mRNA_F-serratus_M_contig8.19356.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig8.19356.1
Unique NamemRNA_F-serratus_M_contig8.19356.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig8.19356.1 vs. uniprot
Match: D8LRP3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRP3_ECTSI)

HSP 1 Score: 156 bits (394), Expect = 5.300e-40
Identity = 106/274 (38.69%), Postives = 141/274 (51.46%), Query Frame = 1
Query:  460 MSLEILAAHHKKQETNLRLFSIKGVVFDVSEDPEFNIGGAFERLPGHDASRFVALSA-QRSSIGDGDDGFHSLDTGLEDLTYQDHRRLETYYHEMLRGRRVVAVLADEDHSRIFGTPLDPSGES------------TVVDDQAGVIQSPPPSPAATLHVYVEQGEAESVRRLLRHDVIEEENRREGVTGGVEYAPNFDCAEGKDKL----VEAVCPRTGMTPLLKAIEGAAEDVVRALLEAGADVRAKAKLYDNDDSIALAKRLGVGDEIISLL 1230
            M L +LA H         L S+KG+VFDVS+D  +N  GA     GHDASR +  SA  R   GDG      LD GLE L Y++H+RLE Y+ E+ R RR VAVL DED+  IFGTPL  SG++              ++ Q   +++      A LH  VEQG+AE+VR +L     +         GG     +    E + K     V++ CPRTGM+PLLKA+EG +               AKA LYD D ++ LA+RL   D II ++
Sbjct:    1 MPLAVLAGHPT-------LVSVKGIVFDVSDDEAYNHEGALAGCAGHDASRVIGASAGSRRGYGDGGG---KLDAGLEGLRYEEHQRLEAYFVELARSRRAVAVLTDEDYISIFGTPLVASGDTGYTPAAATTASALAINTQTNNVKAL----VAVLHASVEQGDAEAVRNVLSSRYQQPPGEEVEDAGGDADGDSAQIEETQPKSLLVPVDSACPRTGMSPLLKAVEGGS---------------AKAALYDGDTALDLARRLSCSDTIIEMI 245          
BLAST of mRNA_F-serratus_M_contig8.19356.1 vs. uniprot
Match: A0A7S2RSP5_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RSP5_9STRA)

HSP 1 Score: 105 bits (263), Expect = 1.960e-21
Identity = 94/306 (30.72%), Postives = 135/306 (44.12%), Query Frame = 1
Query:  316 PVLGFGATVEASGESSFNDGHASCPLGFGSGSN--------YTPSAVSLSRSGIPRMSLEILAAHHKKQETNLRLFSIKGVVFDVSEDPEFNIGGAFERLPGHDASRFVALSAQRSSIGDGDDGFHSLDTGLEDLTYQDHRRLETYYHEMLRGR-RVVAVLADEDHSRIFGTPLDPSGESTVVDDQAGVIQSPPPSPAATLHVYVEQGEAESVRRLLRHDVIEEENRREGVTGGVEYAPNFDCAEGKDKLVEAVCPRTGMTPLLKAIE-GAAEDVVRALLEAGADVRAKAKLYDNDDSIALAKRLG 1203
            PV G    ++A G         +CPLGFG GS+              + +   +P MSL  L  H+ K     +  S+KG VFDV++D E           G D SR +A+ +   ++         L+  L  LTY+ H+RLE +YH M  GR + VA L+ E++ ++FG         T    QA   +SP    AA +H  +E  +  ++ RL+  D                                 +CPRT +TPL K +E G A ++V  LL AGADV A+A LYD      LA +LG
Sbjct:   47 PVRGHQVPLQALGRQREKAEAPTCPLGFGGGSSAQXXXXXXXXXXGQAQAHQELPEMSLAALGRHNGKIPRMPKFVSVKGSVFDVTQDKESFGVPPLSDCCGSDVSRILAVGSFDPNL---------LNQSLAGLTYEQHQRLEAFYH-MFSGRFKPVARLSAENYEQLFG--------DTFCFSQAPATESP----AAAVHDAIEHQDIAALTRLIDTDPA---------------------------AATLLCPRTRLTPLHKVVEVGGALEMVHLLLSAGADVTAQADLYDGATPGNLATKLG 303          
BLAST of mRNA_F-serratus_M_contig8.19356.1 vs. uniprot
Match: A0A7S3XNJ1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNJ1_HETAK)

HSP 1 Score: 80.5 bits (197), Expect = 2.760e-13
Identity = 76/261 (29.12%), Postives = 112/261 (42.91%), Query Frame = 1
