mRNA_F-serratus_M_contig8.19352.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig8.19352.1 vs. uniprot
Match: D8LS56_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS56_ECTSI) HSP 1 Score: 346 bits (887), Expect = 3.300e-113 Identity = 229/373 (61.39%), Postives = 252/373 (67.56%), Query Frame = 1
Query: 193 ASRVALKNIPDVTIAAHDLAEETNRSCSVCLDDHELGGKAVKLPCAHIFHRECVWEWLELHCTCPVCRFELETEDRNYERERRVRMKGRRPRYRRRELDGLSIPQIRNLARQQNVDIAGCLEKKDIVRSIVNSGMVELVESETPKYDADELSHMSMRQLRSLMLQAGIEVEGCLERSDLLDRIRSSRLVTVTHHDPFAPPGVAEAASSPAPAASSPTVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHTSWSSIFNWGARSGTAGXXXXXXXXXXXXXX------------------------ATTSPLESMSVKDLRVIMSKLGVTTQGCIEKRDMVERIRACGRYREGLGGGR 1239
ASR ALKNIP+V IAA DLAEETNRSCSVCL+DHELG VKLPCAHIFHRECVWEWLELHCTCPVCRFELETED YERERRVRM+GRRPRYRR+EL+GLSIPQ+RNLAR QNV+IAGCLEK DIVR +++SG +E+V SE P YDA+ELS+M +RQLRSLMLQAGI EGCLE++DLLDRI SSRLVTVTH + PP A S A XX XXXXXXXXXXX G W XXXXXXXXXXXXXX A PLESMSVK+LR I S+LGV+T GC+EKRDMVERIR+CGRYRE G GR
Sbjct: 28 ASRTALKNIPEVKIAALDLAEETNRSCSVCLEDHELGETVVKLPCAHIFHRECVWEWLELHCTCPVCRFELETEDAGYERERRVRMRGRRPRYRRQELEGLSIPQVRNLARGQNVNIAGCLEKADIVRCLLDSGTIEVVNSEIPSYDAEELSNMGLRQLRSLMLQAGIGTEGCLEKADLLDRIASSRLVTVTHGEAVPPP----APPSFAXXXXXXXXXXXRQAPERGATXXXXXXXXXXXARGQGGVEERRWAEPNSNSFSRAGIRPWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGRPLESMSVKELREITSRLGVSTAGCLEKRDMVERIRSCGRYREAAGVGR 396
BLAST of mRNA_F-serratus_M_contig8.19352.1 vs. uniprot
Match: A0A836C9U0_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9U0_9STRA) HSP 1 Score: 182 bits (461), Expect = 1.490e-50 Identity = 97/219 (44.29%), Postives = 140/219 (63.93%), Query Frame = 1
Query: 184 PPPASRVALKNIPDVTIAAHDLAEETNRSCSVCLDDHELGGKAVKLPCAHIFHRECVWEWLELHCTCPVCRFELETEDRNYERERRVRMKGRRPRYRRRELDGLSIPQIRNLARQQNVDIAGCLEKKDIVRSIVNSGMVELVESETPKYDADELSHMSMRQLRSLMLQAGIEVE-GCLERSDLLDRIRSSRLVTVTHHDPFAPPGVAEAASSPAPAASS 837
PPPAS+ AL+ IP+V + DL EE NR CS+CLDDH L +LPCAHIFH+ECV +WL +CTCP CR+ELETE+ +E RR RM+GR R+RRREL+ S+ ++R++A V+ GCLEK D++ I S E+ E+ P+Y +L +++RQL+ +M G+ + G LE++DL+ ++ +S + V G A AA S P++ S
Sbjct: 8 PPPASKKALRQIPEVLVTLDDLVEEANRCCSICLDDHMLAEVVCRLPCAHIFHKECVLDWLLRNCTCPACRYELETENAAFEAGRRQRMQGRTLRFRRRELELSSVARLRSIAGDLGVNTDGCLEKSDLIACIARSPRAEVFEAALPEYTHAQLMALTVRQLKDIMAGVGVLLATGVLEKADLIAQLANSGRIAVVDV------GAAAAAGSHCPSSPS 220
