prot_F-serratus_M_contig802.19424.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig802.19424.1
Unique Nameprot_F-serratus_M_contig802.19424.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length724
Homology
BLAST of mRNA_F-serratus_M_contig802.19424.1 vs. uniprot
Match: D7FML5_ECTSI (Putative: similar to cytoplasmic dynein intermediate chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FML5_ECTSI)

HSP 1 Score: 890 bits (2301), Expect = 0.000e+0
Identity = 492/720 (68.33%), Postives = 549/720 (76.25%), Query Frame = 0
Query:    1 MADAEAVRKQRQKQLDDKRRRLDELRQRKKAKEIAAKVASDTAPVPPPTDDFDPDKSWYSAADDTNASKGGADLDAYIKSLLETPAVGGASAXXXXXXXXXXXPANESFSTS--RSDGRIAERLSSLTITTGLAVVNVMPKSVEFYDKACQADLGGATEDVDVETSNGINGINR--STLTPSAKKTPDKRRNHLRVFGRGGKGVPVFGHDTNSSDAEDLGHSSGGGPSLVAAASPLRSGGSRPMVSTPVGKAGRWP-DG-GGLLPFPMTPPPQQLSSAANKDKGKDLSSDQKREILQTDHFQDFLRRSSRVLERALGEREALDVLADYAAGEGDSTLRGDQGQRLNEAMTLHEDRWCQERALTDLQWSPHRPELVLTSYSARGHSVEAPSSSSLLTTTNTDADGLVLVWSLAMQHRPEFQLSSQSPVLTARFHPYDPHVIIGGTYSGQVVEWDTRAKSLPVQRTPLSATGHTYPVYNLHIGGTANSPSLLTASTDGRVSTWNPSQLNQPLQVMQLSHDGAPVTISTMAVAEGDEQKHPKQLVVGSESGAIYTTPLHFRKSGAVEKYEGHYGLVTSVDANPSALKSLRGLVLSSSVDWTTRLWRLGKG-NAPVQTHTHGTYDYVCDAKWSPKHPALFVTANISGELGLWNLNHSMEEPFAPPVKAVDRCALTRMAWSPDGRRLCVGDSKGYARVFNVDQETALPRPDDEVKLEATLAAMTN 713
            MADA+AVR+QRQKQL+DKRRRLD L           K+ASD A     T     D    +AA  +  + GGADLDAYIKSLL TPA GG +             +  +  +S   SD R A+RLSSLTI  GL  V+V PKS EFYDK CQADLGGA       T+    G++   +  + SAK+TPDKRRNH RVFGRGGKGVPV     + S+ EDLG+   G PSLVAA+SP R G  +P+ STP  ++GRW  DG GG+   PMTPP    ++AA     K LS D+K+EI+QTDHFQDFLRRSSRVLERALGE+EALDVL DYA  EGDS  RGDQGQRLNEAMTLHEDRWCQER+LTDLQWSPH PELVL SY+ARGH ++A SSS+L    +TDADGLVLVWS+AMQHRPE+QLSSQSPVLTARFHP+D HVIIGGTYSGQVV WDTRAKSLPVQRTPLSATGHTYPVYNLHIGGT N+PSLLTAST+GRVST                  G PVTIS+MAVA+GDEQK+   +VVGSESG IYTTPLHFR SG VE+Y GHYGLVTSVDANPSA K LRGLVLSSSVDWTTRLWRLG+G NA VQT THGTYDYVCDAKWSPKHPALFVTANISGELGLWNLNHSMEEPF PPVK VDRCALTRMAWSPDGRRLCVGD+KGYARVFN+DQETALPR D++++LEA LA   N
Sbjct:    1 MADADAVRQQRQKQLEDKRRRLDALXXXXXXXXXXXKIASDAAA----TAQKQADGEAENAAPGSPVATGGADLDAYIKSLLSTPAPGGGAEEDGRSPPPAPGVSTSTGGSSWAGSDRRAADRLSSLTIVCGLGSVDVAPKSTEFYDKGCQADLGGAAGTGAQGTAGADEGVDAVGAQSSSSAKRTPDKRRNHRRVFGRGGKGVPV----PDGSEGEDLGYPPSGAPSLVAASSPSRPGVRQPVASTPGSRSGRWTGDGTGGMTALPMTPP----ATAA-----KPLSVDEKKEIVQTDHFQDFLRRSSRVLERALGEKEALDVLLDYAGDEGDSG-RGDQGQRLNEAMTLHEDRWCQERSLTDLQWSPHHPELVLASYTARGHGLDATSSSAL----HTDADGLVLVWSMAMQHRPEYQLSSQSPVLTARFHPFDTHVIIGGTYSGQVVVWDTRAKSLPVQRTPLSATGHTYPVYNLHIGGTDNAPSLLTASTEGRVSTXXXXXXXXXXXXXXXXXXGKPVTISSMAVAQGDEQKN---IVVGSESGGIYTTPLHFRNSGVVEEYSGHYGLVTSVDANPSASKPLRGLVLSSSVDWTTRLWRLGQGSNACVQTLTHGTYDYVCDAKWSPKHPALFVTANISGELGLWNLNHSMEEPFTPPVKVVDRCALTRMAWSPDGRRLCVGDAKGYARVFNMDQETALPRTDEDLRLEAALAVKAN 695          
