mRNA_F-serratus_M_contig81.19507.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig81.19507.1
Unique NamemRNA_F-serratus_M_contig81.19507.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig81.19507.1 vs. uniprot
Match: D8LF15_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF15_ECTSI)

HSP 1 Score: 147 bits (371), Expect = 5.200e-40
Identity = 74/95 (77.89%), Postives = 85/95 (89.47%), Query Frame = 1 
Query:    1 MSEKRRRSSLLQDLVNKRA-EDKAQTASVDSSPWRLASFGVLDLLQKLVEQDRVDVNAKDERGVSPIIWATRSGHEEVAAYLLDKGADVESYGYA 282
            MSEKRRRSSLLQDLVNKRA E + Q A++DS PWRLASFGV+DLL+KLVE+  +DVNAKD+RG+ PIIWA RSGHEEVA YLLDKGAD+ES+GYA
Sbjct:    1 MSEKRRRSSLLQDLVNKRASEGEEQAANIDSDPWRLASFGVIDLLKKLVEEGGIDVNAKDDRGMPPIIWAIRSGHEEVATYLLDKGADMESFGYA 95
[Close]
BLAST of mRNA_F-serratus_M_contig81.19507.1 vs. uniprot
Match: A0A2R5GNV3_9STRA (Ankyrin repeat domain-containing protein 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GNV3_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 1.920e-19
Identity = 42/90 (46.67%), Postives = 62/90 (68.89%), Query Frame = 1 
Query:   40 LVNKRAEDKAQTASVDSSPWRLASFGVLDLLQKLVEQDR--VDVNAKDERGVSPIIWATRSGHEEVAAYLLDKGADVESYGYAGMRALHH 303
            +  K+  DK Q   ++S+PW+LA  G +  L+ LVE+++  VDVNA+D+ G  PIIWA RSG+ +   YL+++G D+ES G+ GMR LHH
Sbjct:    1 MSKKKGGDKDQVPEIESNPWKLAGIGDVAALKGLVEREKDPVDVNAEDDYGCQPIIWAARSGYVDAVTYLVEQGGDIESSGFGGMRPLHH 90
[Close]
BLAST of mRNA_F-serratus_M_contig81.19507.1 vs. uniprot
Match: A0A6S9F9Q9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9F9Q9_HETAK)

HSP 1 Score: 92.0 bits (227), Expect = 7.360e-19
Identity = 47/96 (48.96%), Postives = 65/96 (67.71%), Query Frame = 1 
Query:   16 RRSSLLQDLVNKRAEDKAQTASVDSSPWRLASFGVLDLLQKLVEQDRVDVNAKDERGVSPIIWATRSGHEEVAAYLLDKGADVESYGYAGMRALHH 303
            RR S+L D+      +K Q A +D+ P RLA+ G+LDLL+K  E    +VNA D+RG +P+IWA R+GH EV  YL++ G DVE  GY GM+++HH
Sbjct:    6 RRKSVLDDV------EKTQ-ADIDNQPHRLAANGILDLLKKYFEAHEDEVNAVDDRGCTPLIWAARNGHIEVVKYLVEVGGDVEMGGYGGMKSIHH 94
[Close]
BLAST of mRNA_F-serratus_M_contig81.19507.1 vs. uniprot
Match: A0A7S2V3X0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3X0_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 9.110e-18
Identity = 39/90 (43.33%), Postives = 63/90 (70.00%), Query Frame = 1 
Query:   40 LVNKRAE--DKAQTASVDSSPWRLASFGVLDLLQKLVEQDRVDVNAKDERGVSPIIWATRSGHEEVAAYLLDKGADVESYGYAGMRALHH 303
            +  K+AE  ++ + A++DS P+RLA+FG++DLL+K   ++  ++N  D+ G + ++WA R+GH  VA YL+D GAD+E   Y GMR +HH
