prot_F-serratus_M_contig126.1945.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig126.1945.1
Unique Nameprot_F-serratus_M_contig126.1945.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length647
Homology
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BLAST of mRNA_F-serratus_M_contig126.1945.1 vs. uniprot
Match: D8LJV6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJV6_ECTSI)

HSP 1 Score: 254 bits (650), Expect = 4.770e-75
Identity = 153/309 (49.51%), Postives = 195/309 (63.11%), Query Frame = 0 
Query:  361 KYPSSDKESFARTLKDDELEELWQGLGEGVSQRGGGSEV------AYEPPPAPTSPGTTASGAFPMLTANVLERHDQLAGDETKRSA------------NVMPMPKGVGDKGLHGMENGGAPASSSKKNRGSS-----DRKQYSLLGLITLYGVLVLWVVHLVFNVLLLRPVILNDHQYLWVLCLAPGLLGTLFSINSCYRNGHPKCKPTEDREXXXXXXXXGNTRSGPHACALPSYVVLLLLVVLALGMHASAMLFCEQAVEPIFFNETTXXXXXXXXXXXLPVVLDAVLLMVASLKASSLCWAWVLS 646
            ++PS D+ESFARTL ++EL+E+W+GLGEGVSQRG GSEV      A   PP+P   GT  SGAFP LTANVLERHDQLA D                  NV+P+PK + ++    MENG +   SS    G+       +++ +LLG I  YGVLVLWV HLVFNVLLL  V+ ++   +W LC  PG+LG L S+NSC R  H +CKP    +        G  RS PHACALP++ +LLL VV+ LG+HASA+LFCE+ +  + F E T           LP++LDA++L VASLKASSLCWAWVL+
Sbjct:   82 RFPSHDRESFARTLNNEELDEVWKGLGEGVSQRGCGSEVGVGFDLADTTPPSPN--GTGVSGAFPKLTANVLERHDQLADDXXXXXXXXXXXXXXXXXXNVVPIPKKLMERSAEDMENGTSSKKSSGNGNGNQPASGVQQQEKTLLGAIVSYGVLVLWVGHLVFNVLLLWRVVADEQ--VWALCFLPGVLGILLSVNSC-RKSHRRCKPLNADDAQTQRRQRGRERSAPHACALPAHTLLLLAVVVCLGLHASALLFCEKDML-LVFEEETLDPLCDDSSLALPLILDAIVLSVASLKASSLCWAWVLN 384
[Close]
BLAST of mRNA_F-serratus_M_contig126.1945.1 vs. uniprot
Match: A0A6H5JGU1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU1_9PHAE)

HSP 1 Score: 252 bits (643), Expect = 1.320e-70
Identity = 152/307 (49.51%), Postives = 191/307 (62.21%), Query Frame = 0 
Query:  361 KYPSSDKESFARTLKDDELEELWQGLGEGVSQRGGGSEV------AYEPPPAPTSPGTTASGAFPMLTANVLERHDQLAGDETKR----------SANVMPMPKGVGDKGLHGMENGGAPASSSKKNRGSS-----DRKQYSLLGLITLYGVLVLWVVHLVFNVLLLRPVILNDHQYLWVLCLAPGLLGTLFSINSCYRNGHPKCKPTEDREXXXXXXXXGNTRSGPHACALPSYVVLLLLVVLALGMHASAMLFCEQAVEPIFFNETTXXXXXXXXXXXLPVVLDAVLLMVASLKASSLCWAWVLS 646
            ++PS D+ESFARTL D+EL+E+W GLGEGVSQRG GSEV      A   PP+P   GT  SGAFP LTANVLERHDQLA D              +ANV+P+PK + ++    MENG +   SS    G+       +++ +LLG I  YGVLVLWV HLVFNVLLL  V+ ++   +W LC  PG+LG L S+N C R  H  CKP    +        G  RS PHAC+LP + +LLL VV+ LG+HASA LFCE+ +  + F E T           LP++LD ++L VASLKASSLCWAWVL+
Sbjct:  411 RFPSHDRESFARTLNDEELDEVWNGLGEGVSQRGCGSEVGVGVDLADTTPPSPN--GTGVSGAFPKLTANVLERHDQLADDXXXXXXXXXXXXXXAANVVPIPKQLMERSAEDMENGTSSKKSSGNGSGNQPASGVQQQEKTLLGAIASYGVLVLWVAHLVFNVLLLWRVVADEQ--VWALCFVPGVLGILLSVNRC-RKSHRHCKPLNTDDAQTQQRQQGLGRSAPHACSLPVHTLLLLAVVVCLGLHASAFLFCEKDML-LVFEEETLDPLCDDSSLTLPLILDGIVLSVASLKASSLCWAWVLN 711
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig126.1945.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJV6_ECTSI4.770e-7549.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JGU1_9PHAE1.320e-7049.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 505..515
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 595..617
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 516..537
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..479
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 480..504
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 618..644
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 571..594
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 538..570
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 645..646
NoneNo IPR availableTMHMMTMhelixcoord: 573..595
NoneNo IPR availableTMHMMTMhelixcoord: 482..504
NoneNo IPR availableTMHMMTMhelixcoord: 516..533

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig126contigF-serratus_M_contig126:241470..246008 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig126.1945.1mRNA_F-serratus_M_contig126.1945.1Fucus serratus malemRNAF-serratus_M_contig126 240982..247359 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig126.1945.1 ID=prot_F-serratus_M_contig126.1945.1|Name=mRNA_F-serratus_M_contig126.1945.1|organism=Fucus serratus male|type=polypeptide|length=647bp
MDGTPSAPGTPTSGSNGGSMKEDHCHTPSSGRTAPPTLEELEAMEGAKEW
KKAELESSTPGASNVSENSKHSSKRGLAQTFSRQVSRISGTGRPATALQH
QPKQATAAMGMSTATPVILASIPARLDRTEEEHVGPKDGPRPRMNIERCS
TTNFEETDDRRINSPTGAWKAGPVSAPSRLAHSGNEKLTARKASSFLRGH
SSKLLVAAKANGKGPSHHQSPDLSSQRTQLESYSIRGVPTTTKRGETIKR
SDHPHHPIVLTDDEGINGDREEGPALIDVSLKSPSKRIDGAGSDSDMDVD
DVQVVEKTPTGGASSCGSPACWGGGLPPMRNAIAQGPPTARAAAARAPPA
TVRYPETRQPKYPSSDKESFARTLKDDELEELWQGLGEGVSQRGGGSEVA
YEPPPAPTSPGTTASGAFPMLTANVLERHDQLAGDETKRSANVMPMPKGV
GDKGLHGMENGGAPASSSKKNRGSSDRKQYSLLGLITLYGVLVLWVVHLV
FNVLLLRPVILNDHQYLWVLCLAPGLLGTLFSINSCYRNGHPKCKPTEDR
EEEEEDEEDGNTRSGPHACALPSYVVLLLLVVLALGMHASAMLFCEQAVE
PIFFNETTLEPLCEEDSLLLPVVLDAVLLMVASLKASSLCWAWVLS*
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