mRNA_F-serratus_M_contig809.19487.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig809.19487.1
Unique NamemRNA_F-serratus_M_contig809.19487.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig809.19487.1 vs. uniprot
Match: A0A6H5JUZ2_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUZ2_9PHAE)

HSP 1 Score: 838 bits (2164), Expect = 1.140e-294
Identity = 432/704 (61.36%), Postives = 520/704 (73.86%), Query Frame = 1
Query:  154 EDQTLEEVEEKLRSLCVEEGIIIYIAKSRREHDGTKERVTMKKFLCQRGGVNRQKEHQRSLDNVPGVVRRNSSGSKRTGCNFEITVRHAKSAAHPSLTNLKLEHNHVIDGGAMAINMQLGGKLTAAMNAQVEKLAAKGMKPQAVRSVLEALHDEP---VNRRAVQNAVAAETGGERIFDATDVYDEVANQAADGGVCRMKFDDEGRLSHIFWQTREQLSLWNRYGHVALYDDTAVKNRYRMPIGVFAVIDNNFRTRIVGQSITADTTMDTFVWMLKSALESRGGKQPDIFIQDADAAMTGAVRDVFPDAQPRRCLWHLYQNIIKALSKELGSSMHAFMDEFKMVRQQTSMMKFEEKLKALTLKYPKADRYMGVIYEDRKRWAEYVSPLAFSVGSWTTSRVEGQNALIKDKCNARTPLMDAARCFAGLISDQCDTAKLRDAIQHLPPERMAIPATTQFKGVLNACEFSIALWPRRFMEQEMGAAMLYCQLGGEELDGPQRAQALQRTFEYIEDKLCDVVSLFQVSEERDGQSYIYLVALFSDGSHLCQCRTLQTLGLGCRHFWAAMMLSHRFRFNVGLLHEHWLTEKARGTPKENWPSVAKPAWIAADRHGGAAAGTEGFQGAAANTG----GGKWKAFVGRSQTIQTILLDLQEKGRTVQDKQVCYADVTKTLGLTRSILSDSFPTEVAKDLALEFYNKVRRLA 2244
            E +TLE+VEE++  LCV EG I+  AKS R  DG  +RV MKK +C RGG +RQ E++ SLD  PGV RRN   S RT C     VRHAKS   P ++N+KL HNH +D  A+ + ++L  KLT     QV+++ + GMKP+ V   ++ LH++    +N+RAVQNA A   G E+  DA D Y+EV    ADGG+C +K DD GRL+HI+WQTREQ++LWNRYGHVALYDDTAVKNRYRMP+GV AVID+ +RTRIVGQ ITADTT DTF+ MLKSALESRGGKQPDIFIQDADAAMT AVR+VFPDA  RRCLW+L QNIIKAL+K LG  M  FMDEF+ VRQQ S+ KFE K  AL  KYPKA++YM V+Y+DR RWAEYVSPL FSVGSWT   VEGQNALIKDKCN+R+ L+D A+ F+G+I  Q D A LRDAI HLPP RM  P  T FK VL +CEFSIA WPRRFMEQEM AA+++CQ+GG E+DGP+RA AL RT EYIE KLCDV+++F + E+RDG+++ YLV LFSDGSHLCQCRTLQTLGL CRH WAAMM S RFRF+      HWLTEKARGTP+++WP VA+P W+ +  +  AA   +G  G     G    GG+WK+FVG SQT+QT+LLDL+EKG T QD++V YADVTK LG   SILSD F   VA  L  +F   V   A
Sbjct:   78 EGKTLEDVEEEVVRLCVGEGAILSTAKSTRCRDGATDRVDMKKLICTRGGKSRQLEYEASLDTAPGVQRRNVKRSARTDC----PVRHAKSHRWPRISNMKLTHNHSVDRKAIDVKLRLASKLTEEQLGQVQQMTSHGMKPKEVTKAMKVLHEDSDIDINKRAVQNAAATVHGAEKPRDAADAYEEVMAATADGGLCEIKMDDSGRLTHIWWQTREQVALWNRYGHVALYDDTAVKNRYRMPLGVLAVIDSEYRTRIVGQIITADTTTDTFLSMLKSALESRGGKQPDIFIQDADAAMTAAVREVFPDALARRCLWYLNQNIIKALAKVLGGDMKPFMDEFRCVRQQLSLAKFERKFNALIEKYPKAEKYMRVVYDDRARWAEYVSPLVFSVGSWTX--VEGQNALIKDKCNSRSSLLDVAKYFSGIICSQKDAAMLRDAIDHLPPNRMVAPPATAFKSVLESCEFSIASWPRRFMEQEMTAAIMFCQMGGGEVDGPERAAALGRTLEYIEGKLCDVINVFGIHEQRDGKAFDYLVLLFSDGSHLCQCRTLQTLGLFCRHVWAAMMHSPRFRFH------HWLTEKARGTPQQDWPDVARPRWVVSXSNRHAAGEVDGAAGEGEGEGVGGCGGRWKSFVGSSQTVQTVLLDLKEKGPTYQDRKVLYADVTKKLGQAASILSDRFSPTVAVALVDQFLTMVNMQA 769          
BLAST of mRNA_F-serratus_M_contig809.19487.1 vs. uniprot
Match: A0A6H5JNB0_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNB0_9PHAE)

HSP 1 Score: 719 bits (1856), Expect = 2.060e-249
Identity = 394/757 (52.05%), Postives = 480/757 (63.41%), Query Frame = 1
Query:  103 QAYNPQTFRGKLEAIEVEDQTLEEVEEKLRSLCVEEGIIIYIAKSRREHDGTKERVTMKKFLCQRGGVNRQKEHQRSLDNVPGVVRRNSSGSKRTGCNFEITVRHAKSAAHPSLTNLKLEHNHVIDGGAMAINMQLGGKLTAAMNAQVEKLAA----KGMKPQAVRSVLEALHDEP---VNRRAVQNAVAAETGGERIFDATDVYDEVANQAADGGVCRMKFDDEGRLSHIFWQTREQLSLWNRYGHVALYDDTAVKNRYRMPIGVFAVIDNNFRTRIVGQSITADTTMDTFVWMLKSALESRGGKQPDIFIQDADAAMTGAVRDVFPDAQPRRCLWHLYQNIIKALSKELGSSM----------------------------------------HAFMDEFKMVRQQTSMMKFEEKLKALTLKYPKADRYMGVIYEDRKRWAEYVSPLAFSVGSWTTSRVEGQNALIKDKCNARTPLMDAARCFAGLISDQCDTAKLRDAIQHLPPERMAIPATTQFKGVLNACEFSIALWPRRFMEQEMGAAMLYCQLGGEELDGPQRAQALQRTFEYIEDKLCDVVSLFQVSEERD-GQSYIYLVALFSDGSHLCQCRTLQTLGLGCRHFWAAMMLSHRFRFNVGLLHEHWLTEKARGTPKENWPSVAKPAWIA-ADRHGGAAAGTEGFQGAAANTGGGKWKAFVGR--------------SQTIQTILLDLQEKGRTVQDKQVCYADVTKTLGLTRSILSDSF 2184
            Q Y+    + KLEA++ E +TLE+V E++   C  EG+++  AKS R  DG  +RV MKK +C RGG +RQ EH+  LD  PGV+RRN  GS RTGC FE++VRHAKS   P +TN+KL HNHV+D  AMA+ ++L GKLT     QVEK+ +    +GMKP+AV   ++ALH++    +NRRAVQN  A+  G E+  DA D Y+EV    ADGGVC +K DD GRL+HI+WQTREQ++LWNRY               RMP+GV AVID+ +RTRIVGQSITADTT +TFVWMLKSAL SRGGKQPDIFIQDAD AMT AVR+VFPDA  RRCLWHLYQ+I+KAL+K+LG  M                                         AFMDEF+ VRQQ S+ KFE K  AL  KYP+ ++YM  +Y+DR RWAEYVSPL FSVGSWTT RVE Q    +     R             +S  C   +              +  TT FK VL +CEFS A WPRR MEQEM AA+++CQ+ G ELDG +RA AL RTFEYIEDKLCDV+ +F + E RD G+++ YLV LFSDGSHLCQCRT QTLGL CRH WAAMM S RFRF+VGLLH+HWLTEKARGTP ++WP VA+P ++  +DRH   A   E F+GAA                            SQT+Q  LLDL+EK  T Q++QV YADVTK LG   S  SD F