BLAST of mRNA_F-serratus_M_contig8.19352.1 vs. uniprot
Match: A0A482S6I1_9ARCH (RING-type domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S6I1_9ARCH) HSP 1 Score: 170 bits (431), Expect = 2.450e-45 Identity = 115/357 (32.21%), Postives = 176/357 (49.30%), Query Frame = 1
Query: 187 PPASRVALKNIPDVTIAAHDLAEETNRSCSVCLDDHELGGKAVKLPCAHIFHRECVWEWLELHCTCPVCRFELETEDRNYERERRVRMKGRRPRYRRRELDGLSIPQIRNLARQQNVDIAGCLEKKDIVRSIVNSGMVELVESETP-KYDADELSHMSMRQLRSLMLQAGIEVEGCLERSDLLDRIRSSRLV------TVTHHDPFAPPGV-------AEAASS---PAPAASSPTVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHTSWSSIFNWGARSGTAGXXXXXXXXXXXXXXATTSPLESMSVKDLRVIMSKLGVTTQGCIEKRDMVERIRAC 1206
PPAS A+ N+P V + + DL EETN+ C CL + ELG A KLPC H++HR CV +WL+ CTCPVCR+ELET+D YE +R+ RMK R+ R RR E+ S+ Q+R L Q N+ IA C++KK+IV +V SG++++ E P + ++ ++ S+ QL+ L+L G+ G LE+ +L + S + TV D A++ASS P+P+ SS T TS S + + TT+ L+ MS+ +R + ++LGV+T GC++K D+++R++ C
Sbjct: 64 PPASNRAINNLPSVIVTSDDLLEETNKECVFCLVEQELGSTACKLPCGHLYHRGCVVQWLQRKCTCPVCRYELETDDPQYETQRKKRMKTRKLRMRRDEIQSKSVAQLRQLCGQLNLTIAHCIDKKEIVDMMVASGLIDITERVPPIEISYEDFNNKSVSQLKHLLLSFGLSDAGALEKHELRKVLLESERIHIFDGETVVVDDDSMRTNTNSIVSYAADSASSYVDPSPSYSSSYTTTQPSPSSPLASPGVILTVSSSTATTP---------------------TSSSRVTH----------------------RFTTAELQDMSLSRIRSLCTELGVSTAGCLDKLDVIDRLKLC 377
BLAST of mRNA_F-serratus_M_contig8.19352.1 vs. uniprot
Match: A0A8J2SU41_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SU41_9STRA) HSP 1 Score: 168 bits (426), Expect = 2.370e-44 Identity = 85/201 (42.29%), Postives = 127/201 (63.18%), Query Frame = 1
Query: 181 GPPPASRVALKNIPDVTIAAHDLAEETNRSCSVCLDDHELGGKAVKLPCAHIFHRECVWEWLELHCTCPVCRFELETEDRNYERERRVRMKGRRPRYRRRELDGLSIPQIRNLARQQNVDIAGCLEKKDIVRSIVNSGMVELVESETPKYDADE--LSHMSMRQLRSLMLQAGIEVEGCLERSDLLDRIRSSRLVTVTHHD 777
GPPP AL+++P V DLA++ NR C VCL+ E+G +A KLPC H+FH ECV +WL H TCP CR+EL + D +E RR RM R PRYRRREL+ L + ++R LA + + AG EK D+V++++++ +V+++ E + DA ++ S+RQL+ LM G++ C+++ DL+D I +S LV D
Sbjct: 140 GPPPMDEAALRDLPVVRATEEDLAKDGNRECCVCLEAQEVGDRATKLPCGHLFHTECVVQWLRKHGTCPSCRYELASSDAAFEASRRERMARRVPRYRRRELNRLPVRELRALAARGDRVFAGLTEKADLVKALIDANLVQIIPEEVRQLDATRAAVAAWSIRQLKQLMADVGVDSTRCVDKRDLVDAIAASGLVAFAADD 340
BLAST of mRNA_F-serratus_M_contig8.19352.1 vs. uniprot