Query:  451 IPRMSLEILAAHHKKQETNLRLFSIKGVVFDVSEDPEFNIGGA-FERLP-------GHDASRFVALSAQRSSIGDGDDGFHSLDTGLEDLTYQDHRRLETYYHEMLRGRRVVAVLADEDHSRIFGTPLD--PSGE-STVVDDQAGVIQSPPPSPAATLHVYVEQGEAESVRRLLRHDVIEEENRREGVTGGVEYAPNFDCAEGKDKLVEAVCPRTGMTPLLKAIEGAAEDVVRALLEAGADVRAKAKLYDNDDSIALAKRL 1200
            +P + L +L AH +       L S++G ++D+S       G A F R         GHD S  +A  +   +         +LD GL+ L Y++ RRL  +  E       V  LA  D+ ++FG P D  P+ E    V               A LH  +E G+A +VR  L  D                             ++ A+C RT ++PL KA+E    ++V  L EAGAD+  KA LYD+D  + LA+RL
Sbjct:   14 LPELPLFVLYAHKE-------LVSVQGDLYDLSAGERAAGGWAPFPRADPKLKPFRGHDISYNLATDSTSHT---------TLDKGLQGLGYEELRRLAGWAAEFRARLPRVGRLAAADYEKMFGHPRDRDPNAEFGGAVAAXXXXXXXXXXXSGAALHRAIEAGDAAAVRSYLESD---------------------------STVLNAICSRTQLSPLHKAVENGHLNIVEILAEAGADLSCKASLYDDDTPLKLAQRL 231          
BLAST of mRNA_F-serratus_M_contig8.19356.1 vs. uniprot
Match: G4ZCR3_PHYSP (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZCR3_PHYSP)

HSP 1 Score: 69.3 bits (168), Expect = 2.110e-9
Identity = 66/238 (27.73%), Postives = 104/238 (43.70%), Query Frame = 1
Query:  505 NLRLFSIKGVVFDVSEDPEFNI-GGAFERLPGHDASRFVALSAQRSSIGDGDDGFHSLD-TGLEDLTYQDHRRLETYYHEMLRGRRVVAVLADEDHSRIFGTPLDPSGESTVVDDQAGVIQSPPPSPAATLHVYVEQGEAESVRRLLRHDVIEEENRREGVTGGVEYAPNFDCAEGKDKLVEAVCPRTGMTPLLKAIEGAAEDVVRALLEAGADVRAKAKLYDNDDSIALAKRLGVGD 1212
            ++R  + +G  +DV+    F   GG F    GHD +  +A+ + R            LD T     T+++   LE Y +   R   +V V A++  S          G++ V+D                LH  VE+            D + +E   + V   +E A +          V AVC RT MTPL KA+E    D+V+ L++AGADV+A+A LYD++  + +A+R    D
Sbjct:   68 DMRTITFQGRRYDVANSSLFQPEGGQFAHFVGHDVTYALAVHSTR---------LEDLDVTPSRGHTFEEQLLLERYRNFFARELALVEVDAEQKES---------GGQAEVID----------------LHQVVEES-----------DGVAQEEGVQRVKKALEVASSDQ--------VNAVCSRTTMTPLHKAVEKHRLDLVKVLVQAGADVKARAALYDDETPLEMARRFHFDD 252          
BLAST of mRNA_F-serratus_M_contig8.19356.1 vs. uniprot
Match: A0A6A4EAQ6_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4EAQ6_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 2.200e-8
Identity = 66/237 (27.85%), Postives = 103/237 (43.46%), Query Frame = 1
Query:  493 KQETNLRLFSIKGVVFDVSEDPEFNI-GGAFERLPGHDASRFVALSAQRSSIGDGDDGFHSLD-TGLEDLTYQDHRRLETYYHEMLRGRRVVAVLADEDHSRIFGTPLDPSGESTVVDDQAGVIQSPPPSPAATLHVYVEQGEAESVRRLLRHDVIEEENRREGVTGGVEYAPNFDCAEGKDKLVEAVCPRTGMTPLLKAIEGAAEDVVRALLEAGADVRAKAKLYDNDDSIALAKR 1197
            K+  ++R  + +G  +DVS    F   GG F    GHD +  +A+ + R            LD T   + T+++   LE Y +   R   +V V A +  S   G   +      VV++  G+IQ                   ESV+R+ +  V+E                         + V A+C RT MTPL KA+E    D+V+ L++AGADV A+A LYD++  + +A R