Sbjct:   11 QVYDSAVLKTKLEAVQTEGKTLEDVVEEVVRTCAIEGVVLSTAKSTRCRDGGTDRVDMKKLICTRGGGSRQLEHEARLDTEPGVIRRNRKGSARTGCQFEVSVRHAKSHPRPKITNMKLGHNHVVDRQAMAVKLRLAGKLTEEQRGQVEKMTSEEIERGMKPKAVHEAIQALHEDSDIEINRRAVQNVAASVHGAEKPRDAADAYEEVMAVTADGGVCEIKMDDSGRLTHIWWQTREQMALWNRY---------------RMPLGVLAVIDSEYRTRIVGQSITADTTTNTFVWMLKSALRSRGGKQPDIFIQDADVAMTAAVREVFPDALARRCLWHLYQHIMKALAKDLGGQMKVCSTVCVGMAGSSCAEALTQATPTSPASFRGRSACSCFAQAFMDEFRCVRQQLSLAKFERKFNALIAKYPQTEKYMRAVYDDRTRWAEYVSPLVFSVGSWTTPRVEVQLLCRESSAPRRMHPRGVT------LSTTCRLLE------------WLLQPTTAFKSVLESCEFSFAAWPRRLMEQEMTAAIMFCQMDGGELDGSERAAALGRTFEYIEDKLCDVIYVFGIREHRDDGRTFDYLVLLFSDGSHLCQCRTFQTLGLFCRHVWAAMMYSPRFRFHVGLLHQHWLTEKARGTPLQDWPDVARPRFVVISDRHASTAGAKERFEGAAGEXXXXXXXXXXXXXXXXXXXXXXXXXSSQTVQAALLDLKEKEPTDQERQVLYADVTKKLGQAASTFSDEF 734          
BLAST of mRNA_F-serratus_M_contig809.19487.1 vs. uniprot
Match: D8LU83_ECTSI (SWIM-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU83_ECTSI)

HSP 1 Score: 709 bits (1830), Expect = 9.880e-247
Identity = 347/507 (68.44%), Postives = 405/507 (79.88%), Query Frame = 1
Query:  640 NAVAAETGGERIFDATDVYDEVANQAADGGVCRMKFDDEGRLSHIFWQTREQLSLWNRYGHVALYDDTAVKNRYRMPIGVFAVIDNNFRTRIVGQSITADTTMDTFVWMLKSALESRGGKQPDIFIQDADAAMTGAVRDVFPDAQPRRCLWHLYQNIIKALSKELGSSMHAFMDEFKMVRQQTSMMKFEEKLKALTLKYPKADRYMGVIYEDRKRWAEYVSPLAFSVGSWTTSRVEGQNALIKDKCNARTPLMDAARCFAGLISDQCDTAKLRDAIQHLPPERMAIPATTQFKGVLNACEFSIALWPRRFMEQEMGAAMLYCQLGGEELDGPQRAQALQRTFEYIEDKLCDVVSLFQVSEERDGQSYIYLVALFSDGSHLCQCRTLQTLGLGCRHFWAAMMLSHRFRFNVGLLHEHWLTEKARGTPKENWPSVAKPAWIAADRHGGAAAGTEGFQGAAANTGG--GKWKAFVGRSQTIQTILLDLQEKGRTVQDKQVCYADVTKTLG 2154
            NA A   G E+  DA D Y+EV    ADGGVC +K DD GRL+HI+WQT+EQ++LWNRYGHVALYDDTAVKNRYRMP+GV AV+D+ +RTRIVGQSITADTT DTF+WMLKSALESRG KQPD FIQDADAAMT AVR+VFPDA  RR LWHL QN+IKAL+K LG  M  FMDEF+ VRQQ S+ KFE K  AL  KYPKA++YM V+Y+DR RWAEYVSPL FSVGSWTTSRVEGQNALI+D+CN+R+ L+D A+ F+G+I  Q D A LRDAI HLPP RMA P  T FK VL +CEFSIA WPRRFMEQEM AA+ +CQ+GG E+DGP+RA A  RTFEYIEDKLCD + +F + E+RD +++ YLV LFSDGSHLCQCRTLQTL L CRH WAAMM S RFRF+VGLLHEHWLTEKARGTP+++WP VA+P W+ ++RH          +G     GG  G+WK+FVG SQT+QT+LLDL+EKG T QD+QV YADVTK LG
Sbjct:  139 NAAAIVHGAEKPRDAADAYEEVMAATADGGVCEIKMDDSGRLTHIWWQTKEQVALWNRYGHVALYDDTAVKNRYRMPLGVLAVVDSEYRTRIVGQSITADTTTDTFLWMLKSALESRG-KQPDTFIQDADAAMTAAVREVFPDALARRNLWHLNQNVIKALAKVLGGYMKPFMDEFRCVRQQLSLAKFERKFNALIEKYPKAEKYMQVVYDDRARWAEYVSPLVFSVGSWTTSRVEGQNALIRDRCNSRSSLLDVAKYFSGIICSQKDAAMLRDAIDHLPPNRMAAPPATAFKSVLESCEFSIAGWPRRFMEQEMTAAITFCQMGGGEVDGPERAAASGRTFEYIEDKLCDAIYVFGIHEQRDDKAFDYLVLLFSDGSHLCQCRTLQTLRLFCRHVWAAMMYSPRFRFHVGLLHEHWLTEKARGTPQQDWPDVARPRWVVSNRHAAREVDGAAGEGEGEGVGGCSGRWKSFVGSSQTVQTVLLDLKEKGPTDQDRQVLYADVTKKLG 644          
BLAST of mRNA_F-serratus_M_contig809.19487.1 vs. uniprot
Match: A0A6H5K3E8_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3E8_9PHAE)

HSP 1 Score: 639 bits (1649), Expect = 1.280e-221
Identity = 319/485 (65.77%), Postives = 375/485 (77.32%), Query Frame = 1
Query:  595 LEALHDEP---VNRRAVQNAVAAETGGERIFDATDVYDEVANQAADGGVCRMKFDDEGRLSHIFWQTREQLSLWNRYGHVALYDDTAVKNRYRMPIGVFAVIDNNFRTRIVGQSITADTTMDTFVWMLKSALESRGGKQPDIFIQDADAAMTGAVRDVFPDAQPRRCLWHLYQNIIKALSKELGSSMHAFMDEFKMVRQQTSMMKFEEKLKALTLKYPKADRYMGVIYEDRKRWAEYVSPLAFSVGSWTTSRVEGQNALIKDKCNARTPLMDAARCFAGLISDQCDTAKLRDAIQHLPPERMAIPATTQFK-GVLNACEFSIALWPRRFMEQEMGAAMLYCQLGGEELDGPQRAQALQRTFEYIEDKLCDVVSLFQVSEERDGQSYIYLVALFSDGSHLCQCRTLQTLGLGCRHFWAAMMLSHRFRFNVGLLHEHWLTEKARGTPKENWPSVAKPAWIAADRHGGAAAGTEGFQGAAANTGGGKW 2037
            ++ALH++    +N+RAVQNA A   G E+  DA D Y+EV    ADGG+C +K DD GRL+HI+WQTREQ+ LWNRYGHVALYDDTAVKNRYRMP+GV AVID+ +RTRIVGQSITADTT DTF+WMLKSALESRGGKQPDIFIQDADAAMT AVR+VFPDA  RRCLWHL QNIIKAL+K LG  M         V    +++  E K  AL  K+PKA++YM V+Y+DR RW EYVSPL FSVG WTTS VEGQNALIKDKCN+R+ L+D A  F+G+I  Q D   LRDAI HLPP RM  P  T FK  VL +CEFSIA WPRRFMEQEM AA+++CQ+GG E DGP+RA AL RTFEYIE KLC V+ +F++ E+RDG+++ YL+ LFSDGS+LCQCRTLQTLGL CRH WAAMM S RFRF+VGLLHEHWLTEKARGTP+++WP VA+P W+ ++RH    A  E   GAA    GG W
Sbjct:    1 MKALHEDSDIDINKRAVQNAAATVHGAEKPRDAADAYEEVMAATADGGLCEIKMDDSGRLTHIWWQTREQVVLWNRYGHVALYDDTAVKNRYRMPLGVLAVIDSEYRTRIVGQSITADTTTDTFLWMLKSALESRGGKQPDIFIQDADAAMTAAVREVFPDALARRCLWHLNQNIIKALAKVLGGEMKTAFHGRVQVCASAAVIGKERKFNALIEKHPKAEKYMRVVYDDRARWVEYVSPLVFSVGLWTTSSVEGQNALIKDKCNSRSSLLDVATYFSGIIRSQKDAPMLRDAIDHLPPNRMVAPPATAFKKSVLESCEFSIAGWPRRFMEQEMTAAIMFCQMGGGEADGPERAAALGRTFEYIEGKLCGVIYVFRIHEQRDGKAFDYLILLFSDGSNLCQCRTLQTLGLFCRHVWAAMMHSPRFRFHVGLLHEHWLTEKARGTPQQDWPDVARPRWVVSNRH----AARE-VDGAAGEGEGGGW 480          
BLAST of mRNA_F-serratus_M_contig809.19487.1 vs. uniprot
Match: A0A6H5LMZ3_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LMZ3_9PHAE)

HSP 1 Score: 657 bits (1696), Expect = 1.410e-221
Identity = 330/536 (61.57%), Postives = 395/536 (73.69%), Query Frame = 1
