mRNA_F-serratus_M_contig8.19330.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig8.19330.1 vs. uniprot
Match: D8LRM3_ECTSI (FkbM n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM3_ECTSI) HSP 1 Score: 211 bits (537), Expect = 9.780e-65 Identity = 112/169 (66.27%), Postives = 130/169 (76.92%), Query Frame = 1
Query: 1 MSHP-KLIEDPEGLVFEYLQQDEAEFLYEEIFTRRSYLQHGLVVGKGGVVVDAGANLGLFSLQCLREAPAVQVYAFEPIPVIYDILVRNLRNWIKYDSKLG--PKPVALRVALGAEQSLQEFTFFRDSPGESTCHPEEREEQQCILRADKDAASWRKTLHLSDVPHQAQ 498
M++P KL+ED +G +FEYL QDEAEFLYEE+F RR Y QHG+ V +G VVVDAGAN+GLFSLQCLREA VQV+AFEPIPVIYD+LVRNL N K G PKPVALRVALGAEQ+ +EF FFRD+PGEST H ER EQQ L AD DAASWR+ + P +A+
Sbjct: 1 MAYPRKLLEDLQGTMFEYLHQDEAEFLYEEVFVRRCYFQHGIRVEEGAVVVDAGANIGLFSLQCLREAKGVQVFAFEPIPVIYDVLVRNLFNASSGPVKEGTCPKPVALRVALGAEQAEEEFYFFRDNPGESTRHRGERGEQQQALEADVDAASWRRVVEEGKHPDRAR 169
BLAST of mRNA_F-serratus_M_contig8.19330.1 vs. uniprot
Match: A0A7S4RML8_9DINO (Hypothetical protein (Fragment) n=2 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4RML8_9DINO) HSP 1 Score: 109 bits (272), Expect = 1.710e-23 Identity = 66/163 (40.49%), Postives = 89/163 (54.60%), Query Frame = 1
Query: 22 EDPEGLVFEYLQQDEAEFLYEEIFTRRSYLQHGLVVGKGGVVVDAGANLGLFSLQCLREAPAVQVYAFEPIPVIYDILVRNLRNWIKYDSKLG-----PKPVALRVALGAEQSLQE-----------FTFFRDSPGESTCHPEEREEQQCILRADKDAASWRK 462
E P+GL+FE++ + EAEFLYEEIFTRR Y + K ++VDAGAN+GLF+L LRE P+ Q+ FEP+P + +L RNLR G P L+VALGA F ++ +PGEST H EE Q+ +L AA ++
Sbjct: 35 ETPDGLIFEHIDEGEAEFLYEEIFTRRCYEPLVPLTSKQPLIVDAGANIGLFALWALREWPSAQILCFEPLPPVTAVLRRNLRAQAGCGGAAGRPLPPPSTSVLQVALGAGDCGASXXXXXXXXXAWFEYYPWAPGESTRHVEEAARQRTLLARAARAAGLKR 197
BLAST of mRNA_F-serratus_M_contig8.19330.1 vs. uniprot
Match: A0A370ASV3_9ACTN (FkbM family methyltransferase n=1 Tax=Streptomyces corynorhini TaxID=2282652 RepID=A0A370ASV3_9ACTN) HSP 1 Score: 95.1 bits (235), Expect = 4.740e-19 Identity = 53/127 (41.73%), Postives = 73/127 (57.48%), Query Frame = 1
Query: 31 EGLVFEYLQQDEAEFLYEEIFTRRSYLQHGLVVGKGGVVVDAGANLGLFSLQCLREAPAVQVYAFEPIPVIYDILVRNLRNWIKYDSKLGPKPVALRVALGAEQSLQ-EFTFFRDSPGESTCHPEER 408
EG +F E +F+Y EIF R+YL+HG+ + +VDAGAN+GLFSL +E P ++ AFEPIP I+ L NL DS +R ALG++ Q FTF+ PG ST +PE++
Sbjct: 21 EGALF-----SEVDFIYNEIFVERTYLKHGIQLSDSSRIVDAGANVGLFSLFMKQEFPGARILAFEPIPAIHQALTENL------DSHGAKDVEVVRSALGSQYEEQVRFTFYPSLPGNSTRYPEQK 136
BLAST of mRNA_F-serratus_M_contig8.19330.1 vs. uniprot
Match: A0A0N1NKX6_9ACTN (Methyltransferase FkbM family n=3 Tax=Actinomycetia TaxID=1760 RepID=A0A0N1NKX6_9ACTN) HSP 1 Score: 94.7 bits (234), Expect = 5.870e-19 Identity = 53/127 (41.73%), Postives = 73/127 (57.48%), Query Frame = 1
Query: 31 EGLVFEYLQQDEAEFLYEEIFTRRSYLQHGLVVGKGGVVVDAGANLGLFSLQCLREAPAVQVYAFEPIPVIYDILVRNLRNWIKYDSKLGPKPVALRVALGAEQSLQ-EFTFFRDSPGESTCHPEER 408
