mRNA_F-serratus_M_contig80.19376.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig80.19376.1 vs. uniprot
Match: D8LQ55_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ55_ECTSI) HSP 1 Score: 427 bits (1097), Expect = 8.250e-149 Identity = 223/269 (82.90%), Postives = 242/269 (89.96%), Query Frame = 3
Query: 24 MARNEEKAQMMMNKWTTMKEQMAKPERSRRPFLASECDNLQDAELWRRDIIRETTKSVHLIQNAGAGEHKIRDLNDQINKLLRERKHWDKRIAELGGPDYAANAPKLYNADGRELPGGGGYMYFGAAKELPGVRELFHKSDVENPRRTRKDMYQHVTPDYYGYRDEEDGILVAKEAVVEKRRIEEAVSEWEAEKRRKIQDGEQVV---VDDDDVEDVQGQAAXXXXXXTSAQVRAHVPVPSQDAIKEAILKRKKKSLLKRLDAEDDEAE 821
MARNEEKAQMMMNKWTTMKEQMAKPER RRPFL+SECDNLQDAELWRRDIIRET+KSVHLIQNAGAGEHKIRDLNDQINKLLRER HWDKRI ELGGPDYAANAPK Y+ADGRELPGGGGYMYFGAAK LPGVRELFHKSDVENPRRTRKDMYQ +TPDYYGYRDEEDG+LVAKEAV+EKR+++ AVSEW+AEKRR+++DGE+ DD+ XXXXXX SA+VRAHVPVPSQDAIKEAILKRKK +LLKRLD E+D A+
Sbjct: 1 MARNEEKAQMMMNKWTTMKEQMAKPERGRRPFLSSECDNLQDAELWRRDIIRETSKSVHLIQNAGAGEHKIRDLNDQINKLLRERTHWDKRILELGGPDYAANAPKSYDADGRELPGGGGYMYFGAAKGLPGVRELFHKSDVENPRRTRKDMYQFITPDYYGYRDEEDGVLVAKEAVMEKRKVQSAVSEWQAEKRRRLEDGEEEAGGDADDEXXXXXXXXXXXXXXXXXSAEVRAHVPVPSQDAIKEAILKRKKLTLLKRLDGEEDAAD 269
BLAST of mRNA_F-serratus_M_contig80.19376.1 vs. uniprot
Match: W7TA77_9STRA (Pre-mrna-splicing factor isy1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TA77_9STRA) HSP 1 Score: 268 bits (686), Expect = 2.090e-86 Identity = 150/270 (55.56%), Postives = 186/270 (68.89%), Query Frame = 3
Query: 24 MARNEEKAQMMMNKWTTMKEQMAKPERSRRPFLASECDNLQDAELWRRDIIRETTKSVHLIQNAGAGEHKIRDLNDQINKLLRERKHWDKRIAELGGPDYAANAPKLYNADGRELPGGGGYMYFGAAKELPGVRELFHKSDVENPRRTRKDMYQHVTPDYYGYRDEEDGILVAKEAVVEKRRIEEAVSEWEAEKRRKIQDGEQV-------------VVDDDDVEDVQGQAAXXXXXXTSAQVRAHVPVPSQDAIKEAILKRKKKSLLKR 794
MARNEEKAQ M+NKW TMK+ +A ++ RRPFL+S+C L +AE WRR II+E TK V +QNAG GEH++RDLNDQINKLLRE+ HW KRI ELGGPDY P+ Y+ADGRELPGGGGY YFGAAK+LPGV+ELF KS + RRTR DMY+ + PDYYGYRDEEDGIL+ KE EK I AV +++ R + +GE+ XXXXXX SA V+AHVPVP Q+ I A++++KK++LL +
Sbjct: 1 MARNEEKAQAMLNKWLTMKKDLATGDKERRPFLSSDCHVLSEAERWRRQIIKEVTKKVSEVQNAGLGEHRLRDLNDQINKLLREKYHWQKRIKELGGPDYNRIEPRAYDADGRELPGGGGYRYFGAAKDLPGVKELFQKSAPKEMRRTRGDMYKGIDPDYYGYRDEEDGILLEKEREAEKEAIAAAVRQFKKRAREEKGEGEETEXGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAAVKAHVPVPCQEDIMTALMEKKKRALLSK 270
BLAST of mRNA_F-serratus_M_contig80.19376.1 vs. uniprot