Query:  436 PSLTNLKLEHNHVIDGGAMAINMQLGGKLTAAMN---------------------------------------AQVEKLAAKGMKPQAVRSVLEALHDE---PVNRRAVQNAVAAETGGERIFDATDVYDEVANQAADGGVCRMKFDDEGRLSHIFWQTREQLSLWNRYGHVALYDDTAVKNRYRMPIGVFAVIDNNFRTRIVGQSITADTTMDTFVWMLKSALESRGGKQPDIFIQDADAAMTGAVRDVFPDAQPRRCLWHLYQNIIKALSKELGSSMHAFMDEFKMVRQQTSMMKFEEKLKALTLKYPKADRYMGVIYEDRKRWAEYVSPLAFSVGSWTTSRVEGQNALIKDKCNARTPLMDAARCFAGLISDQCDTAKLRDAIQHLPPERMAIPATTQFKGVLNACEFSIALWPRRFMEQEMGAAMLYCQLGGEELDGPQRAQALQRTFEYIEDKLCDVVSLFQVSEERDGQSYIYLVALFSDGSHLCQCRTLQTLGLGCRHFWAAMMLSHRFRFNVGLLHEHWLTEKARGTP 1917
            P ++N+KL HNH ++  A+ + ++L  KLT                                            QV+++ + GMKP+ V   ++ALH++    +N+RAVQNA A   G ++  DA D Y+EV    ADGG+C +K DD GRL+HI+WQTREQ++LWNR GHVALYDDTAVKNRYRMP+GV AVID+ +RTRIVGQSITADTT DTF+WMLKSALESRGGKQPDIFIQDA AAMT AVR+VFPDA  RRCLWHL QNIIKAL+K LG  M  FMDEF+ VRQQ S+ KFE K  A   KYPKA++YM V+Y+DR RWAEYV P+ FS+GSWTTSR+EGQNALI+DKCN+R+ L+D A+ F+G I  Q D A LRDAI HLPP RMA P  T FK VL +CEFSIA WPRRFMEQEM AA+++CQ+GG E+DGP+RA A  RTFEYIE KLCDV+ +F + E+RDG+++ YLV LFSDGS LCQCRTLQTLGL CRH  AAMM S RFRF+VGLLHEHWLTEKARGTP
Sbjct:  406 PRISNMKLTHNHSVNRKAIDVKLRLASKLTXIGEESVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEEQLGQVKQMTSHGMKPKEVTKAMKALHEDGDIDINKRAVQNAAATVHGAKKPRDAADSYEEVMAATADGGLCEIKMDDSGRLTHIWWQTREQVALWNRCGHVALYDDTAVKNRYRMPLGVLAVIDSEYRTRIVGQSITADTTTDTFLWMLKSALESRGGKQPDIFIQDAVAAMTAAVREVFPDALARRCLWHLKQNIIKALAKVLGGDMKPFMDEFRCVRQQLSLTKFERKFNAFIEKYPKAEKYMRVVYDDRARWAEYVPPVVFSLGSWTTSRIEGQNALIRDKCNSRSSLLDVAKYFSGTIRSQKDAAMLRDAIDHLPPNRMAAPPATAFKSVLESCEFSIAGWPRRFMEQEMTAAIMFCQMGGGEVDGPERAAASGRTFEYIEGKLCDVIYVFGIHEQRDGKAFDYLVLLFSDGSRLCQCRTLQTLGLFCRHVLAAMMHSPRFRFHVGLLHEHWLTEKARGTP 941          
BLAST of mRNA_F-serratus_M_contig809.19487.1 vs. uniprot
Match: A0A6H5JFD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFD7_9PHAE)

HSP 1 Score: 554 bits (1428), Expect = 5.210e-188
Identity = 299/516 (57.95%), Postives = 348/516 (67.44%), Query Frame = 1
Query:  748 DDEGRLSHIFWQTREQLSLWNRYGHVALYDDTAVKNRYRMPIGVFAVIDNNFRTRIVGQSITADTTMDTFVWMLKSALESRGGKQPDIFIQDADAAMTGAVRDVFPDAQPRRCLWHLYQNIIKALSKELGSSMH---------AFMDEFKMVRQQTSMMKFEEKLKALTLKYPKADRYMGVIYEDRKRWAEYVSPLAFSVGSWTTSRVEGQNALIKDKCNARTPLMDAARCFAGLISDQCDTAKLRDAIQHLPPERMAIPATTQFKGVLNACEFSIALWPRRFMEQEMGAAMLYCQLGGEELDGPQRAQALQRTFEYIEDKLCDVVSLFQVSEERDGQSYIYLVALFSDGSHLCQCRTLQTLGLGCRHFWAAMMLSHRFRFNVGLLHEHWLTEKARGTPKENWPSVAKPAWIAADRHGGAAAGTEGFQGAAANTGGGKWKAFVGRSQTIQTILLDLQEKGRTVQDKQVCYADVTKTLGLTRSILSDSFPTEVAKDLALEFYNKVRRLAHAQAGVAG 2268
            DD GRL+HI+WQ+REQ++LWN YGHV LYDDTAVKNRYRMP+GV AVID+ +RTRIVGQSITADTT +TFVW                   DAD AMT AV +VFPDA  RRCLWHL+QNI+K L+K+LG  M          AFMDEF+ VRQQ S+ KFE K  AL  KYP+ ++YM  +Y+DR RWAEYVSPL FSVGSWTTSRVEGQNALIKDKCN+R+ L+D A+ F+G+I  Q D A LRDAI HLPP RMA P TT  K VL +CEFSIA WPRR MEQEM AA++YCQ+ G E+DGP+RA A +RT                        ++ YLV LFSD SHLCQCRTLQTLGL CR  WAAMM S RFRF+VGLLHEHWLTEKARGTP  +WP VA+P W              G +    + GGG        SQT+QT++LDL+EKG T QD+QV YA+VTK LG   SILSD F   VA     +F   V    + QAG AG
Sbjct:    2 DDSGRLTHIWWQSREQVALWNGYGHVTLYDDTAVKNRYRMPLGVLAVIDSEYRTRIVGQSITADTTTNTFVW-------------------DADVAMTAAVSEVFPDALWRRCLWHLHQNIMKTLAKDLGGQMKVCSTVCVGMAFMDEFRCVRQQLSLAKFERKFNALIAKYPQTEKYMRAVYDDRTRWAEYVSPLVFSVGSWTTSRVEGQNALIKDKCNSRSSLLDMAKYFSGIICSQKDAAALRDAIDHLPPARMATPPTTALKSVLESCEFSIAAWPRRLMEQEMTAAIMYCQMDGGEVDGPERAAASRRT------------------------TFDYLVLLFSDVSHLCQCRTLQTLGLFCRQVWAAMMHSPRFRFHVGLLHEHWLTEKARGTPLHDWPDVARPRWEK----------WTGRRERERDGGGGX------SSQTVQTVVLDLKEKGPTDQDRQVVYANVTKKLGQAASILSDKFSPTVAVARVDQFLATV----NVQAGGAG 454          
BLAST of mRNA_F-serratus_M_contig809.19487.1 vs. uniprot
Match: A0A6H5JAS6_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAS6_9PHAE)

HSP 1 Score: 521 bits (1343), Expect = 3.370e-175
Identity = 280/539 (51.95%), Postives = 343/539 (63.64%), Query Frame = 1
Query:  103 QAYNPQTFRGKLEAIEVEDQTLEEVEEKLRSLCVEEGIIIYIAKSRREHDGTKERVTMKKFLCQRGGVNRQKEHQRSLDNVPGVVRRNSSGSKRTGCNFEITVRHAKSAAHPSLTNLKLEHNHVIDGGAMAINMQLGGKLTAAMNAQVEKLAAKGMKPQAVRSVLEALHDEP---VNRRAVQNAVAAETGGERIFDATDVYDEVANQAADGGVCRMKFDDEGRLSHIFWQTREQLSLWNRYGHVALYDDTAVKNRYRMPIGVFAVIDNNFRTRIVGQSITADTTMDTFVWMLKSALESRGGKQPDIFIQDADAAMTGAVRDVFPDAQPRRCLWHLYQNIIKALSKELGSSM-------------------------------HAFMDEFKMVRQQTSMMKFEEKLKALTLKYPKADRYMGVIYEDRKRWAEYVSPLAFSVGSWTTSRVEGQNALIKDKCNARTPLMDAARCFAGLISDQCDTAKLRDAIQHLPPERMAIPATTQFKGVLNACEFSIALWPRRFMEQEMGAAMLYCQLGG 1617