Sbjct:    1 MGKKKAEVKEEPEAAAIDSDPFRLAAFGIIDLLKKYFGENMEEINQTDKLGCTALVWACRNGHLSVAEYLVDCGADIEHSSYGGMRPIHH 90
[Close]
BLAST of mRNA_F-serratus_M_contig81.19507.1 vs. uniprot
Match: A0A7S2D3I5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D3I5_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 1.510e-11
Identity = 31/64 (48.44%), Postives = 49/64 (76.56%), Query Frame = 1 
Query:   55 AEDKAQTASVDSSPWRLASFGVLDLLQKLVEQDRVDVNAKDERGVSPIIWATRSGHEEVAAYLL 246
            AE   + A+VDS   +LA+FG+LD+L+KLVE++  DVN+ D++  +P+IWA R+GH++V  YL+
Sbjct:    2 AEGGVEVATVDSDIHKLAAFGILDILKKLVEEEGADVNSLDDQKCAPLIWAIRNGHKDVTKYLI 65
[Close]
BLAST of mRNA_F-serratus_M_contig81.19507.1 vs. uniprot
Match: A0A836CKL3_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKL3_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 2.230e-11
Identity = 47/122 (38.52%), Postives = 69/122 (56.56%), Query Frame = 1 
Query:   13 RRRSSLLQDLVNKR-AEDKAQTASVDSSPWRLASFGVLDLLQKLVEQDRVDVNAKDERGVSPIIWAT---------------------RSG-HEEVAAYLLDKGADVE--SYGYAGMRALHH 303
            RRRSS+L  +  KR + D ++ A+VDS PWRLASFG++DLL+  +E+    V+  D+RG++P++W                       RSG HE V + LL++GA V+  S    G  ALH+
Sbjct:    3 RRRSSVLDMMKEKRRSADASRVAAVDSDPWRLASFGMVDLLKVQMEKKGAQVDQVDQRGMTPLLWGEFDADNMVDAVCRVWSRMTPPLRSGSHEAVVSLLLERGASVDGGSVDEMGNGALHY 124
[Close]
BLAST of mRNA_F-serratus_M_contig81.19507.1 vs. uniprot
Match: Q0J744_ORYSJ (Os08g0233400 protein n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q0J744_ORYSJ)

HSP 1 Score: 54.3 bits (129), Expect = 1.470e-5
Identity = 32/91 (35.16%), Postives = 47/91 (51.65%), Query Frame = 1 
Query:   37 DLVNKRAEDKAQTASVDSSPWRL---ASFGVLDLLQKLVEQDRVDVNAKDERGVSPIIWATRSGHEEVAAYLLDKGADVESYGYAGMRALH 300
            D V  R ++  + A  D   W L   A    L++ + LVE  RVDVNA D+ G +P+++A    +  +  YLLD GAD +     G+  LH
Sbjct:   45 DKVRGRLQEVVEAARTDGGIWALQLAAGNEQLEVCRYLVEGLRVDVNAADDEGRTPLVFAVIGENAAIVKYLLDHGADPDKADDDGLTPLH 135
[Close]
BLAST of mRNA_F-serratus_M_contig81.19507.1 vs. uniprot
Match: A0A4Y7RV97_9FIRM (Phosphocholine transferase AnkX n=2 Tax=Eubacteriales TaxID=186802 RepID=A0A4Y7RV97_9FIRM)

HSP 1 Score: 55.5 bits (132), Expect = 1.840e-5
Identity = 27/56 (48.21%), Postives = 38/56 (67.86%), Query Frame = 1 
Query:  130 LQKLVEQDRVDVNAKDERGVSPIIWATRSGHEEVAAYLLDKGADVESYGYAGMRAL 297
            ++ LVE+  +DVN +DE G+SP+I+A   GH EV   LLD GADV + G +G+  L
Sbjct:   19 IKYLVEEKGMDVNVRDENGMSPLIYAAFFGHAEVVKTLLDCGADVNTRGNSGVTVL 74
[Close]
