mRNA_F-serratus_M_contig80.19396.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig80.19396.1 vs. uniprot
Match: D7FWH7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWH7_ECTSI) HSP 1 Score: 413 bits (1061), Expect = 1.800e-139 Identity = 201/232 (86.64%), Postives = 219/232 (94.40%), Query Frame = 1
Query: 139 ATAPKPSHETVKTRKKGISVACPIAYGSLAFLLERKKQSEYITHKWTLFVRGPNGEDISYFVSKVVFTLHPSFAEATREIKSPPFEVTEMGWGEFEAKMTMHFKDPSERPVDILHQLRLYHDAAAGTTQPKKAVVSEFYDEVVFTDPYEEFYDTLMQGQKLMPQRKHEHQEHFSTFSDGDTLQRLASAREWVHNQLRETKDKIRKADMEIAQLKANALASSGRGHGRPAPSQ 834
A+A KP + K RKKG+SVACPIAYGSLAFLLERKKQSE++THKWTLFVRGPNGEDISYFVSKVVFTLHPSFAEATREI SPPFEVTEMGWGEFEAKMTMHFKDP+E+PVD+LHQLRLYHD A GTTQPKKAVV+EFYDEVVFTDPYEEFY+TLMQGQKL+PQRKHEHQEHFSTFSDGDTLQRLA+AREWVHNQLRETKD+IRKADM++AQLKA+A ASSGRG GR + +Q
Sbjct: 2 ASASKPPADVPKIRKKGLSVACPIAYGSLAFLLERKKQSEFVTHKWTLFVRGPNGEDISYFVSKVVFTLHPSFAEATREITSPPFEVTEMGWGEFEAKMTMHFKDPNEKPVDVLHQLRLYHDPATGTTQPKKAVVAEFYDEVVFTDPYEEFYNTLMQGQKLLPQRKHEHQEHFSTFSDGDTLQRLAAAREWVHNQLRETKDRIRKADMDMAQLKASATASSGRGLGRGSTAQ 233
BLAST of mRNA_F-serratus_M_contig80.19396.1 vs. uniprot
Match: A0A835ZJW2_9STRA (Yeats family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJW2_9STRA) HSP 1 Score: 209 bits (531), Expect = 1.300e-59 Identity = 106/204 (51.96%), Postives = 141/204 (69.12%), Query Frame = 1
Query: 178 RKKGISVACPIAYGSLAFLLERKKQSEYITHKWTLFVRGPNGEDISYFVSKVVFTLHPSFAEATREIKSPPFEVTEMGWGEFEAKMTMHFKDPSERPVDILHQLRLYHDAAAGTTQPKKAVVSEFYDEVVFTDPYEEFYDTLMQGQKLMPQRKHEHQEHFSTFSDGDTLQRLASAREWVHNQLRETKDKIRKADMEIAQLKANA 789
R G++V CP+ +G +AFLL K E TH WTL+VRG +GEDISYFVSKVVFTLH SF TRE+ P+EVTE GWGEFEAK+T+HFKDP+ERP+D+ H ++LY DA P VV+E YDE+VFTDP E F+ LM+GQ R+H +++ FS + +Q+LA+ARE+VH +L KD+I + D +I A++
Sbjct: 11 RMSGVTVCCPVVFGCVAFLLG-KDGDELHTHCWTLYVRGAHGEDISYFVSKVVFTLHASFEPPTRELTEWPYEVTEKGWGEFEAKITLHFKDPAERPIDVPHPVKLYADAGMPAPGPGVPVVTERYDEIVFTDPKEGFFACLMEGQTAAV-REHPQLQYYKDFSAEEDVQKLAAAREYVHGELEAVKDRILRLDAQIKDTPASS 212
BLAST of mRNA_F-serratus_M_contig80.19396.1 vs. uniprot
Match: A0A7S3ZZU1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZZU1_9STRA) HSP 1 Score: 200 bits (508), Expect = 2.030e-56 Identity = 109/200 (54.50%), Postives = 132/200 (66.00%), Query Frame = 1
Query: 178 RKKGISVACPIAYGSLAFLLERKKQSEYITHKWTLFVRGPNGEDISYFVSKVVFTLHPSFAEATREIKSPPFEVTEMGWGEFEAKMTMHFKDPSERPVDILHQLRLYHDAAAGTTQPKKA---VVSEFYDEVVFTDPYEEFYDTLMQGQKLMPQRKHEHQEHFSTFSDGDTLQRLASAREWVHNQLRETKDKIRKADMEI 768