            Q Y+P     +LEA++ E + LE+V E++   C  EG+++  AKS R  DG  +RV MKK +C RGG +RQ EH+  LD  PGV+RRN  GS RTGC FE++VRHA S   P +TN+KL HNHV+D  AMA+ ++L GKLT     QVEK+ +KGMKP+AV   ++ALH++    +NRRAVQN  A+  G E+  DA D Y+EV    ADGGVC +K DD GRL+HI+WQTREQ++LWNRY               RMP+GV AVID+ +RTRIVGQSITADTT +TFVWMLKSAL SRGGKQPDIFIQDAD AMT AVR+VFPDA  RRCLWHLYQ+I+KAL+K+LG  M                                AFMDEF+ VRQQ S+ KFE K  AL  KYP+ ++YM  +Y+DR RWAEYVSPL FSVGSWTT RVE Q    +     R             +S  C   +              +  TT FK VL +CEFSIA WPRR MEQEM AA+LYCQ+ G
Sbjct:   11 QVYDPALLTTELEAVQTEGKILEDVVEEVVRTCAFEGVVLSTAKSTRCRDGGTDRVDMKKLICTRGGGSRQLEHEARLDTEPGVIRRNRKGSARTGCQFEVSVRHANSHPRPKITNIKLGHNHVVDRQAMAVKLRLAGKLTEEQRGQVEKMTSKGMKPKAVHEAIQALHEDSDIEINRRAVQNVAASVHGAEKPRDAADAYEEVMAVTADGGVCEIKMDDSGRLTHIWWQTREQMALWNRY---------------RMPLGVLAVIDSEYRTRIVGQSITADTTTNTFVWMLKSALRSRGGKQPDIFIQDADVAMTAAVREVFPDALARRCLWHLYQHIMKALAKDLGGQMKAGSSCAEALTQATPTSPASFRGRSACSCFAQAFMDEFRCVRQQLSLAKFERKFNALIAKYPQTEKYMRAVYDDRTRWAEYVSPLVFSVGSWTTPRVEVQLLFRESSAPRRMHPRGVT------LSTTCRLLE------------WLLQPTTAFKSVLESCEFSIAAWPRRLMEQEMTAAILYCQIDG 516          
BLAST of mRNA_F-serratus_M_contig809.19487.1 vs. uniprot
Match: A0A6H5JZ86_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ86_9PHAE)

HSP 1 Score: 484 bits (1246), Expect = 1.200e-162
Identity = 241/358 (67.32%), Postives = 283/358 (79.05%), Query Frame = 1
Query:  751 DEGRL-SHIFWQTREQLSLWNRYGHVALYDDTAVKNRYRMPIGVFAVIDNNFRTRIVGQSITADTTMDTFVWMLKSALESRGGKQPDIFIQDADAAMTGAVRDVFPDAQPRRCLWHLYQNIIKALSKELGSSMHAFMDEFKMVRQQTSMMKFEEKLKALTLKYPKADRYMGVIYEDRKRWAEYVSPLAFSVGSWTTSRVEGQNALIKDKCNARTPLMDAARCFAGLISDQCDTAKLRDAIQHLPPERMAIPATTQFKGVLNACEFSIALWPRRFMEQEMGAAMLYCQLGGEELDGPQRAQALQRTFEYIEDKLCDVVSLFQVSEERDGQSYIYLVALFSDGSHLCQCRTLQTLGLGCR 1821
            D  RL + + W   +Q++LWNRYGHVALYDDTAVKNRYRMP+GV AVID+ +RTRIVGQSITADTT DTF WMLKSALESRGGKQPDI IQDADAAMT AVR+VFPDA  RRCLWHL QNIIKAL+K LG  M  F+DEF+ V QQ S+ KFE K  AL  KYPKA++YM V+++DR RWAEYVSPL FSVG         QNALI+DKCN+R+ L+D A+ F+ +I  Q D A LRDAI HLPP RMA P  T FK VL +CEFSIA WPRRFMEQEM AA+++CQ+GG E+DGP+RA AL RTFEYIE KLCDV+++F + E+RDG+++ YLV LFSDGSHLCQCRT++    G R
Sbjct:    2 DGNRLGTGLIWSLFKQVALWNRYGHVALYDDTAVKNRYRMPLGVLAVIDSEYRTRIVGQSITADTTTDTFQWMLKSALESRGGKQPDISIQDADAAMTAAVREVFPDALARRCLWHLNQNIIKALAKVLGGDMKPFVDEFRCVHQQLSLAKFERKFNALIEKYPKAEKYMRVVHDDRARWAEYVSPLVFSVG---------QNALIRDKCNSRSSLLDVAKYFSVIICSQKDAAMLRDAIDHLPPNRMAAPPATAFKSVLESCEFSIAGWPRRFMEQEMTAAIMFCQMGGGEVDGPERAAALGRTFEYIEGKLCDVINVFGIHEQRDGKAFDYLVLLFSDGSHLCQCRTMREKWTGRR 350          
BLAST of mRNA_F-serratus_M_contig809.19487.1 vs. uniprot
Match: A0A6H5KZF1_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZF1_9PHAE)

HSP 1 Score: 466 bits (1200), Expect = 1.350e-152
Identity = 254/534 (47.57%), Postives = 327/534 (61.24%), Query Frame = 1
Query:  103 QAYNPQTFRGKLEAIEVEDQTLEEVEEKLRSLCVEEGIIIYIAKSRREHDGTKERVTMKKFLCQRGGVNRQKEHQRSLDNVPGVVRRNSSGSKRTGCNFEITVRHAKSAAHPSLTNLKLEHNHVIDGGAMAINMQLGGKLTAAMNAQVEKLAAKGMKPQAVRSVLEALHDEP---VNRRAVQNAVAAETGGERIFDATDVYDEVANQAADGGVCRMKFDDEGRLSHIFWQTREQLSLWNRYGHVALYDDTAVKNRYRMPIGVFAVIDNNFRTRIVGQSITADTTMDTFVWMLKSALESRGGKQPDIFIQDADAAMTGAVRDVFPDAQPRRCLWHLYQNIIKALSKELGSSMH-------------------------------------------AFMDEFKMVRQQTSMMKFEEKLKALTLKYPKADRYMGVIYEDRKRWAEYVSPLAFSVGSWTTSRVEGQNALIKDKCNARTPLMDAARCFAGLISDQCDTAKLRDAIQHLPPERMAIPATTQFKGVLNACEFSIALWPRR 1566
            Q  NP   + KLEA+  E +T E+V E++   C  EG I+  AKS R  DG  +RV +KK +C RGG  RQ E++  LD                     +++RHA++   P ++N+KLEHNHV++  A+ + ++L GKLT     QVEK+ +KGMKP+AV   ++ALH++    +N+RAVQNA A+  G E+  DA D Y+EV    ADGGVC +K DD G L+HI+WQ+REQ++LWNRYGH+ALYDDTAVKNRYRMP+GV AVID+++RTR +GQS TAD T DTF+WMLK AL SRGGK+PDIFIQDADAAMT AVR+VFP+A  RRCLWHL QNI+KAL+K+LG  +                                            AFMDEF+ VRQQ S+ K E +  AL  KYP+ ++YM V+Y+DR R                             KCN+R  L+D A+ F+G+I  Q D A LRDA+ HLPP RMA P  T FK VL +CEFSIA WPRR
Sbjct:   60 QVNNPAVVKTKLEAVPTEGKTPEDVVEEVVRTCTGEGAILSTAKSTRCRDGATDRVDIKKLICTRGGGCRQLEYEARLDTRL------------------VSIRHARTHQWPKISNMKLEHNHVVNREAIDVKLRLAGKLTEERRGQVEKMISKGMKPKAVTEAMKALHEDSDVDINKRAVQNAAASVHGAEKPGDAADAYEEVMVVTADGGVCEIKMDDSGCLTHIWWQSREQVALWNRYGHIALYDDTAVKNRYRMPLGVLAVIDSDYRTRTIGQSTTADITTDTFLWMLKGALRSRGGKRPDIFIQDADAAMTAAVREVFPEALARRCLWHLNQNIMKALAKDLGGKLKVCSTVCLPLNRIRRYLMRRGPNARNTHSAYLFRERPACSCFPLAFMDEFRCVRQQLSLAKLEGEFNALIAKYPQTEKYMRVVYDDRAR----------------------------AKCNSRFSLLDVAKYFSGIICSQKDAAALRDALDHLPPTRMAAPPATAFKTVLESCEFSIAAWPRR 547          
BLAST of mRNA_F-serratus_M_contig809.19487.1 vs. uniprot
Match: A0A6H5KUA5_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUA5_9PHAE)

HSP 1 Score: 458 bits (1179), Expect = 3.400e-150
Identity = 227/351 (64.67%), Postives = 270/351 (76.92%), Query Frame = 1
