prot_F-serratus_M_contig805.19457.1 (polypeptide) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig805.19457.1 vs. uniprot
Match: A0A6H5L4H0_9PHAE (Coilin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4H0_9PHAE) HSP 1 Score: 120 bits (300), Expect = 1.080e-26 Identity = 58/94 (61.70%), Postives = 73/94 (77.66%), Query Frame = 0
Query: 7 PQQLPTPRRIRVIFSAETGCIPLTSPDLVKRWVVVPPELAVIGDLAHHLARLLERN--RKTASSALMLTLEGFILPPTESLAVLRETDIVTVEL 98
P +PRRIRV+F A+ GC+P ++P L KRW+ +PP L VIGDLAHHL R L+R RK SS+L+LTL+GF+LPPTESL VLRETD+VT+ L
Sbjct: 61 PAVASSPRRIRVVFKADAGCVPSSNPTLTKRWIFIPPRLTVIGDLAHHLTRQLKRRKGRKARSSSLVLTLDGFVLPPTESLDVLRETDVVTLTL 154
BLAST of mRNA_F-serratus_M_contig805.19457.1 vs. uniprot
Match: B8BP67_ORYSI (Coilin n=3 Tax=Oryza sativa TaxID=4530 RepID=B8BP67_ORYSI) HSP 1 Score: 63.5 bits (153), Expect = 1.390e-7 Identity = 38/106 (35.85%), Postives = 62/106 (58.49%), Query Frame = 0
Query: 6 QPQQLPTPR----RIRVIFSAETGCI-PLTSPDLVKRWVVVPPELAVIGDLAHHLARLLERNRKTASSALMLTLEGFILPPTESLAVLRETDIVTVELLAQTRDTQ 106
QP + TP R+R++F + L L + W+++PPEL+ + DLA H+A R R++ S ++L+++GF+LPP ES + R+ DI+ V+ A R TQ
Sbjct: 129 QPPPMATPPAQAVRLRLVFDNQRILRRSLRESGLRRCWLLLPPELSTVSDLAAHIAARF-RLRRSCPSCVILSIDGFVLPPFESTCIFRDNDIIRVKQKASKRITQ 233
BLAST of mRNA_F-serratus_M_contig805.19457.1 vs. uniprot
Match: A0A8I6X8P6_HORVV (Coilin n=2 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=A0A8I6X8P6_HORVV) HSP 1 Score: 63.2 bits (152), Expect = 1.790e-7 Identity = 33/94 (35.11%), Postives = 58/94 (61.70%), Query Frame = 0
Query: 4 SSQPQQLPTPRRIRVIFSAETGCIPLTSPDLVKRWVVVPPELAVIGDLAHHLARLLERNRKTASSALMLTLEGFILPPTESLAVLRETDIVTVE 97
++ P+ P+P R+R++F +T + DL + WV++ PELA + DL+ H+A +R + ++LT++GF LPP ES + R+ DI+ V+
Sbjct: 2 ATPPEPSPSPVRLRLVFD-KTRLLRRAQRDLRRCWVLLRPELATVADLSAHVATRFRLHR-SCPGGVVLTMDGFALPPFESTCIFRDKDIIRVK 93
BLAST of mRNA_F-serratus_M_contig805.19457.1 vs. uniprot
Match: A0A452ZID7_AEGTS (Coilin n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A452ZID7_AEGTS) HSP 1 Score: 62.0 bits (149), Expect = 2.260e-7 Identity = 34/100 (34.00%), Postives = 59/100 (59.00%), Query Frame = 0
Query: 4 SSQPQQLPTPRRIRVIFSAETGCIPLTSPDLVKRWVVVPPELAVIGDLAHHLARLLERNRKTASSALMLTLEGFILPPTESLAVLRETDIVTVELLAQTR 103
++ P P+P R+R++F +T + DL + W+++ PELA + DL+ H+A +R + ++LT++GF LPP ES + R+ DI+ V+ A R
Sbjct: 28 ATPPAXXPSPVRLRLVFD-KTRLLRRAQRDLRRCWLLLRPELATVADLSAHVAARFRLHR-SCPGGVVLTMDGFALPPFESTCIFRDKDIIRVQQKACKR 125
BLAST of mRNA_F-serratus_M_contig805.19457.1 vs. uniprot
Match: A0A0E0RG41_ORYRU (Coilin n=7 Tax=Oryza TaxID=4527 RepID=A0A0E0RG41_ORYRU) HSP 1 Score: 62.0 bits (149), Expect = 4.230e-7 Identity = 34/93 (36.56%), Postives = 57/93 (61.29%), Query Frame = 0
Query: 15 RIRVIFSAETGCI-PLTSPDLVKRWVVVPPELAVIGDLAHHLARLLERNRKTASSALMLTLEGFILPPTESLAVLRETDIVTVELLAQTRDTQ 106
R+R++F + L L + W+++PPEL+ + DLA H+A R R++ S ++L+++GF+LPP ES + R+ DI+ V+ A R TQ
Sbjct: 10 RLRLVFDNQRILRRSLRESGLRRCWLLLPPELSTVSDLAAHIAARF-RLRRSCPSCVILSIDGFVLPPFESTCIFRDNDIIRVKQKASKRITQ 101
BLAST of mRNA_F-serratus_M_contig805.19457.1 vs. uniprot
Match: A0A3B5ZYF5_WHEAT (Coilin n=23 Tax=Triticinae TaxID=1648030 RepID=A0A3B5ZYF5_WHEAT) HSP 1 Score: 61.6 bits (148), Expect = 5.700e-7 Identity = 34/100 (34.00%), Postives = 59/100 (59.00%), Query Frame = 0