BLAST of mRNA_F-serratus_M_contig81.19507.1 vs. uniprot
Match: A0A830DM67_9LAMI (Histone-lysine n-methyltransferase ehmt1 n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830DM67_9LAMI)

HSP 1 Score: 53.5 bits (127), Expect = 3.440e-5
Identity = 28/95 (29.47%), Postives = 50/95 (52.63%), Query Frame = 1 
Query:   28 LLQDLVNKRAEDKAQTASVDSSPWRLASF----GVLDLLQKLVEQDRVDVNAKDERGVSPIIWATRSGHEEVAAYLLDKGADVESYGYAGMRALH 300
            LL+DL N+    K + A+  +       F    G + + +  +E+ +++++ K E+G S +++A R G    A Y + +GADV   GY G+  LH
Sbjct:   24 LLRDLRNEAFRRKCERAAARAEGLTCLHFAAERGYIKIYRFFIEEVKINIDLKSEKGESTMLFAARKGQFSAAKYFITRGADVRMSGYQGITCLH 118
[Close]
BLAST of mRNA_F-serratus_M_contig81.19507.1 vs. uniprot
Match: B9FZQ7_ORYSJ (Uncharacterized protein n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=B9FZQ7_ORYSJ)

HSP 1 Score: 54.3 bits (129), Expect = 5.250e-5
Identity = 32/91 (35.16%), Postives = 47/91 (51.65%), Query Frame = 1 
Query:   37 DLVNKRAEDKAQTASVDSSPWRL---ASFGVLDLLQKLVEQDRVDVNAKDERGVSPIIWATRSGHEEVAAYLLDKGADVESYGYAGMRALH 300
            D V  R ++  + A  D   W L   A    L++ + LVE  RVDVNA D+ G +P+++A    +  +  YLLD GAD +     G+  LH
Sbjct:   22 DKVRGRLQEVVEAARTDGGIWALQLAAGNEQLEVCRYLVEGLRVDVNAADDEGRTPLVFAVIGENAAIVKYLLDHGADPDKADDDGLTPLH 112
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig81.19507.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D8LF15_ECTSI5.200e-4077.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2R5GNV3_9STRA1.920e-1946.67Ankyrin repeat domain-containing protein 1 n=1 Tax... [more]
A0A6S9F9Q9_HETAK7.360e-1948.96Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2V3X0_9STRA9.110e-1843.33Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S2D3I5_9STRA1.510e-1148.44Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A836CKL3_9STRA2.230e-1138.52Ankyrin repeat-containing domain protein n=1 Tax=T... [more]
Q0J744_ORYSJ1.470e-535.16Os08g0233400 protein n=1 Tax=Oryza sativa subsp. j... [more]
A0A4Y7RV97_9FIRM1.840e-548.21Phosphocholine transferase AnkX n=2 Tax=Eubacteria... [more]
A0A830DM67_9LAMI3.440e-529.47Histone-lysine n-methyltransferase ehmt1 n=1 Tax=P... [more]
B9FZQ7_ORYSJ5.250e-535.16Uncharacterized protein n=1 Tax=Oryza sativa subsp... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig81contigF-serratus_M_contig81:750072..754852 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score148.3
Seed ortholog evalue4.7e-33
Seed eggNOG ortholog2880.D8LF15