Query:  319 EHQRSLDNV----PGVVRRNSSGSKRTGCNFEITVRHAKSAAHPSLTNLKLEHNHVIDGGAMAINMQLGGKLTAAMNAQVEKLAAKGMKPQAVRSVLEALHDE---PVNRRAVQNAVAAETGGERIFDATDVYDEVANQAADGGVCRMKFDDEGRLSHIFWQTREQLSLWNRYGHVALYDDTAVKNRYRMPIGVFAVIDNNFRTRIVGQSITADTTMDTFVWMLKSALESRGGKQPDIFIQDADAAMTGAVRDVFPDAQPRRCLWHLYQNIIKALSKELGSSMHAFMDEFKMVRQQTSMMKFEEKLKALTLKYPKADRYMGVIYEDRKRWAEYVSPLAFSVGSWTTSRVEG 1350
            +HQ S  N     PGV+RRN  GS RTGC FE++VRHAK+   P ++N+KL+HNH +D  A+ + ++L  KLT     QV ++ + GMKP+ V   ++ALH++    +N+RAVQNA A   G E+  DA D Y+EV    ADGGVC +K DD GRL+HI+WQTREQ++LWNRYGHVALYDDTAVKNRYRMP+GV AVID+ +RTRIVGQ ITADTT D  +WMLKSALESRGGKQPDIFIQDADAAMT AVR+VFPDA  RRCLWHL QNIIKAL+K LG  M  FMDEF+ VRQQ S+ KFE K  AL  KYPKA++YM V+Y+DR RWAEYVSPL FSVGSWTTSRVEG
Sbjct:   74 DHQPSAGNAGETAPGVLRRNVKGSARTGCPFEVSVRHAKTHRWPKISNMKLKHNHSVDRNAIDVQLRLASKLTEEQLGQVNQMTSHGMKPKEVTKAMKALHEDGDIDINKRAVQNAAATVHGAEKPRDAADAYEEVLAATADGGVCEIKMDDSGRLTHIWWQTREQVALWNRYGHVALYDDTAVKNRYRMPLGVLAVIDSEYRTRIVGQIITADTTTDALLWMLKSALESRGGKQPDIFIQDADAAMTAAVREVFPDALARRCLWHLNQNIIKALAKVLGGDMKPFMDEFRCVRQQLSLAKFERKFNALIEKYPKAEKYMRVVYDDRARWAEYVSPLMFSVGSWTTSRVEG 424          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig809.19487.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JUZ2_9PHAE1.140e-29461.36SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JNB0_9PHAE2.060e-24952.05SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LU83_ECTSI9.880e-24768.44SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K3E8_9PHAE1.280e-22165.77SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5LMZ3_9PHAE1.410e-22161.57SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JFD7_9PHAE5.210e-18857.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JAS6_9PHAE3.370e-17551.95MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JZ86_9PHAE1.200e-16267.32MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KZF1_9PHAE1.350e-15247.57MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KUA5_9PHAE3.400e-15064.67MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig809contigF-serratus_M_contig809:319685..324850 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score713.0
Seed ortholog evalue1.5e-202
Seed eggNOG ortholog2880.D8LU83
Preferred nameFHY3
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003700,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006355,GO:0007154,GO:0007165,GO:0007602,GO:0007623,GO:0008150,GO:0009314,GO:0009416,GO:0009581,GO:0009582,GO:0009583,GO:0009585,GO:0009605,GO:0009628,GO:0009639,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010017,GO:0010018,GO:0010218,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0023052,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0042752,GO:0042753,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0045893,GO:0045935,GO:0048511,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051606,GO:0051716,GO:0060255,GO:0065007,GO:0071214,GO:0071478,GO:0071482,GO:0071489,GO:0071490,GO:0080090,GO:0104004,GO:0140110,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141
EggNOG free text desc.MULE transposase domain
EggNOG OGs2CMBY@1,2QPXR@2759
Ec32 ortholog descriptionFAR1 DNA binding domain
Ec32 orthologEc-13_003970.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons9
Model size2293
Cds size2292
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932412.5503745-CDS-F-serratus_M_contig809:319685..3206291622932412.5503745-CDS-F-serratus_M_contig809:319685..320629Fucus serratus maleCDSF-serratus_M_contig809 319686..320629 -
1690964296.3683093-CDS-F-serratus_M_contig809:319685..3206291690964296.3683093-CDS-F-serratus_M_contig809:319685..320629Fucus serratus maleCDSF-serratus_M_contig809 319686..320629 -
1622932412.562843-CDS-F-serratus_M_contig809:320956..3211551622932412.562843-CDS-F-serratus_M_contig809:320956..321155Fucus serratus maleCDSF-serratus_M_contig809 320957..321155 -
1690964296.3807988-CDS-F-serratus_M_contig809:320956..3211551690964296.3807988-CDS-F-serratus_M_contig809:320956..321155Fucus serratus maleCDSF-serratus_M_contig809 320957..321155 -
1622932412.578178-CDS-F-serratus_M_contig809:321669..3220231622932412.578178-CDS-F-serratus_M_contig809:321669..322023Fucus serratus maleCDSF-serratus_M_contig809 321670..322023 -
1690964296.391511-CDS-F-serratus_M_contig809:321669..3220231690964296.391511-CDS-F-serratus_M_contig809:321669..322023Fucus serratus maleCDSF-serratus_M_contig809 321670..322023 -
1622932412.591325-CDS-F-serratus_M_contig809:322168..3222611622932412.591325-CDS-F-serratus_M_contig809:322168..322261Fucus serratus maleCDSF-serratus_M_contig809 322169..322261 -
1690964296.3998964-CDS-F-serratus_M_contig809:322168..3222611690964296.3998964-CDS-F-serratus_M_contig809:322168..322261Fucus serratus maleCDSF-serratus_M_contig809 322169..322261 -