BLAST of mRNA_F-serratus_M_contig802.19424.1 vs. uniprot
Match: A0A836C896_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C896_9STRA)

HSP 1 Score: 399 bits (1026), Expect = 9.790e-129
Identity = 205/434 (47.24%), Postives = 286/434 (65.90%), Query Frame = 0
Query:  292 TDHFQDFLRRSSRVLERALGEREALDVLADYAAGEGDSTLRGDQGQRLNEAMTLHEDRWCQERALTDLQWSPHRPELVLTSYSA--RGHSVEAPSSSSLL---TTTNTDADGLVLVWSLAMQHRPEFQLSSQSPVLTARFHPYDPHVIIGGTYSGQVVEWDTRAKSLPVQRTPLSATGHTYPVYNLHIGGTANSPSLLTASTDGRVSTWNPSQLNQPLQVMQLS-------HDGAPVTISTMAVAEGDEQKHPKQLVVGSESGAIYTTPLHFRKSGAVEKYEGHYGLVTSVDANPSALKSLRGLVLSSSVDWTTRLWRLGKGNAPVQTHTHGTYDYVCDAKWSPKHPALFVTANISGELGLWNLNHSMEEPFAPPVKAVDRCALTRMAWSPDGRRLCVGDSKGYARVFNVDQETALPRPDDEVKLEATLAAMTN 713
            TD F  FL+R   V+ERAL E+   D+L DY+ G       G    +L++ +  ++  WC +RA+TD+ WSPH PEL+L +YSA  RG ++E    S+LL      +   DGLVLVWSLA+  RPEF L SQSP+LTARFH +D H+++GG+YSGQVV WD RA SLPVQ+TP+S   HT P++ + + GT  + +L+TASTDGRV+ WNP QL QP +V+QL+         G  +++S +A   G+      QL+VG +SG I    +H   +G   ++ GH+G+VT++D NPS  K+L+ LVLSSS+DWTTRLW L + + P+ T +H +YDYVCD +WSP HPALF TAN++G+L LWN+  S++ P  PP K V   ALT++AWS +G RL  GD  G   V+ + ++ ALPR D+E +LE  L  +T+
Sbjct:   54 TDSFSKFLKRCGTVVERALTEQATFDILKDYSKGATSERTHG--SDQLHKLLRFYDPTWCGDRAITDVHWSPHYPELLLVAYSASGRGQNLE----SALLGAPAAGDAHPDGLVLVWSLALPSRPEFILYSQSPILTARFHEFDAHLVVGGSYSGQVVTWDLRATSLPVQQTPVSDAAHTRPIFGMAMEGTGAAHALVTASTDGRVAWWNPRQLLQPNEVLQLALAQSDNDASGGGLSVSCIACVPGETV----QLLVGMDSGRILAVAVHTHSAGVQREFHGHFGMVTALDTNPSKAKALQELVLSSSMDWTTRLWSLRQSDKPLVTFSHDSYDYVCDVRWSPVHPALFATANVAGDLTLWNVTASLDTPVTPPCK-VSGNALTKLAWSREGCRLAAGDVTGAVHVYAIAEDMALPRHDEEHRLERLLHELTS 476          
BLAST of mRNA_F-serratus_M_contig802.19424.1 vs. uniprot
Match: D3AZM5_POLPP (Cytoplasmic dynein intermediate chain n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3AZM5_POLPP)

HSP 1 Score: 323 bits (829), Expect = 2.070e-97
Identity = 186/458 (40.61%), Postives = 272/458 (59.39%), Query Frame = 0
Query:  264 PPPQQLSSAANKDKGKDLSSDQKREILQTDHFQDFLRRSSRVLERALGEREALDVLADYAAGEGDSTLRGDQGQRLNEAMTLHEDRWCQERALTDLQWSPHRPELVLTSYSARGHSVEAPSSSSLLTTTNTDADGLVLVWSLAMQ-HRPEFQLSSQSPVLTARFHPYDPHVIIGGTYSGQVVEWDTRAKSLPVQRTPLSATGHTYPVYNLHIGGTANSPSLLTASTDGRVSTWNPSQLNQPLQVMQLSHDGAPVTISTMAVAEGDEQKHPKQ----LVVGSESGAIYTTPLHFRKSGAVEKYEGHYGLVTSVDANPSALKS--LRGLVLSSSVDWTTRLWRLGKGNAPVQTHTHGTYDYVCDAKWSPKHPALFVTANISGELGLWNLNHSMEEPFAPPVKAVDRCALTRMAWSPDGRRLCVGDSKGYARVFNVDQETALPRPDDEVKLEATLAAMTNR 714
