prot_F-serratus_M_contig126.1935.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig126.1935.1
Unique Name	prot_F-serratus_M_contig126.1935.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	404

Homology

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BLAST of mRNA_F-serratus_M_contig126.1935.1 vs. uniprot
Match: D7G6V0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6V0_ECTSI)

HSP 1 Score: 267 bits (682), Expect = 7.590e-82
Identity = 177/428 (41.36%), Postives = 222/428 (51.87%), Query Frame = 0

Query:   24 QNIVTYVGNACHKAMIEVDTAARTMGEEGMKDAILDGIKAIREALDAVSSRLPYDEGAQKEYAQRFLEATKDGAEGPDTPDLRHGP----LVFDTEKMTGIINGDEGT--------EGAVPPRDM------------PCTEQDIVFALGWVRTIISDVQTVLLELDDGDLEELSQRTLVSLRIVVGYFKRTHRTLTRLGLAPKQELSTEKPTFLGDD-------------------------------VDIHKNREGLPWEPLTPKVLEGGQWLVAKGKRSPLIAALVLALAMPVLPMVLPVVFFFGAPVLVGD------VVLQWGASTHVGRVVSRGVWNVFELLGLGWMARKLARKQVWKLGKRELERAGGVVGLTLSAGKGALWTVGHPIEATKRVTGLAVEAGRAVWHAAVWLGGVLATVREGV 390
            +N+     N     ++  D   R +GE+ MK+ I DGI A+R AL+ VS  LP DE  ++EYAQRFLEA+++G  G   P  R G     L+FD    T    G + +        EG V P  M            P TEQDIV ALGWVRT+ISDVQ VLLE DD DLEEL+Q TL+SLRI+VGY K THR+L +L   P Q         +  D                                D H+   GLPW+PL P++L+  + L  +GK  P  AA+VLA A+P          F G               LQWGA+T VGR V  G  N  EL  LGW+A KLA KQ  +L  +EL+RAGGV GL   AG+GALWT  HP+EA     G+A +A  A +  AVW+G +LATVRE V
Sbjct:   24 ENVAITALNFLCVLIVRADKGTRDIGEQHMKEIIADGIGAVRRALEEVSRHLPQDEYTRREYAQRFLEASREG--GRAQPSERRGQGHMALLFDATTSTTPEGGRDESHESVVNSIEGQVSPHQMRRVGDEFGALQLPYTEQDIVSALGWVRTMISDVQNVLLEFDDSDLEELAQMTLISLRILVGYAKSTHRSLAQLCRVPFQPRRERARMAVHADPNNXXXXXXXXXNPAAARVGELFQVDEXXXXXDGHEGG-GLPWDPLAPRLLQEARRLAEEGKERPFTAAVVLAAALP----------FSGXXXXXXXXXXXXXAALQWGAATPVGRTVGHGTKNAVELGKLGWVASKLATKQTLRLASQELDRAGGVTGLACRAGEGALWTARHPVEAAMATVGMAADAASAAYEQAVWMGDLLATVREEV 438

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig126.1935.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig126.1935.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7G6V0_ECTSI	7.590e-82	41.36	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 281..299
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 300..318
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 319..403
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 251..280
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..250
None	No IPR available	TMHMM	TMhelix		coord: 251..273

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig126	contig	F-serratus_M_contig126:8280..14601 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig126.1935.1	mRNA_F-serratus_M_contig126.1935.1	Fucus serratus male	mRNA	F-serratus_M_contig126 8111..15775 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig126.1935.1 ID=prot_F-serratus_M_contig126.1935.1|Name=mRNA_F-serratus_M_contig126.1935.1|organism=Fucus serratus male|type=polypeptide|length=404bp
MSDDSPRVELDSKRLNLGDPALLQNIVTYVGNACHKAMIEVDTAARTMGE
EGMKDAILDGIKAIREALDAVSSRLPYDEGAQKEYAQRFLEATKDGAEGP
DTPDLRHGPLVFDTEKMTGIINGDEGTEGAVPPRDMPCTEQDIVFALGWV
RTIISDVQTVLLELDDGDLEELSQRTLVSLRIVVGYFKRTHRTLTRLGLA
PKQELSTEKPTFLGDDVDIHKNREGLPWEPLTPKVLEGGQWLVAKGKRSP
LIAALVLALAMPVLPMVLPVVFFFGAPVLVGDVVLQWGASTHVGRVVSRG
VWNVFELLGLGWMARKLARKQVWKLGKRELERAGGVVGLTLSAGKGALWT
VGHPIEATKRVTGLAVEAGRAVWHAAVWLGGVLATVREGVSAGQPGRGAT
HDS*