prot_F-serratus_M_contig8091.19489.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig8091.19489.1
Unique Name	prot_F-serratus_M_contig8091.19489.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	71

Homology

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BLAST of mRNA_F-serratus_M_contig8091.19489.1 vs. uniprot
Match: A0A2G8KT27_STIJA (Histone H3, embryonic n=2 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8KT27_STIJA)

HSP 1 Score: 126 bits (316), Expect = 1.580e-35
Identity = 69/70 (98.57%), Postives = 70/70 (100.00%), Query Frame = 0

Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPSNV 70
            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPS+V
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPSSV 70

[Close]

BLAST of mRNA_F-serratus_M_contig8091.19489.1 vs. uniprot
Match: A0A3Q1ETQ9_9TELE (Histone H3-like centromeric protein CSE4 n=2 Tax=Acanthochromis polyacanthus TaxID=80966 RepID=A0A3Q1ETQ9_9TELE)

HSP 1 Score: 122 bits (307), Expect = 3.310e-35
Identity = 67/70 (95.71%), Postives = 69/70 (98.57%), Query Frame = 0

Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPSNV 70
            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLP ++
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPLHL 70

[Close]

BLAST of mRNA_F-serratus_M_contig8091.19489.1 vs. uniprot
Match: A0A803VZ04_FICAL (Histone domain-containing protein n=62 Tax=Bilateria TaxID=33213 RepID=A0A803VZ04_FICAL)

HSP 1 Score: 122 bits (306), Expect = 3.560e-35
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0

Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLP 67
            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLP
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLP 67

[Close]

BLAST of mRNA_F-serratus_M_contig8091.19489.1 vs. uniprot
Match: A0A7K5BIJ3_9FURN (H3 protein (Fragment) n=5 Tax=Amniota TaxID=32524 RepID=A0A7K5BIJ3_9FURN)

HSP 1 Score: 122 bits (306), Expect = 3.870e-35
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0

Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLP 67
            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLP
Sbjct:    4 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLP 70

[Close]

BLAST of mRNA_F-serratus_M_contig8091.19489.1 vs. uniprot
Match: A2VD44_DANRE (Zgc:158701 protein n=1 Tax=Danio rerio TaxID=7955 RepID=A2VD44_DANRE)

HSP 1 Score: 122 bits (306), Expect = 3.870e-35
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0

Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLP 67
            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLP
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLP 67

[Close]

BLAST of mRNA_F-serratus_M_contig8091.19489.1 vs. uniprot
Match: A0A7K6S4K6_9GRUI (H3 protein (Fragment) n=1 Tax=Rhynochetos jubatus TaxID=54386 RepID=A0A7K6S4K6_9GRUI)

HSP 1 Score: 122 bits (306), Expect = 4.090e-35
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0

Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLP 67
            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLP
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLP 67

[Close]

BLAST of mRNA_F-serratus_M_contig8091.19489.1 vs. uniprot
Match: A0A0D6M4X2_9BILA (Histone domain-containing protein n=1 Tax=Ancylostoma ceylanicum TaxID=53326 RepID=A0A0D6M4X2_9BILA)

HSP 1 Score: 122 bits (306), Expect = 4.450e-35
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0

Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLP 67
            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLP
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLP 67

[Close]

BLAST of mRNA_F-serratus_M_contig8091.19489.1 vs. uniprot
Match: A0A5N5TEG7_9CRUS (Histone H4 n=1 Tax=Armadillidium nasatum TaxID=96803 RepID=A0A5N5TEG7_9CRUS)

HSP 1 Score: 122 bits (306), Expect = 5.130e-35
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0

Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLP 67
            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLP
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLP 67

[Close]

BLAST of mRNA_F-serratus_M_contig8091.19489.1 vs. uniprot
Match: UPI001A990969 (histone H3, embryonic-like n=1 Tax=Gasterosteus aculeatus aculeatus TaxID=481459 RepID=UPI001A990969)

HSP 1 Score: 122 bits (306), Expect = 5.430e-35
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0

Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLP 67
            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLP
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLP 67

[Close]

BLAST of mRNA_F-serratus_M_contig8091.19489.1 vs. uniprot
Match: A0A6N7K5Z4_9GAMM (Histone domain-containing protein (Fragment) n=1 Tax=Stenotrophomonas sp. MYb238 TaxID=2040281 RepID=A0A6N7K5Z4_9GAMM)

HSP 1 Score: 122 bits (306), Expect = 5.590e-35
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0

Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLP 67
            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLP
Sbjct:    7 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLP 73

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig8091.19489.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig8091.19489.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A2G8KT27_STIJA	1.580e-35	98.57	Histone H3, embryonic n=2 Tax=Stichopus japonicus ...	[more]
A0A3Q1ETQ9_9TELE	3.310e-35	95.71	Histone H3-like centromeric protein CSE4 n=2 Tax=A...	[more]
A0A803VZ04_FICAL	3.560e-35	100.00	Histone domain-containing protein n=62 Tax=Bilater...	[more]
A0A7K5BIJ3_9FURN	3.870e-35	100.00	H3 protein (Fragment) n=5 Tax=Amniota TaxID=32524 ...	[more]
A2VD44_DANRE	3.870e-35	100.00	Zgc:158701 protein n=1 Tax=Danio rerio TaxID=7955 ...	[more]
A0A7K6S4K6_9GRUI	4.090e-35	100.00	H3 protein (Fragment) n=1 Tax=Rhynochetos jubatus ...	[more]
A0A0D6M4X2_9BILA	4.450e-35	100.00	Histone domain-containing protein n=1 Tax=Ancylost...	[more]
A0A5N5TEG7_9CRUS	5.130e-35	100.00	Histone H4 n=1 Tax=Armadillidium nasatum TaxID=968...	[more]
UPI001A990969	5.430e-35	100.00	histone H3, embryonic-like n=1 Tax=Gasterosteus ac...	[more]
A0A6N7K5Z4_9GAMM	5.590e-35	100.00	Histone domain-containing protein (Fragment) n=1 T...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000164	Histone H3/CENP-A	PRINTS	PR00622	HISTONEH3	coord: 34..55 score: 93.58 coord: 17..31 score: 92.32 coord: 3..17 score: 97.1 coord: 58..70 score: 53.62
IPR000164	Histone H3/CENP-A	PANTHER	PTHR11426	HISTONE H3	coord: 1..67
IPR000164	Histone H3/CENP-A	PROSITE	PS00322	HISTONE_H3_1	coord: 15..21
IPR009072	Histone-fold	GENE3D	1.10.20.10		coord: 2..69 e-value: 3.4E-31 score: 109.9
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 2..67
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 1..67 e-value: 1.9E-15 score: 57.4
None	No IPR available	PANTHER	PTHR11426:SF224		coord: 1..67

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig8091	contig	F-serratus_M_contig8091:4752..4982 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig8091.19489.1	mRNA_F-serratus_M_contig8091.19489.1	Fucus serratus male	mRNA	F-serratus_M_contig8091 4584..4982 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig8091.19489.1 ID=prot_F-serratus_M_contig8091.19489.1|Name=mRNA_F-serratus_M_contig8091.19489.1|organism=Fucus serratus male|type=polypeptide|length=71bp
MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALR
EIRRYQKSTELLIRKLPSNV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000164	Histone_H3/CENP-A
IPR009072	Histone-fold
IPR007125	Histone_H2A/H2B/H3