Sbjct:  204 KELKSMRTITFQGRRYDVSNSSLFQPEGGQFAHFVGHDVTYALAVQSTRDE---------DLDVTPPREYTFEEQLLLERYRNFFARELALVEVDAKQKES---GDQSEIVNLHQVVEESDGMIQE------------------ESVQRMKK--VLE---------------------GASSEQVNAMCTRTTMTPLHKAVEKHRLDLVKVLIQAGADVMARAALYDDETPLEMAHR 387          
BLAST of mRNA_F-serratus_M_contig8.19356.1 vs. uniprot
Match: A0A662WMZ2_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WMZ2_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 2.250e-7
Identity = 76/273 (27.84%), Postives = 109/273 (39.93%), Query Frame = 1
Query:  448 GIPRMSLEILAAHHKKQETNLRLFSIKGVVFDVSEDPEFNIG-GAFERLPGHDASRFVALSAQRSSIGDGDDGFHSLDTGLEDLTYQDHRRLETYYHEMLRGRRVVAVLADEDHSRIFGTPLDPSGESTVVDDQAGVIQSPPPSPAATLHVYVEQGE----AESVRRLLRHDVIEEENRREGVTGGVEYAPNFDCAEGKDKLVEAVCPRTGMTPLLKAIEGAAEDVVRALLEAGADVRAKAKLYDNDDSIALAKRLGVGDEIISLLLPHYAAD 1251
            G     L+ + +  +   + LR  + +G  +DV++   FN   G F    GHD +  +A+ +                T  EDL  Q  R        ML   RV            F   L         D Q   ++S   +    LH  +EQ +    A SV+RL                   E A     AE     V+AVC RT MTPL KA+E    D++  L+ AGADV A+A LYD++  + +A+R    DEI +    H A+D
Sbjct:  198 GFGAKKLDHVVSRARSDSSELRTITFQGRRYDVTDSSLFNPNDGQFAHFVGHDVTYALAVQS----------------TQPEDLDVQPDRAYTFQEQVMLEKYRVA-----------FARELAVLEVDQSTDQQQ--VESETQTEIVNLHPIIEQSDDITPAASVQRL-------------------EQALKDASAE----QVDAVCVRTTMTPLHKAVEKRRLDLMTLLVRAGADVTARAALYDDETPLEMARRFHY-DEIAA----HLASD 413          
BLAST of mRNA_F-serratus_M_contig8.19356.1 vs. uniprot
Match: A0A3M6VKK7_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VKK7_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 2.860e-7
Identity = 66/238 (27.73%), Postives = 99/238 (41.60%), Query Frame = 1
Query:  505 NLRLFSIKGVVFDVSEDPEFNI-GGAFERLPGHDASRFVALSAQRSSIGDGDDGFHSLDTGLE-DLTYQDHRRLETYYHEMLRGRRVVAVLADEDHSRIFGTPLDPSGESTVVDDQAGVIQSPPPSPAATLHVYVEQGEAESVRRLLRHDVIEEENRREGVTGGVEYAPNFDCAEGKDKLVEAVCPRTGMTPLLKAIEGAAEDVVRALLEAGADVRAKAKLYDNDDSIALAKRLGVGD 1212
            N+R  S +G  +DV+    F+  GG F    GHD +   AL+ Q   + D       LD   E   T+++   LE Y +  +  R++V +  DE+ S   G  +D +    +++   G+ Q                   E V  L +          E  TG                 V AVCPRT +TPL KA+E    D+V  L+ AGAD   +A LYD++  + +A R    D
Sbjct:  209 NMRTISFQGRRYDVTNSKLFHPDGGKFAHFVGHDIT--YALAMQSMQVED-------LDVAPEKSYTFEEQLLLERYRN--IFARKLVLLEVDEEQSE-NGNKMDEANLHQLIERSDGIAQD------------------ECVELLKK--------ALENATGD---------------QVNAVCPRTMITPLQKAVEKHRLDLVEVLVRAGADTEERAALYDDETPLQMACRFRFDD 393          
BLAST of mRNA_F-serratus_M_contig8.19356.1 vs. uniprot
Match: M4BMS0_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BMS0_HYAAE)

HSP 1 Score: 60.5 bits (145), Expect = 4.640e-6
Identity = 66/239 (27.62%), Postives = 99/239 (41.42%), Query Frame = 1
Query:  508 LRLFSIKGVVFDVSEDPEFNI-GGAFERLPGHDASRFVALSAQRSSIGDGDDGFHSLDT-GLEDLTYQDHRRLETYYHEMLRGRRVVAVLADEDHSRIFGTPLDPSGESTVVDDQAGVIQSPPPSPAATLHVYVEQGEAESVRRLLRH--DVIEEENRREGVTGGVEYAPNFDCAEGKDKLVEAVCPRTGMTPLLKAIEGAAEDVVRALLEAGADVRAKAKLYDNDDSIALAKRLGVGD 1212
