mRNA_F-serratus_M_contig8.19356.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig8.19356.1 vs. uniprot
Match: D8LRP3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRP3_ECTSI) HSP 1 Score: 156 bits (394), Expect = 5.300e-40 Identity = 106/274 (38.69%), Postives = 141/274 (51.46%), Query Frame = 1
Query: 460 MSLEILAAHHKKQETNLRLFSIKGVVFDVSEDPEFNIGGAFERLPGHDASRFVALSA-QRSSIGDGDDGFHSLDTGLEDLTYQDHRRLETYYHEMLRGRRVVAVLADEDHSRIFGTPLDPSGES------------TVVDDQAGVIQSPPPSPAATLHVYVEQGEAESVRRLLRHDVIEEENRREGVTGGVEYAPNFDCAEGKDKL----VEAVCPRTGMTPLLKAIEGAAEDVVRALLEAGADVRAKAKLYDNDDSIALAKRLGVGDEIISLL 1230
M L +LA H L S+KG+VFDVS+D +N GA GHDASR + SA R GDG LD GLE L Y++H+RLE Y+ E+ R RR VAVL DED+ IFGTPL SG++ ++ Q +++ A LH VEQG+AE+VR +L + GG + E + K V++ CPRTGM+PLLKA+EG + AKA LYD D ++ LA+RL D II ++
Sbjct: 1 MPLAVLAGHPT-------LVSVKGIVFDVSDDEAYNHEGALAGCAGHDASRVIGASAGSRRGYGDGGG---KLDAGLEGLRYEEHQRLEAYFVELARSRRAVAVLTDEDYISIFGTPLVASGDTGYTPAAATTASALAINTQTNNVKAL----VAVLHASVEQGDAEAVRNVLSSRYQQPPGEEVEDAGGDADGDSAQIEETQPKSLLVPVDSACPRTGMSPLLKAVEGGS---------------AKAALYDGDTALDLARRLSCSDTIIEMI 245
BLAST of mRNA_F-serratus_M_contig8.19356.1 vs. uniprot
Match: A0A7S2RSP5_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RSP5_9STRA) HSP 1 Score: 105 bits (263), Expect = 1.960e-21 Identity = 94/306 (30.72%), Postives = 135/306 (44.12%), Query Frame = 1
Query: 316 PVLGFGATVEASGESSFNDGHASCPLGFGSGSN--------YTPSAVSLSRSGIPRMSLEILAAHHKKQETNLRLFSIKGVVFDVSEDPEFNIGGAFERLPGHDASRFVALSAQRSSIGDGDDGFHSLDTGLEDLTYQDHRRLETYYHEMLRGR-RVVAVLADEDHSRIFGTPLDPSGESTVVDDQAGVIQSPPPSPAATLHVYVEQGEAESVRRLLRHDVIEEENRREGVTGGVEYAPNFDCAEGKDKLVEAVCPRTGMTPLLKAIE-GAAEDVVRALLEAGADVRAKAKLYDNDDSIALAKRLG 1203
PV G ++A G +CPLGFG GS+ + + +P MSL L H+ K + S+KG VFDV++D E G D SR +A+ + ++ L+ L LTY+ H+RLE +YH M GR + VA L+ E++ ++FG T QA +SP AA +H +E + ++ RL+ D +CPRT +TPL K +E G A ++V LL AGADV A+A LYD LA +LG
Sbjct: 47 PVRGHQVPLQALGRQREKAEAPTCPLGFGGGSSAQXXXXXXXXXXGQAQAHQELPEMSLAALGRHNGKIPRMPKFVSVKGSVFDVTQDKESFGVPPLSDCCGSDVSRILAVGSFDPNL---------LNQSLAGLTYEQHQRLEAFYH-MFSGRFKPVARLSAENYEQLFG--------DTFCFSQAPATESP----AAAVHDAIEHQDIAALTRLIDTDPA---------------------------AATLLCPRTRLTPLHKVVEVGGALEMVHLLLSAGADVTAQADLYDGATPGNLATKLG 303
BLAST of mRNA_F-serratus_M_contig8.19356.1 vs. uniprot
Match: A0A7S3XNJ1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNJ1_HETAK) HSP 1 Score: 80.5 bits (197), Expect = 2.760e-13 Identity = 76/261 (29.12%), Postives = 112/261 (42.91%), Query Frame = 1
Query: 451 IPRMSLEILAAHHKKQETNLRLFSIKGVVFDVSEDPEFNIGGA-FERLP-------GHDASRFVALSAQRSSIGDGDDGFHSLDTGLEDLTYQDHRRLETYYHEMLRGRRVVAVLADEDHSRIFGTPLD--PSGE-STVVDDQAGVIQSPPPSPAATLHVYVEQGEAESVRRLLRHDVIEEENRREGVTGGVEYAPNFDCAEGKDKLVEAVCPRTGMTPLLKAIEGAAEDVVRALLEAGADVRAKAKLYDNDDSIALAKRL 1200