            P   + SS++N+ +   L+   K  IL++D F+ F  R+S+V+ERAL   +++D+L DY   + +S       + L    TL ++RW + R++TD+ WSP  PELV+TSYSA     EA S          D DG+VLVW++     +PE+  + QSPV+T  F  Y P +I+GGTYSGQ+V WDTR+KS PVQRTPLS+ GHT+PVY++ + G+AN+ SL++ STDG++ +W+   L+QP++ + L+      T+ST           P+       VG+E G IY    H  K+G  E+++ HYG VTS+D +P +  S     L LSSS DWT RLW   K + P+ +    T DYV DA+WSP +P++F T + SG+L LW+LN   E P     K   R +L R++WS DGRRL VGDS G   +++  Q  A P+ DD  K    +  +T++
Sbjct:  185 PEAAEESSSSNEPEIIVLNDLDKSNILESDSFKSFFSRTSKVIERALCLDDSIDILVDYTKSDEESKS---SSKELTLIGTLQDERWSKHRSVTDINWSPKHPELVVTSYSAN----EAGSH---------DPDGVVLVWTVNNYFQKPEYVFNCQSPVMTTFFSRYHPTLIVGGTYSGQIVVWDTRSKSTPVQRTPLSSVGHTHPVYSMAVVGSANANSLVSISTDGKLCSWSLDNLSQPIETLDLNSRANTATVSTTTSIAVTSLVFPETEMNTFYVGTEEGVIYQAQAHGAKAGVNERFKAHYGPVTSIDFHPPSRNSSEFSNLFLSSSTDWTCRLWSSSKPDQPIYSFEDYT-DYVFDARWSPVNPSIFATGDGSGQLALWDLNEETEAPIFR-AKTSSR-SLNRLSWSADGRRLLVGDSGGQLSLYDSSQ-FASPQVDDWTKFGEVINKLTSK 622          
BLAST of mRNA_F-serratus_M_contig802.19424.1 vs. uniprot
Match: F4PS77_CAVFA (Cytoplasmic dynein intermediate chain n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PS77_CAVFA)

HSP 1 Score: 319 bits (818), Expect = 6.710e-96
Identity = 177/428 (41.36%), Postives = 263/428 (61.45%), Query Frame = 0
Query:  280 DLSSDQKREILQTDHFQDFLRRSSRVLERALGEREALDVLADYAAGEGDSTLRGDQGQRLNEAMTLHEDRWCQERALTDLQWSPHRPELVLTSYSARGHSVEAPSSSSLLTTTNTDADGLVLVWSLA-MQHRPEFQLSSQSPVLTARFHPYDPHVIIGGTYSGQVVEWDTRAKSLPVQRTPLSATGHTYPVYNLHIGGTANSPSLLTASTDGRVSTWNPSQLNQPLQVMQLS--HDGAPVTISTMAVAEGD---EQKHPKQLVVGSESGAIYTTPLHFRKSGAVEKYEGHYGLVTSVDANPSALK-SLRGLVLSSSVDWTTRLWRLGKGNAPVQTHTHGTYDYVCDAKWSPKHPALFVTANISGELGLWNLNHSMEEPFAPPVK-AVDRCALTRMAWSPDGRRLCVGDSKGYARVFNVDQETALPRPD 699
            +L   +K+EIL+++ F+ F  RSS+V+ERAL   + +D+L DY   + +        + L    TL ++RW + R++TD+ WSP  PELV+TSYSA               T + D DG+VLVWS+     +PE+  + QSPV+T  F  + P +I+GGTYSGQ+V WDTR+KS PVQRTPLS+ GHT+PVY++ + G+ N+ +L++ STDG++ +WN   L+QP++ + L+  ++ +    +T ++A      ++       VGSE G+IY    H  K+G  ++Y+GH+G +TS+D +PS        L LSSS DWTTRLW   K  APV +      DYV DA+WSP HP++FVT + +G++ LW+LN   EE  AP V+  +   AL R++WS DG+RL VGDS G   +++     A P PD
Sbjct:  197 ELDEQEKKEILESESFRTFFTRSSKVIERALMLDDNIDILVDYTKTDDEDKS---SSKELKLMGTLVDERWSKHRSVTDINWSPKHPELVVTSYSANE-------------TGSHDPDGVVLVWSVNNFYQKPEYVFNCQSPVMTTFFSRFHPTLIVGGTYSGQIVVWDTRSKSTPVQRTPLSSVGHTHPVYSMSVVGSTNANTLISVSTDGKLCSWNLDNLSQPVETLDLNAKNNTSSTVSATSSIAVTSLVFQETEMNAFFVGSEDGSIYQAHRHGSKTGISDRYKGHHGPITSIDFHPSRGSIDFGNLFLSSSTDWTTRLWSTNKTEAPVYSF-EDYVDYVYDARWSPVHPSVFVTGDGNGQMCLWDLN---EETDAPIVRNKISSHALNRLSWSGDGKRLLVGDSTGQLSLYDTSPY-ANPEPD 603          
BLAST of mRNA_F-serratus_M_contig802.19424.1 vs. uniprot