            L+  + +G  +DVS+   F+  GG F    GHD +  +A+ + R            LD       T+ +   LE Y   M   R +  +  D +         +  G+S VV                            SV RL+ +  D+ EEE         V+       + G D+ V AVC RT MTPL KA+E    D+V+ L+ AGAD+ A+A LYD++  + +A R    D
Sbjct:  198 LQTITFQGRRYDVSQTSLFHPDGGQFAHFVGHDVTYALAIQSMR---------VEDLDVVPARAYTFDEQLVLERY--RMFFSRELALIEVDNEQIE------NEDGKSNVV----------------------------SVHRLIENSDDMAEEEC--------VQRLEKMLESAGADQ-VNAVCSRTAMTPLHKAVEKNRFDLVKVLVRAGADIEARAALYDDETPLDMAYRFCFND 382          
BLAST of mRNA_F-serratus_M_contig8.19356.1 vs. uniprot
Match: A0A225WVK3_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WVK3_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 5.200e-6
Identity = 65/240 (27.08%), Postives = 101/240 (42.08%), Query Frame = 1
Query:  505 NLRLFSIKGVVFDVSEDPEFNI-GGAFERLPGHDASRFVALSAQRSSIGDGDDGFHSLD-TGLEDLTYQDHRRLETYYHEMLRGRRVVAVLADEDHSRIFGTPLDPSGESTVVDDQAGVIQSPPPSPAATLHVYVEQGEAESVRRLLRHDVIEEENRREGVTGGVEYAPNFDCAEGKDKLVEAVCPRTGMTPLLKAIEGAAEDVVRALLEAGADVRAKAKLYDNDDSIALAKRLGVGDEI 1218
            NLR  + +G  +DV++   F+  GG F    GHDA+  +A+ + R            LD T     T+++   LE Y +   R   V+ V +  +                   D   V+          LH  +E  E++++ +      +E+      V G               + V AVC RT MTPL KA+E    D V+ L++AGADV A A LYD++  + +A+R    D I
Sbjct:  235 NLRTITFQGRRYDVTDSRLFHPEGGQFAHFVGHDATYALAVQSMR---------IEDLDVTPARAYTFEEQLLLERYRNFFARELAVLEVDSVSEER-----------------DNREVVN---------LHEVIE--ESDTMMQDASAQYLEQ------VLG-----------RASAEQVNAVCNRTTMTPLHKAVEKHRLDFVKVLVQAGADVEAHAALYDDETPLEMARRFHFDDII 420          
BLAST of mRNA_F-serratus_M_contig8.19356.1 vs. uniprot
Match: A0A2P4XZY8_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XZY8_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 8.340e-6
Identity = 67/239 (28.03%), Postives = 102/239 (42.68%), Query Frame = 1
Query:  505 NLRLFSIKGVVFDVSEDPEFNI-GGAFERLPGHDASRFVALSAQRSSIGDGDDGFHSLDTGLEDLTYQDHRRLETYYHEMLRGRRVVAVLADEDHSRIFGTPLDPSGESTVVDDQAGVIQSPPPSPAATLHVYVEQGEAESVRRLLRHDVIEEENRREGVTGGVEYAPNFDCAEGKDKL--VEAVCPRTGMTPLLKAIEGAAEDVVRALLEAGADVRAKAKLYDNDDSIALAKRLGVGD 1212
            +LR  + +G  +DV++   F+   G F    GHD +   AL+ Q    GD       LD   E        R  T+  ++L  R          +   F + L                            + V+  E++++  +  H VIEE +   G+T     A   + A GK     V AVC RT MTPL KA+E    D+V+AL++AGA+V A A LYD++  + +A+R    D
Sbjct:  207 DLRTITFQGRRYDVTDSSLFHPDSGQFAHFVGHDVT--YALAVQSMRAGD-------LDVNPE--------RAYTFEEQLLLER----------YRNFFASEL--------------------------TELEVDSKESDTMTVVNLHQVIEESD---GMTQEA-CAQYLEKALGKASAEQVNAVCARTTMTPLHKAVEKHRLDLVKALVQAGANVEAHAALYDDETPLEMARRFHFDD 388          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig8.19356.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D8LRP3_ECTSI5.300e-4038.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2RSP5_9STRA1.960e-2130.72Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A7S3XNJ1_HETAK2.760e-1329.12Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