+P + L +L AH + L S++G ++D+S G A F R GHD S +A + + +LD GL+ L Y++ RRL + E V LA D+ ++FG P D P+ E V A LH +E G+A +VR L D ++ A+C RT ++PL KA+E ++V L EAGAD+ KA LYD+D + LA+RL
Sbjct: 14 LPELPLFVLYAHKE-------LVSVQGDLYDLSAGERAAGGWAPFPRADPKLKPFRGHDISYNLATDSTSHT---------TLDKGLQGLGYEELRRLAGWAAEFRARLPRVGRLAAADYEKMFGHPRDRDPNAEFGGAVAAXXXXXXXXXXXSGAALHRAIEAGDAAAVRSYLESD---------------------------STVLNAICSRTQLSPLHKAVENGHLNIVEILAEAGADLSCKASLYDDDTPLKLAQRL 231
BLAST of mRNA_F-serratus_M_contig8.19356.1 vs. uniprot
Match: G4ZCR3_PHYSP (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZCR3_PHYSP) HSP 1 Score: 69.3 bits (168), Expect = 2.110e-9 Identity = 66/238 (27.73%), Postives = 104/238 (43.70%), Query Frame = 1
Query: 505 NLRLFSIKGVVFDVSEDPEFNI-GGAFERLPGHDASRFVALSAQRSSIGDGDDGFHSLD-TGLEDLTYQDHRRLETYYHEMLRGRRVVAVLADEDHSRIFGTPLDPSGESTVVDDQAGVIQSPPPSPAATLHVYVEQGEAESVRRLLRHDVIEEENRREGVTGGVEYAPNFDCAEGKDKLVEAVCPRTGMTPLLKAIEGAAEDVVRALLEAGADVRAKAKLYDNDDSIALAKRLGVGD 1212
++R + +G +DV+ F GG F GHD + +A+ + R LD T T+++ LE Y + R +V V A++ S G++ V+D LH VE+ D + +E + V +E A + V AVC RT MTPL KA+E D+V+ L++AGADV+A+A LYD++ + +A+R D
Sbjct: 68 DMRTITFQGRRYDVANSSLFQPEGGQFAHFVGHDVTYALAVHSTR---------LEDLDVTPSRGHTFEEQLLLERYRNFFARELALVEVDAEQKES---------GGQAEVID----------------LHQVVEES-----------DGVAQEEGVQRVKKALEVASSDQ--------VNAVCSRTTMTPLHKAVEKHRLDLVKVLVQAGADVKARAALYDDETPLEMARRFHFDD 252
BLAST of mRNA_F-serratus_M_contig8.19356.1 vs. uniprot
Match: A0A6A4EAQ6_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4EAQ6_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 2.200e-8 Identity = 66/237 (27.85%), Postives = 103/237 (43.46%), Query Frame = 1
Query: 493 KQETNLRLFSIKGVVFDVSEDPEFNI-GGAFERLPGHDASRFVALSAQRSSIGDGDDGFHSLD-TGLEDLTYQDHRRLETYYHEMLRGRRVVAVLADEDHSRIFGTPLDPSGESTVVDDQAGVIQSPPPSPAATLHVYVEQGEAESVRRLLRHDVIEEENRREGVTGGVEYAPNFDCAEGKDKLVEAVCPRTGMTPLLKAIEGAAEDVVRALLEAGADVRAKAKLYDNDDSIALAKR 1197
K+ ++R + +G +DVS F GG F GHD + +A+ + R LD T + T+++ LE Y + R +V V A + S G + VV++ G+IQ ESV+R+ + V+E + V A+C RT MTPL KA+E D+V+ L++AGADV A+A LYD++ + +A R
Sbjct: 204 KELKSMRTITFQGRRYDVSNSSLFQPEGGQFAHFVGHDVTYALAVQSTRDE---------DLDVTPPREYTFEEQLLLERYRNFFARELALVEVDAKQKES---GDQSEIVNLHQVVEESDGMIQE------------------ESVQRMKK--VLE---------------------GASSEQVNAMCTRTTMTPLHKAVEKHRLDLVKVLIQAGADVMARAALYDDETPLEMAHR 387
BLAST of mRNA_F-serratus_M_contig8.19356.1 vs. uniprot
Match: A0A662WMZ2_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WMZ2_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 2.250e-7 Identity = 76/273 (27.84%), Postives = 109/273 (39.93%), Query Frame = 1
