mRNA_F-serratus_M_contig804.19439.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig804.19439.1 vs. uniprot
Match: D7FSK6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK6_ECTSI) HSP 1 Score: 224 bits (570), Expect = 1.280e-60 Identity = 163/412 (39.56%), Postives = 205/412 (49.76%), Query Frame = 1
Query: 1384 GNVSIARLGNHSSRVFVSIFDIGRQVLIEARDFEGGPILASSTVSLEIWTAATGVPALRPPIDQNAFQERLRDRLATLLGAGCSSRTDRFTKQRLATQTKSQRARQSRYG-LWQHSE-------QVTIDDRENELGVKAVSEILAHASLPPTSTTT--TSLDAGLLTRKRALKLEMLKRMIKGFHLKHGRRDERTGRIIPVESAHEDGDCAEGSRELPDAETTTYVQEARQKIGQGGDNNVLSLPGIAKGGFPPSLPGSAGRLSVPTAPSSQTRLDEKEAFLDGTSNPLPPAALVCVCCGRTGGRGHGRRCAHVYRNCGFCRVNEVKRLLLITEPKRKRG---ESGDISAVSAAEEYRGDRDDDD---EQYEWVTDXXXXDPEFKCDGCGRLIKGIDDRFHCDTCGDYDLCQ 2571
G V IARLG+H+ VFV + D GR++LIEARDFE GP+LA STVSLE WTA TG+ L PP D AF++ L ++LA LLGAG SRT R ++R A + + Q G L + SE Q+ DD +E A+ PP + D+ L +KRAL+LEML RM+ FH KHGR G A G P TT + GG + G P + + G+ DG ++P A GGRGHGR+C H +R CGFCRV EV+R+L I P R R ES + S + GD DDD E +EWVTD DPEF+CD CGR+I+ DRFHC+TCGDYDL Q
Sbjct: 2 GTVPIARLGSHAEGVFVVVTDGGRRLLIEARDFERGPLLAKSTVSLEDWTATTGIATLSPPTDNRAFKKILEEQLAALLGAGFRSRTSRLERKRAAREAQQQGGGVRWRGTLLELSEMEKGRLGQLEEDDNGSENND-------ANPDRPPPKLPLLLSPRDSTPLEQKRALRLEMLTRMVDDFHAKHGRSRRXXXXXXXXXEKRGVGAPAPGDARDP---TTVVATGCDDESAVGGHDGERVREG------PVHIVSNEGQ--------------------DGENDPHITTANQAK-----GGRGHGRKCEHTFRRCGFCRVEEVRRVLGIRAPGRTREPVQESMVVRVPSLPQLKFGDDQDDDNEEEDFEWVTDSDEEDPEFECDSCGRVIEDTSDRFHCETCGDYDLMQ 372
BLAST of mRNA_F-serratus_M_contig804.19439.1 vs. uniprot
Match: A0A6H5KMB6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMB6_9PHAE) HSP 1 Score: 205 bits (521), Expect = 9.050e-55 Identity = 149/362 (41.16%), Postives = 185/362 (51.10%), Query Frame = 1
Query: 682 VVKTNGDALTLSLCQPLLKSSSLGDAPGEASKPIGT-GSIAGAIGREGYHRK---------RRWVALEVAWRDWAGLGYGPLQWMSHAQKQIIGALALSWVSF--DSRGLDEGNAG-----------------AFLELRSTLASVRRVVGMSA---------------------------KTAVAAAPGDNSE-------GIKSRVMVRDEGQVLRVDV-----EAVGQIQSLRRRWSRSFGKEAWEETGLGDLLWMNWTWRRYLAIRLSHQVSTFSECIEDGSGERE----------RLVIRTPLAVLYWCGNVSIARLGNHSSRVFVSIFDIGRQVLIEARDFEGGPILASSTVSLEIWT 1533
+VK G LTLSL QP S + G ++P G G A A G H RR + L AW DWA GYGPLQWMSH QK I L+L WVSF +RG +E NA AFL L+SV R VG S+ T+ AP SE SRV+VRDEG VLRV+V + VG+ +S ++FGKE+W ETGLG+LLW++ + R+YLA+RL+ QV+ + DG G + RLVI + L + YW G V IARLG+H+ VFV I D GR++LIEARDFEGGP+LA STVSLE WT
Sbjct: 1 MVKATGGELTLSLFQP----SRAAPSTGGTTRPAGVRGRGAAAANGSGVHSTAGDPGRAAMRRSLTLVAAWADWAEAGYGPLQWMSHEQKVFIARLSLYWVSFRTPARGFEEKNAPNANETPVRHRRRRTTKEAFLHFHPILSSVTRDVGKSSGAPGSSVRGTGXXXXXXXXXXXXXXXXXTSSRTAPRGGSEIFGGEETSRTSRVLVRDEGGVLRVEVVEAERKNVGRSKSGVSMLDQAFGKESWRETGLGELLWLDCSCRQYLALRLAQQVAIVVDDDRDGRGGQHDQDNVLKIKPRLVIISDLPLPYWMGTVPIARLGSHAEGVFVMITDAGRRLLIEARDFEGGPLLAKSTVSLEDWT 358
BLAST of mRNA_F-serratus_M_contig804.19439.1 vs. uniprot