G4ZCR3_PHYSP2.110e-927.73Uncharacterized protein (Fragment) n=1 Tax=Phytoph... [more]
A0A6A4EAQ6_9STRA2.200e-827.85Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A662WMZ2_9STRA2.250e-727.84Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A3M6VKK7_9STRA2.860e-727.73Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
M4BMS0_HYAAE4.640e-627.62Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A225WVK3_9STRA5.200e-627.08Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
A0A2P4XZY8_9STRA8.340e-628.03Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig8contigF-serratus_M_contig8:1442953..1446858 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score73.2
Seed ortholog evalue2.8e-10
Seed eggNOG ortholog42099.EPrPV00000018009
Hectar predicted targeting categoryother localisation
EggNOG free text desc.function. Source PGD
EggNOG OGs1MDBQ@121069,2CI0D@1,2QUTW@2759
Ec32 ortholog descriptionCytochrome b5-like heme/steroid binding domain
Ec32 orthologEc-12_000540.1
COG Functional cat.S
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
Exons3
Model size1802
Cds size1077
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig8.19356.1prot_F-serratus_M_contig8.19356.1Fucus serratus malepolypeptideF-serratus_M_contig8 1443486..1446666 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932385.0762463-UTR-F-serratus_M_contig8:1442952..14434851622932385.0762463-UTR-F-serratus_M_contig8:1442952..1443485Fucus serratus maleUTRF-serratus_M_contig8 1442953..1443485 -
1690964282.5529203-UTR-F-serratus_M_contig8:1442952..14434851690964282.5529203-UTR-F-serratus_M_contig8:1442952..1443485Fucus serratus maleUTRF-serratus_M_contig8 1442953..1443485 -
1622932385.1526623-UTR-F-serratus_M_contig8:1446666..14468581622932385.1526623-UTR-F-serratus_M_contig8:1446666..1446858Fucus serratus maleUTRF-serratus_M_contig8 1446667..1446858 -
1690964282.6118422-UTR-F-serratus_M_contig8:1446666..14468581690964282.6118422-UTR-F-serratus_M_contig8:1446666..1446858Fucus serratus maleUTRF-serratus_M_contig8 1446667..1446858 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932385.0987027-CDS-F-serratus_M_contig8:1443485..14436021622932385.0987027-CDS-F-serratus_M_contig8:1443485..1443602Fucus serratus maleCDSF-serratus_M_contig8 1443486..1443602 -
1690964282.5671613-CDS-F-serratus_M_contig8:1443485..14436021690964282.5671613-CDS-F-serratus_M_contig8:1443485..1443602Fucus serratus maleCDSF-serratus_M_contig8 1443486..1443602 -