Hectar predicted targeting categoryother localisation
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
Ec32 ortholog descriptionAnkyrin-repeat protein
Ec32 orthologEc-21_006340.1
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size732
Cds size732
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig81.19507.1prot_F-serratus_M_contig81.19507.1Fucus serratus malepolypeptideF-serratus_M_contig81 750072..754852 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932413.1402338-CDS-F-serratus_M_contig81:750071..7502581622932413.1402338-CDS-F-serratus_M_contig81:750071..750258Fucus serratus maleCDSF-serratus_M_contig81 750072..750258 -
1690964296.676276-CDS-F-serratus_M_contig81:750071..7502581690964296.676276-CDS-F-serratus_M_contig81:750071..750258Fucus serratus maleCDSF-serratus_M_contig81 750072..750258 -
1622932413.1574616-CDS-F-serratus_M_contig81:750533..7506961622932413.1574616-CDS-F-serratus_M_contig81:750533..750696Fucus serratus maleCDSF-serratus_M_contig81 750534..750696 -
1690964296.6883407-CDS-F-serratus_M_contig81:750533..7506961690964296.6883407-CDS-F-serratus_M_contig81:750533..750696Fucus serratus maleCDSF-serratus_M_contig81 750534..750696 -
1622932413.177845-CDS-F-serratus_M_contig81:753689..7538591622932413.177845-CDS-F-serratus_M_contig81:753689..753859Fucus serratus maleCDSF-serratus_M_contig81 753690..753859 -
1690964296.7018125-CDS-F-serratus_M_contig81:753689..7538591690964296.7018125-CDS-F-serratus_M_contig81:753689..753859Fucus serratus maleCDSF-serratus_M_contig81 753690..753859 -
1622932413.1964452-CDS-F-serratus_M_contig81:754198..7543381622932413.1964452-CDS-F-serratus_M_contig81:754198..754338Fucus serratus maleCDSF-serratus_M_contig81 754199..754338 -
1690964296.7119415-CDS-F-serratus_M_contig81:754198..7543381690964296.7119415-CDS-F-serratus_M_contig81:754198..754338Fucus serratus maleCDSF-serratus_M_contig81 754199..754338 -
1622932413.2215383-CDS-F-serratus_M_contig81:754780..7548521622932413.2215383-CDS-F-serratus_M_contig81:754780..754852Fucus serratus maleCDSF-serratus_M_contig81 754781..754852 -
1690964296.725128-CDS-F-serratus_M_contig81:754780..7548521690964296.725128-CDS-F-serratus_M_contig81:754780..754852Fucus serratus maleCDSF-serratus_M_contig81 754781..754852 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig81.19507.1

>prot_F-serratus_M_contig81.19507.1 ID=prot_F-serratus_M_contig81.19507.1|Name=mRNA_F-serratus_M_contig81.19507.1|organism=Fucus serratus male|type=polypeptide|length=244bp