Match: A0A7S2S7Y0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S7Y0_9STRA) HSP 1 Score: 268 bits (685), Expect = 5.330e-86 Identity = 150/278 (53.96%), Postives = 190/278 (68.35%), Query Frame = 3
Query: 24 MARNEEKAQMMMNKWTTMKEQMAK---PERSRRPFLASECDNLQDAELWRRDIIRETTKSVHLIQNAGAGEHKIRDLNDQINKLLRERKHWDKRIAELGGPDYAANAPKLYNADGRELPGGGGYMYFGAAKELPGVRELFHKSDVENPRRTRKDMYQHVTPDYYGYRDEEDGILVAKEAVVEKRRIEEAVSEWEAEKRRKIQ----DGEQVVVDD------DDVEDVQ-------GQAAXXXXXXTSAQVRAHVPVPSQDAIKEAILKRKKKSLLKRL 797
MARNEEKA ++NKW TMK + AK P+R RP+LA+ECD+L+ AE WR D+I+E +K + IQNAG GEH+IRDLNDQINKLLRE+ HW KRI ELGGPDY A P+ ++ADGRELPGGGGY YFGAAKELPGVRELF + PRRTR +Y+ +TPDYYGYRDE+D L+ KEA+ EK IEEA ++ + KR++ +GE DD + G+A +S +AHVPVPSQD +K+AIL +K+ LL++L
Sbjct: 1 MARNEEKAMSLLNKWVTMKSEFAKGGGPQR--RPYLATECDDLRQAERWRLDVIKEVSKGIGEIQNAGLGEHRIRDLNDQINKLLREKFHWQKRIRELGGPDYNAIEPRSFDADGRELPGGGGYKYFGAAKELPGVRELFQAEAPQRPRRTRAQIYKTITPDYYGYRDEDDEDLLRKEALAEKEAIEEADAQHQRLKRQRXXXXXXNGEXXXXXXXXXXXXDDAAAMAAAAHSNFGEAMARASAASSTVAKAHVPVPSQDEVKQAILDHRKQQLLQQL 276
BLAST of mRNA_F-serratus_M_contig80.19376.1 vs. uniprot
Match: UPI000C03B492 (pre-mRNA-splicing factor ISY1 homolog n=3 Tax=Astrocoeniina TaxID=123757 RepID=UPI000C03B492) HSP 1 Score: 247 bits (630), Expect = 8.810e-78 Identity = 136/272 (50.00%), Postives = 177/272 (65.07%), Query Frame = 3
Query: 24 MARNEEKAQMMMNKWTTMKEQMA-KPERSRRPFLASECDNLQDAELWRRDIIRETTKSVHLIQNAGAGEHKIRDLNDQINKLLRERKHWDKRIAELGGPDYAANAPKLYNADGRELPGGGGYMYFGAAKELPGVRELFHKSDVENPRRTRKDMYQHVTPDYYGYRDEEDGILVAKEAVVEKRRIEEAVSEWEAEKRRKIQDGEQVVVDDDDVEDVQGQAAXXXXXXTSAQVR----------AHVPVPSQDAIKEAILKRKKKSLLKRLDAE 806
MARN EKA M+ +W ++ + A K + RRPFLA+ECDNLQ+AE WR+ IIRE K V IQNAG GE +IRDLND+INKLLRE++HW+ RI ELGGPDYA PK+ + +G+E+PG GY YFGAAK+LPGVRELF + PR+TR ++Y+ V DYYGYRDE+DG+LV E VEK I A+ EWE RK + GE V D + E++ + AHVPVPSQ ++E +++RKK LL++ +E
Sbjct: 1 MARNAEKAMTMLARWYDLQRKEAGKGIKERRPFLATECDNLQEAEKWRQQIIREVAKKVAQIQNAGLGEFRIRDLNDEINKLLREKRHWEDRIKELGGPDYAKIGPKMLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEQEPPAPPRKTRGELYKDVDADYYGYRDEDDGVLVPLEQEVEKEAIARALDEWE----RKKEAGELVTEQDQEEENIYAVTKEQEESDEDMETDQTEEGNQPFVAHVPVPSQKEVEEMLVQRKKMELLEKYASE 268
BLAST of mRNA_F-serratus_M_contig80.19376.1 vs. uniprot
Match: A7RT52_NEMVE (Predicted protein n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7RT52_NEMVE) HSP 1 Score: 243 bits (621), Expect = 1.950e-76 Identity = 134/272 (49.26%), Postives = 177/272 (65.07%), Query Frame = 3