1622932385.116956-CDS-F-serratus_M_contig8:1443971..14443321622932385.116956-CDS-F-serratus_M_contig8:1443971..1444332Fucus serratus maleCDSF-serratus_M_contig8 1443972..1444332 -
1690964282.5782971-CDS-F-serratus_M_contig8:1443971..14443321690964282.5782971-CDS-F-serratus_M_contig8:1443971..1444332Fucus serratus maleCDSF-serratus_M_contig8 1443972..1444332 -
1622932385.132605-CDS-F-serratus_M_contig8:1446067..14466661622932385.132605-CDS-F-serratus_M_contig8:1446067..1446666Fucus serratus maleCDSF-serratus_M_contig8 1446068..1446666 -
1690964282.5976331-CDS-F-serratus_M_contig8:1446067..14466661690964282.5976331-CDS-F-serratus_M_contig8:1446067..1446666Fucus serratus maleCDSF-serratus_M_contig8 1446068..1446666 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig8.19356.1

>prot_F-serratus_M_contig8.19356.1 ID=prot_F-serratus_M_contig8.19356.1|Name=mRNA_F-serratus_M_contig8.19356.1|organism=Fucus serratus male|type=polypeptide|length=359bp
MKGSCPFSSQWRQAKDTKRPTSSASPTPDGDQQVHSIAPKCPVLGFGATV
EASGESSFNDGHASCPLGFGSGSNYTPSAVSLSRSGIPRMSLEILAAHHK
KQETNLRLFSIKGVVFDVSEDPEFNIGGAFERLPGHDASRFVALSAQRSS
IGDGDDGFHSLDTGLEDLTYQDHRRLETYYHEMLRGRRVVAVLADEDHSR
IFGTPLDPSGESTVVDDQAGVIQSPPPSPAATLHVYVEQGEAESVRRLLR
HDVIEEENRREGVTGGVEYAPNFDCAEGKDKLVEAVCPRTGMTPLLKAIE
GAAEDVVRALLEAGADVRAKAKLYDNDDSIALAKRLGVGDEIISLLLPHY
AADEGYCR*
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mRNA from alignment at F-serratus_M_contig8:1442953..1446858-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig8.19356.1 ID=mRNA_F-serratus_M_contig8.19356.1|Name=mRNA_F-serratus_M_contig8.19356.1|organism=Fucus serratus male|type=mRNA|length=3906bp|location=Sequence derived from alignment at F-serratus_M_contig8:1442953..1446858- (Fucus serratus male)
CAAAAGGTTACAAGGTTACTTCTGAGCTACCGGGGCGACCGGCATAGAGA AAGTAATTACTACCAGTACTCTGTATCCACAAGAGGGAAGCCGGGAACCT CGCATGAAGCTCCATCTAAATCTGGCTACAGCACCGTAGTTTGCATCACT CAACATTTTAGGAACAAGGGCTCATCTTCAAAGATAATTCCAATGAAAGG CTCGTGCCCATTTTCCTCCCAGTGGCGACAAGCAAAGGACACGAAAAGGC CAACGAGCAGCGCTTCACCAACACCAGATGGGGACCAGCAGGTTCATAGC ATTGCTCCCAAGTGTCCGGTGTTGGGCTTTGGGGCGACTGTAGAAGCGAG TGGCGAGTCATCATTCAACGATGGCCACGCTTCGTGTCCACTCGGCTTCG GAAGCGGCAGCAACTATACCCCATCGGCTGTGTCGCTGTCGAGGAGCGGC ATTCCCAGAATGTCCTTAGAGATTCTCGCTGCCCACCATAAAAAGCAAGA AACGAACCTACGTCTTTTCTCCATCAAAGGGGTTGTATTCGATGTTTCTG AGGACCCAGAGTTCAACATCGGAGGAGCTTTTGAGCGATTACCCGGGCAC GATGCGAGCCGCTTTGTTGCCTTGTCCGCCCAGAGATCATCTATCGGCGA CGGCGACGATGGTTTTCACAGCCTCGACACCGGTCTCGAGGATTTGACGT ATCAGGACCATAGGAGACTGGAAACGTACTACCACGAGATGTTGCGCGGA AGACGCGTCGTAGCCGTTCTAGCGGACGAAGACCACAGCAGGTCTGTTCG TTTGTCTCTTCCACTCGTCGCCTGATGACTGACAGAAACAGCAGTAAACT ACACGGCTGAAATATATACTATACAACACGTATCAAATACTGCGAGGATG GAAAAAAATATCGACTTGCAAGTAGTAAGTCTAATATACCGGTGAAATCG ATCCAAGTCACGGGTTGACAAACACTTGCACCGCGATAAAGGGGCACAGG CGTACGTGCGGTAGACCACAGGCTAGCTTGGCAGAGTTATGCAGCACGTT