MSEKRRRSSLLQDLVNKRAEDKAQTASVDSSPWRLASFGVLDLLQKLVEQ
DRVDVNAKDERGVSPIIWATRSGHEEVAAYLLDKGADVESYGYAGMRALH
HACSNSHEGCIALLLNKGADPNAVDEFGNSPLHYAACRGVLNIIMRLLAN
GAEPDLANIQGSTPLHKACVFGQNAVVKKLVEKGADVNRGDKDDDTPLHV
AARSGFGSLVSLLLDLGAPSHVINKAGKEPKSIAFNASVGALL*
back to top

mRNA from alignment at F-serratus_M_contig81:750072..754852-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig81.19507.1 ID=mRNA_F-serratus_M_contig81.19507.1|Name=mRNA_F-serratus_M_contig81.19507.1|organism=Fucus serratus male|type=mRNA|length=4781bp|location=Sequence derived from alignment at F-serratus_M_contig81:750072..754852- (Fucus serratus male)
ATGTCGGAGAAGAGAAGGAGGTCGTCCTTGCTTCAAGATCTCGTGAACAA
AAGGGCTGAGGATAAAGCTCAGGTGTGGTCGTTGGCAAGTAATCGTGGTC
TGACGCCAAAGATATCGAAACTTGTGAGCATCGACTAGGTATGTACCATT
CGTATTAATATTAATCATAGTAATAATAGTACATCTTCTCCCTTCACTTG
ATGTGTGCTATTAATACTGTAGTACTGTAGTAGTGACAAGTCGGAGCTGT
TATTAATATATAAGTAAGTATATATATATATTAATAGCCAGAGCTGTTAT
TACTTTTGGAGCAATATATCCAGTAATTTTGTAACAGCTCCGGAAGACAC
CACCAATAAATAAAATAGATCTACTCTAGACCTGAGCCTGTGTTACTCTC
ACTCCAACCCTAACTATTCCTTAGCTTAACTCGAACCCACACCCAAGCCG
AAACCTCGATCCTCTAACTAACCTCAATCCTTGATATTTCTCGGCGTGGA
CAATAACCAAGTAGACAGCCAGTGTTGACTCGAGCCCCTGGAGGCTGGCG
AGTTTTGGAGTTTTGGATCTGCTGCAAAAGTTAGTGGAGCAGGATCGGGT
TGATGTAAACGCTAAAGACGAGAGGGGGGTATCACCTATCATCTGGGCGA
CAAGGTAGGCGCATCGGCATCGGTTCGATCTCGACTGCGTTGAAGGGGAT
CAGTTGCTGAGGAGCGAGTAGTACATATTTGACTCATCAATTATTTATAT
GTGGGGAAGATAGGGAGGCATTTTACGAGATAGAGCAAAGCTCCTGGTTG
CTGCAGAATGAGGAGCGAGCCTGTTGTTTTGTTACTACAAGTCAGAAGGT
TCGATGCGTTCAGGGTTTTTTTTTAAGTAAGGTGCACGCGTGCCACGGAG
ACGGCTAATCCACCAACGCACGGAGTCATACTGCGTGAAAAGGGTTCTGG
ACTCACTCACACGCAGTAAAACATATCCGGCGTTCTTTATTAGGAGCGGG
CACGAAGAAGTTGCCGCCTACTTATTGGACAAGGGGGCTGACGTGGAGTC
GTACGGGTACGCTGGCATGAGGGCCCTACATCATGCGTGCAGCAACTCTC
ACGAAGGGTGCATCGCTCTTCTTCTTAACAAGGGCGCTGATCCAAATGCT
GTCGACGAATTTGGTGAGGTTGGTTCTATTCGAGTGTTTAGATTATACTA
GAAAATAGGAGAATCTTTATTCTAGATTTTAGATGGGAATTGTTATCTCG
TTATACTATTCTGCAGGGTCATACTATCACGTATGATGTAGCCCCCCGCA
TTTAGTCTTCGGTCGATAATAAATTTCATCGGACGTCTATTGATGTCCCT
TGTGTCTTACCTTCATGCTATGCGGATAACGATATGTTCTTAATGACATC
TCTCCAAGACTCTTAGCACTTCCCTCTGGCGGGGGTGTATTCACACACTA
GTATAACAGTGGTCCTTGACGTCGAGATTTACCTCAGATGCCAAGGAAGT
GGAGCAAGGCTGTCCAAGAGGGCAATGGCCTAGTTCCCCATTAAGATGAG
TTTGGGCCTGATCAACCCACGATGGTGGCCTTATGTCGAATGAATAAAGA
CCGATTCGATCAATCAGACCAGGACTTGGAAAGGATGATGAGTAATTTGA
ATCAACAAGGTAAAAAGCTGGACGAGCTTACGGAAAAAATGAGAGAAATA
TGACAGCGTTTAGCAGGCCTTAAGCAAAAAGCTCGGTAGTCACGTCTCGC
CACGGAGGCAGCCGTAGAACCTAACACTAAGACTCGCAAGCGTACGGAGG
