prot_F-serratus_M_contig8052.19460.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig8052.19460.1
Unique Nameprot_F-serratus_M_contig8052.19460.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length165
Homology
BLAST of mRNA_F-serratus_M_contig8052.19460.1 vs. uniprot
Match: A4ZW39_SACJA (CbbX n=1 Tax=Saccharina japonica TaxID=88149 RepID=A4ZW39_SACJA)

HSP 1 Score: 55.5 bits (132), Expect = 5.920e-6
Identity = 32/53 (60.38%), Postives = 34/53 (64.15%), Query Frame = 0
Query:    6 RVRHGRTVAAHVFHWC----SGNGQDHTVALRMGQILQRMGYCRQGHVAVATR 54
            R + G   A    H C     G G+  TVALRMGQILQRMGYCRQGHV VATR
Sbjct:  166 RGKLGFDTAVPSLHMCFTGAPGTGKT-TVALRMGQILQRMGYCRQGHVVVATR 217          
BLAST of mRNA_F-serratus_M_contig8052.19460.1 vs. uniprot
Match: A0A7S2SBU4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SBU4_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 7.960e-6
Identity = 34/74 (45.95%), Postives = 42/74 (56.76%), Query Frame = 0
Query:    6 RVRHGRTVAAHVFHWC----SGNGQDHTVALRMGQILQRMGYCRQGHVAVATR--MISSDNTSATPPQNQVIRR 73
            R + G   A    H C     G G+  TVA+RMGQILQRMGYCRQGHV VATR  ++        P   +VI++
Sbjct:  160 RRKLGFDTAVPSLHMCFTGAPGTGKT-TVAIRMGQILQRMGYCRQGHVIVATRDDLVGQYIGHTAPKTKEVIKK 232          
BLAST of mRNA_F-serratus_M_contig8052.19460.1 vs. uniprot
Match: D8LPQ0_ECTSI (CbbX protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPQ0_ECTSI)

HSP 1 Score: 54.7 bits (130), Expect = 1.090e-5
Identity = 28/37 (75.68%), Postives = 29/37 (78.38%), Query Frame = 0
Query:   18 FHWCSGNGQDHTVALRMGQILQRMGYCRQGHVAVATR 54
            F    G G+  TVALRMGQILQRMGYCRQGHV VATR
Sbjct:  182 FTGAPGTGKT-TVALRMGQILQRMGYCRQGHVVVATR 217          
BLAST of mRNA_F-serratus_M_contig8052.19460.1 vs. uniprot
Match: M2W4M3_GALSU (AAA-type ATPase family protein / ankyrin repeat family protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W4M3_GALSU)

HSP 1 Score: 53.1 bits (126), Expect = 3.690e-5
Identity = 31/74 (41.89%), Postives = 42/74 (56.76%), Query Frame = 0
Query:    6 RVRHGRTVAAHVFHWC----SGNGQDHTVALRMGQILQRMGYCRQGHVAVATR--MISSDNTSATPPQNQVIRR 73
            R + G   A    H C     G G+  TVA+RMGQIL++MGYCRQGH+ VATR  ++        P   +VI++
Sbjct:  165 RAKIGLDTAVPSLHMCFTGSPGTGKT-TVAMRMGQILKKMGYCRQGHLVVATRDDLVGQYVGHTAPKTKEVIKK 237          
BLAST of mRNA_F-serratus_M_contig8052.19460.1 vs. uniprot
Match: A0A7S3WP69_EMIHU (Hypothetical protein n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WP69_EMIHU)

HSP 1 Score: 52.4 bits (124), Expect = 4.270e-5
Identity = 27/37 (72.97%), Postives = 28/37 (75.68%), Query Frame = 0
Query:   18 FHWCSGNGQDHTVALRMGQILQRMGYCRQGHVAVATR 54
            F    G G+  TVALRMGQILQRMGYCR GHV VATR
Sbjct:    1 FTGAPGTGKT-TVALRMGQILQRMGYCRTGHVVVATR 36          
BLAST of mRNA_F-serratus_M_contig8052.19460.1 vs. uniprot
Match: R1D2D9_EMIHU (ATPase_AAA_core domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1D2D9_EMIHU)

HSP 1 Score: 52.4 bits (124), Expect = 4.300e-5
Identity = 27/37 (72.97%), Postives = 28/37 (75.68%), Query Frame = 0
Query:   18 FHWCSGNGQDHTVALRMGQILQRMGYCRQGHVAVATR 54
            F    G G+  TVALRMGQILQRMGYCR GHV VATR
Sbjct:  176 FTGAPGTGKT-TVALRMGQILQRMGYCRTGHVVVATR 211          
BLAST of mRNA_F-serratus_M_contig8052.19460.1 vs. uniprot
Match: R1FUU7_EMIHU (AAA domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FUU7_EMIHU)

