mRNA_F-serratus_M_contig80.19386.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig80.19386.1 vs. uniprot
Match: A0A6H5JGY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGY9_9PHAE) HSP 1 Score: 228 bits (581), Expect = 1.080e-70 Identity = 116/188 (61.70%), Postives = 142/188 (75.53%), Query Frame = 1
Query: 190 NFDGKIGIFPFT---------RHRAAGTMETRMVEVTKAVYKEKMLNDVFPAIKRMWPGG-DRNVLVQQDNAPAHKIADDPDIVAAGTSDGWNIRLLNQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDALIAEVKRVFDAQEPETLAKVWMTYQAVLEQIMLAKGDNTFKLPHLQKATHSRRGASI 723
NF GK+GIF FT R+RAAGTMET+ VEVTK V+K K++++VFPAIK WPGG R + +Q DN P+H+I DPD+VAAG +DGW+IRL+NQP NSPDTNILDLGFFN++QSLQDR T TVD I EVKR F+ Q P T KVW++ QA+L QI+LAKG+NTFKLPHL+K + G SI
Sbjct: 87 NFTGKLGIFQFTVQRAAQRNSRNRAAGTMETKCVEVTKEVFKRKVVDEVFPAIKARWPGGRGRTIYIQLDNKPSHRINADPDVVAAGIADGWDIRLINQPSNSPDTNILDLGFFNAVQSLQDRNTPRTVDEFITEVKRAFEEQSPSTHDKVWVSLQAIL-QIILAKGNNTFKLPHLKKDNAANSGRSI 273
BLAST of mRNA_F-serratus_M_contig80.19386.1 vs. uniprot
Match: UPI001C264D25 (uncharacterized protein LOC121774216 n=2 Tax=Salvia splendens TaxID=180675 RepID=UPI001C264D25) HSP 1 Score: 221 bits (564), Expect = 5.290e-67 Identity = 115/249 (46.18%), Postives = 156/249 (62.65%), Query Frame = 1
Query: 1 FDPMENIVMVDEKWFFMKKNGQRYYLRDGEEAPVSRVQHKSHIQKVMFLAAVGRPRRDTVNNRNFDGKIGIFPFT---------RHRAAGTMETRMVE-VTKAVYKEKMLNDVFPAIKRMWP-GGDRNVLVQQDNAPAHKIADDPDIVAAGTSDGWNIRLLNQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDALIAEVKRVFDAQEPETLAKVWMTYQAVLEQIMLAKGDNTFKLPHLQKATHSRRG 714
F M N+V +DEKWF+M K RYYL E+ P + K +I KVMF+ AV RP+ D +DGK+GIFPFT ++RA GTMET+ + VTKAV ++ +++ + PAIK WP G +++ +QQDNA H A DP+ A SDG++I+L+ QPPNSPDTNILDLGFF +IQSLQ TVD L+ V F P+TL KV+++ QA L +I+ +G N +K+PH+ K R G
Sbjct: 125 FQGMHNVVHIDEKWFYMTKVSDRYYLLPDEDEPYRSCKSKRYITKVMFMCAVSRPQFDANGQATYDGKVGIFPFTEVLPAQRKSKNRARGTMETKAINSVTKAVMRDCLIHKIIPAIKAKWPVGASKDIYIQQDNATPHITAMDPEFQAVAKSDGFDIQLICQPPNSPDTNILDLGFFRAIQSLQHEKPCKTVDELVGNVCSSFTELSPQTLNKVFLSLQACLTEILHCRGGNGYKVPHINKDRLHRNG 373
BLAST of mRNA_F-serratus_M_contig80.19386.1 vs. uniprot
Match: A0A6H5KWV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWV2_9PHAE) HSP 1 Score: 226 bits (575), Expect = 7.290e-67 Identity = 116/207 (56.04%), Postives = 146/207 (70.53%), Query Frame = 1