1622932412.6122596-CDS-F-serratus_M_contig809:322981..3231241622932412.6122596-CDS-F-serratus_M_contig809:322981..323124Fucus serratus maleCDSF-serratus_M_contig809 322982..323124 -
1690964296.4140596-CDS-F-serratus_M_contig809:322981..3231241690964296.4140596-CDS-F-serratus_M_contig809:322981..323124Fucus serratus maleCDSF-serratus_M_contig809 322982..323124 -
1622932412.62947-CDS-F-serratus_M_contig809:323311..3234681622932412.62947-CDS-F-serratus_M_contig809:323311..323468Fucus serratus maleCDSF-serratus_M_contig809 323312..323468 -
1690964296.4300072-CDS-F-serratus_M_contig809:323311..3234681690964296.4300072-CDS-F-serratus_M_contig809:323311..323468Fucus serratus maleCDSF-serratus_M_contig809 323312..323468 -
1622932412.6456735-CDS-F-serratus_M_contig809:323911..3239701622932412.6456735-CDS-F-serratus_M_contig809:323911..323970Fucus serratus maleCDSF-serratus_M_contig809 323912..323970 -
1690964296.4428098-CDS-F-serratus_M_contig809:323911..3239701690964296.4428098-CDS-F-serratus_M_contig809:323911..323970Fucus serratus maleCDSF-serratus_M_contig809 323912..323970 -
1622932412.661398-CDS-F-serratus_M_contig809:324188..3244261622932412.661398-CDS-F-serratus_M_contig809:324188..324426Fucus serratus maleCDSF-serratus_M_contig809 324189..324426 -
1690964296.4530919-CDS-F-serratus_M_contig809:324188..3244261690964296.4530919-CDS-F-serratus_M_contig809:324188..324426Fucus serratus maleCDSF-serratus_M_contig809 324189..324426 -
1622932412.6828475-CDS-F-serratus_M_contig809:324745..3248501622932412.6828475-CDS-F-serratus_M_contig809:324745..324850Fucus serratus maleCDSF-serratus_M_contig809 324746..324850 -
1690964296.4634092-CDS-F-serratus_M_contig809:324745..3248501690964296.4634092-CDS-F-serratus_M_contig809:324745..324850Fucus serratus maleCDSF-serratus_M_contig809 324746..324850 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig809.19487.1prot_F-serratus_M_contig809.19487.1Fucus serratus malepolypeptideF-serratus_M_contig809 319686..324850 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig809.19487.1

>prot_F-serratus_M_contig809.19487.1 ID=prot_F-serratus_M_contig809.19487.1|Name=mRNA_F-serratus_M_contig809.19487.1|organism=Fucus serratus male|type=polypeptide|length=764bp
QPGGTGAPLPAEGVPAGGVPEQPPPPPLSGGASQQAYNPQTFRGKLEAIE
VEDQTLEEVEEKLRSLCVEEGIIIYIAKSRREHDGTKERVTMKKFLCQRG
GVNRQKEHQRSLDNVPGVVRRNSSGSKRTGCNFEITVRHAKSAAHPSLTN
LKLEHNHVIDGGAMAINMQLGGKLTAAMNAQVEKLAAKGMKPQAVRSVLE
ALHDEPVNRRAVQNAVAAETGGERIFDATDVYDEVANQAADGGVCRMKFD
DEGRLSHIFWQTREQLSLWNRYGHVALYDDTAVKNRYRMPIGVFAVIDNN
FRTRIVGQSITADTTMDTFVWMLKSALESRGGKQPDIFIQDADAAMTGAV
RDVFPDAQPRRCLWHLYQNIIKALSKELGSSMHAFMDEFKMVRQQTSMMK
FEEKLKALTLKYPKADRYMGVIYEDRKRWAEYVSPLAFSVGSWTTSRVEG
QNALIKDKCNARTPLMDAARCFAGLISDQCDTAKLRDAIQHLPPERMAIP
ATTQFKGVLNACEFSIALWPRRFMEQEMGAAMLYCQLGGEELDGPQRAQA
LQRTFEYIEDKLCDVVSLFQVSEERDGQSYIYLVALFSDGSHLCQCRTLQ
TLGLGCRHFWAAMMLSHRFRFNVGLLHEHWLTEKARGTPKENWPSVAKPA
WIAADRHGGAAAGTEGFQGAAANTGGGKWKAFVGRSQTIQTILLDLQEKG
RTVQDKQVCYADVTKTLGLTRSILSDSFPTEVAKDLALEFYNKVRRLAHA
QAGVAGVGGGPQPQ
back to top

mRNA from alignment at F-serratus_M_contig809:319685..324850-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig809.19487.1 ID=mRNA_F-serratus_M_contig809.19487.1|Name=mRNA_F-serratus_M_contig809.19487.1|organism=Fucus serratus male|type=mRNA|length=5166bp|location=Sequence derived from alignment at F-serratus_M_contig809:319685..324850- (Fucus serratus male)
CAGCCTGGAGGGACCGGAGCACCTCTCCCTGCTGAAGGTGTCCCTGCTGG AGGTGTACCTGAGCAGCCCCCCCCACCTCCTCTGAGTGGTGGCGCATCTC AACAGGCGGGTGTGAAACCAAAGACACCTTGCAAATAAATTAATGGGATG TGTTGCAGAAATTACTTGAAGGACTACTACTACTCCTTCTCCATGCCTGT TTCCAGAAGTAGTGGCGGTGTGCGACTGCTGTACCCCGTTCACCGAATAT GTATATGATTACAGCAGCAGTTCTTCAATTAATTTTCCATCTCCCTTTTT TTTGGCATCATGTGGGAGTGGGGATGATAGCTCTGTTGTTACGTGTGTCT GACAACCAACCCTCAAATGTCTTCGTTCTTCTTCGCCTTTATCCTGTCGC ATGCTGTTGCTTGCATTGGGCCAGGCATACAACCCACAGACTTTTCGGGG AAAGTTGGAGGCCATTGAGGTGGAGGACCAAACGTTGGAAGAGGTGGAAG AAAAGCTGCGCAGCTTGTGTGTAGAGGAAGGAATTATCATTTACATCGCC AAGTCGAGGCGAGAGCATGACGGCACGAAGGAGCGTGTCACCATGAAGAA GTTCCTATGTCAGAGAGGCGGGGTTAACCGGCAGAAGGAACACCAACGCT CCCTAGATAATGGTAAGCTTCCCCGGTGTCAAGTCAACAGTTCAGTGTTT CCAGGGATAGTGTATGTGTGTCAGAAGGTATTTCGCTTTGGACGCAAGAA GCGTGTAACAGGCCGCCACGGGCGTAGGGCAAGCCTATGAGCGGCCTGTC TTTCCAGTGTTGCCAATATTGTCTCGGTACTAAAACGATCGTCGGGGTTG CTCTTTGTTTTTTACACCTTGTGTCCGCAGTGCCTGGCGTCGTTCGCCGG AACAGCAGCGGCAGCAAGAGGACAGGGTGCAACTTTGAGGTACATGGGTG AGGGTGTGGGGCCACTGTTGGTGTCGGACGCATCTACGAATACGCGCGCG TTTATTTTTATGTAGAAGGCACACGTGAAGGCACGTACATGACGTACTTG CCCGCTACTTCGCAAAACACGTACGTAGGACACGTATGTAGAGCGTGCGG GTGAATGAAACGAACCCCTCGACGACCACGTTCCGAAAAGGCTTTCGGCT