Match: A0A7S4A164_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A164_9STRA) HSP 1 Score: 158 bits (400), Expect = 3.170e-42 Identity = 88/216 (40.74%), Postives = 128/216 (59.26%), Query Frame = 1
Query: 193 ASRVALKNIPDVTIAAHDLAEETNRSCSVCLDDHELGGKAVKLPCAHIFHRECVWEWLELHCTCPVCRFELETEDRNYERERRV--RMKGRRPRYRRRELDGLSIPQIRNLARQQNVDIAGCLEKKDIVRSIVNSGMVELVESETPKYDADELSHMSMRQLRSLMLQAGIEVEGCLERSDLLDRIRSSRLVTVTHHDPFAPPGVAEAASSPAPAAS 834
AS ALK IP V +AA DL ++ N C++CL+DH G A +LPC H+FH++CV EWL HC CPVCR+EL T+ YER RR R GRR R R+RELD ++I + ++ + GC+E+ D++R ++ S V++V T + EL MS+ + L +AG+ ++G LER D++ + S V + G AE +SP PAA+
Sbjct: 17 ASTSALKRIPIVRVAADDLTKD-NECCTICLEDHVPGELAARLPCGHLFHKDCVVEWLSRHCVCPVCRYELPTDSVVYERTRREHNREGGRRVRVRKRELDAMNIRALLDVLKAAGESARGCVERDDLIRRVLTSSRVDVVAETTVEVSRSELDAMSLGAVARLAKRAGVVIDGALERPDVVALLEQSGRVLIVD-------GAAEETTSPVPAAA 224
BLAST of mRNA_F-serratus_M_contig8.19352.1 vs. uniprot
Match: A0A7R9U2I9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2I9_9STRA) HSP 1 Score: 156 bits (395), Expect = 1.240e-39 Identity = 89/262 (33.97%), Postives = 134/262 (51.15%), Query Frame = 1
Query: 172 RERGPPPASRVALKNIPDVTIAAHDLAEETNRSCSVCLDDHELGGKAVKLPCAHIFHRECVWEWLELHCTCPVCRFELETEDRNYERERRVRMKGRRPRYRRRELDGLSIPQIRNLARQQNV-DIAGCLEKKDIVRSIVNSGMVELV-------------------ESETPKYDADE----------------------------------------------------LSHMSMRQLRSLMLQAGIEVEGCLERSDLLDRI 741
R GPPPASR L+N+P+V ++ DL + N SC +C++DHELG A KLPC HIFH EC+ +WL+ HCTCPVCRFEL TED +E RR RM GR+ +YRRREL+ S+ +I+++ + V L K D+++ +++S ++L+ E + KY ++ LS S+ +LRS+M + GI ++GC+E+SD++ +I
Sbjct: 173 RRTGPPPASRSVLRNLPEVKVSQVDLETDGNESCCICMEDHELGEMATKLPCGHIFHTECIKDWLQRHCTCPVCRFELPTEDAGFEEHRRERMGGRKRKYRRRELESKSVREIKHIMMEIGVRPPPDALMKSDLIQVLIDSEQIQLLPDTDGAAAGAEPSYGHVAREQDNRKYSPEQKQSTTEEKVDEAAATREGVRRRAGERGSGRSGAMPTAPSPRAAPRQESATEVLSKKSVSELRSIMRERGISLQGCIEKSDMVQKI 434
BLAST of mRNA_F-serratus_M_contig8.19352.1 vs. uniprot
Match: A0A7S2XTC7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XTC7_9STRA) HSP 1 Score: 154 bits (390), Expect = 3.430e-39 Identity = 85/203 (41.87%), Postives = 123/203 (60.59%), Query Frame = 1
Query: 178 RGPPPASRVALKNIPDVTIAAHDLAEETNRSCSVCLDDHELGGKAVKLPCAHIFHRECVWEWLELHCTCPVCRFELETEDRNYERERRVRMKGRRPRYRRRELDGLSIPQIRNLARQQNVDIAGCLEKKDIVRSIVNSGMVELVESETP-KYDADELSHMSMRQLRSLMLQAGIEVE--GCLERSDLLDRIRSSRLVTVTHHD 777
