prot_F-serratus_M_contig809.19484.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig809.19484.1
Unique Name	prot_F-serratus_M_contig809.19484.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	838

Homology

[Close]

BLAST of mRNA_F-serratus_M_contig809.19484.1 vs. uniprot
Match: A0A6H5JEX6_9PHAE (PseudoU_synth_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEX6_9PHAE)

HSP 1 Score: 659 bits (1700), Expect = 2.430e-224
Identity = 414/729 (56.79%), Postives = 474/729 (65.02%), Query Frame = 0

Query:  159 PVSARGQSWRDKQQLKK-QXXXXXXXXXXXXXKPGKKKRGAEREFDHSRWRRRTVAVQLMYEGEGYAGFCSQASDYHLTDRKDDVDTIERRLFHALTTTKLVDNITTGENYSRCGRTDRGVSALGNVITVSVRSNFPKDL-HVDLPTSPLGSLRI-----PNGTTGNSHGSDGGDDANCRGNPGGKQVRGQ------GGDVAVRAAKAGSVDGSPGVAR----SARDYVGRESTGE--RSVDAEGS-------------------------------------------RESGXXXXXXXXXXXXXXXKTKKRMARTGARVTEIDYCGILNRVLPPDIRALAWAPVTEDFSARFSCSDRTYRYFFLARDLDIKAMDAAASRIVGEHDFRNLCKIDVANVSNFVRHVKHASVRPVPSPS----ADYGGT-------EYYRICVFEVCGQAFLWHMVRCLMSVLFMVGRGHESPEIMSFLMDLERCPAKPHYDMAPDGPLLLHACRFRSLRFRYTPENLYCLQDHLENLWQEAAIKAARLLNNLDYLSGTRVTVKASCADLDAFVTIKRTMKGANIEHHSVRDHGLEGQRREXXXXXXXXXXXXXQAELNGFPAQSDVPEGRRGTDSATKAVDAGGRDERQGCNGEGGDEELTWKEALARMRQMGLGPGQVLGRKGHMPMARRQQSLNYNELVQGLGGKKRERLDRHLKMKTEGHMSGETDAFYEAMQLQG 814
            P   RG SWR+KQ+ K  +XXXXXXXXXXXX +  KK  G +R+FDH+RWR+RTVAVQLMYEG GYAGFCSQ+            DTIE+ LF ALTTTKLV++I TG+NYSRCGRTDRGVSALGNVITVS+RS FPK +   DLPTSPLGSL +     P     +   +DGG     +  P G     Q      G D     AK  S +G P  +R     A D       GE  R   A G+                                               XXXXXXXXXXXXXXX         G  +TEIDYCGILNRVLPP IRALAWAPVTE FSARFSCSDRTYRYFF+ARD++IKAM+ AAS+IVG HDFRNLCKIDVANVSNFVRH+KHASVRPV SPS    +D+ GT       EYYR+CVFEVCGQAFLWHMVRCLM+VLFMVGRG ESP++MSFL+D+ERCP KPHYDMAPDGPLLLH CRFRSL F+YTPENLYCLQ+HLE+LW++AAI AARLLNNL+YL+G  ++ K    DLDAF   K  +KG+N +H+SV DHG +G+RRE               +            G  G    T+  +           G GGDE +TW+E L R+R MGLG GQVLGRKGHMPM RRQQ L+YNELV+GLGGKKRERLDRHL MK  G  SGETDAFY AM  QG
Sbjct:   66 PQGPRGLSWREKQRQKAAEXXXXXXXXXXXXGRKSKKGAGQQRDFDHARWRKRTVAVQLMYEGGGYAGFCSQSEGNE--------DTIEKHLFRALTTTKLVESIATGDNYSRCGRTDRGVSALGNVITVSMRSKFPKHVPDADLPTSPLGSLWVAPIAPPQNAAKSVGENDGGFKRESQTMPEGSAAAEQEQPAAGGADEGSGLAKGKSSEGCPSDSRHPASGASDPCTAPGGGEVGRGEVASGNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGEITEIDYCGILNRVLPPGIRALAWAPVTEGFSARFSCSDRTYRYFFMARDMNIKAMNEAASKIVGSHDFRNLCKIDVANVSNFVRHIKHASVRPVQSPSPSNTSDHEGTARGEEEEEYYRVCVFEVCGQAFLWHMVRCLMAVLFMVGRGLESPDVMSFLLDMERCPGKPHYDMAPDGPLLLHGCRFRSLNFQYTPENLYCLQEHLESLWEDAAITAARLLNNLEYLAGVTISAK----DLDAFAAFKHALKGSNDQHYSVVDHGEQGRRRE---------------KXXXXXXXXXXXXGGTGDSQGTRPGEE--------TAGRGGDENMTWREGLRRLRGMGLGVGQVLGRKGHMPMERRQQGLHYNELVEGLGGKKRERLDRHLAMKAAGMESGETDAFYNAMADQG 759