ACGCTGAAGCAGATCCAGCAAAGCATATTGGTGATAGCTCTTCTGTAAAG
GTCGATATCGGCCCAACGAGTTCGACCAGCTTCGGCATGATGGCCGAACC
TCCGACTCGCCCTTCGAGGGATGACGCCCTGGTCGACAAAGACACTGCGG
CGCCAAAGCGTGTCTCTCACCCGTAGGGATTCACACGCTAACTGCCGCTG
GTGGCTTACTTTCCGCCGGCACAGTCTTCACAACGACGAGGACCATCTTT
CACCAGCCGCCTCTTTGGTTCTGTCCGACCGAAAAGATGAATTTTAGGAC
GGAGACATCAATCCAATACGCCACGTACTATAGCAGTTTCTGGAAAATGA
AGGTATAAAAAAAGAAAACAAGGCAGACCCTGGTGTTCGATCTTGGTGGT
TGTACATGTCGCCTACGCGCCTGCCCGTTTCTGGGACGATGGCGCGCGTT
GCTTTGTGGGGAGAGTTTCGTTTGGGTGCCGAATGGTACCCAAGGCTGAA
GCGTTTTTCAGTGGGAATATGACTTGGAATATTATTTTCCGAGTTTACGT
TCGATCACTGTCTCGCCAAAGCCAGCCTGGTTCAAGGGAGCCCCAAAAGT
CAGACAGCACAAGGCTATAAGAGCTGCGGGAACGAACGGATGTCAGGGAG
CGCCATGGAGCGAGGAGCTTGATGAAAAGGAACTCCACGGAGCGGCTTGG
TGGCGAGTTCGATCTGGAGTCGAGGGAATTCATTTTTTCCTGTACAGCAA
GTCAGCGACAACATGTGGTGTTATGCTGGTTTTGAATGAGATGGTGTTTT
TTTACATGATCCCTTGTACTACTGCTGTATTACTGCACAATATCTGACGT
ATAGTTTTGTCTCTTTCCTCGCAAAATGTGCTTTTGTTACACGGAGTGGC
CTTCGAAAGTAATTTTCAACTTGTAACGTCGCGCATGTAGCTTCGTTATT
TGTAGCGAGTGTTCGTTCAGGGAGGGTTGTCACCGAGAACTCGCGCATAG
CCCTAGTTACTCGCCAGCGAGCGTTGGACTTGGGAGGATATTATCGATGT
TGACCGTATGATCGCTTGAGTACTACATTAATCAGATCTGTATTGCTCCG
CTCAGACTAAATCGTTACAAAATTGCATGCCTCGAGGTAGCAGTTTCGTA
ATCCTTGATTGTAGACTCTGTGAGTAACAATGTTTGCGGCGTGTCTTGCG
GACTCCCCTTTCCCTCAAATATCGCAGGAGTATTATGAGCTTTACAGTAC
TGTAGACCGTTGTACTGAAACGAAAGTTCCCTACAGTGCTCAATTGTAGC
TCGCTTTAGCCAGCATACAGCCGTAGGTAGCCTGCAAACTGCTTCCTGAA
AAATGACTGCAAATGGGACTCTGATCCTCTTTTCTGTAGAGAATGAGTAC
CTAGCGCATTCTTCTAGCCGATGGCGCATACAGTATTGTTGCTTATACAC
CAGTACAGTACTATTGTGCCTCAAATGAAAGAGTTATTTTGGGTTGATCT
TGAAATACATCACCCAAAATATGCCATTAAGGAAACGGAAGTTTGATAAT
TGTAAGATGGTTCTGCCTTCTAAAGCAGCAGAATCTTTGTACATATTTGT
TTTGTTCGTAACAGGAAATACCTTGTTCGATGGGATCATCCACGCTCAAT
TGAAAATTTCGCCTTTACATGCATTCATTCGAGAGGGAAATTTTCATTGC
GTTTTTTAAATCCGATCGCGTACTGTCGGTGCGCATTATTTGCAGCGTGG
ATTCCTCAATTGAAATAGCCTAGTTCTAAAGTTATTCGAAGTCGTAAGAA
TAGGATCAGTTTTTCTTCATCTTGCTCGCGTCAAGTTTGACTGAATCTGA
CTTTTGAATGGCCCTGTTTTCTCTGTTTTCTCGCCGCCTTGCTACTGTCT
AGTAGAATCAATTGGAGGGTATTCGAATAGCTAGATTATACTAGAAAAAG
AGGAGAAAATATTTACTCGTAATCCTAGATGGACTGTTTTTAATCTTGTT
ATACTCTTCTGCAGGGTCATACTACACGTATGGTGTACCCGTATTAGTCT
TCTGACGGTAGTAACTGTATTCGGACACCTATTGACGTCCCTTGAGTATT
ATCTTCATGCCATGCTGATACTGATATGCTCTCAATAGCATCTCTCCAAG
ATTCTTAGCCCTTCCCTCTGGCGATGATATATTAACAGGTTCAACCTCGG
GTTAAAATATGTAACTGCGTACGACGTATTACGTAACTCGTACACGATTT
CGATTGAACTACCATCGATCTGGAAGGAGCGTGCAGACAAAAGTGGGCGG
CCTTATATTCACCCTCCTTTTTGCGGATCTACGTTGTACCCCACATGACA
TGCTAGGTAACAGCCCCCTCCATTATGCGGCTTGTCGGGGCGTGTTGAAC
