mRNA_F-serratus_M_contig8067.19467.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig8067.19467.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE) HSP 1 Score: 302 bits (773), Expect = 3.350e-92 Identity = 161/293 (54.95%), Postives = 204/293 (69.62%), Query Frame = 3
Query: 255 GDDLAKSIKTMIKNHGLTGHVVVCNTDCEPSMVKAGRIL-TDDAVLMHVGCTCHRIECVTALVFDGPGVKKSMALARAVVTRYTKSSQAAGRLQELCGIVGIIPLKVIQDVETRWWSTQSMVERLVYLRRAVELHESLDNVAPLLGPVDWNVLELLEPVLAPFMYVQKKLE-FNNVTGSLVVPLICDLRAGLDVERKALQQPNH-GASAVVLAARVLLLPCVEALAKDFNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDPRCKMLYGVLPNEHEGVWQAVAMAAADIA 1124
G+DLA+ I +MI+ HGLTG V C TDCEPSMVKAGR+L + L H+GC+ HR+E T+ VF+G + ++A ARAVV RY +SSQ +GRL GI+ + PL V+QDVETRWWS+ +M+ERL+YL +A++LHES DN+AP+L DW VL L+EP+L PFM QK LE VTGS+ VP I +LR GL+ L+ + G SA A +LP EAL +DF NR+GDGS IL +REG RRQPQGF+ QV ATA+DPR K LYG+ EH VW+AVA A DIA
Sbjct: 122 GEDLAREITSMIERHGLTGRVTACVTDCEPSMVKAGRLLEVGGSNLEHIGCSNHRMESTTSSVFNGKSLG-ALAKARAVVGRYKRSSQMSGRLAVFIGILKLSPLSVLQDVETRWWSSWAMIERLLYLMKAIKLHESTDNIAPVLSETDWEVLRLIEPILRPFMQAQKDLEGAKYVTGSMTVPKIGELRNGLEAAIADLRATDRFGISASTREAMEAVLPDAEALWEDFLNRWGDGSSILEYREGKRRQPQGFKLQQVCATAVDPRAKHLYGIRQAEHASVWRAVATKAVDIA 413
BLAST of mRNA_F-serratus_M_contig8067.19467.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI) HSP 1 Score: 301 bits (770), Expect = 1.550e-91 Identity = 158/295 (53.56%), Postives = 203/295 (68.81%), Query Frame = 3
Query: 255 GDDLAKSIKTMIKNHGLTGHVVVCNTDCEPSMVKAGRIL-TDDAVLMHVGCTCHRIECVTALVFDGPGVKKSMALARAVVTRYTKSSQAAGRLQELCGIVGIIPLKVIQDVETRWWSTQSMVERLVYLRRAVELHESLDNVAPLLGPVDWNVLELLEPVLAPFMYVQKKLE-FNNVTGSLVVPLICDLRAGLDV---ERKALQQPNHGASAVVLAARVLLLPCVEALAKDFNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDPRCKMLYGVLPNEHEGVWQAVAMAAADIA 1124
G+DLA + M++ H LTG V+ C TDCEPSM+KAGR+L D + + H+GC+ HR+E T+ VF+G + ++ LAR +V RY KSSQ A RL +LCGI+ + PL V+QDVETRWWST +MV RL+YL +A++LHES+D V PLL DW VL L+EP+L PFM QK LE VTGS+ + + +LR GL+ + KA+ Q G A + P EAL DF NR+GDGS+IL +REG RRQPQGF++ QV ATALDPR K LYG+ EH GVW+AVA AA DIA
Sbjct: 86 GEDLAALVAGMVERHDLTGRVIACVTDCEPSMIKAGRLLEVDGSTISHIGCSNHRMESTTSSVFNGRSLG-ALGLARTLVGRYKKSSQMAARLVQLCGILQMEPLSVMQDVETRWWSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTIGKMAELREGLEAAITDLKAVAQ--QGLKETTQKAMEAVRPDAEALMADFTNRWGDGSNILEYREGKRRQPQGFKRKQVYATALDPRAKHLYGIQQREHAGVWRAVASAAVDIA 377
BLAST of mRNA_F-serratus_M_contig8067.19467.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE) HSP 1 Score: 278 bits (711), Expect = 5.790e-85 Identity = 144/291 (49.48%), Postives = 188/291 (64.60%), Query Frame = 3