Match: D7FSK7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK7_ECTSI) HSP 1 Score: 122 bits (307), Expect = 1.790e-27 Identity = 84/211 (39.81%), Postives = 106/211 (50.24%), Query Frame = 1
Query: 835 RRWVALEVAWRDWAGLGYGPLQWMSHAQKQIIGALALSWVSFDSRGLDEGNAG-----------------AFLELRSTLASVRRVVGMSAKTAVAAAPGDNSEGI---------------------------KSRVMVRDEGQVLRVDVEAVGQIQSLRRRWSR----------SFGKEAWEETGLGDLLWMNWTWRRYLAIRLSHQVSTF 1305
RR ++L AW DWA GYGPLQWMSH QK I L+L WVSF RG +E NA AFL R L+SV RVVG S +A PG G SRV VRDEG VLRV+V +++ R+ R +FGKEAW ETGL +LLW++ + R+YLA+RL+ Q+S++
Sbjct: 2 RRSLSLVAAWADWAEAGYGPLQWMSHEQKVFIARLSLYWVSF-RRGFEEKNAPTANETPVQHHRRRTTKEAFLHFRPILSSVTRVVGKSNGDPGSAVPGTGGSGALVVVGGASSRTVPREGSEIFGGGETSRTSRVFVRDEGGVLRVEV-----VEAERKNGGRPKSGVSILDEAFGKEAWRETGLEELLWLDCSCRQYLALRLAQQLSSW 206
BLAST of mRNA_F-serratus_M_contig804.19439.1 vs. uniprot
Match: A0A6H5KMF7_9PHAE (Glyco_tran_28_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMF7_9PHAE) HSP 1 Score: 108 bits (269), Expect = 2.030e-24 Identity = 54/70 (77.14%), Postives = 61/70 (87.14%), Query Frame = -1
Query: 2720 VAGLGKALVVVVNTALMDNHQVELAEALAERGYLRATTPEVLARTLEEFDDSPSARTPYPPAQPQAFAAL 2929
++GLGKALVVVVN ALMDNHQ ELA+ALA+R YLRATTPE LA L E DDSPSAR PYPPA+P+AFAA+
Sbjct: 4 LSGLGKALVVVVNRALMDNHQEELADALAQRNYLRATTPEGLAGALVELDDSPSARRPYPPAKPEAFAAI 73
BLAST of mRNA_F-serratus_M_contig804.19439.1 vs. uniprot
Match: D7FSK5_ECTSI (N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK5_ECTSI) HSP 1 Score: 107 bits (267), Expect = 4.880e-23 Identity = 54/68 (79.41%), Postives = 59/68 (86.76%), Query Frame = -1
Query: 2720 GLGKALVVVVNTALMDNHQVELAEALAERGYLRATTPEVLARTLEEFDDSPSARTPYPPAQPQAFAAL 2923
GLGKALVVVVN ALMDNHQ ELA+ALA+R YLRATTPE LA L E DDSPSAR PYPPA+P+AFAA+
Sbjct: 93 GLGKALVVVVNRALMDNHQEELADALAQRNYLRATTPEGLAGALVELDDSPSARRPYPPAKPEAFAAI 160
BLAST of mRNA_F-serratus_M_contig804.19439.1 vs. uniprot
Match: A0A7R9TAB8_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TAB8_9VIRI) HSP 1 Score: 68.9 bits (167), Expect = 1.580e-9 Identity = 42/70 (60.00%), Postives = 43/70 (61.43%), Query Frame = -1
Query: 2711 LGKALVVVVNTALMDNHQVELAEALAERGYLRATTPEVLARTLEEFDDSPSARTPYPPAQPQAFAALNSG 2920
L K LVVVVN ALMDNHQ ELA ALA RGYL +TTP L LE D S A PYP P A A SG
Sbjct: 113 LKKPLVVVVNEALMDNHQQELAGALASRGYLVSTTPARLVSALETLDTS--ALKPYPGGDPAAVAQAVSG 180
BLAST of mRNA_F-serratus_M_contig804.19439.1 vs. uniprot
Match: W1PWL3_AMBTC (Glyco_tran_28_C domain-containing protein n=4 Tax=Amborella trichopoda TaxID=13333 RepID=W1PWL3_AMBTC) HSP 1 Score: 68.9 bits (167), Expect = 2.060e-9 Identity = 37/67 (55.22%), Postives = 43/67 (64.18%), Query Frame = -1
Query: 2720 LGKALVVVVNTALMDNHQVELAEALAERGYLRATTPEVLARTLEEFDDSPSARTPYPPAQPQAFAAL 2920
LGK L+VVVNTALMDNHQ ELAE LAER +L P+ L T++ D PYPP+ P A A L
Sbjct: 124 LGKPLIVVVNTALMDNHQSELAEELAERKHLLCAYPDTLYETIQNMDLD--TLVPYPPSNPMAVAKL 188
BLAST of mRNA_F-serratus_M_contig804.19439.1 vs. uniprot