Match: UPI0006449257 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006449257)

HSP 1 Score: 311 bits (798), Expect = 5.940e-93
Identity = 176/446 (39.46%), Postives = 264/446 (59.19%), Query Frame = 0
Query:  274 NKDKGKDLSSDQKREILQTDHFQDFLRRSSRVLERALGEREALDVLADYAAGEGDSTLRGDQGQRLNEAMTLHEDRWCQERALTDLQWSPHRPELVLTSYSARGHSVEAPSSSSLLTTTNTDADGLVLVWSLAMQ-HRPEFQLSSQSPVLTARFHPYDPHVIIGGTYSGQVVEWDTRAKSLPVQRTPLSATGHTYPVYNLHIGGTANSPSLLTASTDGRVSTWNPSQLNQPLQVMQLSHDGAPVTISTMAVAEGD---EQKHPKQLVVGSESGAIYTTPLHFRKSGAVEKYEGHYGLVTSVDANPS-ALKSLRGLVLSSSVDWTTRLWRLGKGNAPVQTHTHGTYDYVCDAKWSPKHPALFVTANISGELGLWNLNHSMEEPFAPPVKAVDRCALTRMAWSPDGRRLCVGDSKGYARVFNVDQETALPRPDDEVKLEATLAAMTNR 714
            N+ + ++LS   K  IL++D F+ F  RSS+V+ERAL   +++D+L DY   +    +     + L    TL ++RW + R++TD+ WSP  PELV+TSYS+     EA S          D DG+VLVWS+     +PE+  + QSPV+T  F  +   +I+GGTYSGQ+V WDTR+KS PVQRTPLS+ GHT+PVY++ + G+AN+ SL++ STDG++ +W+   L+QP++ + L+        +T ++A       +       VG+E G IY    H  K+G  E+++GHYG +TSVD +PS        L LSSS DWT +LW   K   P+ +      +YV DA+WSP  P++F T + SG+L LW+LN   E P    +K   R +L R++WS DG+RL  GDS G   +++  Q  A P+PDD  +    +  +T++
Sbjct:  194 NEPQIEELSEHDKNNILESDSFRSFFSRSSKVIERALYLDDSIDILVDYTKSD---EVTKSSTKELTLVGTLADERWTKHRSVTDINWSPKHPELVVTSYSSN----EAGSH---------DPDGVVLVWSVNNYFQKPEYTFNCQSPVMTTFFSRFHHTLIVGGTYSGQIVVWDTRSKSTPVQRTPLSSIGHTHPVYSMSVVGSANANSLVSISTDGKLCSWSLENLSQPIETLDLNSRNNTNISTTASIAVTSLVFPESEMNSFYVGTEEGVIYQAQRHGAKAGVNERFKGHYGPITSVDFHPSRGSTDFSNLFLSSSTDWTCKLWSTNKTETPIYSF-EDYVEYVYDARWSPTAPSIFATGDGSGQLSLWDLNEETEAPIFR-IKPSSR-SLNRISWSADGKRLLAGDSAGSLYLYDSSQ-FASPQPDDWNRFGDVVNKLTSK 619          
BLAST of mRNA_F-serratus_M_contig802.19424.1 vs. uniprot
Match: UPI000B8E9CE9 (cytoplasmic dynein 1 intermediate chain-like isoform X1 n=9 Tax=Zootermopsis nevadensis TaxID=136037 RepID=UPI000B8E9CE9)

HSP 1 Score: 307 bits (786), Expect = 4.370e-92
Identity = 179/452 (39.60%), Postives = 258/452 (57.08%), Query Frame = 0
Query:  279 KDLSSDQKREILQTDHFQDFLRRSSRVLERALGEREALDVLADYAA-GEGDSTLRGDQGQRLNEAMTLHEDRWCQERALTDLQWSPHRPELVLTSYSARGHSVEAPSSSSLLTTTNTDADGLVLVWSLAMQHR-PEFQLSSQSPVLTARFHPYDPHVIIGGTYSGQVVEWDTRA-KSLPVQRTPLSATGHTYPVYNLHIGGTANSPSLLTASTDGRVSTWNPSQLNQPLQVMQLSH-DGAPVTISTMAVAEGDEQKHPKQLVVGSESGAIYTTPLHFRKSGAVEKYEGHYGLVTSVDANPSALKSLRG------LVLSSSVDWTTRLWRLGKGNAPVQTHTHGTYDYVCDAKWSPKHPALFVTANISGELGLWNLNHSMEEPFAPPVKAVDRCALTRMAWSPDGRRLCVGDSKGYARVFNVDQETALPRPDDEVKLEATLAAMTNRNTDKGI 720
            ++LS ++K+ I+ T+ FQ FL R+ RV+ERAL E  ++D+  DY   G+GD       G RL+     ++DRW + R +T L WSP  PEL++ SY    ++ ++P+          D DG+ L+W+   +   PE+    QSPVL A F  + P++I+GGTYSGQ+V WD R  K  PVQRTPLS   HT+PVY L + GT N+ +L++ STDGR+ +W+   L+QP + ++L H  G P+ ++ +A    D        +VGSE G++YT   H  K G  E YEGH G VT + A+     S++G      L L+SS DWT +LW + K N P+ +      DYV D  WSP HPALF T + +G L LW+LN   E P A  +      AL R++W+P G  + VGD  G   V++V ++ + PR DD  K   TL  + N   D+ I