ATAATTATGCGACTTCTGGCCAACGGAGCAGAACCAGATTTGGCAAACAT
ACAGGGTTCGACGCCGCTGCACAAAGCCTGCGTTTTTGGACAGAACGCCG
TCGTGAAGAAGCTTGTGGAGTGAGTGCGGAAATAAGCTGAAAAAAGTTGA
CAGCACAAGCAAGTACCACCAGCAGGAGATTTCCGAGTATGAAATTCTAC
ATCATTTTTCTTTTGCCATGTATCGAAGAGATGAAATCAAAGATACGTCA
GTTGGATACTACGTCATGCTTGGCAGACTAGCTTCGATAATATTTGCGCC
ACTCCTCCAAGGATCCACCATCTCACTGCCCCAACAAGTTGAAGAAATGG
GTTCATCTTTACGATCTGAACAACGTACGTGCTGCATAGTATAGGAAAGG
AGCAGACGTCAATCGAGGCGACAAGGACGACGACACCCCGCTCCACGTGG
CAGCGCGGAGCGGTTTCGGATCTCTGGTGTCGCTCCTCTTGGATCTTGGC
GCGCCTTCGCACGTTATCAACAAGGCTGGCAAGGAACCCAAGAGCATCGC
ATTCAATGCTTCGGTGGGGGCGCTCCTTTGA
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig81:750072..754852-

>mRNA_F-serratus_M_contig81.19507.1 ID=mRNA_F-serratus_M_contig81.19507.1|Name=mRNA_F-serratus_M_contig81.19507.1|organism=Fucus serratus male|type=CDS|length=1464bp|location=Sequence derived from alignment at F-serratus_M_contig81:750072..754852- (Fucus serratus male)
ATGTCGGAGAAGAGAAGGAGGTCGTCCTTGCTTCAAGATCTCGTGAACAA
AAGGGCTGAGGATAAAGCTCAGATGTCGGAGAAGAGAAGGAGGTCGTCCT
TGCTTCAAGATCTCGTGAACAAAAGGGCTGAGGATAAAGCTCAGACAGCC
AGTGTTGACTCGAGCCCCTGGAGGCTGGCGAGTTTTGGAGTTTTGGATCT
GCTGCAAAAGTTAGTGGAGCAGGATCGGGTTGATGTAAACGCTAAAGACG
AGAGGGGGGTATCACCTATCATCTGGGCGACAAGACAGCCAGTGTTGACT
CGAGCCCCTGGAGGCTGGCGAGTTTTGGAGTTTTGGATCTGCTGCAAAAG
TTAGTGGAGCAGGATCGGGTTGATGTAAACGCTAAAGACGAGAGGGGGGT
ATCACCTATCATCTGGGCGACAAGGAGCGGGCACGAAGAAGTTGCCGCCT
ACTTATTGGACAAGGGGGCTGACGTGGAGTCGTACGGGTACGCTGGCATG
AGGGCCCTACATCATGCGTGCAGCAACTCTCACGAAGGGTGCATCGCTCT
TCTTCTTAACAAGGGCGCTGATCCAAATGCTGTCGACGAATTTGGAGCGG
GCACGAAGAAGTTGCCGCCTACTTATTGGACAAGGGGGCTGACGTGGAGT
CGTACGGGTACGCTGGCATGAGGGCCCTACATCATGCGTGCAGCAACTCT
CACGAAGGGTGCATCGCTCTTCTTCTTAACAAGGGCGCTGATCCAAATGC
TGTCGACGAATTTGGTAACAGCCCCCTCCATTATGCGGCTTGTCGGGGCG
TGTTGAACATAATTATGCGACTTCTGGCCAACGGAGCAGAACCAGATTTG
GCAAACATACAGGGTTCGACGCCGCTGCACAAAGCCTGCGTTTTTGGACA
GAACGCCGTCGTGAAGAAGCTTGTGGAGTAACAGCCCCCTCCATTATGCG
GCTTGTCGGGGCGTGTTGAACATAATTATGCGACTTCTGGCCAACGGAGC
AGAACCAGATTTGGCAAACATACAGGGTTCGACGCCGCTGCACAAAGCCT
GCGTTTTTGGACAGAACGCCGTCGTGAAGAAGCTTGTGGAGAAAGGAGCA
GACGTCAATCGAGGCGACAAGGACGACGACACCCCGCTCCACGTGGCAGC
GCGGAGCGGTTTCGGATCTCTGGTGTCGCTCCTCTTGGATCTTGGCGCGC
CTTCGCACGTTATCAACAAGGCTGGCAAGGAACCCAAGAGCATCGCATTC
AATGCTTCGGTGGGGGCGCTCCTTTGAGAAAGGAGCAGACGTCAATCGAG
GCGACAAGGACGACGACACCCCGCTCCACGTGGCAGCGCGGAGCGGTTTC
GGATCTCTGGTGTCGCTCCTCTTGGATCTTGGCGCGCCTTCGCACGTTAT
CAACAAGGCTGGCAAGGAACCCAAGAGCATCGCATTCAATGCTTCGGTGG
GGGCGCTCCTTTGA
back to top