Query: 4 SSQPQQLPTPRRIRVIFSAETGCIPLTSPDLVKRWVVVPPELAVIGDLAHHLARLLERNRKTASSALMLTLEGFILPPTESLAVLRETDIVTVELLAQTR 103
++ P P+P R+R++F +T + DL + W+++ PELA + DL+ H+A +R + ++LT++GF LPP ES + R+ DI+ V+ A R
Sbjct: 2 ATPPAPSPSPVRLRLVFD-KTRLLRRAQRDLRRCWLLLRPELATVADLSAHVAARFRLHR-SCPGGVVLTMDGFALPPFESTCIFRDKDIIRVQQKACKR 99
BLAST of mRNA_F-serratus_M_contig805.19457.1 vs. uniprot
Match: UPI0019D6AB8C (coilin-like isoform X1 n=3 Tax=Panicum virgatum TaxID=38727 RepID=UPI0019D6AB8C) HSP 1 Score: 61.2 bits (147), Expect = 7.600e-7 Identity = 40/114 (35.09%), Postives = 62/114 (54.39%), Query Frame = 0
Query: 7 PQQLPTPRRIRVIFSAETGCIPLTSPD--LVKRWVVVPPELAVIGDLAHHLARLLERNRKTASSALMLTLEGFILPPTESLAVLRETDIVTVE-----LLAQTRDTQSCRDGEI 113
P P P R+R++F + T D L + W+++ PELA + DLA H+A R R+ SS ++L+++GF LPP ES + R+ DI+ V+ L D S +D E+
Sbjct: 5 PPDAPAPVRLRLVFE-NRRLLRRTERDEGLRRCWLLLRPELATVADLASHVAARF-RLRRFCSSGIILSMDGFALPPFESTCIFRDNDIIRVKPKSCKKLVGHNDVHSIQDPEV 116
BLAST of mRNA_F-serratus_M_contig805.19457.1 vs. uniprot
Match: A0A0P0Y9A7_ORYSJ (Coilin n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=A0A0P0Y9A7_ORYSJ) HSP 1 Score: 56.2 bits (134), Expect = 1.210e-6 Identity = 29/81 (35.80%), Postives = 51/81 (62.96%), Query Frame = 0
Query: 15 RIRVIFSAETGCI-PLTSPDLVKRWVVVPPELAVIGDLAHHLARLLERNRKTASSALMLTLEGFILPPTESLAVLRETDIV 94
R+R++F + L L + W+++PPEL+ + DLA H+A R R++ S ++L+++GF+LPP ES + R+ DI+
Sbjct: 10 RLRLVFDNQRILRRSLRESGLRRCWLLLPPELSTVSDLAAHIAARF-RLRRSCPSCVILSIDGFVLPPFESTCIFRDNDII 89
BLAST of mRNA_F-serratus_M_contig805.19457.1 vs. uniprot
Match: A0A3L6G677_MAIZE (Coilin n=1 Tax=Zea mays TaxID=4577 RepID=A0A3L6G677_MAIZE) HSP 1 Score: 57.8 bits (138), Expect = 3.940e-6 Identity = 37/113 (32.74%), Postives = 62/113 (54.87%), Query Frame = 0
Query: 7 PQQLPTPRRIRVIFSAETGCIPLTSPDLVKR-WVVVPPELAVIGDLAHHLARLLERNRKTASSALMLTLEGFILPPTESLAVLRETDIVTVELLAQTR-----DTQSCRDGEI 113
P P P R+R+IF + + ++R W+++ PELA + +LA H+A R R+T ++L+++GF LPP ES + R+ DI+ V+ + T+ D +D EI
Sbjct: 5 PPAAPAPVRLRLIFENSRLLRRVQRDEGLRRCWLLLSPELATVANLAAHVAARF-RLRRTCPRGVVLSMDGFTLPPFESTCIFRDNDIIRVKQKSCTKHIEHNDVHCIQDHEI 116
BLAST of mRNA_F-serratus_M_contig805.19457.1 vs. uniprot
Match: A0A811QXN9_9POAL (Coilin n=1 Tax=Miscanthus lutarioriparius TaxID=422564 RepID=A0A811QXN9_9POAL) HSP 1 Score: 58.9 bits (141), Expect = 4.650e-6 Identity = 37/113 (32.74%), Postives = 63/113 (55.75%), Query Frame = 0
Query: 7 PQQLPTPRRIRVIFSAETGCIPLTSPDLVKR-WVVVPPELAVIGDLAHHLARLLERNRKTASSALMLTLEGFILPPTESLAVLRETDIVTVELLAQTR-----DTQSCRDGEI 113
P +P P R+R++F + + ++R W+++ PELA + DLA H+A R R+T ++L+++GF LPP ES + R+ DI+ V+ + T+ D +D EI
Sbjct: 5 PPAVPAPVRLRLLFENSRLLRRVQRDEGLRRCWLLLSPELATVADLAAHVAARF-RLRRTCPWGVVLSMDGFTLPPFESTCIFRDNDIIRVKQKSCTKQVGHNDVHCIQDHEI 116 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig805.19457.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 16
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_F-serratus_M_contig805.19457.1 ID=prot_F-serratus_M_contig805.19457.1|Name=mRNA_F-serratus_M_contig805.19457.1|organism=Fucus serratus male|type=polypeptide|length=293bpback to top |