Query: 16 NIVMVDEKWFFMKKNGQRYYLRDGEEAPVSRVQHKSHIQKVMFLAAVGRPRRDTVNNRNFDGKIGIFPFT---------RHRAAGTMETRMVEVTKAVYKEKMLNDVFPAIKRMWPGGDRNVLVQQDNAPAHKIADDPDIVAAGTSDGWNIRLLNQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDALIAEVKRVFDAQEPETLAK 609
+ + +DEKWF++ K GQRYY +GE P+ +VQHKSH+ KVMFLAAV RPR D+ +R FDGKIGI+PFT R+ AAGTM T VEV + +YK K+ N+VFP I+ +P + QQ+NAP H+ +DPD+VAA I L+NQPPNSPD NILDLGFFNSIQSLQDRTT TV+ L+AEV+R AQ+PETL +
Sbjct: 56 DFLHLDEKWFYICKQGQRYYFYEGEHLPIRKVQHKSHVIKVMFLAAVARPRYDSSRSRQFDGKIGIYPFTVQRAAQRNGRNMAAGTMVTHSVEVNRTLYK-KLNNNVFPDIRAKFPSSPI-IFAQQENAPGHRAMEDPDVVAAAGQGAGRIELVNQPPNSPDCNILDLGFFNSIQSLQDRTTPTTVEELVAEVERALWAQKPETLGR 260
BLAST of mRNA_F-serratus_M_contig80.19386.1 vs. uniprot
Match: A0A6P6X993_COFAR (uncharacterized protein LOC113741020 n=2 Tax=Coffea TaxID=13442 RepID=A0A6P6X993_COFAR) HSP 1 Score: 213 bits (542), Expect = 9.120e-65 Identity = 112/250 (44.80%), Postives = 160/250 (64.00%), Query Frame = 1
Query: 1 FDPMENIVMVDEKWFFMKKNGQRYYLRDGEEAPVSRVQHKSHIQKVMFLAAVGRPRRDTVNNRNFDGKIGIFPF---------TRHRAAGTMETR-MVEVTKAVYKEKMLNDVFPAIKRMWPGGD--RNVLVQQDNAPAHKIADDPDIVAAGTSDGWNIRLLNQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDALIAEVKRVFDAQEPETLAKVWMTYQAVLEQIMLAKGDNTFKLPHLQKATHSRRG 714
F+ M N+V +DEKWF+M K ++YYL EE P+ + K I KVMFLAAV RPR D N++FDGKIGIFPF +++R AGT+ET+ ++ VTK VY+ ++++V PAI+ WP D + +QQDNA H D + + A T +G++IRL QPPNSPD N+LDLG+F +IQSLQ + N++D LI+ V++ FD E+L V++T Q + ++M G N +K+PH+ K R G
Sbjct: 55 FENMFNMVHIDEKWFYMTKESEKYYLHPEEEHPMRTCRSKKFIVKVMFLAAVARPRFDCSRNKHFDGKIGIFPFAFKEPAKRNSKNRVAGTLETKPILSVTKEVYRRCLIDNVLPAIRAKWPQSDVISPIFIQQDNAKPHIDPMDVEFIEAATREGFDIRLSFQPPNSPDMNVLDLGYFRAIQSLQHQEAPNSIDELISAVEKSFDELSSESLNNVFLTLQLCMLEVMKNCGGNNYKVPHIGKQRLIRDG 304
BLAST of mRNA_F-serratus_M_contig80.19386.1 vs. uniprot
Match: UPI000B906F28 (uncharacterized protein LOC110892967 n=1 Tax=Helianthus annuus TaxID=4232 RepID=UPI000B906F28) HSP 1 Score: 211 bits (537), Expect = 1.370e-64 Identity = 110/249 (44.18%), Postives = 154/249 (61.85%), Query Frame = 1
Query: 1 FDPMENIVMVDEKWFFMKKNGQRYYLRDGEEAPVSRVQHKSHIQKVMFLAAVGRPRRDTVNNRNFDGKIGIFPFTR---------HRAAGTMETR-MVEVTKAVYKEKMLNDVFPAIKRMWPGGDRN-VLVQQDNAPAHKIADDPDIVAAGTSDGWNIRLLNQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDALIAEVKRVFDAQEPETLAKVWMTYQAVLEQIMLAKGDNTFKLPHLQKATHSRRG 714