[Close]

BLAST of mRNA_F-serratus_M_contig809.19484.1 vs. uniprot
Match: D7FHT9_ECTSI (tRNA pseudouridine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHT9_ECTSI)

HSP 1 Score: 304 bits (779), Expect = 1.360e-94
Identity = 158/276 (57.25%), Postives = 184/276 (66.67%), Query Frame = 0

Query:  539 MVRCLMSVLFMVGRGHESPEIMSFLMDLERCPAKPHYDMAPDGPLLLHACRFRSLRFRYTPENLYCLQDHLENLWQEAAIKAARLLNNLDYLSGTRVTVKASCADLDAFVTIKRTMKGANIEHHSVRDHGLEGQRREXXXXXXXXXXXXXQAELNGFPAQSDVPEGRRGTDSATKAVDAGGRDERQGCNGEGGDEELTWKEALARMRQMGLGPGQVLGRKGHMPMARRQQSLNYNELVQGLGGKKRERLDRHLKMKTEGHMSGETDAFYEAMQLQG 814
            MVRCLM+VLFMVGRG ESP++MSFL+D+ERCP KPHYDMAPDGPLLLH CRFRSL F+YTPENLYCLQ+HLE+LW++AAI AARLLNNL+YL+G  V+ K    DLDAF   KR +KG+N +H+SV DHG +G+R++                                                           +TW+E L R+R MGLG GQVLGRKGHMPM RRQQ L+YNELV+GLGGKKRERLDRHL MK  G  SGETDAFY AM  QG
Sbjct:    1 MVRCLMAVLFMVGRGLESPDVMSFLLDMERCPGKPHYDMAPDGPLLLHGCRFRSLNFQYTPENLYCLQEHLESLWEDAAITAARLLNNLEYLAGVTVSAK----DLDAFAAFKRALKGSNDQHYSVVDHGEQGRRQD-----------------------------------------------------------MTWREGLRRLRDMGLGVGQVLGRKGHMPMERRQQGLHYNELVEGLGGKKRERLDRHLAMKAAGVESGETDAFYNAMADQG 213

[Close]

BLAST of mRNA_F-serratus_M_contig809.19484.1 vs. uniprot
Match: A0A7S3H897_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H897_9STRA)

HSP 1 Score: 273 bits (697), Expect = 1.570e-77
Identity = 212/637 (33.28%), Postives = 303/637 (47.57%), Query Frame = 0

Query:  202 FDHSRWRRRTVAVQLMYEGEGYAGFCSQASDYHLTDRKDDVDTIERRLFHALTTTKLVDNITTGENYSRCGRTDRGVSALGNVITVSVRSNFPKDLHVDLPTSPLGSLRIPNGTTGNSHGSDGGDDANCRGNPGGKQVRGQGGDVAVRAAKAGSVDGSPGVARSARDYVGRESTGERSV-DAEGSRESGXXXXXXXXXXXXXXXKTKKRMARTGARVTEIDYCGILNRVLPPDIRALAWAPVTEDFSARFSCSDRTYRYFFLARDLDIKAMDAAASRIVGEHDFRNLCKIDVANVSNFVRHVKHASVRPVP--------------SPSADYGGT------EYYRICVFEVCGQAFLWHMVRCLMSVLFMVGRGHESPEIMSFLMDLERCPAKPHYDMAPDGPLLLHACRFRSLRFRYTPENLYCLQDHLENLWQEAAIKAARLLNNLDYLSGTRVTVKASCADLDAFVTIKRTMKGANIEHHSVRDHGLEGQRREXXXXXXXXXXXXXQAELNGFPAQSDVPEGRRGTDSATKAVDAGGRDERQGCNGEGGDEELTWKEALARMR-QMGLGPGQVLGRKGHMPMARRQQSLNYNELVQGLGGKKRERLDRHLKMKTEGHMSGETDAFYEAMQLQGTL 816
            F  S++R R +A+Q+ Y+G  Y GF SQ  +          +T+E  LF+AL   KL+++  T + YSRCGRTD+GVSALG VI+V+VRS  P+DL    P   L  LR P G                              ++   AA   +       A  A D  G+E   ++S  +A     +G               KTK         +TE+DY  +LNR LP DIR L W  VTE+FSARFS SDR YRYFF  + L+I AM  AA+ ++G HDFRNLCK+D+ANV+NF R +  A ++                 S S  Y  +      E   + + E+ G AFLWHMVRC+M+VLFMVG G E PE++  L+D+E C  KP Y +A + PL+LH C F +LR    P +L+ L  H E + +   + AAR+ N+L+ +  + V  K   A+    +  K T       + +        Q+R                   G P  +                     D     NG G  EE+ WK+ L R++    L P  +     H+P+ +R+Q  +Y   V  L G K+ERL+RH+++      +G T  F++ M+ QG+L
Sbjct:   78 FSLSKYRTRQIAMQVQYDGSAYLGFASQDLE----------ETVENHLFNALLKLKLIEDRKTCQ-YSRCGRTDKGVSALGQVISVNVRSALPRDL----PEEALVVLRNPTGKY----------------------------EITEPAAVNSTSSAGNSTAEQA-DNSGKEPPRKKSKKNATSDTPAGP--------------KTKI--------ITEMDYVTMLNRTLPDDIRILGWCEVTEEFSARFSASDRKYRYFFPRKTLNIAAMQQAATYLLGNHDFRNLCKMDIANVTNFRRDIYSAEIKKFEPNRYEDLYSIVHGTSNSDTYSSSTTDVVDEPDTMYMLEIKGIAFLWHMVRCIMAVLFMVGEGLEQPEVVKRLLDIEHCIGKPPYTLANEFPLVLHECGFDNLRIPRQPRHLWQLTAHYERILEGHLVSAARVRNSLELVKKS-VVGKEEVAEFVEVLVEKETFSAKRAGYQNATF-----QQRA------------------GLPITAAATXXXXXXXXXXXXXXXXXXD-----NGTG--EEVVWKDVLERVKCDWNLQP--IEKYIPHVPLMQRRQEDSYELKVALLAGGKKERLERHVELSATAATTGATPLFFQKMRQQGSL 615

