mRNA_F-serratus_M_contig8.19284.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig8.19284.1 vs. uniprot
Match: D7FHZ6_ECTSI (Cytochrome b5 heme-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHZ6_ECTSI) HSP 1 Score: 279 bits (714), Expect = 2.770e-87 Identity = 185/428 (43.22%), Postives = 226/428 (52.80%), Query Frame = 2
Query: 38 MHVLPWTKGEHMSPCSCLEHKAASGR----RIDRCLSLPSPTELS--ELKRAHSPISTVEPDSSSVAG---GASCRFTR-RGCSEKNLEALKLEDSRDMTPQAQAHSAFLGSFENRGISASWKLPG--------------------------------------ESVVPNTVVSPTPPGDLQKQE-SLSNSGEGGDCKSKGLG---ESACSIVPLEDAAQRIAVDPVSGQLFFVERTTVCDACPCCEDVCEVDWCNNCDDRRAQLEEAYGPLMVSLSELQGGS-----------VGTLKGRERIRRISSRNRLMAPVLSRRYPRKSTYTLCEVRRRKITGACWVMCKGVVYDVTAALENHPGGKRSILRNAGGRDCIEDFLFHSKEARKHWRRYKIGNLVACS-GENVESSDEIDGERFSRAGSDCLI 1129
MHV SPC+CL ++GR R DR +SLPSP ELS E++ AH+PI S G G R R R S LK + RD+ QA A SA GS + + S + G + N + P P ++ S S G G +G G +A ++ LEDAAQRIAVDP SG +FVER+TVCDACP CED CEV WCN CD+ R LEEAYG LM+S +E+ G G G SR +L APVLSRRYPRKS+YTLCEVRRRK+TGACWV+ +G VYDVTAAL +HPGGKRS+L+NAGGRDC EDF FHS+ A+K WR+Y+IG+LVAC G+ ER R S C+I
Sbjct: 3 MHVPSPVDAGEPSPCACLIRPPSAGRQDKDRHDRRMSLPSPAELSVIEIEDAHTPIPLGGFPGGSPTGEVIGTPGRPHRERNHSGGGFVTLKRKGVRDVVRQAHARSASAGSVGGKP-AGSCRTCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXNCGYDERDHVHDLEANEPLGPPSPMPFRRPSGSGSVGGRGSXXXRRGSGTPGSAAAAVASLEDAAQRIAVDPDSGHSYFVERSTVCDACPYCEDTCEVAWCNGCDETRMHLEEAYGKLMLSAAEVAGAGGRHXXXXXXCETGADNGG------GSRLKL-APVLSRRYPRKSSYTLCEVRRRKVTGACWVVSQGSVYDVTAALPDHPGGKRSVLKNAGGRDCAEDFFFHSRAAKKQWRQYRIGSLVACRPGQGDGDGGAAGDERSMRIASSCVI 422
BLAST of mRNA_F-serratus_M_contig8.19284.1 vs. uniprot
Match: A0A7S3LGK6_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LGK6_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 4.850e-20 Identity = 53/155 (34.19%), Postives = 71/155 (45.81%), Query Frame = 2
Query: 599 CDACPCCEDVCEVDWCNNCDDRRAQLEEAYGPLMVSLSELQGGSVGTLKGRERIRRISSRNRLMAPVLSRRYPRKSTYTLCEVRRRKITGACWVMCKGVVYDVTAALENHPGGKRSILRNAGG-RDCIEDFLFHSKEARKHWRRYKIGNLVACSG 1060
C+ACP C D C D C C ++ L +S P R +TLC+VR+ + W++ +YDVTA ++ HPGG+ ILR AGG RDC +DF FHSK R+ W +YK+G LV C G
Sbjct: 49 CEACPYCSDTCGDDSCKLCVNKTC--------LEIS----------------------------TPTCPPRSASLPVFTLCQVRKHCTEKSVWIVAGKDIYDVTAYIDRHPGGRECILRKAGGARDCTDDFQFHSKAGRRGWNKYKVGVLVPCPG 167
BLAST of mRNA_F-serratus_M_contig8.19284.1 vs. uniprot
Match: A0A2D4CBX4_PYTIN (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CBX4_PYTIN) HSP 1 Score: 85.9 bits (211), Expect = 2.290e-14 Identity = 55/158 (34.81%), Postives = 78/158 (49.37%), Query Frame = 2
Query: 599 CDACPCCEDVCEVDWCNNCDDRRAQLEEAYGPLMVSLSELQGGSVGTLKGRERIRRISSRNRLMAP-----VLSRRYPRKSTYTLCEVRRRKITGACWVMCKGVVYDVTAALENHPGGKRSILRNA-GGRDCIEDFLFHSKEARKHWRRYKIGNLVAC 1054