R K +V CP+ YGSLAF L RK E+ THKWTLFVRGP+GED+ YFV KVVF LHPSFA+ RE+ PPFEV+E GWGEFE + +HFKDP+E+PV++ H ++LY GTT P+ A VVSE YDEVVFTDP E FY LM K P H HFS F D ++ L A E+V QL+ KD I + D +I
Sbjct: 36 RVKDAAVCCPLVYGSLAFWLGRKAD-EFHTHKWTLFVRGPHGEDLGYFVEKVVFKLHPSFAQPVREVTKPPFEVSEKGWGEFECHIRIHFKDPTEKPVEVSHIVKLYD----GTT-PQAANQPVVSEVYDEVVFTDPREPFYQQLMAASKE-PTEPHPLNGHFSKFEDAAEVETLVKAGEYVAGQLQTVKDSIARLDHQI 228
BLAST of mRNA_F-serratus_M_contig80.19396.1 vs. uniprot
Match: A0A5D6XVR5_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XVR5_9STRA) HSP 1 Score: 186 bits (472), Expect = 1.090e-51 Identity = 102/204 (50.00%), Postives = 134/204 (65.69%), Query Frame = 1
Query: 178 RKKGISVACPIAYGSLAFLLERKKQSEYITHKWTLFVRGPNGEDISYFVSKVVFTLHPSFAEATREIKSPPFEVTEMGWGEFEAKMTMHFKDPSERPVDILHQLRLYHDAAAGTTQPKKAVVSEFYDEVVFTDPYEEFYDTLMQGQKLMPQRK---HEHQEHFSTFSDGDTLQRLASAREWVHNQLRETKDKIRKADMEIAQLK 780
R+K + V+ PI YGS A L RK + E TH+W+++VRG N ED+SY +SKVV TLH SFA R + PP+EVTE GWGEFE ++ +HF D E+PVDI+H L LY + KK V+SEFYDE+VF +P E FY LM G P R+ H QEHF T+SD L+ LA A+E+V ++ ETKD + AD+E+ +LK
Sbjct: 5 RQKHVVVSKPIVYGSAATYLGRKAE-ETKTHRWSIYVRGVNNEDLSYMISKVVITLHMSFANPVRVLTEPPYEVTEFGWGEFETRIQIHFHDAHEKPVDIIHMLVLYPPGNQPAST-KKPVISEFYDELVFNEPTEFFYKKLMAG----PDRQAPPHALQEHFPTYSDVAVLKALAQAQEFVSREIHETKDLLLHADIELKELK 202
BLAST of mRNA_F-serratus_M_contig80.19396.1 vs. uniprot
Match: A0A7R9Y9J6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y9J6_9STRA) HSP 1 Score: 185 bits (469), Expect = 3.470e-51 Identity = 98/206 (47.57%), Postives = 136/206 (66.02%), Query Frame = 1
Query: 178 RKKGISVACPIAYGSLAFLLERKKQSEYITHKWTLFVRGPNGEDISYFVSKVVFTLHPSFAEATREIKSPPFEVTEMGWGEFEAKMTMHFKDPSERPVDILHQLRLYHDAAAGTTQPKKAVVSEFYDEVVFTDPYEEFYDTLMQGQKLMPQRKHEHQEHFSTFSDGDTLQRLASAREWVHNQLRETKDKIRKADMEIAQLKANALA 795
R+K V CPI YGS+AF + KK E+ TH+WTL+VRGPN ED+ YF+ KVVF LH SFA RE+++PPFEVTE GWGEFEAK+ ++F+D SER V++ H + LY + + KK VVSE YDEVVFT+P E+FY+ ++Q Q + H QEHF ++D +++L +ARE + + K +I + D E+ K+ A
Sbjct: 12 RRKNTLVCCPIVYGSIAFWMG-KKADEHSTHQWTLYVRGPNDEDLGYFIDKVVFVLHHSFANPERELRAPPFEVTEKGWGEFEAKIRLYFRDASERMVEVAHTIALYPPNNSQLSV-KKPVVSEKYDEVVFTEPAEDFYEHVLQRQ-YDTRPAHPLQEHFLAYTDMHDVEKLTAAREILKQESESLKAQIVRMDGELESCKSTIAA 214
BLAST of mRNA_F-serratus_M_contig80.19396.1 vs. uniprot
Match: A0A2D4BFL2_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BFL2_PYTIN) HSP 1 Score: 184 bits (466), Expect = 8.890e-51 Identity = 98/204 (48.04%), Postives = 136/204 (66.67%), Query Frame = 1
Query: 178 RKKGISVACPIAYGSLAFLLERKKQSEYITHKWTLFVRGPNGEDISYFVSKVVFTLHPSFAEATREIKSPPFEVTEMGWGEFEAKMTMHFKDPSERPVDILHQLRLYHDAAAGTTQPKKAVVSEFYDEVVFTDPYEEFYDTLMQGQKLMPQRK---HEHQEHFSTFSDGDTLQRLASAREWVHNQLRETKDKIRKADMEIAQLK 780
R++ + +A PI YGS+A L RK + E TH+W++++RG + ED+SY VSKVV TLH SFA R + PP+EVTE GWGEFE ++ +HF DPSE+PVDI+H L LY + KK VVSEFYDE+VF +P E Y LM G P+R+ H QEHF +SD L+ LA A V +++ +TK+K+ +A++E+ +LK
Sbjct: 5 RQRNVVIAKPIVYGSIATYLGRKAE-ETKTHRWSIYLRGADNEDLSYIVSKVVITLHASFANPVRVLTEPPYEVTEYGWGEFETRIQIHFHDPSEKPVDIIHMLVLYPPGNQPAST-KKPVVSEFYDELVFNEPTEFLYKKLMAG----PEREAPPHPMQEHFPVYSDAAILKTLAQANSLVSDEIDDTKNKLLQAELELKELK 202
BLAST of mRNA_F-serratus_M_contig80.19396.1 vs. uniprot
Match: A0A8K1CG01_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CG01_PYTOL) HSP 1 Score: 182 bits (462), Expect = 2.910e-50 Identity = 96/202 (47.52%), Postives = 135/202 (66.83%), Query Frame = 1
Query: 178 RKKGISVACPIAYGSLAFLLERKKQSEYITHKWTLFVRGPNGEDISYFVSKVVFTLHPSFAEATREIKSPPFEVTEMGWGEFEAKMTMHFKDPSERPVDILHQLRLYHDAAAGTTQPKKAVVSEFYDEVVFTDPYEEFYDTLMQG-QKLMPQRKHEHQEHFSTFSDGDTLQRLASAREWVHNQLRETKDKIRKADMEIAQLK 780
R+K + +A PI YGS+A L RK + E TH+W++++RG ED+SY +SKVV TLH SFA R + PP+EVTE GWGEFE ++ +HF DP+E+PVDI+H L LY + KK V+SEFYDE+VF +P E FY LM G +K P + QEHF +SD L+ L+ A+++ ++++ TKD + AD+EI +LK
Sbjct: 5 RQKNVVIAKPIVYGSIATYLGRKSE-ETKTHRWSIYLRGAENEDLSYMLSKVVITLHASFANPVRVLTEPPYEVTEFGWGEFETRIQLHFHDPNEKPVDIIHMLVLYPPGNLPAST-KKPVISEFYDELVFNEPTEFFYKKLMAGPEKEAP--AYSMQEHFPVYSDVAILKTLSQAQQFTKDEIQATKDLLLHADLEIKELK 202
BLAST of mRNA_F-serratus_M_contig80.19396.1 vs. uniprot
Match: A0A7S1Z287_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z287_9STRA) HSP 1 Score: 183 bits (465), Expect = 5.740e-50 Identity = 102/214 (47.66%), Postives = 139/214 (64.95%), Query Frame = 1
Query: 193 SVACPIAYGSLAFLLERKKQSEYITHKWTLFVRGPNGEDISYFVSKVVFTLHPSFAEATREIKSPPFEVTEMGWGEFEAKMTMHFKDPSERPVDILHQLRLYHDAAAG---TTQPKKAVVSEFYDEVVFTDPYEEFYDTLMQGQKLMPQRKHEH--QEHFSTFSDGDTLQRLASAREWVHNQLRETKDKIRKADM------EIAQLKANALASS 801
+V PI YGS+AF L KK EY TH+WTL+VR PNGED+S +SKVVF LHPSF + RE+ +PPFEVTE GWGEFEA + + ++DP E+ + H ++LY T K+ VV EFYDEVVFTDP E F+ LM+ L + HE QE+F T++D + + L +A++++ ++LR+ KD+I KADM E ++ A A ASS
Sbjct: 33 TVCVPIVYGSIAFFLG-KKADEYHTHRWTLYVRSPNGEDLSTGISKVVFQLHPSFPQPVRELTAPPFEVTEKGWGEFEATIRIVWRDPGEKATVLTHGIKLYPPGLTQITPATTSKEPVVHEFYDEVVFTDPTEAFHRQLMRSSVLPRIQSHEPTVQENFPTYADEEDFKALLAAQKFLEDELRDVKDRIMKADMAREEIEEALRVAATAKASS 245
BLAST of mRNA_F-serratus_M_contig80.19396.1 vs. uniprot
Match: F0Y5R3_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5R3_AURAN) HSP 1 Score: 176 bits (446), Expect = 3.510e-49 Identity = 87/137 (63.50%), Postives = 102/137 (74.45%), Query Frame = 1