Match: A0A0L6WK48_9AGAR (UDP-N-acetylglucosamine transferase subunit ALG13 n=1 Tax=Termitomyces sp. J132 TaxID=1306850 RepID=A0A0L6WK48_9AGAR) HSP 1 Score: 66.6 bits (161), Expect = 7.340e-9 Identity = 37/70 (52.86%), Postives = 46/70 (65.71%), Query Frame = -1
Query: 2720 VAGLGKALVVVVNTALMDNHQVELAEALAERGYLRATTPEVLARTLEEFDDSPSARTPYPPAQPQAFAAL 2929
V LGK L+ VVN L+DNHQ ELA ALAE G+L+ + LA+T+E FD PS+ TP+PP FA L
Sbjct: 96 VLRLGKPLLTVVNPTLLDNHQQELASALAELGHLQVSNVVDLAQTIETFD--PSSLTPFPPFDGSRFAKL 163
BLAST of mRNA_F-serratus_M_contig804.19439.1 vs. uniprot
Match: A0A8H4QQX0_9AGAR (UDP-N-acetylglucosamine transferase subunit ALG13 n=1 Tax=Agrocybe pediades TaxID=84607 RepID=A0A8H4QQX0_9AGAR) HSP 1 Score: 66.6 bits (161), Expect = 7.500e-9 Identity = 42/119 (35.29%), Postives = 63/119 (52.94%), Query Frame = -1
Query: 2720 SYVVNRKSVSLRATSDVTLAVHKFKASID-----VGIPCSR*RNGLVAG---LGKALVVVVNTALMDNHQVELAEALAERGYLRATTPEVLARTLEEFDDSPSARTPYPPAQPQAFAAL 3052
S V+ + + V + +KFK S+ + S +G + +GK ++VV N L+DNHQ ELA AL E GYL+ATT + LA+T+++FD S P+PP FA +
Sbjct: 48 SLVIQNGGTQRMSRAGVDIEFYKFKPSLQEDYDRADLVISHAGSGTILDVRRMGKPMIVVPNPTLLDNHQAELASALEEMGYLKATTVDGLAQTIKDFDASKIK--PFPPFNGSRFAKI 164
BLAST of mRNA_F-serratus_M_contig804.19439.1 vs. uniprot
Match: A0A167L3H1_CALVF (UDP-N-acetylglucosamine transferase subunit ALG13 n=1 Tax=Calocera viscosa (strain TUFC12733) TaxID=1330018 RepID=A0A167L3H1_CALVF) HSP 1 Score: 65.9 bits (159), Expect = 1.160e-8 Identity = 33/66 (50.00%), Postives = 42/66 (63.64%), Query Frame = -1
Query: 2720 GKALVVVVNTALMDNHQVELAEALAERGYLRATTPEVLARTLEEFDDSPSARTPYPPAQPQAFAAL 2917
GK L+ V NT+LMDNHQ ELA+ALA++GY+ TPE L L F PS TP+PP F ++
Sbjct: 93 GKPLIAVPNTSLMDNHQAELADALAKQGYIGVATPETLPEALVAF--KPSQLTPFPPFDGSKFLSI 156 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig804.19439.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig804.19439.1 >prot_F-serratus_M_contig804.19439.1 ID=prot_F-serratus_M_contig804.19439.1|Name=mRNA_F-serratus_M_contig804.19439.1|organism=Fucus serratus male|type=polypeptide|length=756bp MTPASDDYSAPTSRTSSHPSNTHKGDQIWDLCSSGAPSGLCSCRVVMRAGback to top mRNA from alignment at F-serratus_M_contig804:177369..183029- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig804.19439.1 ID=mRNA_F-serratus_M_contig804.19439.1|Name=mRNA_F-serratus_M_contig804.19439.1|organism=Fucus serratus male|type=mRNA|length=5661bp|location=Sequence derived from alignment at F-serratus_M_contig804:177369..183029- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig804:177369..183029- >mRNA_F-serratus_M_contig804.19439.1 ID=mRNA_F-serratus_M_contig804.19439.1|Name=mRNA_F-serratus_M_contig804.19439.1|organism=Fucus serratus male|type=CDS|length=4536bp|location=Sequence derived from alignment at F-serratus_M_contig804:177369..183029- (Fucus serratus male)back to top |