F M N+V +DEKWF++ K +RYYL GE+ P+ + K I KVMFLAAV RPR DT N F GKIGIFPFT+ +R AGT+ET+ ++ V K V + +++ V PAI+ WP G + +QQDNA H DD + + DG++IRL QPPNSPD N+LDLGFF++IQSLQ++ L ++D L+ V+ F+ L V++T QA +++IM G N ++ PH+ K R+G
Sbjct: 11 FYDMFNVVHIDEKWFYLSKPSKRYYLLPGEDEPLRTCKSKKFITKVMFLAAVARPRFDTSGNERFSGKIGIFPFTKLEPAKRSSKNRVAGTLETKPILSVIKEVTRSWLIDKVLPAIRDKWPQGHTGPIFIQQDNAKPHNNIDDEQFIQEASRDGFDIRLRFQPPNSPDLNVLDLGFFHAIQSLQEQEVLGSIDELVHAVQTSFEKLSSHELNNVFLTLQACMKEIMKVHGSNHYQTPHIGKGKLERQG 259
BLAST of mRNA_F-serratus_M_contig80.19386.1 vs. uniprot
Match: A0A6P6VBP7_COFAR (uncharacterized protein LOC113715216 n=4 Tax=Coffea TaxID=13442 RepID=A0A6P6VBP7_COFAR) HSP 1 Score: 213 bits (542), Expect = 1.480e-64 Identity = 112/250 (44.80%), Postives = 160/250 (64.00%), Query Frame = 1
Query: 1 FDPMENIVMVDEKWFFMKKNGQRYYLRDGEEAPVSRVQHKSHIQKVMFLAAVGRPRRDTVNNRNFDGKIGIFPF---------TRHRAAGTMETR-MVEVTKAVYKEKMLNDVFPAIKRMWPGGD--RNVLVQQDNAPAHKIADDPDIVAAGTSDGWNIRLLNQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDALIAEVKRVFDAQEPETLAKVWMTYQAVLEQIMLAKGDNTFKLPHLQKATHSRRG 714
F+ M N+V +DEKWF+M K ++YYL EE P+ + K I KVMFLAAV RPR D N++FDGKIGIFPF +++R AGT+ET+ ++ VTK VY+ ++++V PAI+ WP D + +QQDNA H D + + A T +G++IRL QPPNSPD N+LDLG+F +IQSLQ + N++D LI+ V++ FD E+L V++T Q + ++M G N +K+PH+ K R G
Sbjct: 72 FENMFNMVHIDEKWFYMTKESEKYYLHPEEEHPMRTCRSKKFIVKVMFLAAVARPRFDCSRNKHFDGKIGIFPFAFKEPAKRNSKNRVAGTLETKPILSVTKEVYRRCLIDNVLPAIRAKWPQSDVISPIFIQQDNAKPHIDPMDVEFIEAATREGFDIRLSFQPPNSPDMNVLDLGYFRAIQSLQHQEAPNSIDELISAVEKSFDELSSESLNNVFLTLQLCMLEVMKNCGGNNYKVPHIGKQRLIRDG 321
BLAST of mRNA_F-serratus_M_contig80.19386.1 vs. uniprot
Match: UPI001C256EBA (uncharacterized protein LOC121779336 n=3 Tax=Salvia splendens TaxID=180675 RepID=UPI001C256EBA) HSP 1 Score: 216 bits (550), Expect = 1.640e-64 Identity = 112/250 (44.80%), Postives = 155/250 (62.00%), Query Frame = 1
Query: 1 FDPMENIVMVDEKWFFMKKNGQRYYLRDGEEAPVSRVQHKSHIQKVMFLAAVGRPRRDTVNNRNFDGKIGIFPFT---------RHRAAGTMETRMVE-VTKAVYKEKMLNDVFPAIKRMWP-GGDRNVLVQQDNAPAHKIADDPDIVAAGTSDGWNIRLLNQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDALIAEVKRVFDAQEPETLAKVWMTYQAVLEQIMLAKGDNTFKLPHLQKATHSRRGA 717
F+ M N+V +DEKWF++ K+ RYYL EE P + K I KVMFL AVGRP FDGK+GIFPFT ++R GT+ET+ + VT+AV +E ++N + PAI WP + + +QQDNA H DP+ A S+G+ I+L+ QPPNSPDTNILDLGFF +IQSL+D+ + VD L+ V ++ P+TL KV++T Q+VL +I+ +G N +K+PH+ K R GA