+G PPAS+ A++ +P V +A DL +E NR C +C + + L + +LPCAHIFH EC+ WL HCTCPVCR+EL T+D YER R RMK R+PRY R EL+ +SI ++R L V EKKDIV++ V+S ++++ + P +Y A +L M QL+ M +AG+ + LE+ D++ SS V V +
Sbjct: 51 KGAPPASQKAIRQLPTVIVAPEDLVDENNRECCICFEPNSLKDRVTRLPCAHIFHHECIKGWLTRHCTCPVCRYELPTDDSAYERTRVERMKHRKPRYARYELERMSISELRALGDFCKVS-RSFKEKKDIVQACVDSSRIDIIAAPEPVQYRASDLKQMKPGQLKKSMEKAGVFFDPIDVLEKDDMIRIFISSGRVDVLEEE 252
BLAST of mRNA_F-serratus_M_contig8.19352.1 vs. uniprot
Match: A0A7S1WIB1_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1WIB1_ALECA) HSP 1 Score: 150 bits (380), Expect = 1.270e-38 Identity = 106/374 (28.34%), Postives = 174/374 (46.52%), Query Frame = 1
Query: 172 RERGPPPASRVALKNIPDVTIAAHDLAEETNRSCSVCLDDHELGGKAVKLPCAHIFHRECVWEWLELHCTCPVCRFELETEDRNYERERRVRMKGRRPRYRRRELDGLSIPQIRNLARQQNVDIAGCLEKKDIVRSIVNSGMVELVESE------TPKYDAD-------------ELSHMSMRQLRSLMLQAGIEVEGCLERSDLLDRIRSSRLVTVTHHDPFAPPGVAEAASSPAPAASSPTVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHTSWSS--IFNWGARSGTAGXXXXXXXXXXXXXXATTSPLESMSVKDLRVIMSKLGVTTQGCIEKRDMVERIRACGRYREGLG 1230
R+ GPPP S AL+++P + + A+D+A + CS+CLD+ +G A+++PC H++H +CV +WL+ CPVCRFEL T+D YER R+ RM GR+ R R +L S+ ++ LA VD+ GCLEK ++V I S +V+++ ++ +P AD +L MS+ ++R+LM + ++ C E++D++ R+ S + V+ A G +S+P+P HT+ SS + G AG L SV +LR + +LGV+ GC+EK ++V+RI A +++ G
Sbjct: 9 RKTGPPPTSASALRSLPRIKVTAYDIAANESAECSICLDELVIGQPALRIPCGHLYHEDCVKDWLKKSNECPVCRFELPTDDAEYERGRKTRMAGRKLRMRHADLTVKSVQELSRLASFIGVDVRGCLEKSELVEKIAASSLVQIIPTDGVEVGGSPTSTADSSAPGRPSAFSQSQLDAMSIGEVRALMERLSVDSSDCAEKADMVRRLVLSGRILVSSEREAAATG----SSAPSPGRL---------------------------------------------------HTASSSSDVIMGGTEEAAAGVASANG----------AGNLSGKSVGELRRLAKQLGVSLDGCLEKVELVQRIEASPAFQQNSG 317
BLAST of mRNA_F-serratus_M_contig8.19352.1 vs. uniprot
Match: A0A813F9X9_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813F9X9_POLGL) HSP 1 Score: 147 bits (370), Expect = 2.610e-37 Identity = 73/215 (33.95%), Postives = 127/215 (59.07%), Query Frame = 1
Query: 175 ERGPPPASRVALKNIPDVTIAAHDLAEETNRSCSVCLDDHELGGKAVKLPCAHIFHRECVWEWLELHCTCPVCRFELETEDRNYERERRVRMKGRRPRYRRRELDGLSIPQIRNLARQQNVDIAGCLEKKDIVRSIVNSGMVELVESET------------------PKYDADELSHMSMRQLRSLMLQAGIEVEGCLERSDLLDRIRSSRLVTV 765