Query: 255 GDDLAKSIKTMIKNHGLTGHVVVCNTDCEPSMVKAGRILTDDAVLMHVGCTCHRIECVTALVFDGPGVKKSMALARAVVTRYTKSSQAAGRLQELCGIVGIIPLKVIQDVETRWWSTQSMVERLVYLRRAVELHESLDNVAPLLGPVDWNVLELLEPVLAPFMYVQKKLEFNN-VTGSLVVPLICDLRAGLDVERKALQQPNHGASAVVLAARVLLLPCVEALAKDFNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDPRCKMLYGVLPNEHEGVWQAVAMAAADIA 1124
G+DL +++K MI +GLTG V TDCEP MVKAGR+L ++ + H+GC CHR E +T+ F GPGV K++AL R VVTRYT SSQA+ RL+++C IV + KV+QDVETRWWST +D++ PLL DW VL+L+EP+L PFM QK LE + VT SLV I DLR LD + LQ + A ++V A+ +L C AL D + R+ DG+D+L + EGPRRQP+GF+K QV+ATALDPR K LYG+ EH VW+AVA A +A
Sbjct: 39 GEDLVEAVKAMIARNGLTGRTVATTTDCEPFMVKAGRLLEENEGVSHLGCFCHRFESITSQAFGGPGVSKALALPRGVVTRYTMSSQASNRLEQMCDIVQVERKKVVQDVETRWWSTP----------------REIDSIPPLLNEKDWEVLQLVEPLLHPFMTAQKHLEASKGVTVSLVTAYIADLRDELDEAIERLQAYSCPAESIVAEAKKDILRCAPALQTDLSRRWRDGTDVLVYTEGPRRQPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVA 313
BLAST of mRNA_F-serratus_M_contig8067.19467.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE) HSP 1 Score: 288 bits (738), Expect = 1.790e-83 Identity = 147/291 (50.52%), Postives = 196/291 (67.35%), Query Frame = 3
Query: 255 GDDLAKSIKTMIKNHGLTGHVVVCNTDCEPSMVKAGRILTDDAVLMHVGCTCHRIECVTALVFDGPGVKKSMALARAVVTRYTKSSQAAGRLQELCGIVGIIPLKVIQDVETRWWSTQSMVERLVYLRRAVELHESLDNVAPLLGPVDWNVLELLEPVLAPFMYVQKKLEFNN-VTGSLVVPLICDLRAGLDVERKALQQPNHGASAVVLAARVLLLPCVEALAKDFNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDPRCKMLYGVLPNEHEGVWQAVAMAAADIA 1124
G+DL +++K MI +GLTG V TDCE SMVKAGR+L ++ + H+GC CHR+E +T+ F GPGV K++ALAR VVTRYT SSQA+ RL+++C IV + V+QDVETRWWST + RL+ LRR + HE +D+ PLL DW VL+L+E +L PFM QK LE + VT LV P I DL+ GLD + LQ + A ++V A+ ++ C +AL D + R+GD +D+L + EGPRRQP+GF+K QV+ATAL PR K LYG+ EH VW A A A +A
Sbjct: 51 GEDLVEAVKAMIARNGLTGRTVAITTDCELSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARGVVTRYTISSQASDRLEQVCDIVQVERKNVVQDVETRWWSTYVSICRLISLRRPITEHEIIDSTPPLLKEKDWEVLQLVESLLKPFMTAQKHLEASKEVTVRLVSPYIADLQDGLDEAVERLQAHSCPAESIVAEAKKDVILCAQALQTDLSRRWGDRTDVLVYTEGPRRQPRGFKKEQVLATALGPRSKSLYGIEETEHSDVWDAGANEAVKVA 341
BLAST of mRNA_F-serratus_M_contig8067.19467.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE) HSP 1 Score: 244 bits (624), Expect = 6.710e-71 Identity = 134/293 (45.73%), Postives = 185/293 (63.14%), Query Frame = 3
Query: 255 GDDLAKSIKTMIKNHGLTGHVVVCNTDCEPSMVKAGRILTDDAVLMHVGCTCHRIECVTALVFDGPGVKKSMALARAVVTRYTKSSQAAGRLQELCGIVGIIPLKVIQDVETRWWSTQSMVERLVYLRRAVELHESLDNVAPLLGPVDWNVLELLEPVLAPFMYVQKKLEFN-NVTGSLVVPLICDLRAGLDVERKALQQPNHGASAVVLAARVLLLPCVEALAKD--FNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDPRCKMLYGVLPNEHEGVWQAVAMAAADIA 1124
G+DL +++K MI +GLT V TDCEPSMVKAGR+L ++ + H+GC CHR+E +T+ F GPGV K++ALAR VVTRY SSQA+ RL+++ IV + KV+QDVETRWWST + + RL+ LRR + HE +D++ PLL DW VL+++EP+ PF+ QK E + +VT SLV+P I DLR LD + LQ A ++V A+ KD F + + ++ +P+GF+K QV+ATALDPR K LYG+ EH VW+AVA A +A