Sbjct: 161 FNEMRNVVHIDEKWFYLTKSADRYYLLPDEEEPQRSCRSKRFITKVMFLCAVGRPHFGPNGETLFDGKLGIFPFTEMVPAQRNSKNRPRGTLETKPIPAVTQAVTREWLINKIIPAIHSKWPTSASKEIYIQQDNAKPHISTTDPEFEEAANSNGFKIQLICQPPNSPDTNILDLGFFRAIQSLKDKKACSNVDELLQNVSMAYEELTPQTLNKVFLTLQSVLSEILEVQGGNNYKIPHMNKDRLERIGA 410
BLAST of mRNA_F-serratus_M_contig80.19386.1 vs. uniprot
Match: A0A485LD71_9STRA (Aste57867_19703 protein n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LD71_9STRA) HSP 1 Score: 211 bits (538), Expect = 2.980e-64 Identity = 110/244 (45.08%), Postives = 149/244 (61.07%), Query Frame = 1
Query: 22 VMVDEKWFFMKKNGQRYYLRDGEEAPVSRVQHKSHIQKVMFLAAVGRPRRDTVNNRNFDGKIGIFPFTRHRAA---------GTMETRMVEVTKAVYKEKMLNDVFPAIKRMWPGGDRNVL-VQQDNAPAHKIADDPDIVAAGTSDGWNIRLLNQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDALIAEVKRVFDAQEPETLAKVWMTYQAVLEQIMLAKGDNTFKLPHLQKATHSRRGASI 723
V +DEKWFF+ + +RYYL EE PV + K HI KVMFL AV RPR D +R +DGKIG +PF H A G T+ + VTK VY++ +++ V PAIK WPG R+ + +QQDNA H D + +AG DGW+I+L QP SPD N+LDLGFFN+IQSLQ R+ T+D L+ V + F+ E L K +MT Q V+E+ + G+N + LPH+QK +R G+ +
Sbjct: 5 VHIDEKWFFLTQINRRYYLWPDEELPVRKCNSKRHIVKVMFLTAVARPRWDFKRHRMWDGKIGTWPFIEHTVAQRRSKNRDKGAPITKPLNVTKKVYRQYLIDKVIPAIKSQWPGQHRHTIYLQQDNAKPHVAVSDSAVCSAGHEDGWDIKLTAQPAMSPDFNVLDLGFFNAIQSLQHRSLTQTIDELVVAVHKAFNELEWRVLDKTFMTLQKVMEESLKQNGNNAYLLPHIQKDKLAREGSFV 248
BLAST of mRNA_F-serratus_M_contig80.19386.1 vs. uniprot
Match: A0A6A5AA16_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AA16_9STRA) HSP 1 Score: 216 bits (549), Expect = 3.020e-64 Identity = 110/238 (46.22%), Postives = 153/238 (64.29%), Query Frame = 1
Query: 10 MENIVMVDEKWFFMKKNGQRYYLRDGEEAPVSRVQHKSHIQKVMFLAAVGRPRRDTVNNRNFDGKIGIFPF---------TRHRAAGTMETRMVEVTKAVYKEKMLNDVFPAIKRMWPGG-DRNVLVQQDNAPAHKIADDPDIVAAGTSDGWNIRLLNQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDALIAEVKRVFDAQEPETLAKVWMTYQAVLEQIMLAKGDNTFKLPHLQK 693
M + V +DEKWF++ + +R+YL E P + Q K HI KVMFL AV RPR D+ + + +DGK+G++PF +++R GT T + VTK VY+ +++ V PAI+ WPG + VQQDNA H DDP+++AAG +GWNI+L+ QP SPD N+LDLGFFN+IQSLQ +TT T+D LI V+ F+ L K +MT Q V+E+ M + GDN +KLPHL+K