AGTACAGGAGTACCGTCACCTCTGTTGCGGCTATGACAAGGACCCCCGTT TCGAAATTATTCCCACTCGCCCGCCGCCCCCCGGGACAACTCGCTCGACC CACCCCTAATGTCAGGGACTCTAATGTCACCTGAATACAATGAACGACCC CGTTGCCGGTATGTTGTACCTATGTCTCTTTCAGTATCGTAAGCACCTGT CTAACACTAGCCACTAATTTTCACTGAAGCAGATTACCGTGAGGCACGCC AAATCGGCGGCACACCCCTCGTTGACAAACCTGAAGCTCGAGCACAACCA CGTCATCGATGGAGGCGCTATGGCCATCAACATGCAGCTGGGTGGGAAGC TAACAGCGGCGATGAATGCTCAAGTGGAAAAGCTGGCTGGTGAGTAGGGA AGAGCGTGACAGCAGAGTCAGCAGATTGAGGACGTTCTCCTTCACAGCGT ATTCAATGCTCACGAGGGCTCCGGGCCTCACCTAATGTTCGTTAGTTATC TAACCATACACTTTGATACTTCGTATCCCTCTGACATTCACTCCGGAAAT TCTTGCTCTTACCCTTCGCCGCCCAGCTAAAGGCATGAAGCCCCAGGCTG TTCGATCGGTACTGGAGGCGTTGCATGACGAGCCTGTAAATCGTCGCGCT GTCCAAAACGCGGTGGCGGCCGAAACGGGAGGGGAGCGGATATTCGATGC TACCGATGTGTACGACGAGGTATGTACTCAAATGGGAGGTGCCCCCCCCC CTCCCTCTACATTTCTTTTGTTTTCGGAAAGCACACCCCCCGGAGGAAAT CGTGTCGTGGGGGTAGATGGTGTTTTAGTCTGAAACTACCCTGGGGGGTG GGGGTGTGAGGTGGTAGGCAAAGCCCATGTGTTTTCGTCCTCAAAGCCCA TGCCCACGGATGAAGGCCGACAAACACAAACGAACAAACAACCTAACATT GACGCTGGGTCCACAAACGCATGCAACCGCTTAGGGTAAACACCGTCAAA CATGGTAGTGCCGATGCGTTTTATTGACACGCGATGGCAAGGCACGTCGC CTACAAACACATAAAAGTTGTACATGCATGAGATATGGTTGAAAAACAAG ACCAGGCTTCGGGAATCATGTGTTGGAAGGGGTACCTTTTCAAAATTAAT TTCTCCCCCTACGTGTGATGCTGTTCGGCCGAAAAGGGGATGACGCGCGG GGAAAACCTTACAAGGGAAACAATAAGGGGGGGGGCAGACGGGGTAACGG TAGCTTTGGTGGGAAAAATACGAGGGAGCGTTTCCTCCGAGAGAACGAAA TTGGTAGAATACCTGAACACACGCGTGGTAGGTCGTGTCCGATACTGCAT GACCCAGGATAGATTTTTGTGTCGCGCAACCATTACCGCTCAGCATGTGC CCCCATTCGTCTCTACAAATATTTATGAATGTGCGCTAGGTGGCGAACCA AGCGGCGGACGGCGGAGTATGCCGAATGAAGTTTGACGACGAAGGCCGAC TTAGCCATATCTTCTGGCAGACTAGAGAGCAGGTACGTACGGACATGCGC AGCAGTCGTACATTGCAAGCAGCAACCAGTGTCCCGCCGCCTTTGTTACG GTTCGAGACCGACAGATGCAACCAATTGAAACAAAAATAATTGAAATCAA AATGTGTATCGTCAACCACGTACGCAGTTGTCCCTCTGGAATCGATATGG GCATGTGGCGCTCTACGACGACACGGCCGTGAAAAACCGGTACCGTATGC CCATCGGTGTGTTCGCCGTCATCGATAATAACTTCCGGACGCGTATCGTG GGCCAATCCATCACAGCGGACACGACAATGGACACCTTTGTGTGGATGTT GAAGAGCGCCCTGGAATCCCGTGGCGGCAAGCAGCCGGATATATTCATCC AGGATGCGGACGCTGCTATGACGGGGGCGGTCCGCGATGTATTCCCGGAC GCGCAGCCGAGGCGTTGCTTGTGGCACCTCTACCAGAACATCATCAAAGC CCTCTCGAAAGAATTGGGCTCGAGCATGCATGTGAGACTCGAGTGTTTAT CGGTACACGTCGTTGATGTGAACGTTGTTGATATTGATGGACCGTGCGTC GGTCGCATAAGGTATTACACCCCCCTTCGATATGAAACCCCCTTACCCTC CCCCAACCAACCACCAACCCGGGTGATACTTGGTTGACACCCACACTCGG TGGCCGGTTTATATCACGGGTCGCAGTAGACACCATGCCCCCTAAGTTGC ACCGTAACTTGTTCGTGTTTTTCTATTGTCCCCGAGTCGGAGCGGTGGGC TCTTTATTTGTCCATTTTCCCTGTGTTGTTTTGGATAGAGTAGTACTGCT GTAACCGAACATATTTCCTGAAAGGTTGGCAAGGAGTACCGTACACTTCC AAATATCAATACTGCTGTAACGGTACACTTCCCATATTGTTGTCTCCCGC AACCCATTAGCATACACACCACGCATTTCGTGTTTGACCGTTCGACATGC TCAACGTTGCCCGGCACCTAACTTTCTTTGGTTGTTGACCCACAGGCGTT CATGGACGAGTTCAAGATGGTTCGCCAGCAGACGTCGATGATGAAGTTCG AGGAGAAGCTAAAGGCCCTCACCCTGAAATATCCCAAGGCAGACCGGTAC ATGGGGGTGATCTACGAAGACCGGAAACGGTGGGCCGAGTACGTGTCCCC GCTGGCCTTCTCTGTTGGTTCGTGGACAACGTCCAGAGTTGAAGGTGTGT TTCTTAAGTGTCCGTTTGTTTTCCGAAGGCCCATGCCCTACTTCATCCCT GATTGATCGTGACTGTTTGTATCGTGCGTGAATCGATTGAGCAGCACACA TTTATATGCGCGCTGGAATGGGCACGGGTTTGGGTGTTATTGCTTTTGTG CGTCGCACTTGTCATCCAGTTGATGGGCGTCTATTGTCCCTTAGATGTAA TTAGATGTAATCGCTGAACACCAACAGCTAACGTCCGTACGCCCCCCCCT ATACCCCCCTCCCCCCCCCTACTGCCGTTGGTTTTATGGCTGCGCTAATC GCTCGCTCCGTACCCTTGCAGGGCAGAACGCGCTGATCAAGGACAAGTGC AATGCTCGCACACCTCTCATGGACGCGGCCAGGTGCTTCGCGGGGCTCAT CAGCGACCAGTGCGATACCGCCAAACTCCGCGACGCCATTCAACACTTGC CACCTGAACGAATGGCTATTCCGGCGACGACCCAGTTCAAGGGTGTGCTC AACGCCTGCGAGTTTTCTATCGCCCTGTGGCCACGGCGGTTCATGGAGCA AGAGATGGGCGCAGCGATGCTGTACTGCCAACTGGGCGGGGAGGAGCTCG ATGGCCCGCAGCGCGCCCAAGCCTTGCAGCGCACTTTCGAGTACATCGAG GACAAGCTGTGCGACGTAGTCTCCCTCTTCCAAGTGTCCGAGGAACGCGA CGGCCAGTCCTACATCTACCTCGTCGCGCTCTTCTCCGACGGCAGCCACT TGTGTCAGTGCCGCACGCTCCAGACCCTCGGTCTGGGCTGCCGCCATTTC TGGGCTGCGATGATGCTTTCCCATCGCTTCCGCTTCAACGTCGGACTCCT GCACGAGCACTGGCTGACGGAGAAAGCCAGGGGCACACCAAAGGAAAATT GGCCATCCGTCGCGAAGCCTGCATGGATCGCGGCTGATCGCCACGGGGGG GCAGCCGCAGGAACGGAAGGCTTCCAAGGAGCAGCCGCGAACACAGGCGG CGGGAAGTGGAAGGCCTTCGTGGGGCGCAGCCAGACGATCCAGACGATTC TTCTAGACCTGCAGGAGAAGGGCCGAACCGTACAGGATAAACAAGTGTGC TACGCTGATGTTACCAAGACACTCGGACTCACACGCAGTATTTTGTCTGA TAGTTTCCCGACAGAAGTCGCCAAAGACCTGGCGCTCGAGTTTTACAACA AAGTCCGCCGTCTCGCACATGCGCAGGCTGGGGTGGCCGGGGTTGGAGGA GGGCCACAGCCGCAGA
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig809:319685..324850-

>mRNA_F-serratus_M_contig809.19487.1 ID=mRNA_F-serratus_M_contig809.19487.1|Name=mRNA_F-serratus_M_contig809.19487.1|organism=Fucus serratus male|type=CDS|length=4584bp|location=Sequence derived from alignment at F-serratus_M_contig809:319685..324850- (Fucus serratus male)
CAGCCTGGAGGGACCGGAGCACCTCTCCCTGCTGAAGGTGTCCCTGCTGG
AGGTGTACCTGAGCAGCCCCCCCCACCTCCTCTGAGTGGTGGCGCATCTC