Query: 448 GIPRMSLEILAAHHKKQETNLRLFSIKGVVFDVSEDPEFNIG-GAFERLPGHDASRFVALSAQRSSIGDGDDGFHSLDTGLEDLTYQDHRRLETYYHEMLRGRRVVAVLADEDHSRIFGTPLDPSGESTVVDDQAGVIQSPPPSPAATLHVYVEQGE----AESVRRLLRHDVIEEENRREGVTGGVEYAPNFDCAEGKDKLVEAVCPRTGMTPLLKAIEGAAEDVVRALLEAGADVRAKAKLYDNDDSIALAKRLGVGDEIISLLLPHYAAD 1251
G L+ + + + + LR + +G +DV++ FN G F GHD + +A+ + T EDL Q R ML RV F L D Q ++S + LH +EQ + A SV+RL E A AE V+AVC RT MTPL KA+E D++ L+ AGADV A+A LYD++ + +A+R DEI + H A+D
Sbjct: 198 GFGAKKLDHVVSRARSDSSELRTITFQGRRYDVTDSSLFNPNDGQFAHFVGHDVTYALAVQS----------------TQPEDLDVQPDRAYTFQEQVMLEKYRVA-----------FARELAVLEVDQSTDQQQ--VESETQTEIVNLHPIIEQSDDITPAASVQRL-------------------EQALKDASAE----QVDAVCVRTTMTPLHKAVEKRRLDLMTLLVRAGADVTARAALYDDETPLEMARRFHY-DEIAA----HLASD 413
BLAST of mRNA_F-serratus_M_contig8.19356.1 vs. uniprot
Match: A0A3M6VKK7_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VKK7_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 2.860e-7 Identity = 66/238 (27.73%), Postives = 99/238 (41.60%), Query Frame = 1
Query: 505 NLRLFSIKGVVFDVSEDPEFNI-GGAFERLPGHDASRFVALSAQRSSIGDGDDGFHSLDTGLE-DLTYQDHRRLETYYHEMLRGRRVVAVLADEDHSRIFGTPLDPSGESTVVDDQAGVIQSPPPSPAATLHVYVEQGEAESVRRLLRHDVIEEENRREGVTGGVEYAPNFDCAEGKDKLVEAVCPRTGMTPLLKAIEGAAEDVVRALLEAGADVRAKAKLYDNDDSIALAKRLGVGD 1212
N+R S +G +DV+ F+ GG F GHD + AL+ Q + D LD E T+++ LE Y + + R++V + DE+ S G +D + +++ G+ Q E V L + E TG V AVCPRT +TPL KA+E D+V L+ AGAD +A LYD++ + +A R D
Sbjct: 209 NMRTISFQGRRYDVTNSKLFHPDGGKFAHFVGHDIT--YALAMQSMQVED-------LDVAPEKSYTFEEQLLLERYRN--IFARKLVLLEVDEEQSE-NGNKMDEANLHQLIERSDGIAQD------------------ECVELLKK--------ALENATGD---------------QVNAVCPRTMITPLQKAVEKHRLDLVEVLVRAGADTEERAALYDDETPLQMACRFRFDD 393
BLAST of mRNA_F-serratus_M_contig8.19356.1 vs. uniprot
Match: M4BMS0_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BMS0_HYAAE) HSP 1 Score: 60.5 bits (145), Expect = 4.640e-6 Identity = 66/239 (27.62%), Postives = 99/239 (41.42%), Query Frame = 1
Query: 508 LRLFSIKGVVFDVSEDPEFNI-GGAFERLPGHDASRFVALSAQRSSIGDGDDGFHSLDT-GLEDLTYQDHRRLETYYHEMLRGRRVVAVLADEDHSRIFGTPLDPSGESTVVDDQAGVIQSPPPSPAATLHVYVEQGEAESVRRLLRH--DVIEEENRREGVTGGVEYAPNFDCAEGKDKLVEAVCPRTGMTPLLKAIEGAAEDVVRALLEAGADVRAKAKLYDNDDSIALAKRLGVGD 1212
L+ + +G +DVS+ F+ GG F GHD + +A+ + R LD T+ + LE Y M R + + D + + G+S VV SV RL+ + D+ EEE V+ + G D+ V AVC RT MTPL KA+E D+V+ L+ AGAD+ A+A LYD++ + +A R D
Sbjct: 198 LQTITFQGRRYDVSQTSLFHPDGGQFAHFVGHDVTYALAIQSMR---------VEDLDVVPARAYTFDEQLVLERY--RMFFSRELALIEVDNEQIE------NEDGKSNVV----------------------------SVHRLIENSDDMAEEEC--------VQRLEKMLESAGADQ-VNAVCSRTAMTPLHKAVEKNRFDLVKVLVRAGADIEARAALYDDETPLDMAYRFCFND 382
BLAST of mRNA_F-serratus_M_contig8.19356.1 vs. uniprot
Match: A0A225WVK3_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WVK3_9STRA) HSP 1 Score: 60.5 bits (145), Expect = 5.200e-6 Identity = 65/240 (27.08%), Postives = 101/240 (42.08%), Query Frame = 1