Query: 24 MARNEEKAQMMMNKW-TTMKEQMAKPERSRRPFLASECDNLQDAELWRRDIIRETTKSVHLIQNAGAGEHKIRDLNDQINKLLRERKHWDKRIAELGGPDYAANAPKLYNADGRELPGGGGYMYFGAAKELPGVRELFHKSDVENPRRTRKDMYQHVTPDYYGYRDEEDGILVAKEAVVEKRRIEEAVSEWEAEKRRKIQDGEQVVVDDDDVEDVQ----GQAAXXXXXXTSAQVR------AHVPVPSQDAIKEAILKRKKKSLLKRLDAE 806
MARN EKA M+++W +++ K + RRPFLA+ECDNLQ+AE WR IIRE K V IQNAG GE +IRDLND+INKLLRE++HW+ RI ELGGPDY PK+ + +G+E+PG GY YFGAAKELPGVRELF + PR+TR ++Y+ + DYYGYRDE+DG+LV E E+ I A+ EW +RK ++G QV ++D ED+ G T AHVPVPSQ ++E +++RKK+ LL + +E
Sbjct: 1 MARNAEKAMTMLSRWYDVQRKEAGKGIKERRPFLATECDNLQEAEKWRHQIIREVAKKVAQIQNAGLGEFRIRDLNDEINKLLREKRHWEDRIKELGGPDYGKIGPKMLDHEGKEVPGNRGYKYFGAAKELPGVRELFEQEPPAPPRKTRGELYKDIDADYYGYRDEDDGVLVPIEQEAEEEAISRAMDEW----KRKKEEG-QVELEDXXXEDIYAVKPGPEGDDEDMDTEEGAEKEQSFVAHVPVPSQKEVEELLVQRKKRELLDKYASE 267
BLAST of mRNA_F-serratus_M_contig80.19376.1 vs. uniprot
Match: K3X334_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X334_GLOUD) HSP 1 Score: 238 bits (606), Expect = 3.630e-75 Identity = 116/202 (57.43%), Postives = 156/202 (77.23%), Query Frame = 3
Query: 24 MARNEEKAQMMMNKWTTMKEQMAKPERSRRPFLASECDNLQDAELWRRDIIRETTKSVHLIQNAGAGEHKIRDLNDQINKLLRERKHWDKRIAELGGPDYAANAPKLYNADGRELPGGGGYMYFGAAKELPGVRELFHKSDVENPRRTRKDMYQHVTPDYYGYRDEEDGI-LVAKEAVVEKRRIEEAVSEW---EAEKRRKI 617
MARNEEKAQ ++N+WT+MK+ + ++RRP+LAS+CDN++DAE WRR IIRE +K V IQNAG+GEH IRDLND+INK +RE++HW+KRI ELGGPDY+ + P+ Y+ADG + GGGGY YFGAAK LPGVRELF K + +RTR+DM++++ PDYYG+RDEED L+ +E VE + A+ EW EAE++ ++
Sbjct: 1 MARNEEKAQSLLNRWTSMKQDFSDTFKNRRPYLASQCDNIKDAERWRRQIIREISKKVADIQNAGSGEHVIRDLNDEINKRMREKRHWEKRIVELGGPDYSRSQPQAYDADGSSVQGGGGYKYFGAAKNLPGVRELFQKEERAPKKRTRQDMFKNIEPDYYGFRDEEDDPQLLQEELEVEAALQKAAIEEWNRVEAERKSQV 202
BLAST of mRNA_F-serratus_M_contig80.19376.1 vs. uniprot
Match: A0A2C9JS12_BIOGL (Uncharacterized protein n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9JS12_BIOGL) HSP 1 Score: 240 bits (613), Expect = 4.450e-75 Identity = 134/287 (46.69%), Postives = 184/287 (64.11%), Query Frame = 3
Query: 24 MARNEEKAQMMMNKWTTMKEQMAKPERSRRPFLASECDNLQDAELWRRDIIRETTKSVHLIQNAGAGEHKIRDLNDQINKLLRERKHWDKRIAELGGPDYAANAPKLYNADGRELPGGGGYMYFGAAKELPGVRELFHKSDVENPRRTRKDMYQHVTPDYYGYRDEEDGILVAKEAVVEKRRIEEAVSEWEAEKRRKIQDGE----------------QVVVDDDDVEDVQGQAAXXXXXXTSAQVR---AHVPVPSQDAIKEAILKRKKKSLLKRLDAEDDEAEDI 827