Sbjct:  109 RELSEEEKQMIILTEDFQRFLDRAGRVMERALSE--SVDIYTDYTGVGDGDEAADEKSGLRLSLNRCFYDDRWSRNRCVTSLDWSPQYPELLVASYH---NNEDSPN----------DPDGVCLIWNTKFKKTTPEYIFHCQSPVLAATFARFHPNLILGGTYSGQIVLWDNRVQKRTPVQRTPLSTAAHTHPVYCLSVVGTQNAHNLISVSTDGRLCSWSLDMLSQPQETLELQHKQGKPIAVTCLAFPHSDVNN----FIVGSEEGSVYTACRHGSKVGVTETYEGHQGPVTGISAH-----SVQGGIDFSHLFLTSSFDWTVKLWSV-KENRPLYSFEDNG-DYVYDVAWSPVHPALFATVDGTGRLDLWDLNQDTEVPTATAL-VEGSPALNRVSWTPSGLHVTVGDDMGKIWVYDVGEQLSQPRLDDWSKFVYTLQELKNNKADEEI 533          
BLAST of mRNA_F-serratus_M_contig802.19424.1 vs. uniprot
Match: A0A2J7R9K8_9NEOP (Cytoplasmic dynein 1 intermediate chain n=4 Tax=Termitoidae TaxID=1912919 RepID=A0A2J7R9K8_9NEOP)

HSP 1 Score: 305 bits (780), Expect = 1.300e-91
Identity = 175/448 (39.06%), Postives = 257/448 (57.37%), Query Frame = 0
Query:  279 KDLSSDQKREILQTDHFQDFLRRSSRVLERALGEREALDVLADYAAGEGDSTLRGDQ--GQRLNEAMTLHEDRWCQERALTDLQWSPHRPELVLTSYSARGHSVEAPSSSSLLTTTNTDADGLVLVWSLAMQHR-PEFQLSSQSPVLTARFHPYDPHVIIGGTYSGQVVEWDTRA-KSLPVQRTPLSATGHTYPVYNLHIGGTANSPSLLTASTDGRVSTWNPSQLNQPLQVMQLSH-DGAPVTISTMAVAEGDEQKHPKQLVVGSESGAIYTTPLHFRKSGAVEKYEGHYGLVTSVDANP-SALKSLRGLVLSSSVDWTTRLWRLGKGNAPVQTHTHGTYDYVCDAKWSPKHPALFVTANISGELGLWNLNHSMEEPFAPPVKAVDRCALTRMAWSPDGRRLCVGDSKGYARVFNVDQETALPRPDDEVKLEATLAAMTNRNTDKGI 720
            ++LS ++K+  + T+ FQ FL R+ R++ERA+ E  ++D+  DY  G  D    GD+  G RL+     ++DRW + R LT L WSP  PEL++ SY    ++ ++P+          D DG+ L+W+   +   PE+    QSPVL A F  + P++++GGTYSGQ+V WD R  K  P+QRTPLS + HT+PVY L + GT N+ +L++ STDGR+ +W+   L+QP + ++L H  G P+ ++ +A   GD        +VGSE G++YT   H  K+G  E YEGH G VT + A+          L L+SS DWT +LW + K N P+ +      DYV D  WSP HPALF T + +G L LW+LN   E P A  +      AL R++W+P G  + VGD  G   V++V ++ + PR DD  K   TL  + N   D+ I
Sbjct:   75 RELSEEEKQMTILTEEFQRFLDRAGRLMERAVSE--SVDIYTDYT-GVADGDEAGDEKSGLRLSLNRCFYDDRWSRNRCLTSLDWSPQYPELLVASYH---NNEDSPN----------DPDGVCLIWNTKFKKTTPEYIFHCQSPVLAATFARFHPNLVLGGTYSGQIVLWDNRVQKRTPIQRTPLSTSAHTHPVYCLSVVGTQNAHNLISVSTDGRLCSWSLDMLSQPQETLELQHKQGKPIAVTCLAFPHGDVNN----FIVGSEEGSVYTACRHGSKAGVTETYEGHQGPVTGISAHSVQGAIDFSHLFLTSSFDWTVKLWSV-KENRPLYSFEDNG-DYVYDVAWSPVHPALFATVDGTGRLDLWDLNQDTEVPTASAL-VEGAPALNRVSWTPSGLHVTVGDDMGKIWVYDVGEQLSQPRIDDWSKFVYTLQELKNNQADEEI 499          
BLAST of mRNA_F-serratus_M_contig802.19424.1 vs. uniprot
Match: A0A4C1T631_EUMVA (Cytoplasmic dynein 1 intermediate chain n=1 Tax=Eumeta variegata TaxID=151549 RepID=A0A4C1T631_EUMVA)