CDAC CC DVCE D C C ++ QL A+ S ++ RER S+ ++ AP V S + Y+ CE+RR + +CWV+ G+VYDVT L H GG +++L A G+DC + H EAR+ Y++G C
Sbjct: 1175 CDACICCNDVCENDGCFFCAEKEYQLRLAFA------------SSSSVLRRER---SSATSKPSAPGAASSVASSYFNVDRKYSSCELRRHQHQRSCWVLVDGLVYDVTDLLGVHSGGMQALLDAARSGKDCGDLMRQHPPEARRMLAAYRLGEFYVC 1317
BLAST of mRNA_F-serratus_M_contig8.19284.1 vs. uniprot
Match: B4LMG8_DROVI (Cytochrome b5 heme-binding domain-containing protein n=10 Tax=Drosophila TaxID=7215 RepID=B4LMG8_DROVI) HSP 1 Score: 68.9 bits (167), Expect = 1.370e-10 Identity = 35/90 (38.89%), Postives = 50/90 (55.56%), Query Frame = 2
Query: 821 KSTYTLCEVRRRKITGACWVMCKGVVYDVTAALENHPGGKRSILRNAGGRDCIEDF--LFHSKEARKHWRRYKIGNLVACSGENVESSDE 1084
+ T+T EV + W++ VYDVTA L HPGG+ ++ AG +D E+F + HS +AR+ ++YKIG LVA NV E
Sbjct: 6 EKTFTRAEVAKHNTNKDTWLLIHNNVYDVTAFLNEHPGGEEVLIEQAG-KDATENFEDVGHSNDAREMMKKYKIGELVASERTNVAQKSE 94
BLAST of mRNA_F-serratus_M_contig8.19284.1 vs. uniprot
Match: A0A0D2WRW4_CAPO3 (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WRW4_CAPO3) HSP 1 Score: 72.4 bits (176), Expect = 2.200e-10 Identity = 34/74 (45.95%), Postives = 48/74 (64.86%), Query Frame = 2
Query: 830 YTLCEVRRRKITGACWVMCKGVVYDVTAALENHPGGKRSILRNAGGRDCIEDFLFHSKEARKHWRRYKIGNLVA 1051
YT +V + +CW++ +GVVYDVT L+ HP G +ILR+AG +D DF FH ++K W++Y IG LVA
Sbjct: 282 YTRDQVAQHNSRESCWLVVRGVVYDVTDFLKFHPAGANAILRHAG-QDATVDFDFHDGHSQKLWKKYIIGKLVA 354
BLAST of mRNA_F-serratus_M_contig8.19284.1 vs. uniprot
Match: A0A6A5BJU8_NAEFO (Uncharacterized protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5BJU8_NAEFO) HSP 1 Score: 72.4 bits (176), Expect = 3.050e-10 Identity = 35/92 (38.04%), Postives = 52/92 (56.52%), Query Frame = 2
Query: 872 CWVMCKGVVYDVTAALENHPGGKRSILRNAGGRDCIEDF--LFHSKEARKHWRRYKIGNLVACSGENVESSDEIDGERFSRAGSDCLIM*GF 1141
CW++C G+VYDVT L HPGG +++NAG +DC DF +FHS +AR ++Y IG L+ +++ SS + + I GF
Sbjct: 37 CWMICHGLVYDVTTYLNEHPGGVNLMMKNAG-KDCTSDFEAMFHSPKARNILKKYLIGELLTEKNQSLGSSTTQRRSHLTNFANTNQIKTGF 127
BLAST of mRNA_F-serratus_M_contig8.19284.1 vs. uniprot
Match: B4KSK1_DROMO (Cytochrome b5 heme-binding domain-containing protein n=5 Tax=Drosophila TaxID=7215 RepID=B4KSK1_DROMO) HSP 1 Score: 67.4 bits (163), Expect = 4.790e-10 Identity = 35/90 (38.89%), Postives = 48/90 (53.33%), Query Frame = 2
Query: 821 KSTYTLCEVRRRKITGACWVMCKGVVYDVTAALENHPGGKRSILRNAGGRDCIEDF--LFHSKEARKHWRRYKIGNLVACSGENVESSDE 1084
+ TYT EV + W++ VYDVTA L HPGG+ ++ AG +D E+F + HS +AR ++YKIG LVA V E
Sbjct: 6 EKTYTRAEVAKHNTNKDTWLLIHNTVYDVTAFLNEHPGGEEVLIEQAG-KDATENFEDVGHSHDARDMMKKYKIGELVAHERTKVAQKSE 94
BLAST of mRNA_F-serratus_M_contig8.19284.1 vs. uniprot