CAGCGGCCCTATGATTTTCGTTGAGAGATATATTGTTCGAGTGAGGGAAG TAGCGCTACCTTTAGTTATGCTCGTTGTTATAGCGCTGAGTTTCTCCAAC ACTACTACTGCTGTTATCTTGATCAATCACCTCACAAAAATAAATGTTTG TCTTTGTTTGACGCTTTCGAACCTTTCTTCCTCAAAACAGAAGGAAAAAG TGCAAATGTTTTGATATTTTTCCTGGAATGTTCCATGCACGTAGCCGTAG CGAAAAGTTTCACAGCAGTTCAGTGATCGAGAGCACACGAGGAGTAATTA AAAGGGGGACTTGAAAAAAACACTCCGGAGTATATTTCAAGTAGGTTGAG TTGAACCCGATTTCTGGGTTCAACTCGATCTTTTACATAAGGAGAAGACT ACACTGGAAGCAACACAGGGTATTCAATCTGCTCATTTTGCCGGGCCTAA TTTGACTCACAATAATGTGCACTGGCAACCTTACCCGGTTGATCCACACT ATGCTATATTTGATGACCATACATACATACCTACATATGTGTATGGTCAC ACATATAGCAAGAGTATGGATCAACCTGGTAAGGTTGCCAATCCTGCCCG TGGTCAGCTGAACAGGGAAAAGAATATTCCCCTGTCCGCGTTCGTGCCTG ATAATTTGGTCTCGCGAGACGGTTTCGGCAGTCCCGTCCCGCGTCAGCCT GCTCATCTCCATACTCAGGCTGAATCTGGTGCTTACTTACGGAATTCCTC CCGAGTTCCGCGGCGGCGTCCATATATTTATATCATATGGCGGTTACGTC ATCGGGTAAGTCCCGAGTTTATCGGGTCACGCAATTGCGTACCGATGGCG TTCACTGTCGAGAGTCCGTCGGCACAGGGCCAGTAAACCTCAAGGTAGTT CCGAACGAGTGCTGCCTTAGCAGGTCACCATGGACCAATTAATATACGCC TCTCTTTCCCACACCCACTATTGGTATGAAGTGGGAGTGTTGAAAGTAAC GGCGAGACATATATAACATACTGTTGAATCCATCATTTATATTTTGACTC AATATGTGCACTGCTGGGTCAATTATCATTAATAGTACACTCCCGTTTCC ATTCAGCCAGCAACCTGTGTCATGGACGGCCCCATAGTGATCGTAAGCAT ACAAGGCGCTTAGAAAAACCTAAGATTCTCTTTCCTTAACTCTAAAAACT ATCTCCACACATCCGTTGCTTCCCTGCATTCCATTCGTTGCTGAATGTTT TGTTATAGGATAAGACGTGTCTCGTAACGGCGATGACAGATACCGCAGAC CGAGGGCTTCAGTGTAAAGAAAAATCTGAAAGCATCAATCTAGTCTACTA AAATATTTTTAGCCTCCACCTGAGTCAGGGAAGCAAAATAGTCAAAATGT TTGGTGCATCAACCGTACGCACATTTCGGTTTCGCCTTCTTTGTCGTTTT GATGAATCATCCTGAATCAACCTCAGAATCTTCGGCACGCCTTTGGACCC CAGCGGTGAATCAACCGTAGTCGATGACCAGGCCGGCGTAATACAATCGC CACCACCGTCACCGGCAGCTACGCTCCATGTCTACGTGGAACAGGGCGAA GCGGAATCGGTGAGGCGACTCCTGAGGCATGATGTCATTGAGGAAGAAAA CCGGCGCGAGGGAGTAACGGGCGGCGTGGAATATGCTCCGAACTTCGACT GTGCCGAGGGCAAGGATAAGCTTGTCGAAGCAGTTTGCCCTCGCACTGGG ATGACCCCCTTGCTCAAGGCGATAGAAGGCGCCGCGGAGGACGTCGTGAG AGCCTTGTTGGAGGCAGGGGCAGACGTCCGAGCAAAGGTATGGTGTGAGA GGAGTGGATATCTACTCTTCTGAACACGATAGACTCAAATTAACAAAATA TTGAACAAAATCAATCCAATGGTATCCCAAAAGAAAATACTGTATTGAGA AAAGACTGCCTTTAACGCAGCAAGAGCCTCCCTCCGACATTCCCTTACTG TAGCAGGGCTTGTCGTAGCGAGAGCTTGGGGAATATCTCGTGGCTCCCCC CGCGGTCCGTTCCGTCGGCATCGGGGATAGAAGTCGATGTCAACGGTACA CCTACCTCTATAAGAATAAAAGAGGTAAGAGAGGAGCGAAGTGCCGCGCC ATCGAATCCACCCTTTGCCCAGATTTATTTGTTCTTCTCGATTTTGACCT GAACAGGCAAAGCTGTACGACAACGACGATTCCATCGCGCTGGCGAAGAG GCTAGGTGTGGGAGACGAGATCATCAGCTTGCTTCTCCCGCACTATGCCG CGGATGAGGGATACTGTAGATAGATCACAGTTTCTTGTATTCTGGTAATG CGACACTCCGAACTCATGTTGTATATTATCATCACTCATGTTACGTATTA ATGGCACGATGAAGCGCCGCAAGTACCATGACGCTTACGCTACTTGCCTC CCGTTGGGGATTCGCGCCGCATCCAATTTCGTCGAATCGTTGCGGCGGTG ACCATAACGACTACCGCGTGGCTAACAAAAAGGGCACCATTTCGATTTCC TTTTCGAAGTGTGAGATCGGCTCGGGGACCGACGCGATTGTCCTGTCTCA TCTGAAGGCGAGGGCCAAAGAGGGCTGGCACGCCTGTTGCCCCGCCAAGG TGAATTTTATCGGTGTAGTGTCATGAGGAGCCGCATTTCGATCCTTCCTT AGCTAAATAGCTGCGATTGTATAACATTTATAGTATAGTACGTATACCGC AGAGTTCCAAGAAGCCGTCTTGTTGCTTCTGTTCGAAAAATCGCTCGACA TGGCGCAAACCGCGGGCACGACGCCTGCTTGCTTATTTTGAAGAAATAAT ATATGA