EG +F E +F+Y EIF R+YL+HG+ + +VDAGAN+GLFSL +E P ++ AFEPIP I+ L+ NL DS+ +R ALG Q FTF+ PG ST +PE++
Sbjct: 21 EGALF-----SEVDFIYNEIFVERAYLKHGIQLSDSSRIVDAGANVGLFSLFVKQEFPGARILAFEPIPAIHQALLENL------DSRGAKDVEVVRSALGGRHEDQVRFTFYPALPGNSTRYPEQK 136
BLAST of mRNA_F-serratus_M_contig8.19330.1 vs. uniprot
Match: A0A101SVT2_9ACTN (Methyltransf_21 domain-containing protein n=1 Tax=Streptomyces bungoensis TaxID=285568 RepID=A0A101SVT2_9ACTN) HSP 1 Score: 94.4 bits (233), Expect = 8.110e-19 Identity = 53/127 (41.73%), Postives = 72/127 (56.69%), Query Frame = 1
Query: 31 EGLVFEYLQQDEAEFLYEEIFTRRSYLQHGLVVGKGGVVVDAGANLGLFSLQCLREAPAVQVYAFEPIPVIYDILVRNLRNWIKYDSKLGPKPVALRVALGAE-QSLQEFTFFRDSPGESTCHPEER 408
EG +F E +F+Y EIF R+YL+HG+ + +VDAGAN+GLFSL RE P + AFEPIP I+ L+ NL DS +R ALG + + FTF+ PG ST +PE++
Sbjct: 21 EGALF-----SEVDFIYNEIFVERAYLKHGIRLSDSARIVDAGANVGLFSLFVKREFPGASILAFEPIPTIHQALLENL------DSHGAKDVEVVRAALGRQPEERVRFTFYPALPGNSTRYPEQK 136
BLAST of mRNA_F-serratus_M_contig8.19330.1 vs. uniprot
Match: UPI0006E3758B (FkbM family methyltransferase n=1 Tax=Streptomyces graminilatus TaxID=1464070 RepID=UPI0006E3758B) HSP 1 Score: 93.6 bits (231), Expect = 1.550e-18 Identity = 57/128 (44.53%), Postives = 76/128 (59.38%), Query Frame = 1
Query: 31 EGLVFEYLQQDEAEFLYEEIFTRRSYLQHGLVVGKGGVVVDAGANLGLFSLQCLREAPAVQVYAFEPIPVIYDILVRNLRNWIKYDSKLGPKPVAL-RVALGAEQSLQ-EFTFFRDSPGESTCHPEER 408
EG +F E +F+Y EIF R+YL+HG+ + VVDAGAN+GLFSL +E P ++ AFEPIP I+ L+ NL DS G K V + R ALG + + FTF+ PG ST +PEE+
Sbjct: 21 EGALF-----SEVDFIYNEIFVERAYLKHGIQLSDSSRVVDAGANVGLFSLFVKQEFPGAKILAFEPIPAIHRALLENL------DSH-GAKDVEVHRSALGRQHEDEVRFTFYPSLPGNSTRYPEEK 136
BLAST of mRNA_F-serratus_M_contig8.19330.1 vs. uniprot
Match: A0A1A9C7P2_9ACTN (Methyltransferase, FkbM family n=1 Tax=Streptomyces sp. DI166 TaxID=1839783 RepID=A0A1A9C7P2_9ACTN) HSP 1 Score: 92.8 bits (229), Expect = 2.950e-18 Identity = 55/133 (41.35%), Postives = 78/133 (58.65%), Query Frame = 1
Query: 16 LIEDPEGLVFEYLQQDEAEFLYEEIFTRRSYLQHGLVVGKGGVVVDAGANLGLFSLQCLREAPAVQVYAFEPIPVIYDILVRNLRNWIKYDSKLGPKPVALRVALG--AEQSLQEFTFFRDSPGESTCHPEER 408
++ EG +F E +F++ EIF R+YL+HG+ + VVDAGAN+GLFSL +E P ++ AFEPIP I+ LV NL DS +R ALG AE+ ++ FTF+ PG ST +PE++
Sbjct: 16 VVPQTEGALF-----SEVDFIHNEIFGERAYLKHGIQLSDSSRVVDAGANVGLFSLFVKQEFPGARILAFEPIPAIHRALVENL------DSHGAKDVEVVRAALGRKAEEQVR-FTFYPALPGNSTRYPEQK 136
BLAST of mRNA_F-serratus_M_contig8.19330.1 vs. uniprot
Match: UPI0016739E92 (FkbM family methyltransferase n=1 Tax=Streptomyces capitiformicae TaxID=2014920 RepID=UPI0016739E92) HSP 1 Score: 92.4 bits (228), Expect = 4.080e-18 Identity = 55/133 (41.35%), Postives = 76/133 (57.14%), Query Frame = 1
Query: 16 LIEDPEGLVFEYLQQDEAEFLYEEIFTRRSYLQHGLVVGKGGVVVDAGANLGLFSLQCLREAPAVQVYAFEPIPVIYDILVRNLRNWIKYDSKLGPKPVAL-RVALGAEQSLQ-EFTFFRDSPGESTCHPEER 408