[Close]

BLAST of mRNA_F-serratus_M_contig809.19484.1 vs. uniprot
Match: A0A7K4JSW7_GEOCA (PUS3 synthase (Fragment) n=2 Tax=Cuculiformes TaxID=8940 RepID=A0A7K4JSW7_GEOCA)

HSP 1 Score: 265 bits (676), Expect = 4.070e-77
Identity = 174/441 (39.46%), Postives = 222/441 (50.34%), Query Frame = 0

Query:  191 PGKKKRGAEREFDHSRWRRRTVAVQLMYEGEGYAGFCSQASDYHLTDRKDDVDTIERRLFHALTTTKLVDNITTGENYSRCGRTDRGVSALGNVITVSVRSNFPKDLHVDLPTSPLGSLRIPNGTTGNSHGSDGGDDANCRGNPGGKQVRGQGGDVAVRAAKAGSVDGSPGVARSARDYVGRESTGERSVDAEGSRESGXXXXXXXXXXXXXXXKTKKRMARTGARVTEIDYCGILNRVLPPDIRALAWAPVTEDFSARFSCSDRTYRYFFLARDLDIKAMDAAASRIVGEHDFRNLCKIDVAN-VSNFVRHVKHASVRPVPSPSADYGGTEYYRICVFEVCGQAFLWHMVRCLMSVLFMVGRGHESPEIMSFLMDLERCPAKPHYDMAPDGPLLLHACRFRSLRFRYTPENLYCLQDHLENLWQEAAIKAARLLNNLDYL 630
            PGK K+G +R FD S + RR VA+++ Y G GY GF SQ +  +         TIE +LF AL  T+LVDN  T  NY RCGRTD+GVSA G VI++ +RSN  +                                        GK++                               G E T E   ++E                                   E+ Y  ILNRVLPPDIR LAWAPV  DFSARFSC  RTYRYFF   D+D+  M AAA R VG HDFRNLCK+DVAN V NF R +  ASV  V +   + G  + +R+C FEV GQAFL+H VRC+M++LF++G+  ESPEI++ L+D+E+ P KP Y MA + PL+LH C F +L++ Y  E       HL+ LW   A+K   L N L  L
Sbjct:   47 PGKAKKGQQRPFDFSAYGRRHVALKIAYLGWGYQGFASQENTSN---------TIEEKLFEALKKTRLVDNRQTS-NYHRCGRTDKGVSAFGQVISLDLRSNLSE----------------------------------------GKKLN------------------------------GHEGTSEGKSESE-----------------------------------ELRYTHILNRVLPPDIRVLAWAPVEPDFSARFSCLKRTYRYFFPCADMDVALMHAAAQRYVGTHDFRNLCKMDVANGVVNFQRTILSASVTWVEA-GGETGLQDPFRLCQFEVTGQAFLYHQVRCMMAILFLIGQRMESPEIINELLDVEKNPQKPQYSMAVEFPLVLHDCEFENLQWLYDREVQEFNVRHLQQLWANHAVKTQVLRNMLQGL 371

