prot_F-serratus_M_contig126.1947.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig126.1947.1
Unique Nameprot_F-serratus_M_contig126.1947.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length272
Homology
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BLAST of mRNA_F-serratus_M_contig126.1947.1 vs. uniprot
Match: D8LJV4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJV4_ECTSI)

HSP 1 Score: 279 bits (713), Expect = 3.800e-91
Identity = 170/232 (73.28%), Postives = 182/232 (78.45%), Query Frame = 0 
Query:   42 MLSSVLKGYKPTFTYGSIFTGFAVDRVPLHKADEVRLDNRVLKVVENRVVSALSKELLIETLQTKYTVVNRETGELYDVREIDNSMPYRYSVLPHDMRVPSKARQLLGINEQQTHVPPKAAKVFGHNXXXXXXXARDGHISDKAAQVLGVILPSSEGRNEASDEHEGRGSHRRAGAGMGRESRGGAPNIVEDEVPAEWSLGRRESMEDDEGM--LESKARGGAFSESQRPAE 271
            MLSSVLKGYKPTFTY SIFTGFAVDRVP+ KADE+RLDNRVLKVVENRVVSALSKELLIETLQTKYTVVNR+TGELYDVREID SMPYRYSVLPH+MRVPSKARQLLGINEQ THVPPKAAKVFGHNXXXXXXX  DG+I+DKAAQVLGVI P S G         G G +RR   G G   RG     VE+E  A+W     +SM DD+GM  L +  RG     SQRPAE
Sbjct:    1 MLSSVLKGYKPTFTYSSIFTGFAVDRVPMQKADEIRLDNRVLKVVENRVVSALSKELLIETLQTKYTVVNRDTGELYDVREIDTSMPYRYSVLPHNMRVPSKARQLLGINEQPTHVPPKAAKVFGHNXXXXXXXXXDGNITDKAAQVLGVI-PQSAGAGG-----RGGGGYRRPHVGRG--PRG----TVEEEDDADWGE-PLDSMGDDDGMGMLHAHGRGVYMGSSQRPAE 219
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BLAST of mRNA_F-serratus_M_contig126.1947.1 vs. uniprot
Match: A0A835ZJ29_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ29_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 7.660e-17
Identity = 48/83 (57.83%), Postives = 61/83 (73.49%), Query Frame = 0 
Query:   21 GEKRIPESYIVILQPTVTPYEMLSSVLKGYKPTFTYGSIFTGFAVDRVPLHKADEVRLDNRVLKVVENRVVSALSKELLIETL 103
            G     ++YIVILQPTV P E+L++VLKG+KP F YG+IF GF+VDR+      EVRLD RVL VVE+R    LS+E+L+ETL
Sbjct:   19 GSAATADNYIVILQPTVKPDEILNTVLKGHKPGFVYGTIFVGFSVDRLVPLLVLEVRLDPRVLTVVEDRASMGLSREVLMETL 101
[Close]
BLAST of mRNA_F-serratus_M_contig126.1947.1 vs. uniprot
Match: A0A835ZFK3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFK3_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 1.170e-13
Identity = 35/54 (64.81%), Postives = 44/54 (81.48%), Query Frame = 0 
Query:  114 TGELYDVREIDNSMPYRYSVLPHDMRVPSKARQLLGINEQQTHVPPKAAKVFGH 167
            TGELYDVRE+D + PYRYS+LP ++RVP KAR +LGIN ++T V  KAA+V GH
Sbjct:    1 TGELYDVRELDGTAPYRYSILPSNLRVPRKARDILGINHKKTRVHSKAARVMGH 54
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig126.1947.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LJV4_ECTSI3.800e-9173.28Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZJ29_9STRA7.660e-1757.83Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A835ZFK3_9STRA1.170e-1364.81Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig126contigF-serratus_M_contig126:289399..296271 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig126.1947.1mRNA_F-serratus_M_contig126.1947.1Fucus serratus malemRNAF-serratus_M_contig126 289196..296271 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig126.1947.1 ID=prot_F-serratus_M_contig126.1947.1|Name=mRNA_F-serratus_M_contig126.1947.1|organism=Fucus serratus male|type=polypeptide|length=272bp
MAGPRSRASRPQRPPPSMAVGEKRIPESYIVILQPTVTPYEMLSSVLKGY
KPTFTYGSIFTGFAVDRVPLHKADEVRLDNRVLKVVENRVVSALSKELLI
ETLQTKYTVVNRETGELYDVREIDNSMPYRYSVLPHDMRVPSKARQLLGI
NEQQTHVPPKAAKVFGHNPYRHHVTARDGHISDKAAQVLGVILPSSEGRN
EASDEHEGRGSHRRAGAGMGRESRGGAPNIVEDEVPAEWSLGRRESMEDD
EGMLESKARGGAFSESQRPAEG
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