HSP 1 Score: 299 bits (766), Expect = 2.740e-90
Identity = 174/445 (39.10%), Postives = 251/445 (56.40%), Query Frame = 0
Query:  279 KDLSSDQKREILQTDHFQDFLRRSSRVLERALGEREALDVLADYAAG-EGDSTLRGDQGQRLNEAMTLHEDRWCQERALTDLQWSPHRPELVLTSYSARGHSVEAPSSSSLLTTTNTDADGLVLVWSLAMQHR-PEFQLSSQSPVLTARFHPYDPHVIIGGTYSGQVVEWDTRA-KSLPVQRTPLSATGHTYPVYNLHIGGTANSPSLLTASTDGRVSTWNPSQLNQPLQVMQLSH-DGAPVTISTMAVAEGDEQKHPKQLVVGSESGAIYTTPLHFRKSGAVEKYEGHYGLVTSVDANPSA-LKSLRGLVLSSSVDWTTRLWRLGKGNAPVQTHTHGTYDYVCDAKWSPKHPALFVTANISGELGLWNLNHSMEEPFAPPVKAVDRCALTRMAWSPDGRRLCVGDSKGYARVFNVDQETALPRPDDEVKLEATLAAMTNRNTDK 718
            ++LS+D+K+ I+ +  FQ F+ R+ RV+ERAL E   +D+  DY  G EG+S        RL+   T  ++RW + R +T L WS   PEL+L SY    +S +AP           D DG+ LVW+   +   PE     QSPV++A F  + P++I+GGTYSGQ+V WD R  K  P+QRTPLS+  HT+PVY L++ G+ N+ +L++ STDGR+ +W+   L+QP + ++L H     V +++M    GD        V+GSE G IYT   H +++G  E  EGH G +T +  + +A    L  L L+SS+DW+ +LW L +  A       G  DYV DA+WSP HPALF   + SG L LWNLN   E P A  ++A    A  R++W+P G  +  GD  G   V+ V +  A PR D+  K   TL  + N   D+
Sbjct:   16 RELSADEKQTIIMSAEFQRFISRAGRVIERALAE--GVDIYTDYTGGAEGESAQDDKSDARLSLVRTFQDERWSRGRCVTCLDWSTAHPELMLASYH---NSDDAPH----------DPDGVCLVWNTKFKKTTPEDIFHCQSPVMSATFARFHPNLILGGTYSGQIVLWDNRVQKRTPIQRTPLSSLAHTHPVYCLNVVGSQNAHNLISVSTDGRMCSWSLDMLSQPQETLELQHRQSKAVAVTSMGFPHGDVNN----FVLGSEDGNIYTGCRHGQRAGVTECVEGHAGPITGISCHAAAGAVDLSHLFLTSSMDWSVKLWSLKENKALYSFEDSG--DYVLDARWSPVHPALFAAVDASGRLDLWNLNRDTEVPIAT-IQAEGGVAFNRVSWTPTGTHVTAGDDLGKIWVYEVAEHVASPRHDEWSKFVYTLQELRNNQADE 438          
BLAST of mRNA_F-serratus_M_contig802.19424.1 vs. uniprot
Match: A0A2J7R9J9_9NEOP (Cytoplasmic dynein 1 intermediate chain n=15 Tax=Termitoidae TaxID=1912919 RepID=A0A2J7R9J9_9NEOP)

HSP 1 Score: 305 bits (780), Expect = 9.290e-90
Identity = 175/448 (39.06%), Postives = 257/448 (57.37%), Query Frame = 0
Query:  279 KDLSSDQKREILQTDHFQDFLRRSSRVLERALGEREALDVLADYAAGEGDSTLRGDQ--GQRLNEAMTLHEDRWCQERALTDLQWSPHRPELVLTSYSARGHSVEAPSSSSLLTTTNTDADGLVLVWSLAMQHR-PEFQLSSQSPVLTARFHPYDPHVIIGGTYSGQVVEWDTRA-KSLPVQRTPLSATGHTYPVYNLHIGGTANSPSLLTASTDGRVSTWNPSQLNQPLQVMQLSH-DGAPVTISTMAVAEGDEQKHPKQLVVGSESGAIYTTPLHFRKSGAVEKYEGHYGLVTSVDANP-SALKSLRGLVLSSSVDWTTRLWRLGKGNAPVQTHTHGTYDYVCDAKWSPKHPALFVTANISGELGLWNLNHSMEEPFAPPVKAVDRCALTRMAWSPDGRRLCVGDSKGYARVFNVDQETALPRPDDEVKLEATLAAMTNRNTDKGI 720
            ++LS ++K+  + T+ FQ FL R+ R++ERA+ E  ++D+  DY  G  D    GD+  G RL+     ++DRW + R LT L WSP  PEL++ SY    ++ ++P+          D DG+ L+W+   +   PE+    QSPVL A F  + P++++GGTYSGQ+V WD R  K  P+QRTPLS + HT+PVY L + GT N+ +L++ STDGR+ +W+   L+QP + ++L H  G P+ ++ +A   GD        +VGSE G++YT   H  K+G  E YEGH G VT + A+          L L+SS DWT +LW + K N P+ +      DYV D  WSP HPALF T + +G L LW+LN   E P A  +      AL R++W+P G  + VGD  G   V++V ++ + PR DD  K   TL  + N   D+ I