[Close]

BLAST of mRNA_F-serratus_M_contig809.19484.1 vs. uniprot
Match: A0A7E6CV69_9CHIR (tRNA pseudouridine(38/39) synthase isoform X2 n=2 Tax=Phyllostomus discolor TaxID=89673 RepID=A0A7E6CV69_9CHIR)

HSP 1 Score: 265 bits (676), Expect = 6.340e-77
Identity = 178/479 (37.16%), Postives = 236/479 (49.27%), Query Frame = 0

Query:  198 AEREFDHSRWRRRTVAVQLMYEGEGYAGFCSQASDYHLTDRKDDVDTIERRLFHALTTTKLVDNITTGENYSRCGRTDRGVSALGNVITVSVRSNFPKDLHVDLPTSPLGSLRIPNGTTGNSHGSDGGDDANCRGNPGGKQVRGQGGDVAVRAAKAGSVDGSPGVARSARDYVGRESTGERSVDAEGSRESGXXXXXXXXXXXXXXXKTKKRMARTGARVTEIDYCGILNRVLPPDIRALAWAPVTEDFSARFSCSDRTYRYFFLARDLDIKAMDAAASRIVGEHDFRNLCKIDVAN-VSNFVRHVKHASVRPVPSPSADYGGTEYYRICVFEVCGQAFLWHMVRCLMSVLFMVGRGHESPEIMSFLMDLERCPAKPHYDMAPDGPLLLHACRFRSLRFRYTPENLYCLQDHLENLWQEAAIKAARLLNNLDYLSGTRVTVKASCADLDAFVTIKRTMKGANIEHHSVRDHGLEGQRRE 675
            A+REFD S   RR VA+++ Y G GY GF SQ +  +         TIE +LF ALT T+LV++  T  NY RCGRTD+GVSA G VI++ +RS+FPKD                           G +D N                             + GV+ +A+                                                   EI Y  ILNRVLPPDIR LAWAPV   FSARFSC +RTYRYFF   DLDI  M+ AA + VG HDFRNLCK+DVAN V NF R +  A V+ V    A+ G  E +++C FEV GQAFL+H VRC+M+VLF++G+G E PEI+  L+++E+ P KP Y MA + PL+L+ C+F ++++ Y  E       HL+  W   A+K   L + L  L    V      A   A         G   ++H ++ HG E +R+E
Sbjct:   50 AKREFDFSAHGRRHVALKIAYLGWGYQGFASQENTNN---------TIEEKLFEALTKTRLVESRQTS-NYHRCGRTDKGVSAFGQVISLDLRSHFPKDR--------------------------GSEDFNV----------------------------TDGVSDAAK---------------------------------------------------EIRYTHILNRVLPPDIRVLAWAPVEPGFSARFSCLERTYRYFFPRADLDIVTMNCAAHKYVGTHDFRNLCKMDVANGVINFQRTILSAEVKLVGQSLAEDGRQEPFQLCQFEVTGQAFLYHQVRCMMAVLFLIGQGMEKPEIIDELLNVEKNPQKPQYSMAVEFPLVLYDCKFENIKWIYDREVQEFNVTHLQQQWANQAVKTHLLYSMLQGLDSVAVPCGTGTAGQSA--------GGITYQNHVIQGHGEEQRRKE 405

[Close]

BLAST of mRNA_F-serratus_M_contig809.19484.1 vs. uniprot
Match: A0A7L3BM72_PELUR (PUS3 synthase (Fragment) n=8 Tax=Neognathae TaxID=8825 RepID=A0A7L3BM72_PELUR)

HSP 1 Score: 260 bits (665), Expect = 1.120e-74
Identity = 175/451 (38.80%), Postives = 221/451 (49.00%), Query Frame = 0