MARN EKA + +W + K E+ RRP+LAS+CDNLQ+AE WRR II E ++ V IQNAG GE K+RDLND+INKLLRE+ HW+ RI EL GPDY PK+ ++DG+E+PG GY YFGAAK+LPGVRELF + PR+TR ++ + + DYYGYRDE+DGI++ EA VEK+ I+ V EW+ EK+ K+Q GE + + + DD ED + + + AHVPVPSQ I++A+L RKK L++R +++ + E++
Sbjct: 1 MARNSEKAMTTLARWRASQVGGIK-EKERRPYLASDCDNLQEAEKWRRQIIGEISRKVAQIQNAGLGEFKLRDLNDEINKLLREKGHWEDRIVELNGPDYKKTGPKMLDSDGKEVPGNKGYKYFGAAKDLPGVRELFDQEPAPAPRKTRAELMKDIDADYYGYRDEDDGIIIPLEAEVEKQVIKTKVQEWK-EKQNKVQTGEMTHEEAHGAEEELFSKEALAEKDDEEDESLKPSTSKDFYREFDKQHFIAHVPVPSQKEIEQALLHRKKMELIQRYASDNLQEEEM 285
BLAST of mRNA_F-serratus_M_contig80.19376.1 vs. uniprot
Match: D0NZZ7_PHYIT (Pre-mRNA-splicing factor ISY1 n=19 Tax=Phytophthora TaxID=4783 RepID=D0NZZ7_PHYIT) HSP 1 Score: 237 bits (605), Expect = 4.980e-75 Identity = 119/207 (57.49%), Postives = 155/207 (74.88%), Query Frame = 3
Query: 24 MARNEEKAQMMMNKWTTMKEQMAKPERSRRPFLASECDNLQDAELWRRDIIRETTKSVHLIQNAGAGEHKIRDLNDQINKLLRERKHWDKRIAELGGPDYAANAPKLYNADGRELPGGGGYMYFGAAKELPGVRELFHKSDVENPRRTRKDMYQHVTPDYYGYRDEEDGILVAKEAVVEKRRIEEAVSEWEA-EKRRKIQDGEQVVV 641
MARNEEKAQ ++N+WT+MK+ A ++RRP+LAS+CD L+DAE WRR IIRE +K V IQNAG+ EH IRDLND+INK +RE++HW++RIA+LGGPDY+ + P+ Y+ADG + GGY YFGAAK LPGVRELF K DVE +RTR+ MY+H+ PDYYG+RD++D + E EKR + A+ W+A E +RK Q E V V
Sbjct: 1 MARNEEKAQSLLNRWTSMKQDFADTFKNRRPYLASQCDTLKDAERWRRQIIREISKKVADIQNAGSSEHVIRDLNDEINKRIREKRHWERRIAQLGGPDYSKSQPQSYDADGTPVSSVGGYKYFGAAKNLPGVRELFQKEDVEPRKRTRQHMYKHIKPDYYGFRDDDDEQQLKDEDEAEKRLRQRAMDGWDAAEAKRKTQVAELVRV 207
BLAST of mRNA_F-serratus_M_contig80.19376.1 vs. uniprot
Match: UPI0003597C0E (pre-mRNA-splicing factor ISY1 homolog n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI0003597C0E) HSP 1 Score: 239 bits (610), Expect = 1.260e-74 Identity = 137/292 (46.92%), Postives = 184/292 (63.01%), Query Frame = 3
Query: 24 MARNEEKAQMMMNKWTTMKEQMAKPERSRRPFLASECDNLQDAELWRRDIIRETTKSVHLIQNAGAGEHKIRDLNDQINKLLRERKHWDKRIAELGGPDYAANAPKLYNADGRELPGGGGYMYFGAAKELPGVRELFHKSDVENPRRTRKDMYQHVTPDYYGYRDEEDGILVAKEAVVEKRRIEEAVSEWEAEKRRKIQDGE-----------------QVVVDDDDVEDVQGQAAXXXXXXTSAQVR--AHVPVPSQDAIKEAILKRKKKSLLKR-----LDAEDDEAEDI 827
MARN EKA + +W + K E+ RRP+LAS+CDNL +AE WRR II E ++ V IQNAG GE K+RDLND+INKLLRE+ HW+ RI ELGGPDY PK+ ++DG+E+PG GY YFGAAK+LPGVRELF + PR+TR ++ + + DYYGYRDE+DGI+V +E E++ I V EW+ EK+ K++ GE ++ DD +V++V+ + R AHVPVPSQ I+ A+L RKK LL+R L E+ EA+D+
