAATGTCGGGGGAAAATACGGAGAAGTGGCT GAGTGATGAGAACGTTGGAATCAGCGCCCTGGCCGACACGGGAGACGAGG TTTTGGGTGTTGCTGCTGCAGTTGTGTTGTTCGGATGGCGTCTGGTACCG CCACCGTCGTCGGCAACGATATCCTCCTCGACATCCAAAGTCGAAGTCAC GAAGGCTTCCAACAGGGTGTGCTGTGAGTTGTGCAACCGGCGCGTGGCGG TGGACAATTTCTTGACGTTGAGTGTTACAGCAACGTCTCAAAAAAGCTCG GAACCTGATGCACGAAGCGACATCGATGAATACAGAGGCTTAACGACGGG AGCATCAACATCAAGATCAAGATCGAGCACAAGTCCGAAGGCGGGCGGAG ATGGAGTTGAAAGAGTTGAAAGCAGTAAACGTCGGCGCTTGTCGGGGGGA GGCACGCCCCTAAAACCGATGGATCTCGTGGCGGAACACCGATCTTTCTG CCCGTGGGCGAGGGTTCATCCGATTCAAGAAGACGCAAGGGGTAATGATA CGGAGGGGACTGGCGTGCCAGGGTGGCGTCGATCGCTTGATGCAGTATTG TTCGAAGAAGCGGCTCTGTCGGCAACATCACAATCACCGTTGGATTCGAG GGATCGCGGTGATCCCCCACAAAATGAGACGCAAGGGGTAATGATACGGA GGGGACTGGCGTGCCAGGGTGGCGTCGATCGCTTGATGCAGTATTGTTCG AAGAAGCGGCTCTGTCGGCAACATCACAATCACCGTTGGATTCGAGGGAT CGCGGTGATCCCCCACAAAATGAGGCGGCAGTAGCCCTACAGCAAGTGCA AAAGGTTTTGGGTGTCCTGACGCGCTACTGAGCGGCAGTAGCCCTACAGC AAGTGCAAAAGGTTTTGGGTGTCCTGACGCGCTACTGA back to top
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