Query:  191 PGKKKRGAEREFDHSRWRRRTVAVQLMYEGEGYAGFCSQASDYHLTDRKDDVDTIERRLFHALTTTKLVDNITTGENYSRCGRTDRGVSALGNVITVSVRSNFPKDLHVDLPTSPLGSLRIPNGTTGNSHGSDGGDDANCRGNPGGKQVRGQGGDVAVRAAKAGSVDGSPGVARSARDYVGRESTGERSVDAEGSRESGXXXXXXXXXXXXXXXKTKKRMARTGARVTEIDYCGILNRVLPPDIRALAWAPVTEDFSARFSCSDRTYRYFFLARDLDIKAMDAAASRIVGEHDFRNLCKIDVAN-VSNFVRHVKHASVRPVPSPSADYGGTEYYRICVFEVCGQAFLWHMVRCLMSVLFMVGRGHESPEIMSFLMDLERCPAKPHYDMAPDGPLLLHACRFRSLRFRYTPENLYCLQDHLENLWQEAAIKAARLLNNLDYLSGTRVTVKAS 640
            PGK K+  +R FD   + RR VA+++ Y G GY GF SQ +  +         TIE +LF AL  T+LVDN  T  NY RCGRTD+GVSA G VI++ +RSN  +                                        GK++ G  GD                                    +EG  E                               E+ Y  ILNRVLPPDIRALAWAPV  DFSARFSC  R+YRYFF   DLD+  M AAA R VG HDFRNLCK+DVAN V NF R +  A V  V     + G  + +R+C FEV GQAFL+H VRC+M++LF++G+G ESPEI+  L+D+E+ P KP Y MA + PL+L+ C F +L++ Y  E       HL+ LW   A+K   L N L  L    V    S
Sbjct:   47 PGKAKKRQQRPFDFGAYGRRHVALKIAYLGWGYQGFASQENTSN---------TIEEKLFDALKKTRLVDNRQTS-NYHRCGRTDKGVSAFGQVISLDLRSNLSE----------------------------------------GKKLNGHKGD------------------------------------SEGKSEG----------------------------EEELRYTHILNRVLPPDIRALAWAPVEPDFSARFSCLKRSYRYFFPCADLDVALMHAAAQRYVGTHDFRNLCKMDVANGVVNFQRTILSAGVTWVER-GGETGLQDPFRLCQFEVTGQAFLYHQVRCMMAILFLIGQGMESPEIIDELLDVEKNPQKPQYSMAVEFPLVLYDCEFENLQWHYDREVQEFNVTHLQQLWANHAVKTQVLRNMLRGLDAAPVATGKS 382

[Close]

BLAST of mRNA_F-serratus_M_contig809.19484.1 vs. uniprot
Match: A0A7L0DH16_9CHAR (PUS3 synthase (Fragment) n=14 Tax=Charadriiformes TaxID=8906 RepID=A0A7L0DH16_9CHAR)

HSP 1 Score: 255 bits (651), Expect = 6.380e-73
Identity = 173/451 (38.36%), Postives = 223/451 (49.45%), Query Frame = 0

Query:  191 PGKKKRGAEREFDHSRWRRRTVAVQLMYEGEGYAGFCSQASDYHLTDRKDDVDTIERRLFHALTTTKLVDNITTGENYSRCGRTDRGVSALGNVITVSVRSNFPKDLHVDLPTSPLGSLRIPNGTTGNSHGSDGGDDANCRGNPGGKQVRGQGGDVAVRAAKAGSVDGSPGVARSARDYVGRESTGERSVDAEGSRESGXXXXXXXXXXXXXXXKTKKRMARTGARVTEIDYCGILNRVLPPDIRALAWAPVTEDFSARFSCSDRTYRYFFLARDLDIKAMDAAASRIVGEHDFRNLCKIDVAN-VSNFVRHVKHASVRPVPSPSADYGGTEYYRICVFEVCGQAFLWHMVRCLMSVLFMVGRGHESPEIMSFLMDLERCPAKPHYDMAPDGPLLLHACRFRSLRFRYTPENLYCLQDHLENLWQEAAIKAARLLNNLDYLSGTRVTVKAS 640
            PGK K+  +R F+   + RR VA+++ Y G GY GF SQ +  +         TIE +LF AL  T+LVD+  T  NY RCGRTD+GVSA G VI++ +RSN  +                                        GK + GQ                         D  G+ S GE                                         E+ Y  ILNRVLPPDIRALAWAPV  DFSARFSC  RTYRYFF   +LD+  MDAAA R VG HDFRNLCK+DVAN V NF R +  A V  V     + G  + +R+C FEV GQAFL+H VRC+M++LF++G+  E PEI++ L+D+E+ P KP Y MA + PL+L+ C F +L++ Y PE       HL+ LW   A+K   L + L  L    V  + S
Sbjct:   44 PGKAKKRQQRPFNFGAYGRRHVALKIAYLGWGYQGFASQENTSN---------TIEEKLFEALKKTRLVDDRQTS-NYHRCGRTDKGVSAFGQVISLHLRSNLAE----------------------------------------GKNLSGQ-------------------------DSKGK-SAGEE----------------------------------------ELRYTHILNRVLPPDIRALAWAPVEPDFSARFSCLKRTYRYFFPCANLDVALMDAAAQRYVGSHDFRNLCKMDVANGVVNFQRTILSAGVTWVER-GGETGPQDPFRLCQFEVTGQAFLYHQVRCMMAILFLIGQRMERPEIINELLDVEKNPQKPQYSMAVEFPLVLYDCAFENLQWLYDPEVQEFNVTHLQQLWANHAVKTQVLRDMLGGLDAAPVANRQS 377