Sbjct: 1 MARNSEKAMTTLARWRASQVGEIK-EKDRRPYLASDCDNLHEAEKWRRQIIGEISRKVAQIQNAGLGEFKLRDLNDEINKLLREKGHWEDRILELGGPDYRKTGPKMLDSDGKEVPGNKGYKYFGAAKDLPGVRELFEQEPPPPPRKTRAELMKDIDADYYGYRDEDDGIIVPQELEAERKAISSKVREWK-EKQNKVKSGEMTEEEATGKEEELFTAAELAEDDLEVQEVEMEPTESTSDLDLDNQRFIAHVPVPSQKEIEAALLMRKKMELLQRYVSDGLQEEEMEAKDM 290
BLAST of mRNA_F-serratus_M_contig80.19376.1 vs. uniprot
Match: A0A0B6ZNF1_9EUPU (Uncharacterized protein n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B6ZNF1_9EUPU) HSP 1 Score: 238 bits (607), Expect = 3.470e-74 Identity = 135/286 (47.20%), Postives = 183/286 (63.99%), Query Frame = 3
Query: 24 MARNEEKAQMMMNKWTTMKEQMAKPERSRRPFLASECDNLQDAELWRRDIIRETTKSVHLIQNAGAGEHKIRDLNDQINKLLRERKHWDKRIAELGGPDYAANAPKLYNADGRELPGGGGYMYFGAAKELPGVRELFHKSDVENPRRTRKDMYQHVTPDYYGYRDEEDGILVAKEAVVEKRRIEEAVSEWEAEKRRKIQDGEQV----------------VVDDDDVEDVQGQAAXXXXXXTSAQVR--AHVPVPSQDAIKEAILKRKKKSLLKRLDAEDDEAEDI 827
MARN EKA + +W + K E+ RRP+LAS+CDNLQ+A+ WRR II E ++ V IQNAG GE K+RDLND+INKLLRE+ HW+ RI ELGGPDY PK+ + DG+E+PG GY YFGA+K+LPGVRELF + PR+TR ++ + + DYYGYRDE+DGI+V E EK+ I+ V EW+ EK+ KIQ GE + +DD+ D + +A + R AHVPVPSQ I+EA+L+RKK L++R ++ + E++
Sbjct: 1 MARNSEKAMTTLARWRASQVGGIK-EKDRRPYLASDCDNLQEADKWRRQIIGEISRKVAQIQNAGLGEFKLRDLNDEINKLLREKGHWEDRIKELGGPDYRKTGPKMLDGDGKEVPGNKGYKYFGASKDLPGVRELFEQEPPPPPRKTRAELMKDIDADYYGYRDEDDGIIVPLELEAEKKAIKFKVREWK-EKQNKIQMGEITQDEAHKPEGELFTPAEINEDDEDSDPEISSAMNAAINDLDKQRFIAHVPVPSQQEIEEALLERKKMELMQRYASDSLQEEEM 284 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig80.19376.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig80.19376.1 >prot_F-serratus_M_contig80.19376.1 ID=prot_F-serratus_M_contig80.19376.1|Name=mRNA_F-serratus_M_contig80.19376.1|organism=Fucus serratus male|type=polypeptide|length=270bp MARNEEKAQMMMNKWTTMKEQMAKPERSRRPFLASECDNLQDAELWRRDIback to top mRNA from alignment at F-serratus_M_contig80:362369..366767- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig80.19376.1 ID=mRNA_F-serratus_M_contig80.19376.1|Name=mRNA_F-serratus_M_contig80.19376.1|organism=Fucus serratus male|type=mRNA|length=4399bp|location=Sequence derived from alignment at F-serratus_M_contig80:362369..366767- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig80:362369..366767- >mRNA_F-serratus_M_contig80.19376.1 ID=mRNA_F-serratus_M_contig80.19376.1|Name=mRNA_F-serratus_M_contig80.19376.1|organism=Fucus serratus male|type=CDS|length=1620bp|location=Sequence derived from alignment at F-serratus_M_contig80:362369..366767- (Fucus serratus male)back to top |