Sbjct:  241 RELSEEEKQMTILTEEFQRFLDRAGRLMERAVSE--SVDIYTDYT-GVADGDEAGDEKSGLRLSLNRCFYDDRWSRNRCLTSLDWSPQYPELLVASYH---NNEDSPN----------DPDGVCLIWNTKFKKTTPEYIFHCQSPVLAATFARFHPNLVLGGTYSGQIVLWDNRVQKRTPIQRTPLSTSAHTHPVYCLSVVGTQNAHNLISVSTDGRLCSWSLDMLSQPQETLELQHKQGKPIAVTCLAFPHGDVNN----FIVGSEEGSVYTACRHGSKAGVTETYEGHQGPVTGISAHSVQGAIDFSHLFLTSSFDWTVKLWSV-KENRPLYSFEDNG-DYVYDVAWSPVHPALFATVDGTGRLDLWDLNQDTEVPTASAL-VEGAPALNRVSWTPSGLHVTVGDDMGKIWVYDVGEQLSQPRIDDWSKFVYTLQELKNNQADEEI 665          
BLAST of mRNA_F-serratus_M_contig802.19424.1 vs. uniprot
Match: A0A0G4H2R6_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4H2R6_VITBC)

HSP 1 Score: 303 bits (776), Expect = 2.310e-89
Identity = 172/436 (39.45%), Postives = 250/436 (57.34%), Query Frame = 0
Query:  280 DLSSDQKREILQTDHFQDFLRRSSRVLERALGEREALDVLADYA--AGEGDSTLRGDQGQRLNEAMTLHEDRWCQERALTDLQWSPHRPELVLTSYSARGHSVEAPSSSSLLTTTNTDADGLVLVWSLAMQHRPEFQLSSQSPVLTARFHPYDPHVIIGGTYSGQVVEWDTRAKSLPVQRTPLSATGHTYPVYNLHIGGTANSPSLLTASTDGRVSTWNPSQLNQPLQVMQLSHDGAPVTISTMAVAEGDEQKHPKQLVVGSESGAIYTTPLHFRKSGAVEKYEGHYGLVTSVDANPSALKSLRG-----LVLSSSVDWTTRLWRLGKGNAPVQTHTHGTYDYVCDAKWSPKHPALFVTANISGELGLWNLNHSMEEPFAPPVKAVDRCALTRMAWSPDGRRLCVGDSKGYARVFNVDQETALPRPDDEVKLEATL 708
            +L  + +++IL +  F DF  ++SR++ERALG +   D+L DY+  A E  + + G +  + +E  T  +D+W Q R +T +  SP  PEL + SY  R ++  AP          TD DG VLVWSL M  RPE+  + QS VLTA F  + PH++IGGTYSG +V WDTRAK+ P+ RTPLS+ GH +PVY++ + GT N+ +L++ STDGR+  W+   L  P + +        V+++ MA  EG+       L+ G+E G+I    +H  K G  E +EGH G +T VD +P    +  G     L+LS+S DWT RLW   K ++        + DYV DAKW P HPA+F + +  G L +W+LN  +E P           A+  + WSPDGRRL  G S+G   V+NVD+E   P+P+D  +LE  +
Sbjct:  220 ELPDEDRQKILTSTDFADFFNKTSRLVERALGAQ--FDILVDYSGVAAEEGNDMEGVEKVKRHE--TYRDDKWTQGRCVTSVCNSPKFPELFMASYGQRENA--AP----------TDPDGCVLVWSLPMTQRPEYVFTCQSAVLTACFDKFQPHLVIGGTYSGSIVLWDTRAKAGPIHRTPLSSRGHAHPVYSMALVGTQNAHNLISVSTDGRLCVWSLGMLVHPQEFIDFKKGNRDVSVTCMAFEEGETNV----LMAGAEDGSIVQAHIHGTKVGVTEAFEGHDGPITGVDYHPIGEAASHGADFSDLLLSTSFDWTIRLWS-PKHHSQCLHSFEVSEDYVYDAKWHPHHPAVFASVDGEGNLDVWDLNKDLESPHVRVNSG--ESAMNHLCWSPDGRRLVSGTSEGIIAVWNVDKELTTPKPEDWARLEEQI 632          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig802.19424.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FML5_ECTSI0.000e+068.33Putative: similar to cytoplasmic dynein intermedia... [more]
A0A836C896_9STRA9.790e-12947.24WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
D3AZM5_POLPP2.070e-9740.61Cytoplasmic dynein intermediate chain n=1 Tax=Poly... [more]