++G PPA+R +K++P V + A+D+A + CSVCLD+ +G A+++PC H++H +C+ WL+ CPVCR+EL T+D YE+ R +RM R+ R RR +L + ++R LA VD+ GCLEK ++V I S V+++ +E+ PK+ ++L M + L+++M + G++ C E+++L+ ++ +S V V
Sbjct: 22 QKGAPPAARTTMKSLPRVKVTAYDIAANESPECSVCLDELVIGETALRVPCGHLYHEDCIQGWLKKSNECPVCRWELPTDDVEYEKGRVMRMSSRKIRLRRTDLSVKTAQELRRLAHFIAVDVTGCLEKSELVDKIAQSPQVQIIAAESEASHPGSPSRASSSSASRPKFSREQLEAMGISDLKAIMERIGVDTSSCAEQAELVTKLMNSDRVEV 236
BLAST of mRNA_F-serratus_M_contig8.19352.1 vs. uniprot
Match: A0A7S2SCZ0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SCZ0_9STRA) HSP 1 Score: 145 bits (365), Expect = 2.610e-37 Identity = 67/188 (35.64%), Postives = 118/188 (62.77%), Query Frame = 1
Query: 178 RGPPPASRVALKNIPDVTIAAHDLAEETNRSCSVCLDDHELGGKAVKLPCAHIFHRECVWEWLELHCTCPVCRFELETEDRNYERERRVRMKGRRPRYRRRELDGLSIPQIRNLARQQNVDIAGCLEKKDIVRSIVNSGMVELVESETP-KYDADELSHMSMRQLRSLMLQAGI--EVEGCLERSDLL 732
R PPPA + ++ +P + + DL +E NR C +CL+++ L + ++LPCAHI+H +C+ +WL C+CP+CR+EL+T D YE+ R RMK R+PRY R EL+ + I + +L + N+ G EK D++ +I+ SG ++++ + P + +LS M + +L+ M AG+ + + +E+ D++
Sbjct: 47 RHPPPACKKIIRKLPIIKVTPEDLVDENNRECCICLEENNLNDRVLRLPCAHIYHSQCISDWLAKCCSCPICRYELQTNDSEYEKGRIERMKHRKPRYARYELERMKIRDLSSLCSRFNLSTNGMTEKADLICAILESGKIDVISAPKPVAHKLSDLSGMGVGKLKRAMADAGVFFDAKDVVEKEDMV 234 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig8.19352.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig8.19352.1 >prot_F-serratus_M_contig8.19352.1 ID=prot_F-serratus_M_contig8.19352.1|Name=mRNA_F-serratus_M_contig8.19352.1|organism=Fucus serratus male|type=polypeptide|length=414bp QIYSDFVRAFIPRHDQQTSRNANRGVPQTRPPDAPQNLQFTPATMEEQRRback to top mRNA from alignment at F-serratus_M_contig8:1389556..1393005- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig8.19352.1 ID=mRNA_F-serratus_M_contig8.19352.1|Name=mRNA_F-serratus_M_contig8.19352.1|organism=Fucus serratus male|type=mRNA|length=3450bp|location=Sequence derived from alignment at F-serratus_M_contig8:1389556..1393005- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig8:1389556..1393005- >mRNA_F-serratus_M_contig8.19352.1 ID=mRNA_F-serratus_M_contig8.19352.1|Name=mRNA_F-serratus_M_contig8.19352.1|organism=Fucus serratus male|type=CDS|length=2484bp|location=Sequence derived from alignment at F-serratus_M_contig8:1389556..1393005- (Fucus serratus male)back to top |