[Close]

BLAST of mRNA_F-serratus_M_contig809.19484.1 vs. uniprot
Match: A0A091RQK4_NESNO (tRNA pseudouridine(38/39) synthase (Fragment) n=2 Tax=Nestor notabilis TaxID=176057 RepID=A0A091RQK4_NESNO)

HSP 1 Score: 253 bits (646), Expect = 6.920e-73
Identity = 166/446 (37.22%), Postives = 215/446 (48.21%), Query Frame = 0

Query:  191 PGKKKRGAEREFDHSRWRRRTVAVQLMYEGEGYAGFCSQASDYHLTDRKDDVDTIERRLFHALTTTKLVDNITTGENYSRCGRTDRGVSALGNVITVSVRSNFPKDLHVDLPTSPLGSLRIPNGTTGNSHGSDGGDDANCRGNPGGKQVRGQGGDVAVRAAKAGSVDGSPGVARSARDYVGRESTGERSVDAEGSRESGXXXXXXXXXXXXXXXKTKKRMARTGARVTEIDYCGILNRVLPPDIRALAWAPVTEDFSARFSCSDRTYRYFFLARDLDIKAMDAAASRIVGEHDFRNLCKIDVAN-VSNFVRHVKHASVRPVPSPSADYGGTEYYRICVFEVCGQAFLWHMVRCLMSVLFMVGRGHESPEIMSFLMDLERCPAKPHYDMAPDGPLLLHACRFRSLRFRYTPENLYCLQDHLENLWQEAAIKAARLLNNLDYLSGTRV 635
            PGK K+  +R FD   + RR VA+++ Y G GY GF SQ +           +TIE +LF AL  T+LVD+  T  NY RCGRTD+GVSA G VI++ +RSN  +                                        G+++ G GG                                                                  A  G    E+ Y  ILNRVLPPDIR LAWAPV  +FSARFSC  RTYRYFF   +LD+  M AAA R VG HDFRNLCK+DVAN V NF R +  A V  V       G  + + +C FEV GQAFL+H VRC+M++LF++G+G ESP+++  L+D+E+ P KP Y MA + PL+L+ C F +L++ Y  E       HL+ LW   AIK   L + L  L    V
Sbjct:   47 PGKGKKRQQRPFDFGAYGRRHVALKISYLGWGYQGFASQENT---------TNTIEEKLFEALKKTRLVDDRQTS-NYHRCGRTDKGVSAFGQVISLDLRSNLLE----------------------------------------GQKLNGHGG------------------------------------------------------------------ASGGKSEEELRYTHILNRVLPPDIRVLAWAPVEPEFSARFSCLKRTYRYFFPCANLDVGLMHAAAQRYVGTHDFRNLCKMDVANGVVNFQRTILSAGVTWVEGGGGGTGPQDPFHLCQFEVTGQAFLYHQVRCMMAILFLIGQGMESPDVIDELLDVEKNPQKPQYSMAVEFPLVLYDCEFENLQWLYDQEVQEFNVTHLQQLWASHAIKTQVLRSMLQGLDAAPV 376

[Close]

BLAST of mRNA_F-serratus_M_contig809.19484.1 vs. uniprot
Match: A0A6J2MWJ2_9CHIR (tRNA pseudouridine(38/39) synthase isoform X1 n=8 Tax=Phyllostomidae TaxID=9415 RepID=A0A6J2MWJ2_9CHIR)

HSP 1 Score: 256 bits (654), Expect = 7.420e-73
Identity = 169/439 (38.50%), Postives = 221/439 (50.34%), Query Frame = 0