F4PS77_CAVFA6.710e-9641.36Cytoplasmic dynein intermediate chain n=1 Tax=Cave... [more]
UPI00064492575.940e-9339.46hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
UPI000B8E9CE94.370e-9239.60cytoplasmic dynein 1 intermediate chain-like isofo... [more]
A0A2J7R9K8_9NEOP1.300e-9139.06Cytoplasmic dynein 1 intermediate chain n=4 Tax=Te... [more]
A0A4C1T631_EUMVA2.740e-9039.10Cytoplasmic dynein 1 intermediate chain n=1 Tax=Eu... [more]
A0A2J7R9J9_9NEOP9.290e-9039.06Cytoplasmic dynein 1 intermediate chain n=15 Tax=T... [more]
A0A0G4H2R6_VITBC2.310e-8939.45Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1..42
NoneNo IPR availablePANTHERPTHR12442DYNEIN INTERMEDIATE CHAINcoord: 8..715
NoneNo IPR availablePANTHERPTHR12442:SF22CYTOPLASMIC DYNEIN 1 INTERMEDIATE CHAIN-RELATEDcoord: 8..715
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 601..642
e-value: 0.97
score: 17.1
coord: 651..688
e-value: 4.1
score: 13.1
coord: 408..447
e-value: 0.95
score: 17.2
coord: 553..597
e-value: 5.3
score: 12.5
coord: 455..496
e-value: 5.2
score: 12.5
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 271..526
e-value: 6.8E-17
score: 63.3
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 530..718
e-value: 7.1E-18
score: 66.6
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 397..697
score: 14.081
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 355..691

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig802contigF-serratus_M_contig802:212701..239672 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig802.19424.1mRNA_F-serratus_M_contig802.19424.1Fucus serratus malemRNAF-serratus_M_contig802 212634..240306 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig802.19424.1 ID=prot_F-serratus_M_contig802.19424.1|Name=mRNA_F-serratus_M_contig802.19424.1|organism=Fucus serratus male|type=polypeptide|length=724bp
MADAEAVRKQRQKQLDDKRRRLDELRQRKKAKEIAAKVASDTAPVPPPTD
DFDPDKSWYSAADDTNASKGGADLDAYIKSLLETPAVGGASAAAGAGAGA
GSGPANESFSTSRSDGRIAERLSSLTITTGLAVVNVMPKSVEFYDKACQA
DLGGATEDVDVETSNGINGINRSTLTPSAKKTPDKRRNHLRVFGRGGKGV
PVFGHDTNSSDAEDLGHSSGGGPSLVAAASPLRSGGSRPMVSTPVGKAGR
WPDGGGLLPFPMTPPPQQLSSAANKDKGKDLSSDQKREILQTDHFQDFLR
RSSRVLERALGEREALDVLADYAAGEGDSTLRGDQGQRLNEAMTLHEDRW
CQERALTDLQWSPHRPELVLTSYSARGHSVEAPSSSSLLTTTNTDADGLV
LVWSLAMQHRPEFQLSSQSPVLTARFHPYDPHVIIGGTYSGQVVEWDTRA
KSLPVQRTPLSATGHTYPVYNLHIGGTANSPSLLTASTDGRVSTWNPSQL
NQPLQVMQLSHDGAPVTISTMAVAEGDEQKHPKQLVVGSESGAIYTTPLH
FRKSGAVEKYEGHYGLVTSVDANPSALKSLRGLVLSSSVDWTTRLWRLGK
GNAPVQTHTHGTYDYVCDAKWSPKHPALFVTANISGELGLWNLNHSMEEP
FAPPVKAVDRCALTRMAWSPDGRRLCVGDSKGYARVFNVDQETALPRPDD
EVKLEATLAAMTNRNTDKGIAVT*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf