mRNA_F-serratus_M_contig80.19387.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig80.19387.1 vs. uniprot
Match: D7FWJ1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWJ1_ECTSI) HSP 1 Score: 229 bits (583), Expect = 6.690e-65 Identity = 270/470 (57.45%), Postives = 311/470 (66.17%), Query Frame = 1
Query: 145 MAQAVGYSGSEDRMLDSEQEAEIDGVDPWKAAMQGDLDALLQYIDDNGDVNQRDRDNNTPLHWACQESHFDIVGVLMSRNAAVDPVNDLQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNKKGRKPGDVFSPQVEEESKERIKMMLDMGVPHANRDPE----PPNGSMPPGVSPTGSRGGREEPETRGPAAEPPPYKVGRSSTASRRLLALGVGITSPKRPSTFFSLCPHFLSPPLPCPSFPLNLPTSGSYYPDPSPANSPSSIQ-DTLATPLADPLSNKTKQNDLPPGGHPVNGVRGPGD----------------------RDEELPSAGVRSTLA-QTTPSIN--GAAEMHRLKSELVAKNEELQRMSLKIDEYKKNLQKAKDESTEELDNADLQMQELNQ 1464
MAQAV YS SE+++LDSEQE E+DGVDPWKAAMQGDLDALLQYIDDNGDVNQRDRDNNTPLHWACQESHFDIVGVLMSRN+AVDPVNDLQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RNKKGRKPGDVFSP VE++ KERIK+ML MG A+ P P SS + G T+ P + P + P P PS +L S YPDPSPANSPSS ++ AT +++ + + GG +G G+ A RS QTTP ++ G+AEM+R+K+EL AKN++LQ+M LK++EYK NL +A+ ST ELD+AD+Q+++LNQ
Sbjct: 1 MAQAVAYSASEEKILDSEQEPEMDGVDPWKAAMQGDLDALLQYIDDNGDVNQRDRDNNTPLHWACQESHFDIVGVLMSRNSAVDPVNDLQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRLARNKKGRKPGDVFSPTVEDDKKERIKIMLGMGTADASAQPAAASTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSYKGNGDVPGSTGSTAGVPPPAYK---PPMSARPDPAPSA-ASLADSSYQYPDPSPANSPSSAMLNSTATVMSEAVLSTAVGEGGRGGG--TSGATSMGNGGGLTXXXXXXXXXPKQVXXXXXXXXXXXATSRSAAGVQTTPRVDAKGSAEMNRIKAELSAKNQQLQQMQLKVEEYKDNLHQAQTTSTRELDDADVQVEQLNQ 464
BLAST of mRNA_F-serratus_M_contig80.19387.1 vs. uniprot
Match: A0A835Z0Q5_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0Q5_9STRA) HSP 1 Score: 117 bits (292), Expect = 1.110e-24 Identity = 54/65 (83.08%), Postives = 57/65 (87.69%), Query Frame = 1
Query: 220 VDPWKAAMQGDLDALLQYIDDNGDVNQRDRDNNTPLHWACQESHFDIVGVLMSRNAAVDPVNDLQ 414
VDPWKAA GDLDA+L YID+ GDVN RD +NNTPLHWACQESHFDIVGVLMSR A VDPVNDLQ
Sbjct: 4 VDPWKAATSGDLDAILTYIDEGGDVNCRDVNNNTPLHWACQESHFDIVGVLMSRGAHVDPVNDLQ 68
BLAST of mRNA_F-serratus_M_contig80.19387.1 vs. uniprot
Match: A0A836C8I0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8I0_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 1.060e-20 Identity = 43/54 (79.63%), Postives = 48/54 (88.89%), Query Frame = 1
Query: 217 GVDPWKAAMQGDLDALLQYIDDNGDVNQRDRDNNTPLHWACQESHFDIVGVLMS 378
G+DPWKAA GDLDA+L +ID+ GDVN RD +NNTPLHWACQESHFDIVGVLMS
Sbjct: 7 GIDPWKAATAGDLDAILTFIDEGGDVNCRDANNNTPLHWACQESHFDIVGVLMS 60
BLAST of mRNA_F-serratus_M_contig80.19387.1 vs. uniprot
Match: Q4L0H4_AGAAM (Membrane acyl-CoA binding protein n=1 Tax=Agave americana TaxID=39510 RepID=Q4L0H4_AGAAM) HSP 1 Score: 58.5 bits (140), Expect = 1.410e-5 Identity = 26/66 (39.39%), Postives = 43/66 (65.15%), Query Frame = 1
Query: 190 DSEQEAEIDGVDPWKAAMQGDLDALLQYIDDNGDVNQRDRDNNTPLHWACQESHFDIVGVLMSRNA 387
+S+ + ++D + A +G+ D LL++I++ VN RD + TPLHWA HF++V +L+SRNA
Sbjct: 220 ESDNDLKLDAI--HACAREGEADNLLRHIENGVPVNSRDSEGRTPLHWAVDRGHFNVVEILLSRNA 283
BLAST of mRNA_F-serratus_M_contig80.19387.1 vs. uniprot
Match: A0A1U8AW91_NELNU (acyl-CoA-binding domain-containing protein 1 n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U8AW91_NELNU) HSP 1 Score: 58.5 bits (140), Expect = 1.430e-5 Identity = 28/66 (42.42%), Postives = 45/66 (68.18%), Query Frame = 1
Query: 190 DSEQEAEIDGVDPWKAAMQGDLDALLQYIDDNGDVNQRDRDNNTPLHWACQESHFDIVGVLMSRNA 387
+SE+E ++D + +A +G++D LL+Y+D+ V+ RD + TPLHWA H +IV +L+SRNA
Sbjct: 239 ESEKELKMDAI--HASAREGEMDNLLKYMDNGVPVDLRDGEGRTPLHWAVDRGHLNIVELLVSRNA 302
BLAST of mRNA_F-serratus_M_contig80.19387.1 vs. uniprot
Match: A0A7J6WHB3_THATH (Acyl-coa-binding domain-containing protein n=1 Tax=Thalictrum thalictroides TaxID=46969 RepID=A0A7J6WHB3_THATH) HSP 1 Score: 57.0 bits (136), Expect = 4.210e-5 Identity = 27/66 (40.91%), Postives = 42/66 (63.64%), Query Frame = 1
Query: 190 DSEQEAEIDGVDPWKAAMQGDLDALLQYIDDNGDVNQRDRDNNTPLHWACQESHFDIVGVLMSRNA 387
DS EA+++ + + A +G++D L +YI D VN +D + TPLHWA H +IV +L+S+NA
Sbjct: 224 DSHSEAKLEAI--HECAREGEIDNLHKYIGDGESVNLKDSEGRTPLHWAVDRGHSNIVELLLSKNA 287
BLAST of mRNA_F-serratus_M_contig80.19387.1 vs. uniprot
Match: A0A2G5DZE2_AQUCA (ACB domain-containing protein n=1 Tax=Aquilegia coerulea TaxID=218851 RepID=A0A2G5DZE2_AQUCA) HSP 1 Score: 56.2 bits (134), Expect = 6.550e-5 Identity = 27/69 (39.13%), Postives = 43/69 (62.32%), Query Frame = 1
Query: 190 DSEQEAEIDGVDPWKAAMQGDLDALLQYIDDNGDVNQRDRDNNTPLHWACQESHFDIVGVLMSRNAAVD 396
DS E +++ + + A +G++D L ++I D VN +D + TPLHWA H DIV +L+S+NA V+
Sbjct: 248 DSHSETKLEAIHEF--AREGEIDNLHKHIGDGESVNLKDSEGRTPLHWAVDRGHSDIVELLLSKNADVN 314
BLAST of mRNA_F-serratus_M_contig80.19387.1 vs. uniprot
Match: A0A1D1YME2_9ARAE (Acyl-CoA-binding domain-containing protein 2 n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1YME2_9ARAE) HSP 1 Score: 55.8 bits (133), Expect = 9.910e-5 Identity = 27/66 (40.91%), Postives = 42/66 (63.64%), Query Frame = 1
Query: 190 DSEQEAEIDGVDPWKAAMQGDLDALLQYIDDNGDVNQRDRDNNTPLHWACQESHFDIVGVLMSRNA 387
+S +E ++D + + A +G+ DALL +D+ VN RD + TPLHWA HF+IV +L+S+ A
Sbjct: 234 ESNKELKLDAIHVF--AREGEADALLAQLDNAVSVNLRDSEGRTPLHWAVDRGHFNIVEILISKGA 297 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig80.19387.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig80.19387.1 >prot_F-serratus_M_contig80.19387.1 ID=prot_F-serratus_M_contig80.19387.1|Name=mRNA_F-serratus_M_contig80.19387.1|organism=Fucus serratus male|type=polypeptide|length=497bp MAQAVGYSGSEDRMLDSEQEAEIDGVDPWKAAMQGDLDALLQYIDDNGDVback to top mRNA from alignment at F-serratus_M_contig80:554794..569655- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig80.19387.1 ID=mRNA_F-serratus_M_contig80.19387.1|Name=mRNA_F-serratus_M_contig80.19387.1|organism=Fucus serratus male|type=mRNA|length=14862bp|location=Sequence derived from alignment at F-serratus_M_contig80:554794..569655- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig80:554794..569655- >mRNA_F-serratus_M_contig80.19387.1 ID=mRNA_F-serratus_M_contig80.19387.1|Name=mRNA_F-serratus_M_contig80.19387.1|organism=Fucus serratus male|type=CDS|length=2982bp|location=Sequence derived from alignment at F-serratus_M_contig80:554794..569655- (Fucus serratus male)back to top |