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Coding sequence (CDS) from alignment at F-serratus_M_contig8:1442953..1446858-

>mRNA_F-serratus_M_contig8.19356.1 ID=mRNA_F-serratus_M_contig8.19356.1|Name=mRNA_F-serratus_M_contig8.19356.1|organism=Fucus serratus male|type=CDS|length=2154bp|location=Sequence derived from alignment at F-serratus_M_contig8:1442953..1446858- (Fucus serratus male)
ATGAAAGGCTCGTGCCCATTTTCCTCCCAGTGGCGACAAGCAAAGGACAC
GAAAAGGCCAACGAGCAGCGCTTCACCAACACCAGATGGGGACCAGCAGG
TTCATAGCATTGCTCCCAAGTGTCCGGTGTTGGGCTTTGGGGCGACTGTA
GAAGCGAGTGGCGAGTCATCATTCAACGATGGCCACGCTTCGTGTCCACT
CGGCTTCGGAAGCGGCAGCAACTATACCCCATCGGCTGTGTCGCTGTCGA
GGAGCGGCATTCCCAGAATGTCCTTAGAGATTCTCGCTGCCCACCATAAA
AAGCAAGAAACGAACCTACGTCTTTTCTCCATCAAAGGGGTTGTATTCGA
TGTTTCTGAGGACCCAGAGTTCAACATCGGAGGAGCTTTTGAGCGATTAC
CCGGGCACGATGCGAGCCGCTTTGTTGCCTTGTCCGCCCAGAGATCATCT
ATCGGCGACGGCGACGATGGTTTTCACAGCCTCGACACCGGTCTCGAGGA
TTTGACGTATCAGGACCATAGGAGACTGGAAACGTACTACCACGAGATGT
TGCGCGGAAGACGCGTCGTAGCCGTTCTAGCGGACGAAGACCACAGCAGA
TGAAAGGCTCGTGCCCATTTTCCTCCCAGTGGCGACAAGCAAAGGACACG
AAAAGGCCAACGAGCAGCGCTTCACCAACACCAGATGGGGACCAGCAGGT
TCATAGCATTGCTCCCAAGTGTCCGGTGTTGGGCTTTGGGGCGACTGTAG
AAGCGAGTGGCGAGTCATCATTCAACGATGGCCACGCTTCGTGTCCACTC
GGCTTCGGAAGCGGCAGCAACTATACCCCATCGGCTGTGTCGCTGTCGAG
GAGCGGCATTCCCAGAATGTCCTTAGAGATTCTCGCTGCCCACCATAAAA
AGCAAGAAACGAACCTACGTCTTTTCTCCATCAAAGGGGTTGTATTCGAT
GTTTCTGAGGACCCAGAGTTCAACATCGGAGGAGCTTTTGAGCGATTACC
CGGGCACGATGCGAGCCGCTTTGTTGCCTTGTCCGCCCAGAGATCATCTA
TCGGCGACGGCGACGATGGTTTTCACAGCCTCGACACCGGTCTCGAGGAT
TTGACGTATCAGGACCATAGGAGACTGGAAACGTACTACCACGAGATGTT
GCGCGGAAGACGCGTCGTAGCCGTTCTAGCGGACGAAGACCACAGCAGAA
TCTTCGGCACGCCTTTGGACCCCAGCGGTGAATCAACCGTAGTCGATGAC
CAGGCCGGCGTAATACAATCGCCACCACCGTCACCGGCAGCTACGCTCCA
TGTCTACGTGGAACAGGGCGAAGCGGAATCGGTGAGGCGACTCCTGAGGC
ATGATGTCATTGAGGAAGAAAACCGGCGCGAGGGAGTAACGGGCGGCGTG
GAATATGCTCCGAACTTCGACTGTGCCGAGGGCAAGGATAAGCTTGTCGA
AGCAGTTTGCCCTCGCACTGGGATGACCCCCTTGCTCAAGGCGATAGAAG
GCGCCGCGGAGGACGTCGTGAGAGCCTTGTTGGAGGCAGGGGCAGACGTC
CGAGCAAAGAATCTTCGGCACGCCTTTGGACCCCAGCGGTGAATCAACCG
TAGTCGATGACCAGGCCGGCGTAATACAATCGCCACCACCGTCACCGGCA
GCTACGCTCCATGTCTACGTGGAACAGGGCGAAGCGGAATCGGTGAGGCG
ACTCCTGAGGCATGATGTCATTGAGGAAGAAAACCGGCGCGAGGGAGTAA
CGGGCGGCGTGGAATATGCTCCGAACTTCGACTGTGCCGAGGGCAAGGAT
AAGCTTGTCGAAGCAGTTTGCCCTCGCACTGGGATGACCCCCTTGCTCAA
GGCGATAGAAGGCGCCGCGGAGGACGTCGTGAGAGCCTTGTTGGAGGCAG
GGGCAGACGTCCGAGCAAAGGCAAAGCTGTACGACAACGACGATTCCATC
GCGCTGGCGAAGAGGCTAGGTGTGGGAGACGAGATCATCAGCTTGCTTCT
CCCGCACTATGCCGCGGATGAGGGATACTGTAGATAGGCAAAGCTGTACG
ACAACGACGATTCCATCGCGCTGGCGAAGAGGCTAGGTGTGGGAGACGAG
ATCATCAGCTTGCTTCTCCCGCACTATGCCGCGGATGAGGGATACTGTAG
ATAG
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