Query: 178 RKKGISVACPIAYGSLAFLLERKKQSEYITHKWTLFVRGPNGEDISYFVSKVVFTLHPSFAEATREIKSPPFEVTEMGWGEFEAKMTMHFKDPSERPVDILHQLRLYHDAAAGT-TQPKKAVVSEFYDEVVFTDPYE 585
RKK +V CP+ YGS+AF L RK EY THKWTLFVRGP+GED+ YFV KVVF LHPSFA+ REI PP+EVTE GWGEFEA + +HF+DPSERPV+ H ++LY TQP VVSE YDEVVFT+P+E
Sbjct: 1 RKKNTAVCCPLVYGSVAFWLGRKAD-EYHTHKWTLFVRGPHGEDLGYFVEKVVFKLHPSFAQPVREIHEPPYEVTEKGWGEFEASVRVHFRDPSERPVEFSHVVKLYDGTTPQVATQP---VVSEVYDEVVFTEPHE 133
BLAST of mRNA_F-serratus_M_contig80.19396.1 vs. uniprot
Match: A0A3F2RH13_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RH13_9STRA) HSP 1 Score: 178 bits (452), Expect = 1.070e-48 Identity = 98/207 (47.34%), Postives = 140/207 (67.63%), Query Frame = 1
Query: 178 RKKGISVACPIAYGSLAFLLERKKQSEYITHKWTLFVRGPNGEDISYFVSKVVFTLHPSFAEATREIKSPPFEVTEMGWGEFEAKMTMHFKDPSERPVDILHQLRLY--HDAAAGTTQ-PKKAVVSEFYDEVVFTDPYEEFYDTLMQGQKLMPQRKHEH---QEHFSTFSDGDTLQRLASAREWVHNQLRETKDKIRKADMEIAQLK 780
R+K + V+ PI YGS+A L RK + E TH+W++++RG + ED+SY +SKVV +LH SFA R + PP+EVTE+GWGEFE ++ ++F DP+ERP+ I+H L LY + A T + P K VVSEFYDE+VF +P E FY LM G P R+ QEH ST+SD + L+ LA A+ +V ++++TK+ + AD+EI +LK
Sbjct: 5 RQKNVVVSKPILYGSVATYLGRKAE-ETKTHRWSIYLRGVDNEDLSYMISKVVISLHVSFANPVRVLTEPPYEVTELGWGEFETRIQIYFHDPNERPISIIHLLVLYPPNSQPASTKKVPSKPVVSEFYDELVFNEPTEFFYKKLMAG----PDRQSPPLAMQEHLSTYSDVEVLKTLAHAQTFVTKEIQDTKNLLLDADLEIKELK 206 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig80.19396.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig80.19396.1 >prot_F-serratus_M_contig80.19396.1 ID=prot_F-serratus_M_contig80.19396.1|Name=mRNA_F-serratus_M_contig80.19396.1|organism=Fucus serratus male|type=polypeptide|length=147bp MGWGEFEAKMTMHFKDPSERPVDILHQLRLYHDAAAGTTQPKKAVVSEFYback to top mRNA from alignment at F-serratus_M_contig80:806744..810967- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig80.19396.1 ID=mRNA_F-serratus_M_contig80.19396.1|Name=mRNA_F-serratus_M_contig80.19396.1|organism=Fucus serratus male|type=mRNA|length=4224bp|location=Sequence derived from alignment at F-serratus_M_contig80:806744..810967- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig80:806744..810967- >mRNA_F-serratus_M_contig80.19396.1 ID=mRNA_F-serratus_M_contig80.19396.1|Name=mRNA_F-serratus_M_contig80.19396.1|organism=Fucus serratus male|type=CDS|length=882bp|location=Sequence derived from alignment at F-serratus_M_contig80:806744..810967- (Fucus serratus male)back to top |