Query: 505 NLRLFSIKGVVFDVSEDPEFNI-GGAFERLPGHDASRFVALSAQRSSIGDGDDGFHSLD-TGLEDLTYQDHRRLETYYHEMLRGRRVVAVLADEDHSRIFGTPLDPSGESTVVDDQAGVIQSPPPSPAATLHVYVEQGEAESVRRLLRHDVIEEENRREGVTGGVEYAPNFDCAEGKDKLVEAVCPRTGMTPLLKAIEGAAEDVVRALLEAGADVRAKAKLYDNDDSIALAKRLGVGDEI 1218
NLR + +G +DV++ F+ GG F GHDA+ +A+ + R LD T T+++ LE Y + R V+ V + + D V+ LH +E E++++ + +E+ V G + V AVC RT MTPL KA+E D V+ L++AGADV A A LYD++ + +A+R D I
Sbjct: 235 NLRTITFQGRRYDVTDSRLFHPEGGQFAHFVGHDATYALAVQSMR---------IEDLDVTPARAYTFEEQLLLERYRNFFARELAVLEVDSVSEER-----------------DNREVVN---------LHEVIE--ESDTMMQDASAQYLEQ------VLG-----------RASAEQVNAVCNRTTMTPLHKAVEKHRLDFVKVLVQAGADVEAHAALYDDETPLEMARRFHFDDII 420
BLAST of mRNA_F-serratus_M_contig8.19356.1 vs. uniprot
Match: A0A2P4XZY8_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XZY8_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 8.340e-6 Identity = 67/239 (28.03%), Postives = 102/239 (42.68%), Query Frame = 1
Query: 505 NLRLFSIKGVVFDVSEDPEFNI-GGAFERLPGHDASRFVALSAQRSSIGDGDDGFHSLDTGLEDLTYQDHRRLETYYHEMLRGRRVVAVLADEDHSRIFGTPLDPSGESTVVDDQAGVIQSPPPSPAATLHVYVEQGEAESVRRLLRHDVIEEENRREGVTGGVEYAPNFDCAEGKDKL--VEAVCPRTGMTPLLKAIEGAAEDVVRALLEAGADVRAKAKLYDNDDSIALAKRLGVGD 1212
+LR + +G +DV++ F+ G F GHD + AL+ Q GD LD E R T+ ++L R + F + L + V+ E++++ + H VIEE + G+T A + A GK V AVC RT MTPL KA+E D+V+AL++AGA+V A A LYD++ + +A+R D
Sbjct: 207 DLRTITFQGRRYDVTDSSLFHPDSGQFAHFVGHDVT--YALAVQSMRAGD-------LDVNPE--------RAYTFEEQLLLER----------YRNFFASEL--------------------------TELEVDSKESDTMTVVNLHQVIEESD---GMTQEA-CAQYLEKALGKASAEQVNAVCARTTMTPLHKAVEKHRLDLVKALVQAGANVEAHAALYDDETPLEMARRFHFDD 388 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig8.19356.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig8.19356.1 >prot_F-serratus_M_contig8.19356.1 ID=prot_F-serratus_M_contig8.19356.1|Name=mRNA_F-serratus_M_contig8.19356.1|organism=Fucus serratus male|type=polypeptide|length=359bp MKGSCPFSSQWRQAKDTKRPTSSASPTPDGDQQVHSIAPKCPVLGFGATVback to top mRNA from alignment at F-serratus_M_contig8:1442953..1446858- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig8.19356.1 ID=mRNA_F-serratus_M_contig8.19356.1|Name=mRNA_F-serratus_M_contig8.19356.1|organism=Fucus serratus male|type=mRNA|length=3906bp|location=Sequence derived from alignment at F-serratus_M_contig8:1442953..1446858- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig8:1442953..1446858- >mRNA_F-serratus_M_contig8.19356.1 ID=mRNA_F-serratus_M_contig8.19356.1|Name=mRNA_F-serratus_M_contig8.19356.1|organism=Fucus serratus male|type=CDS|length=2154bp|location=Sequence derived from alignment at F-serratus_M_contig8:1442953..1446858- (Fucus serratus male)back to top |