Sbjct: 95 GEDLVEAVKAMIARNGLTSRTVATTTDCEPSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARRVVTRYNMSSQASDRLEQMRDIVQVERKKVVQDVETRWWSTYASICRLLSLRRPITEHERIDSIPPLLKEKDWEVLQVVEPLSKPFILSQKHREASKDVTVSLVIPYIADLRDELDEAVERLQAHACPAESIVAEAK-----------KDVFFAPKHVRPTSVIV-------EPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVA 369
BLAST of mRNA_F-serratus_M_contig8067.19467.1 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE) HSP 1 Score: 180 bits (457), Expect = 4.660e-45 Identity = 117/296 (39.53%), Postives = 151/296 (51.01%), Query Frame = 3
Query: 255 GDDLAKSIKTMIKNHGLTGHVVVCNTDCEPSMVKAGRILTDDA-VLMHVGCTCHRIECVTALVFDGPGVKKSMALARAVVTRYTKSSQAAGRLQELCGI-VGIIPLKVIQDVETRWWSTQSMVERLVYLRRAVELHESLDNVAPLLGPVDWNVLELLEPVLAPFMYVQKKLEFNNVTGSLVVPLICDLRAGLDVERKALQQPNHGASAVVLAARVLLLPCVEALAKDFNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDPRCKMLYGVLPNEHEGVWQAVAMAAADIAKSTQ 1136
GD LA IK + HGLTG V TDCEPSMVK GR+L DA V +GC +R+E +++VF+GP VKK M LAR +VTRY SSQAA RL++ +G+ +VIQDV VTGSLVVP I DLR L+ L + + A V A ++PC++AL D+ +R+GDG +IL ++EGPRRQP GF+ V V+ATALDPR K+ YGV +E VW+ V A IA T+
Sbjct: 86 GDALAAGIKATVAKHGLTGKVTAVTTDCEPSMVKMGRLLAGDATVSTQIGCCNYRLESTSSIVFNGPRVKKVMVLARGLVTRYPTSSQAADRLKQFVKTYLGVDNKRVIQDV---------------------------------------------------------------VTGSLVVPFIYDLRNSLEDAIDDLVELPPDSDANVNTAWAAVMPCIKALRDDYIDRWGDGHNILIYKEGPRRQPGGFKPVHVLATALDPRTKIPYGVDEDEKADVWKLVQEEAVKIAVETR 318
BLAST of mRNA_F-serratus_M_contig8067.19467.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE) HSP 1 Score: 119 bits (299), Expect = 1.910e-26 Identity = 56/100 (56.00%), Postives = 75/100 (75.00%), Query Frame = 1
Query: 1354 EVTRYRVASGLAMEEAQESGKILYPDPLDWWRINAVKFPLLAALARRLLAIPASQAQSERVFSSAGQIVTQTRNRLSSEKVELLVALKNIWSVVEEWQQS 1653
E+T ++V++G+ M E + G +Y DPLDWWR+ FP LA LARR+LAIPA+QA+SER+FS AG IVT+ RN L+ VELLV L++ W +VEEW+QS
Sbjct: 197 ELTAFKVSTGIKMYEEDKEGAKVYLDPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLLRHSWKIVEEWEQS 296
BLAST of mRNA_F-serratus_M_contig8067.19467.1 vs. uniprot
Match: A0A6H5JVE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVE5_9PHAE) HSP 1 Score: 94.4 bits (233), Expect = 1.350e-17 Identity = 43/75 (57.33%), Postives = 57/75 (76.00%), Query Frame = 3
Query: 876 VLAARVLLLPCVEALAKDFNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDPRCKMLYGVLPNEHEGVWQAV 1100
V AR ++PC++AL DF NR+GDG +IL ++EGPRRQP GF+ VQV+ATALDPR K+L+GV +E VW+ V
Sbjct: 155 VNTARAAVMPCIKALRDDFINRWGDGRNILNYKEGPRRQPAGFKPVQVLATALDPRTKILHGVDEDEKADVWKLV 229
BLAST of mRNA_F-serratus_M_contig8067.19467.1 vs. uniprot
