mRNA_F-serratus_M_contig80.19389.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig80.19389.1 vs. uniprot
Match: D7G202_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G202_ECTSI) HSP 1 Score: 105 bits (263), Expect = 2.360e-19 Identity = 114/392 (29.08%), Postives = 155/392 (39.54%), Query Frame = 1
Query: 691 ETAAKAKELQAKMRESREVQEGLLREEREKRRDSIAYKNAAWXXXXXXXXXXXXXXXQEGKMLMEGLNVFLEAKQRVREQRELTDKQERAWRANAKKSEKTLKQRQGAL-AMKHEAHRIRRDQDRDQAALEKEAAEEKRLRRGSAQWRRNEKALESVMKHGSAEGTLDAKRLAEEVCLTAEDRK---------------------------------------------------------------------------------------------------------------ARERDVVNARKTEEEYRRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSVLESKRKEDDEELDRREALREVPPEKTKLEILEDIWSRQAHPAAA 1530
+T +A+ LQ KM E RE+ E L +EER +RR+S+A+++AAW QE +++MEG +F EAK RV++Q+E TDKQERAWRAN +K+L + GA L++ EE+RLRR SAQW RN++ L+ ++ GS + LD +LA+E+ AE RK A +R V +K EEEYRR SV SKR+E+ ELDR E LR+ P +KTKLEILE +W+RQ HPAAA
Sbjct: 165 QTEKQARALQEKMGEQRELNERLAKEERARRRESLAHRSAAWEREREMKKSQRKARKQEQRLVMEGHELFREAKSRVKKQQERTDKQERAWRANRAYLDKSLDE--GAEDXXXXXXXXXXXXXXXXXXXLDRAEEEERRLRRTSAQWGRNKQLLDREIEQGSGKA-LDPFKLADELFQRAESRKEDAEYREAQKALWRESQQRHRRSEARRKVVGEALHEEEREREADLTASKEEGMRDVEAYRQECLRRDRESLDWHRQKFFDDRAVEEWTKGIAKAAETEDRELSELARLDSEAYKRRVEETQKLEEEYRRQQQIEGRFNKEDEELRMREQEAEERRVMLEDRESVSASKRREEQAELDRLEGLRDTPSDKTKLEILEAMWARQTHPAAA 553
BLAST of mRNA_F-serratus_M_contig80.19389.1 vs. uniprot
Match: A0A6H5L5K2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5K2_9PHAE) HSP 1 Score: 62.4 bits (150), Expect = 4.960e-6 Identity = 66/212 (31.13%), Postives = 98/212 (46.23%), Query Frame = 1
Query: 922 REQRELTDKQERAWRANAKKSEKTLKQRQGALAMKHEAHRIRRDQ---DRDQAALEKEAAEEKRLRRG--SAQWRR----NEKALESVMKHGSAEGTLDAKRLAEEVCLTAEDRKARERDVVNARKTEEEYRRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSVLESKRKEDDEELDRREALREVPPEKTKLEILEDIWSRQAHPAAA 1530
+E E + Q+ WRA+ ++ ++ +R+ E R R +++ + EA ++ LRR S W R +++A+E K + + + L+E L E A +R V A+K EEEYRR SV SKR+E+ ELDR E LR+ P +KTKLEILE +W+RQ HPAAA
Sbjct: 121 KEDAEYREDQKALWRASQQRRRRSEARRKVVGEALQEEEREREANLTASKEEGMRDVEAYRQECLRRDRESLDWHRQKFFDDRAVEEWTKGIAKAAEAEDRELSELARLDCE---AYKRRVEEAQKLEEEYRRQQQIEDRFYKEDEELRMREQEAEERRVMLEDRESVSASKRREEQAELDRLEGLRDTPSDKTKLEILEAMWARQTHPAAA 329 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig80.19389.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig80.19389.1 >prot_F-serratus_M_contig80.19389.1 ID=prot_F-serratus_M_contig80.19389.1|Name=mRNA_F-serratus_M_contig80.19389.1|organism=Fucus serratus male|type=polypeptide|length=705bp MATTPSAASAHDACEQDSRKSPSSRQRTLGLASSSDNSKNRSALTPGTDRback to top mRNA from alignment at F-serratus_M_contig80:631082..656996+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig80.19389.1 ID=mRNA_F-serratus_M_contig80.19389.1|Name=mRNA_F-serratus_M_contig80.19389.1|organism=Fucus serratus male|type=mRNA|length=25915bp|location=Sequence derived from alignment at F-serratus_M_contig80:631082..656996+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig80:631082..656996+ >mRNA_F-serratus_M_contig80.19389.1 ID=mRNA_F-serratus_M_contig80.19389.1|Name=mRNA_F-serratus_M_contig80.19389.1|organism=Fucus serratus male|type=CDS|length=4230bp|location=Sequence derived from alignment at F-serratus_M_contig80:631082..656996+ (Fucus serratus male)back to top |