Query:  198 AEREFDHSRWRRRTVAVQLMYEGEGYAGFCSQASDYHLTDRKDDVDTIERRLFHALTTTKLVDNITTGENYSRCGRTDRGVSALGNVITVSVRSNFPKDLHVDLPTSPLGSLRIPNGTTGNSHGSDGGDDANCRGNPGGKQVRGQGGDVAVRAAKAGSVDGSPGVARSARDYVGRESTGERSVDAEGSRESGXXXXXXXXXXXXXXXKTKKRMARTGARVTEIDYCGILNRVLPPDIRALAWAPVTEDFSARFSCSDRTYRYFFLARDLDIKAMDAAASRIVGEHDFRNLCKIDVAN-VSNFVRHVKHASVRPVPSPSADYGGTEYYRICVFEVCGQAFLWHMVRCLMSVLFMVGRGHESPEIMSFLMDLERCPAKPHYDMAPDGPLLLHACRFRSLRFRYTPENLYCLQDHLENLWQEAAIKAARLLNNLDYLSGTRV 635
            A+REFD S   RR VA+++ Y G GY GF SQ +  +         TIE +LF ALT T+LV++  T  NY RCGRTD+GVSA G VI++ +RS+FPKD                           G +D N                             + GV+ +A+                                                   EI Y  ILNRVLPPDIR LAWAPV   FSARFSC +RTYRYFF   DLDI  M+ AA + VG HDFRNLCK+DVAN V NF R +  A V+ V    A+ G  E +++C FEV GQAFL+H VRC+M+VLF++G+G E PEI+  L+++E+ P KP Y MA + PL+L+ C+F ++++ Y  E       HL+  W   A+K   L + L  L    V
Sbjct:   50 AKREFDFSAHGRRHVALKIAYLGWGYQGFASQENTNN---------TIEEKLFEALTKTRLVESRQTS-NYHRCGRTDKGVSAFGQVISLDLRSHFPKDR--------------------------GSEDFNV----------------------------TDGVSDAAK---------------------------------------------------EIRYTHILNRVLPPDIRVLAWAPVEPGFSARFSCLERTYRYFFPRADLDIVTMNCAAHKYVGTHDFRNLCKMDVANGVINFQRTILSAEVKLVGQSLAEDGRQEPFQLCQFEVTGQAFLYHQVRCMMAVLFLIGQGMEKPEIIDELLNVEKNPQKPQYSMAVEFPLVLYDCKFENIKWIYDREVQEFNVTHLQQQWANQAVKTHLLYSMLQGLDSVAV 373

[Close]

BLAST of mRNA_F-serratus_M_contig809.19484.1 vs. uniprot
Match: D7FHT8_ECTSI (Pseudouridylate synthase 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHT8_ECTSI)

HSP 1 Score: 256 bits (653), Expect = 8.340e-73
Identity = 206/402 (51.24%), Postives = 234/402 (58.21%), Query Frame = 0

Query:  159 PVSARGQSWRDKQQLKKQXXXXXXXXXXXXXKPGKKKR---GAEREFDHSRWRRRTVAVQLMYEGEGYAGFCSQASDYHLTDRKDDVDTIERRLFHALTTTKLVDNITTGENYSRCGRTDRGVSALGNVITVSVRSNFPKDL-HVDLPTSPLGSLRI------PNGTTG-NSHGSDGGDDANCRGNPGGKQVRGQGGDVAVRA------AKAGSVDGSPGVAR------------SARDYVGRESTGERSVD--------------------------------AEGSR---------ESGXXXXXXXXXXXXXXXKTKKRMARTGARVTEIDYCGILNRVLPPDIRALAWAPVTEDFSARFSCSDRTYRYFFLARDLDIKAMDAAASRIVGEHDFRNLCKI 490
            P   RG SWR+KQ+ K   XXXXXXXXXXXX  G+K +   G +R+FDHSRWR+RTVAVQLMYEG GYAGFCSQ+            +TIE+ LF ALTTTKLV+ ITTG+NYSRCGRTDRGVSALGNVITVS+RS FPK +   DLPTSPLGSL +      PNG      H  DG      +  P G     Q    A  A      AK  + +G P  +R            +    VGR      +                                  +EG R            XXXXXXXXXXXXXXX         G  VTEIDYCGILNRVLPP +R LAWAPVTE FSARFSCSDRTYRYFF+ARD+D+KAM+ AAS+IVG HDFRNLCKI
Sbjct:   51 PQGPRGLSWREKQRQKAAEXXXXXXXXXXXXXXGRKSKKGAGQQRDFDHSRWRKRTVAVQLMYEGGGYAGFCSQSEGNE--------ETIEKHLFRALTTTKLVETITTGDNYSRCGRTDRGVSALGNVITVSMRSKFPKHVPDADLPTSPLGSLWVAPTAPPPNGAESVGEH--DGAPKKENQTMPEGSAAAEQEQPAAGVAEEGSGLAKGKNSEGCPSDSRHQASGAPEPWTEAGGGEVGRGEVASGNPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRGSEGERGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGEVTEIDYCGILNRVLPPGVRTLAWAPVTEGFSARFSCSDRTYRYFFMARDMDVKAMNEAASKIVGSHDFRNLCKI 442