Match: A0A498MJP0_LABRO (Zinc finger BED domain-containing 6-like isoform X2 n=2 Tax=Labeo rohita TaxID=84645 RepID=A0A498MJP0_LABRO) HSP 1 Score: 83.6 bits (205), Expect = 2.650e-14 Identity = 79/269 (29.37%), Postives = 128/269 (47.58%), Query Frame = 3
Query: 258 DDLAKSIKTMIKNHGLTGHVVVCNTDCEPSMVKAGRILTDDAVLMHVGCTCHRIECVTALVFDGPGVKKSM-ALARAVVTRYTKSSQAAGRLQELCGIVGIIPLKVIQDVETRWWSTQSMVERLVYLRRAVELH-ESLDNVAPLLGPVDWNVLELLEPVLAPFMYVQKKLEFNN-VTGSLVVPLICDLRAGLDVERKALQQPNHGASAVVLAARVLLLPCVEALAKDFNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDPRCKML 1055
D++ +++ +I + GLTG V TD +MV A + L L H+ C H I + + V + + AR VV+ + S++A +L +G PLK++Q+V+TRW ST M++RL+ LR V SL N L D++++ VLAPF Y ++L V+ S ++P+I ++ + E+ AL + N AS++ +A L + N R + I +V +AT LDPR K L
Sbjct: 18 DNIKEALLELISDWGLTGSVAAMVTDNAANMVSAIQKLG----LRHLPCFAHTINLIVKRAVEEHEVMADIRSRARRVVSYFRSSTKATEKLILAQERMGRQPLKLLQEVDTRWNSTHDMLQRLIDLREPVGAALASLSNDIMPLSSADFDIISESLEVLAPFKYATEELSGEKRVSASKIIPIIRMIQHKV-AEKTALAR-NASASSLGIA-----------LQQYINKRCSNVESI---------------RVLALATLLDPRFKTL 254
BLAST of mRNA_F-serratus_M_contig8067.19467.1 vs. uniprot
Match: A0A6H5JPB0_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPB0_9PHAE) HSP 1 Score: 82.4 bits (202), Expect = 3.610e-14 Identity = 41/63 (65.08%), Postives = 51/63 (80.95%), Query Frame = 1
Query: 1465 FPLLAALARRLLAIPASQAQSERVFSSAGQIVTQTRNRLSSEKVELLVALKNIWSVVEEWQQS 1653
FP LA LARR+LAIPA+QA+SER+FS AG IVT+ RN L+ VELLV L++ W +VEEW+QS
Sbjct: 154 FPHLANLARRVLAIPATQAKSERLFSCAGNIVTKNRNNLAPTTVELLVLLRHSWKIVEEWEQS 216 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig8067.19467.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig8067.19467.1 >prot_F-serratus_M_contig8067.19467.1 ID=prot_F-serratus_M_contig8067.19467.1|Name=mRNA_F-serratus_M_contig8067.19467.1|organism=Fucus serratus male|type=polypeptide|length=111bp MKQGREVTRYRVASGLAMEEAQESGKILYPDPLDWWRINAVKFPLLAALAback to top mRNA from alignment at F-serratus_M_contig8067:6567..8237+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig8067.19467.1 ID=mRNA_F-serratus_M_contig8067.19467.1|Name=mRNA_F-serratus_M_contig8067.19467.1|organism=Fucus serratus male|type=mRNA|length=1671bp|location=Sequence derived from alignment at F-serratus_M_contig8067:6567..8237+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig8067:6567..8237+ >mRNA_F-serratus_M_contig8067.19467.1 ID=mRNA_F-serratus_M_contig8067.19467.1|Name=mRNA_F-serratus_M_contig8067.19467.1|organism=Fucus serratus male|type=CDS|length=666bp|location=Sequence derived from alignment at F-serratus_M_contig8067:6567..8237+ (Fucus serratus male)back to top |