Sbjct: 166 MLDCVHIDEKWFYITQVNRRFYLWHDEPTPQRKAQSKRHITKVMFLCAVARPRHDSAHRKMWDGKVGLWPFVETQLAKRRSKNRDRGTPVTVPMTVTKPVYRRFLVDKVIPAIQAQWPGRRGATIYVQQDNAKPHVAVDDPEVLAAGRKEGWNIQLMAQPAQSPDFNVLDLGFFNAIQSLQHQTTARTIDDLIKCVEDAFENLAWRVLDKTFMTLQKVMEEAMRSSGDNVYKLPHLKK 403
BLAST of mRNA_F-serratus_M_contig80.19386.1 vs. uniprot
Match: UPI001C25BB84 (uncharacterized protein LOC121760626 n=4 Tax=Salvia splendens TaxID=180675 RepID=UPI001C25BB84) HSP 1 Score: 214 bits (546), Expect = 6.620e-64 Identity = 111/242 (45.87%), Postives = 149/242 (61.57%), Query Frame = 1
Query: 1 FDPMENIVMVDEKWFFMKKNGQRYYLRDGEEAPVSRVQHKSHIQKVMFLAAVGRPRRDTVNNRNFDGKIGIFPFT---------RHRAAGTMETRMVE-VTKAVYKEKMLNDVFPAIKRMWP-GGDRNVLVQQDNAPAHKIADDPDIVAAGTSDGWNIRLLNQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDALIAEVKRVFDAQEPETLAKVWMTYQAVLEQIMLAKGDNTFKLPHLQK 693
F M N+V +DEKWF+M K RYYL E+ P + K +I KVMF+ AV RP +DGK+GIFPFT ++RA GTMET+ + VTK+V K+ ++ + PAIK WP G +++ +QQDNA H A D D A SDG+ I+L+ QPPNSPDTNILDLGFF +IQSLQ TVD L+ V F+ P+TL KV+++ QA L +I+ + N +K+PH+ K
Sbjct: 162 FQSMHNVVHIDEKWFYMTKVSDRYYLLPDEDEPYRTCKSKRYITKVMFMCAVSRPHFGINGQSTYDGKVGIFPFTEFLPAQRRSKNRARGTMETKAINSVTKSVMKDCLIQQIIPAIKAKWPVGASKDIYIQQDNATPHITAMDADFQAVANSDGFRIQLICQPPNSPDTNILDLGFFRAIQSLQHEKPCKTVDELVGNVCSSFEELSPQTLNKVFLSLQACLNEILQCRSRNGYKVPHINK 403 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig80.19386.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig80.19386.1 >prot_F-serratus_M_contig80.19386.1 ID=prot_F-serratus_M_contig80.19386.1|Name=mRNA_F-serratus_M_contig80.19386.1|organism=Fucus serratus male|type=polypeptide|length=238bp MENIVMVDEKWFFMKKNGQRYYLRDGEEAPVSRVQHKSHIQKVMFLAAVGback to top mRNA from alignment at F-serratus_M_contig80:534509..535231- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig80.19386.1 ID=mRNA_F-serratus_M_contig80.19386.1|Name=mRNA_F-serratus_M_contig80.19386.1|organism=Fucus serratus male|type=mRNA|length=723bp|location=Sequence derived from alignment at F-serratus_M_contig80:534509..535231- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig80:534509..535231- >mRNA_F-serratus_M_contig80.19386.1 ID=mRNA_F-serratus_M_contig80.19386.1|Name=mRNA_F-serratus_M_contig80.19386.1|organism=Fucus serratus male|type=CDS|length=1428bp|location=Sequence derived from alignment at F-serratus_M_contig80:534509..535231- (Fucus serratus male)back to top |