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig809.19484.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig809.19484.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JEX6_9PHAE	2.430e-224	56.79	PseudoU_synth_1 domain-containing protein n=1 Tax=...	[more]
D7FHT9_ECTSI	1.360e-94	57.25	tRNA pseudouridine synthase n=1 Tax=Ectocarpus sil...	[more]
A0A7S3H897_9STRA	1.570e-77	33.28	Hypothetical protein n=1 Tax=Spumella elongata Tax...	[more]
A0A7K4JSW7_GEOCA	4.070e-77	39.46	PUS3 synthase (Fragment) n=2 Tax=Cuculiformes TaxI...	[more]
A0A7E6CV69_9CHIR	6.340e-77	37.16	tRNA pseudouridine(38/39) synthase isoform X2 n=2 ...	[more]
A0A7L3BM72_PELUR	1.120e-74	38.80	PUS3 synthase (Fragment) n=8 Tax=Neognathae TaxID=...	[more]
A0A7L0DH16_9CHAR	6.380e-73	38.36	PUS3 synthase (Fragment) n=14 Tax=Charadriiformes ...	[more]
A0A091RQK4_NESNO	6.920e-73	37.22	tRNA pseudouridine(38/39) synthase (Fragment) n=2 ...	[more]
A0A6J2MWJ2_9CHIR	7.420e-73	38.50	tRNA pseudouridine(38/39) synthase isoform X1 n=8 ...	[more]
D7FHT8_ECTSI	8.340e-73	51.24	Pseudouridylate synthase 3 n=1 Tax=Ectocarpus sili...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 669..693
None	No IPR available	GENE3D	3.30.70.580		coord: 200..306 e-value: 1.1E-17 score: 65.9
None	No IPR available	PANTHER	PTHR11142:SF5	TRNA PSEUDOURIDINE(38/39) SYNTHASE	coord: 170..684
IPR020095	Pseudouridine synthase I, TruA, C-terminal	GENE3D	3.30.70.660		coord: 447..587 e-value: 3.6E-19 score: 70.8
IPR020097	Pseudouridine synthase I, TruA, alpha/beta domain	PFAM	PF01416	PseudoU_synth_1	coord: 474..590 e-value: 3.2E-27 score: 95.1
IPR001406	Pseudouridine synthase I, TruA	PANTHER	PTHR11142	PSEUDOURIDYLATE SYNTHASE	coord: 170..684
IPR020103	Pseudouridine synthase, catalytic domain superfamily	SUPERFAMILY	55120	Pseudouridine synthase	coord: 209..599

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig809	contig	F-serratus_M_contig809:40765..80080 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig809.19484.1	mRNA_F-serratus_M_contig809.19484.1	Fucus serratus male	mRNA	F-serratus_M_contig809 40743..80641 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig809.19484.1 ID=prot_F-serratus_M_contig809.19484.1|Name=mRNA_F-serratus_M_contig809.19484.1|organism=Fucus serratus male|type=polypeptide|length=838bp
MENRDVNLRDIIGGATQEELKALLLALEGRVVDVDAVQDTLEAMRNAAGA
PDPATPPAAPAKRPRHEPQAETSSSHPAPEPPPPQVAPTARAATEVEVEG
REGGDEGRSTTSAPPHASPPSICSGGDTRAAPAPLPRGVTPADVAQMGCQ
SEAGKGAAPVSARGQSWRDKQQLKKQQKQQQDREGGAGGKPGKKKRGAER
EFDHSRWRRRTVAVQLMYEGEGYAGFCSQASDYHLTDRKDDVDTIERRLF
HALTTTKLVDNITTGENYSRCGRTDRGVSALGNVITVSVRSNFPKDLHVD
LPTSPLGSLRIPNGTTGNSHGSDGGDDANCRGNPGGKQVRGQGGDVAVRA
AKAGSVDGSPGVARSARDYVGRESTGERSVDAEGSRESGGGNEGGGNSAE
KKKEKTKKRMARTGARVTEIDYCGILNRVLPPDIRALAWAPVTEDFSARF
SCSDRTYRYFFLARDLDIKAMDAAASRIVGEHDFRNLCKIDVANVSNFVR
HVKHASVRPVPSPSADYGGTEYYRICVFEVCGQAFLWHMVRCLMSVLFMV
GRGHESPEIMSFLMDLERCPAKPHYDMAPDGPLLLHACRFRSLRFRYTPE
NLYCLQDHLENLWQEAAIKAARLLNNLDYLSGTRVTVKASCADLDAFVTI
KRTMKGANIEHHSVRDHGLEGQRRERERQQQQQQQQEQQAELNGFPAQSD
VPEGRRGTDSATKAVDAGGRDERQGCNGEGGDEELTWKEALARMRQMGLG
PGQVLGRKGHMPMARRQQSLNYNELVQGLGGKKRERLDRHLKMKTEGHMS
GETDAFYEAMQLQGTLGKASPDAPSGSAAAAHSLTPS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR020095	PsdUridine_synth_TruA_C
IPR020097	PsdUridine_synth_TruA_a/b_dom
IPR001406	PsdUridine_synth_TruA
IPR020103	PsdUridine_synth_cat_dom_sf