mRNA_F-serratus_M_contig8091.19489.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig8091.19489.1 vs. uniprot
Match: A0A3R7NWW4_PENVA (Histone domain-containing protein n=1 Tax=Penaeus vannamei TaxID=6689 RepID=A0A3R7NWW4_PENVA) HSP 1 Score: 167 bits (423), Expect = 7.830e-51 Identity = 95/133 (71.43%), Postives = 106/133 (79.70%), Query Frame = 1
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPSNV*ISRAI--YASRDLPI----GSPGGRRGIPGWPI*RYQPVRHPRQACHYYAQGHPAGQAHPRR 381
MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLP + + + LP+ GS G RG+PG P+ +QPVRHPRQAC++YAQG+P +PRR
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDPLPVLCCHGSAGSLRGLPGRPLRGHQPVRHPRQACNHYAQGYPTCSPYPRR 133
BLAST of mRNA_F-serratus_M_contig8091.19489.1 vs. uniprot
Match: A0A485MXG5_LYNPA (H3 histone n=1 Tax=Lynx pardinus TaxID=191816 RepID=A0A485MXG5_LYNPA) HSP 1 Score: 158 bits (400), Expect = 1.750e-47 Identity = 94/148 (63.51%), Postives = 104/148 (70.27%), Query Frame = 1
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPSNV*ISRAIYASRDLPI---------------------GSPGGRRGIPGWPI*RYQPVRHPRQACHYYAQGHPAGQAHPRR 381
MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLI+ + RA + +P G+ GG RG+PG + +QPVRHPRQA H++AQGHPAG HPRR
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIQ-------VHRAAHPQAAVPAAGARDRAGLQDRPALPELGRDGAAGGVRGLPGGALRGHQPVRHPRQARHHHAQGHPAGAPHPRR 141
BLAST of mRNA_F-serratus_M_contig8091.19489.1 vs. uniprot
Match: W5NRH6_SHEEP (Histone domain-containing protein n=1 Tax=Ovis aries TaxID=9940 RepID=W5NRH6_SHEEP) HSP 1 Score: 158 bits (399), Expect = 1.080e-46 Identity = 94/131 (71.76%), Postives = 101/131 (77.10%), Query Frame = 1
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPSNV*ISRAIYASRDLPI----GSPGGRRGIPGWPI*RYQPVRHPRQACHYYAQGHPAGQAHPRR 381
MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLP + LP G+ G RG+PG + +QPVRHPRQA H++AQGHPA PRR
Sbjct: 41 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQR-LGEGDGVGPALPKLGCDGAAGSVRGLPGGALRGHQPVRHPRQARHHHAQGHPACTPDPRR 170
BLAST of mRNA_F-serratus_M_contig8091.19489.1 vs. uniprot
Match: A0A8D1S2G1_PIG (Histone domain-containing protein n=1 Tax=Sus scrofa TaxID=9823 RepID=A0A8D1S2G1_PIG) HSP 1 Score: 155 bits (392), Expect = 3.920e-46 Identity = 92/131 (70.23%), Postives = 100/131 (76.34%), Query Frame = 1
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPSNV*ISRAIYASR-DLPIGSPG-----GRRGIPGWPI*RYQPVRHPRQACHYYAQGHPAGQAHP 375
MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLP + + DL S G RG+PG + +QPV HPRQACHY+AQG+PA +P
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALRGVRGLPGGALRGHQPVCHPRQACHYHAQGYPACPPYP 131
BLAST of mRNA_F-serratus_M_contig8091.19489.1 vs. uniprot
Match: A0A1Z5LBX3_ORNMO (Histone H3 (Fragment) n=1 Tax=Ornithodoros moubata TaxID=6938 RepID=A0A1Z5LBX3_ORNMO) HSP 1 Score: 153 bits (386), Expect = 1.920e-44 Identity = 93/141 (65.96%), Postives = 104/141 (73.76%), Query Frame = 1
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPSNV*I--------------SRAIYASR----DLPI----GSPGGRRGIPGWPI*RYQPVRHPRQACHYYAQGHP 357
MARTKQTARKSTGGKAPRK LATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLP + S A+ A+R LP GS GG+R +P P+ R+QPVRHPRQA H++A+G+P
Sbjct: 1 MARTKQTARKSTGGKAPRKHLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMAARHRGSSLPELRRDGSAGGQRSLPRRPVRRHQPVRHPRQARHHHAKGYP 141
BLAST of mRNA_F-serratus_M_contig8091.19489.1 vs. uniprot
Match: A0A4U5LP26_STECR (Histone domain-containing protein n=1 Tax=Steinernema carpocapsae TaxID=34508 RepID=A0A4U5LP26_STECR) HSP 1 Score: 150 bits (379), Expect = 3.590e-44 Identity = 92/136 (67.65%), Postives = 99/136 (72.79%), Query Frame = 1
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPSNV*ISRA---------IYASRDLPIGSPGGRRGIPGWPI*RYQPVRHPRQACHYYAQGHPAGQAHPRR 381
MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLP + +S P SP R +P P+ +Q VRHPRQA H++AQ HPA HPRR