L+ EG +F E +F+Y EIF R+YL+HG+ + VVDAGAN+GLFSL +E P ++ AFEPIP I+ L+ NL + G K V + R ALG + FTF+ PG ST +PE++
Sbjct: 16 LVPQTEGALF-----SEVDFIYNEIFFERTYLKHGITLSDSSRVVDAGANVGLFSLFVKQEFPGAKILAFEPIPAIHRALLGNL-------DEHGAKDVEVHRAALGRRHEDEVRFTFYPALPGNSTRYPEQK 136
BLAST of mRNA_F-serratus_M_contig8.19330.1 vs. uniprot
Match: UPI00196289BA (FkbM family methyltransferase n=1 Tax=Streptomyces actuosus TaxID=1885 RepID=UPI00196289BA) HSP 1 Score: 92.0 bits (227), Expect = 5.630e-18 Identity = 56/134 (41.79%), Postives = 79/134 (58.96%), Query Frame = 1
Query: 16 LIEDPEGLVFEYLQQDEAEFLYEEIFTRRSYLQHGLVVGKGGVVVDAGANLGLFSLQCLREAPAVQVYAFEPIPVIYDILVRNLRNWIKYDSKLGPKPV-ALRVALG--AEQSLQEFTFFRDSPGESTCHPEER 408
++ EG +F E +F+Y EIF R+YL+HG+ + VVDAGAN+GLFSL +E P ++ AFEPIP I+ L+ NL G K V +R ALG AE+ ++ FTF+ PG ST +PE++
Sbjct: 16 VVPQTEGALF-----SEVDFIYNEIFVERAYLRHGIQLSGSARVVDAGANVGLFSLFVKQEFPDARILAFEPIPAIHRALLENLDGH-------GAKDVEVVRAALGRQAEERVR-FTFYPAIPGNSTRYPEQK 136
BLAST of mRNA_F-serratus_M_contig8.19330.1 vs. uniprot
Match: A0A0C5VNW6_9GAMM (3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Gynuella sunshinyii YC6258 TaxID=1445510 RepID=A0A0C5VNW6_9GAMM) HSP 1 Score: 94.7 bits (234), Expect = 1.450e-17 Identity = 53/151 (35.10%), Postives = 82/151 (54.30%), Query Frame = 1
Query: 28 PEGLVFEYLQQDEAEFLYEEIFTRRSYLQHGLVVGKGGVVVDAGANLGLFSLQCLREAPAVQVYAFEPIPVIYDILVRNLRNWIKYDSKLGPKPVALRVALGAEQSLQEFTFFRDSPGESTCHPEEREEQQCILRADKDAASWRKTLHLSD 480
P GL +L E+ +LY EIF ++YL+ G+ V +G VV+D GAN+G+FSL E VQ++AFEP P YD+L +NL +I P VAL + + EF F+ S S H ++ ++ + +A ++ + R T +D
Sbjct: 401 PNGLEIAHLNSYESHYLYNEIFVEKTYLKKGITVERGEVVIDIGANIGMFSLFIASEFKEVQIFAFEPSPATYDVLNKNLALYI-------PNAVALPFGVSNQDGEAEFVFYPLSSVWSGFHADDEQDGLALRQAMENELTSRYTFDDND 544 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig8.19330.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig8.19330.1 >prot_F-serratus_M_contig8.19330.1 ID=prot_F-serratus_M_contig8.19330.1|Name=mRNA_F-serratus_M_contig8.19330.1|organism=Fucus serratus male|type=polypeptide|length=328bp MSHPKLIEDPEGLVFEYLQQDEAEFLYEEIFTRRSYLQHGLVVGKGGVVVback to top mRNA from alignment at F-serratus_M_contig8:895643..901920- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig8.19330.1 ID=mRNA_F-serratus_M_contig8.19330.1|Name=mRNA_F-serratus_M_contig8.19330.1|organism=Fucus serratus male|type=mRNA|length=6278bp|location=Sequence derived from alignment at F-serratus_M_contig8:895643..901920- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig8:895643..901920- >mRNA_F-serratus_M_contig8.19330.1 ID=mRNA_F-serratus_M_contig8.19330.1|Name=mRNA_F-serratus_M_contig8.19330.1|organism=Fucus serratus male|type=CDS|length=1968bp|location=Sequence derived from alignment at F-serratus_M_contig8:895643..901920- (Fucus serratus male)back to top |