AACAGCAGCCTGGAGGGACCGGAGCACCTCTCCCTGCTGAAGGTGTCCCT
GCTGGAGGTGTACCTGAGCAGCCCCCCCCACCTCCTCTGAGTGGTGGCGC
ATCTCAACAGGCATACAACCCACAGACTTTTCGGGGAAAGTTGGAGGCCA
TTGAGGTGGAGGACCAAACGTTGGAAGAGGTGGAAGAAAAGCTGCGCAGC
TTGTGTGTAGAGGAAGGAATTATCATTTACATCGCCAAGTCGAGGCGAGA
GCATGACGGCACGAAGGAGCGTGTCACCATGAAGAAGTTCCTATGTCAGA
GAGGCGGGGTTAACCGGCAGAAGGAACACCAACGCTCCCTAGATAATGGC
ATACAACCCACAGACTTTTCGGGGAAAGTTGGAGGCCATTGAGGTGGAGG
ACCAAACGTTGGAAGAGGTGGAAGAAAAGCTGCGCAGCTTGTGTGTAGAG
GAAGGAATTATCATTTACATCGCCAAGTCGAGGCGAGAGCATGACGGCAC
GAAGGAGCGTGTCACCATGAAGAAGTTCCTATGTCAGAGAGGCGGGGTTA
ACCGGCAGAAGGAACACCAACGCTCCCTAGATAATGTGCCTGGCGTCGTT
CGCCGGAACAGCAGCGGCAGCAAGAGGACAGGGTGCAACTTTGAGTGCCT
GGCGTCGTTCGCCGGAACAGCAGCGGCAGCAAGAGGACAGGGTGCAACTT
TGAGATTACCGTGAGGCACGCCAAATCGGCGGCACACCCCTCGTTGACAA
ACCTGAAGCTCGAGCACAACCACGTCATCGATGGAGGCGCTATGGCCATC
AACATGCAGCTGGGTGGGAAGCTAACAGCGGCGATGAATGCTCAAGTGGA
AAAGCTGGCTGATTACCGTGAGGCACGCCAAATCGGCGGCACACCCCTCG
TTGACAAACCTGAAGCTCGAGCACAACCACGTCATCGATGGAGGCGCTAT
GGCCATCAACATGCAGCTGGGTGGGAAGCTAACAGCGGCGATGAATGCTC
AAGTGGAAAAGCTGGCTGCTAAAGGCATGAAGCCCCAGGCTGTTCGATCG
GTACTGGAGGCGTTGCATGACGAGCCTGTAAATCGTCGCGCTGTCCAAAA
CGCGGTGGCGGCCGAAACGGGAGGGGAGCGGATATTCGATGCTACCGATG
TGTACGACGAGCTAAAGGCATGAAGCCCCAGGCTGTTCGATCGGTACTGG
AGGCGTTGCATGACGAGCCTGTAAATCGTCGCGCTGTCCAAAACGCGGTG
GCGGCCGAAACGGGAGGGGAGCGGATATTCGATGCTACCGATGTGTACGA
CGAGGTGGCGAACCAAGCGGCGGACGGCGGAGTATGCCGAATGAAGTTTG
ACGACGAAGGCCGACTTAGCCATATCTTCTGGCAGACTAGAGAGCAGGTG
GCGAACCAAGCGGCGGACGGCGGAGTATGCCGAATGAAGTTTGACGACGA
AGGCCGACTTAGCCATATCTTCTGGCAGACTAGAGAGCAGTTGTCCCTCT
GGAATCGATATGGGCATGTGGCGCTCTACGACGACACGGCCGTGAAAAAC
CGGTACCGTATGCCCATCGGTGTGTTCGCCGTCATCGATAATAACTTCCG
GACGCGTATCGTGGGCCAATCCATCACAGCGGACACGACAATGGACACCT
TTGTGTGGATGTTGAAGAGCGCCCTGGAATCCCGTGGCGGCAAGCAGCCG
GATATATTCATCCAGGATGCGGACGCTGCTATGACGGGGGCGGTCCGCGA
TGTATTCCCGGACGCGCAGCCGAGGCGTTGCTTGTGGCACCTCTACCAGA
ACATCATCAAAGCCCTCTCGAAAGAATTGGGCTCGAGCATGCATTTGTCC
CTCTGGAATCGATATGGGCATGTGGCGCTCTACGACGACACGGCCGTGAA
AAACCGGTACCGTATGCCCATCGGTGTGTTCGCCGTCATCGATAATAACT
TCCGGACGCGTATCGTGGGCCAATCCATCACAGCGGACACGACAATGGAC
ACCTTTGTGTGGATGTTGAAGAGCGCCCTGGAATCCCGTGGCGGCAAGCA
GCCGGATATATTCATCCAGGATGCGGACGCTGCTATGACGGGGGCGGTCC
GCGATGTATTCCCGGACGCGCAGCCGAGGCGTTGCTTGTGGCACCTCTAC
CAGAACATCATCAAAGCCCTCTCGAAAGAATTGGGCTCGAGCATGCATGC
GTTCATGGACGAGTTCAAGATGGTTCGCCAGCAGACGTCGATGATGAAGT
TCGAGGAGAAGCTAAAGGCCCTCACCCTGAAATATCCCAAGGCAGACCGG
TACATGGGGGTGATCTACGAAGACCGGAAACGGTGGGCCGAGTACGTGTC
CCCGCTGGCCTTCTCTGTTGGTTCGTGGACAACGTCCAGAGTTGAAGGCG
TTCATGGACGAGTTCAAGATGGTTCGCCAGCAGACGTCGATGATGAAGTT
CGAGGAGAAGCTAAAGGCCCTCACCCTGAAATATCCCAAGGCAGACCGGT
ACATGGGGGTGATCTACGAAGACCGGAAACGGTGGGCCGAGTACGTGTCC
CCGCTGGCCTTCTCTGTTGGTTCGTGGACAACGTCCAGAGTTGAAGGGCA
GAACGCGCTGATCAAGGACAAGTGCAATGCTCGCACACCTCTCATGGACG
CGGCCAGGTGCTTCGCGGGGCTCATCAGCGACCAGTGCGATACCGCCAAA
CTCCGCGACGCCATTCAACACTTGCCACCTGAACGAATGGCTATTCCGGC
GACGACCCAGTTCAAGGGTGTGCTCAACGCCTGCGAGTTTTCTATCGCCC
TGTGGCCACGGCGGTTCATGGAGCAAGAGATGGGCGCAGCGATGCTGTAC
TGCCAACTGGGCGGGGAGGAGCTCGATGGCCCGCAGCGCGCCCAAGCCTT
GCAGCGCACTTTCGAGTACATCGAGGACAAGCTGTGCGACGTAGTCTCCC
TCTTCCAAGTGTCCGAGGAACGCGACGGCCAGTCCTACATCTACCTCGTC
GCGCTCTTCTCCGACGGCAGCCACTTGTGTCAGTGCCGCACGCTCCAGAC
CCTCGGTCTGGGCTGCCGCCATTTCTGGGCTGCGATGATGCTTTCCCATC
GCTTCCGCTTCAACGTCGGACTCCTGCACGAGCACTGGCTGACGGAGAAA
GCCAGGGGCACACCAAAGGAAAATTGGCCATCCGTCGCGAAGCCTGCATG
GATCGCGGCTGATCGCCACGGGGGGGCAGCCGCAGGAACGGAAGGCTTCC
AAGGAGCAGCCGCGAACACAGGCGGCGGGAAGTGGAAGGCCTTCGTGGGG
CGCAGCCAGACGATCCAGACGATTCTTCTAGACCTGCAGGAGAAGGGCCG
AACCGTACAGGATAAACAAGTGTGCTACGCTGATGTTACCAAGACACTCG
GACTCACACGCAGTATTTTGTCTGATAGTTTCCCGACAGAAGTCGCCAAA
GACCTGGCGCTCGAGTTTTACAACAAAGTCCGCCGTCTCGCACATGCGCA
GGCTGGGGTGGCCGGGGTTGGAGGAGGGCCACAGCCGCAGGGCAGAACGC
GCTGATCAAGGACAAGTGCAATGCTCGCACACCTCTCATGGACGCGGCCA
GGTGCTTCGCGGGGCTCATCAGCGACCAGTGCGATACCGCCAAACTCCGC
GACGCCATTCAACACTTGCCACCTGAACGAATGGCTATTCCGGCGACGAC
CCAGTTCAAGGGTGTGCTCAACGCCTGCGAGTTTTCTATCGCCCTGTGGC
CACGGCGGTTCATGGAGCAAGAGATGGGCGCAGCGATGCTGTACTGCCAA
CTGGGCGGGGAGGAGCTCGATGGCCCGCAGCGCGCCCAAGCCTTGCAGCG
CACTTTCGAGTACATCGAGGACAAGCTGTGCGACGTAGTCTCCCTCTTCC
AAGTGTCCGAGGAACGCGACGGCCAGTCCTACATCTACCTCGTCGCGCTC
TTCTCCGACGGCAGCCACTTGTGTCAGTGCCGCACGCTCCAGACCCTCGG
TCTGGGCTGCCGCCATTTCTGGGCTGCGATGATGCTTTCCCATCGCTTCC
GCTTCAACGTCGGACTCCTGCACGAGCACTGGCTGACGGAGAAAGCCAGG
GGCACACCAAAGGAAAATTGGCCATCCGTCGCGAAGCCTGCATGGATCGC
GGCTGATCGCCACGGGGGGGCAGCCGCAGGAACGGAAGGCTTCCAAGGAG
CAGCCGCGAACACAGGCGGCGGGAAGTGGAAGGCCTTCGTGGGGCGCAGC
CAGACGATCCAGACGATTCTTCTAGACCTGCAGGAGAAGGGCCGAACCGT
ACAGGATAAACAAGTGTGCTACGCTGATGTTACCAAGACACTCGGACTCA
CACGCAGTATTTTGTCTGATAGTTTCCCGACAGAAGTCGCCAAAGACCTG
GCGCTCGAGTTTTACAACAAAGTCCGCCGTCTCGCACATGCGCAGGCTGG
GGTGGCCGGGGTTGGAGGAGGGCCACAGCCGCAG
back to top