Match: UPI00143F45FA (cytochrome b5-like n=1 Tax=Drosophila miranda TaxID=7229 RepID=UPI00143F45FA) HSP 1 Score: 67.0 bits (162), Expect = 6.550e-10 Identity = 33/90 (36.67%), Postives = 49/90 (54.44%), Query Frame = 2
Query: 821 KSTYTLCEVRRRKITGACWVMCKGVVYDVTAALENHPGGKRSILRNAGGRDCIEDF--LFHSKEARKHWRRYKIGNLVACSGENVESSDE 1084
K ++T +V + W++ VYDVTA L HPGG+ ++ AG +D E+F + HS +AR+ +YKIG LV C +V E
Sbjct: 6 KKSFTRADVAKHNTNKDTWLLIHNSVYDVTAFLNEHPGGEEVLIEQAG-KDATENFEDVGHSNDAREMMTKYKIGELVECERTSVAQKSE 94
BLAST of mRNA_F-serratus_M_contig8.19284.1 vs. uniprot
Match: D0EP49_AGATN (Nitrate reductase n=1 Tax=Agarophyton tenuistipitatum TaxID=2510778 RepID=D0EP49_AGATN) HSP 1 Score: 71.6 bits (174), Expect = 8.800e-10 Identity = 41/91 (45.05%), Postives = 55/91 (60.44%), Query Frame = 2
Query: 794 PVLSRRYPRKST----YTLCEVRRRKITGACWVMCKGVVYDVTAALENHPGGKRSILRNAGGRDCIEDFL-FHSKEARKHWRRYKIGNLVA 1051
PV S P ST +T+ +V ++ + W++ +G VYD T LE+HPGGK SIL NAG +D E+FL HS +A+K Y IG LVA
Sbjct: 518 PVKSGSAPSLSTMIKSFTMKDVEKQNSEDSAWIVVEGKVYDATPYLEDHPGGKASILMNAG-QDATEEFLAIHSDKAKKMLEDYYIGELVA 607
BLAST of mRNA_F-serratus_M_contig8.19284.1 vs. uniprot
Match: A0A058Z979_FONAL (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Fonticula alba TaxID=691883 RepID=A0A058Z979_FONAL) HSP 1 Score: 65.5 bits (158), Expect = 9.460e-10 Identity = 36/77 (46.75%), Postives = 47/77 (61.04%), Query Frame = 2
Query: 815 PRKSTYTLCEVRRRKITGACWVMCKGVVYDVTAALENHPGGKRSILRNAGGRDCIEDFLF--HSKEARKHWRRYKIG 1039
PR +TY+ E+ CW++ +G VYDVTA L +HPGG R ILR+AG RD E FL HS A+ R++ IG
Sbjct: 17 PRFATYSREEIAMHNSADDCWIIIEGRVYDVTAFLNDHPGGARIILRHAG-RDATEAFLDIGHSARAQVLLRKFLIG 92 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig8.19284.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig8.19284.1 >prot_F-serratus_M_contig8.19284.1 ID=prot_F-serratus_M_contig8.19284.1|Name=mRNA_F-serratus_M_contig8.19284.1|organism=Fucus serratus male|type=polypeptide|length=366bp MHVLPWTKGEHMSPCSCLEHKAASGRRIDRCLSLPSPTELSELKRAHSPIback to top mRNA from alignment at F-serratus_M_contig8:135195..143681- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig8.19284.1 ID=mRNA_F-serratus_M_contig8.19284.1|Name=mRNA_F-serratus_M_contig8.19284.1|organism=Fucus serratus male|type=mRNA|length=8487bp|location=Sequence derived from alignment at F-serratus_M_contig8:135195..143681- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig8:135195..143681- >mRNA_F-serratus_M_contig8.19284.1 ID=mRNA_F-serratus_M_contig8.19284.1|Name=mRNA_F-serratus_M_contig8.19284.1|organism=Fucus serratus male|type=CDS|length=2196bp|location=Sequence derived from alignment at F-serratus_M_contig8:135195..143681- (Fucus serratus male)back to top |