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSLCSPSRSP---RSLPRRPLRGHQLVRHPRQASHHHAQRHPARSPHPRR 133
BLAST of mRNA_F-serratus_M_contig8091.19489.1 vs. uniprot
Match: B8A6X4_ORYSI (Histone domain-containing protein n=1 Tax=Oryza sativa subsp. indica TaxID=39946 RepID=B8A6X4_ORYSI) HSP 1 Score: 144 bits (362), Expect = 1.590e-41 Identity = 89/139 (64.03%), Postives = 100/139 (71.94%), Query Frame = 1
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPSNV*I--------------SRAIYASRDLPIGSPGGRRGIPGWPI*RYQPVRHPRQACHYYAQGHPAGQAHP 375
MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLP + S A+ A ++ P RR + G +QP+RHPRQA H++AQGHPA HP
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAPRLP---RRALRG-----HQPLRHPRQARHHHAQGHPARPPHP 131
BLAST of mRNA_F-serratus_M_contig8091.19489.1 vs. uniprot
Match: A0A3P8UEV8_AMPPE (Histone domain-containing protein n=1 Tax=Amphiprion percula TaxID=161767 RepID=A0A3P8UEV8_AMPPE) HSP 1 Score: 141 bits (356), Expect = 6.600e-40 Identity = 85/134 (63.43%), Postives = 96/134 (71.64%), Query Frame = 1
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPAT--GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPSNV*ISRAIYASRDLPI-------GSPGGRRGIPGWPI*RYQPVRHPRQACHYYAQGHPAGQAHP 375
MARTKQTARKSTGGKAPRKQLA +AARKSA AT GGVKKPHRYRPGT ALRE+RRYQKSTELLIRK P + +D P GS GG+RG+PG + ++ VRHPRQ H++AQ HPA HP
Sbjct: 1 MARTKQTARKSTGGKAPRKQLAAEAARKSATATATGGVKKPHRYRPGTEALREVRRYQKSTELLIRKPPFQRLVREIAQDFQDRPALPELRRHGSVGGQRGLPGRTLRGHRSVRHPRQEGHHHAQRHPASPPHP 134
BLAST of mRNA_F-serratus_M_contig8091.19489.1 vs. uniprot
Match: A0A0E0DW54_9ORYZ (Histone domain-containing protein n=2 Tax=Eukaryota TaxID=2759 RepID=A0A0E0DW54_9ORYZ) HSP 1 Score: 139 bits (350), Expect = 2.020e-39 Identity = 93/169 (55.03%), Postives = 103/169 (60.95%), Query Frame = 1
Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPSNV*ISR-------------------------------------AIYASRD--LPIGSPGGRR---GIPGWPI*RYQPVRHPRQACHYYAQGHPAGQAHPRR 381
MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLP + AI+A R +P RR G+P + +QP+RHPRQA H++AQGHPA HPRR
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIXRGLPRRALRGHQPLRHPRQARHHHAQGHPARPPHPRR 169
BLAST of mRNA_F-serratus_M_contig8091.19489.1 vs. uniprot
Match: A0A8F5HTB3_9PEZI (Histone (Fragment) n=1 Tax=Colletotrichum orchidophilum TaxID=1209926 RepID=A0A8F5HTB3_9PEZI) HSP 1 Score: 132 bits (333), Expect = 9.790e-38 Identity = 75/112 (66.96%), Postives = 86/112 (76.79%), Query Frame = 1
Query: 40 GKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPSNV*ISR-AIYASRDLPI----GSPGGRRGIPGWPI*RYQPVRHPRQACHYYAQGHPA 360
GKAPRKQLA+KAARKSAP+TGGVKKPHRY+PGTVALREIRRYQKSTELLIRKLP ++R + LP+ SPG R +P P+ +QPVRH RQACH+ QGHPA
Sbjct: 2 GKAPRKQLASKAARKSAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVNRPGLQVRSPLPVVCDRRSPGVRGVLPCLPLRGHQPVRHSRQACHHPVQGHPA 113 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig8091.19489.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig8091.19489.1 >prot_F-serratus_M_contig8091.19489.1 ID=prot_F-serratus_M_contig8091.19489.1|Name=mRNA_F-serratus_M_contig8091.19489.1|organism=Fucus serratus male|type=polypeptide|length=71bp MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALRback to top mRNA from alignment at F-serratus_M_contig8091:4584..4982- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig8091.19489.1 ID=mRNA_F-serratus_M_contig8091.19489.1|Name=mRNA_F-serratus_M_contig8091.19489.1|organism=Fucus serratus male|type=mRNA|length=399bp|location=Sequence derived from alignment at F-serratus_M_contig8091:4584..4982- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig8091:4584..4982- >mRNA_F-serratus_M_contig8091.19489.1 ID=mRNA_F-serratus_M_contig8091.19489.1|Name=mRNA_F-serratus_M_contig8091.19489.1|organism=Fucus serratus male|type=CDS|length=426bp|location=Sequence derived from alignment at F-serratus_M_contig8091:4584..4982- (Fucus serratus male)back to top |