HSP 1 Score: 52.4 bits (124), Expect = 5.860e-5
Identity = 27/37 (72.97%), Postives = 28/37 (75.68%), Query Frame = 0
Query:   18 FHWCSGNGQDHTVALRMGQILQRMGYCRQGHVAVATR 54
            F    G G+  TVALRMGQILQRMGYCR GHV VATR
Sbjct:   72 FTGAPGTGKT-TVALRMGQILQRMGYCRTGHVVVATR 107          
BLAST of mRNA_F-serratus_M_contig8052.19460.1 vs. uniprot
Match: A0A7S2IX56_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2IX56_9EUKA)

HSP 1 Score: 52.4 bits (124), Expect = 6.730e-5
Identity = 27/37 (72.97%), Postives = 28/37 (75.68%), Query Frame = 0
Query:   18 FHWCSGNGQDHTVALRMGQILQRMGYCRQGHVAVATR 54
            F    G G+  TVALRMGQILQRMGYCR GHV VATR
Sbjct:  171 FTGAPGTGKT-TVALRMGQILQRMGYCRTGHVVVATR 206          
BLAST of mRNA_F-serratus_M_contig8052.19460.1 vs. uniprot
Match: A0A7S0LAX6_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LAX6_9EUKA)

HSP 1 Score: 52.4 bits (124), Expect = 6.740e-5
Identity = 27/37 (72.97%), Postives = 28/37 (75.68%), Query Frame = 0
Query:   18 FHWCSGNGQDHTVALRMGQILQRMGYCRQGHVAVATR 54
            F    G G+  TVALRMGQILQRMGYCR GHV VATR
Sbjct:  177 FTGAPGTGKT-TVALRMGQILQRMGYCRTGHVVVATR 212          
BLAST of mRNA_F-serratus_M_contig8052.19460.1 vs. uniprot
Match: A0A7S2IY60_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2IY60_9EUKA)

HSP 1 Score: 52.4 bits (124), Expect = 6.780e-5
Identity = 27/37 (72.97%), Postives = 28/37 (75.68%), Query Frame = 0
Query:   18 FHWCSGNGQDHTVALRMGQILQRMGYCRQGHVAVATR 54
            F    G G+  TVALRMGQILQRMGYCR GHV VATR
Sbjct:  181 FTGAPGTGKT-TVALRMGQILQRMGYCRTGHVVVATR 216          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig8052.19460.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A4ZW39_SACJA5.920e-660.38CbbX n=1 Tax=Saccharina japonica TaxID=88149 RepID... [more]
A0A7S2SBU4_9STRA7.960e-645.95Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
D8LPQ0_ECTSI1.090e-575.68CbbX protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D... [more]
M2W4M3_GALSU3.690e-541.89AAA-type ATPase family protein / ankyrin repeat fa... [more]
A0A7S3WP69_EMIHU4.270e-572.97Hypothetical protein n=3 Tax=Emiliania huxleyi Tax... [more]
R1D2D9_EMIHU4.300e-572.97ATPase_AAA_core domain-containing protein n=2 Tax=... [more]
R1FUU7_EMIHU5.860e-572.97AAA domain-containing protein n=1 Tax=Emiliania hu... [more]
A0A7S2IX56_9EUKA6.730e-572.97Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A7S0LAX6_9EUKA6.740e-572.97Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S2IY60_9EUKA6.780e-572.97Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig8052contigF-serratus_M_contig8052:3822..4990 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig8052.19460.1mRNA_F-serratus_M_contig8052.19460.1Fucus serratus malemRNAF-serratus_M_contig8052 3820..4990 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig8052.19460.1 ID=prot_F-serratus_M_contig8052.19460.1|Name=mRNA_F-serratus_M_contig8052.19460.1|organism=Fucus serratus male|type=polypeptide|length=165bp
DAWEARVRHGRTVAAHVFHWCSGNGQDHTVALRMGQILQRMGYCRQGHVA
VATRMISSDNTSATPPQNQVIRRRSAESFWLTKHTTCTTPPTKKTTDRNP
SRSSSMSWRSRRTTSSSPLPGTRTGWTVSSRTSPVCQPCWKPLISPTTAR
TSLSRSHRSWLGTWS
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