mRNA_F-serratus_M_contig7990.19279.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig7990.19279.1
Unique NamemRNA_F-serratus_M_contig7990.19279.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig7990.19279.1 vs. uniprot
Match: D7FSN6_ECTSI (Calcium-transporting ATPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSN6_ECTSI)

HSP 1 Score: 307 bits (786), Expect = 7.730e-95
Identity = 170/221 (76.92%), Postives = 184/221 (83.26%), Query Frame = 1 
Query:    1 ADIGVAMGKAGTDVAKEAADMVLTDDDIATITAAIEEGKGIFYNIKNFLTFQLSTAVALVDRCS-ATFADSNVPLNPMQILWINIIMDGPPAQSLGVEPVHGAIVKKPPRKPGAPVISTRLMFRVSTSGALIVFGTLCVFCLAMINQ--LSRSAVLTPRVTTMTFTTFVMFDMFNALCCRSADKIVLKMDMFANKAFLYSVGLSLLGQMLVIYVPWLQRIF 654
            ADIGVAMG +G+DVAKEAADM+L DDDIATITAAIEEGK IFYNIKNFLTFQLSTA+A +   + AT      P+N MQILWINIIMDGPPAQSLGVEPVHGAIVK+PPRK G PVISTRLM+RV TSG LIV GTL VF L M     LSRS   T R  TMTFTTFVMFDMFNALCCRSADKIV +MDMFANKAF+YS G SL+GQMLV+YVPWLQ+IF
Sbjct:  671 ADIGVAMGISGSDVAKEAADMILMDDDIATITAAIEEGKAIFYNIKNFLTFQLSTALAALSIVAIATCMGFKCPINAMQILWINIIMDGPPAQSLGVEPVHGAIVKRPPRKAGDPVISTRLMWRVVTSGCLIVVGTLWVFSLGMTQNGVLSRSMEPTRRDRTMTFTTFVMFDMFNALCCRSADKIVPQMDMFANKAFIYSAGGSLVGQMLVVYVPWLQQIF 891
[Close]
BLAST of mRNA_F-serratus_M_contig7990.19279.1 vs. uniprot
Match: A0A836CGC1_9STRA (Calcium-transporting ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGC1_9STRA)

HSP 1 Score: 259 bits (661), Expect = 4.340e-77
Identity = 140/226 (61.95%), Postives = 170/226 (75.22%), Query Frame = 1 
Query:    1 ADIGVAMGKAGTDVAKEAADMVLTDDDIATITAAIEEGKGIFYNIKNFLTFQLSTAVALVDRCS-ATFADSNVPLNPMQILWINIIMDGPPAQSLGVEPVHGAIVKKPPRKPGAPVISTRLMFRVSTSGALIVFGTLCVFCLAMINQLSRSAVLTPRVTTMTFTTFVMFDMFNALCCRSADKIVLKMDMFANKAFLYSVGLSLLGQMLVIYVPWLQRIFSNGSSIP 675
            ADIGVAMG++GTDVAKEAADM+L DDD ATI AA+EEGKGIFYNIKNFL FQLST+VA +   + +TF+    PLN MQILWINIIMDGPPAQSLGVEPV   ++ +PPR+P  P+I+  L+ RV +S  LIV GTL VF   +++       +T R TTMTFTTFV FDM NA CCRSADK VL+M + AN+ F Y+VG S+LGQ+ VIY+P LQR+F   +  P
Sbjct:  653 ADIGVAMGRSGTDVAKEAADMILMDDDFATIVAAVEEGKGIFYNIKNFLAFQLSTSVAALGLVALSTFSGLPSPLNAMQILWINIIMDGPPAQSLGVEPVQSTVISRPPRRPDDPIINRALLLRVLSSATLIVLGTLFVFHRELVD-----GAVTSRDTTMTFTTFVAFDMVNAYCCRSADKTVLQMPLLANRPFAYAVGGSILGQLAVIYLPPLQRVFQTEALSP 873
[Close]
BLAST of mRNA_F-serratus_M_contig7990.19279.1 vs. uniprot
Match: A0A7S4D789_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D789_HETAK)

HSP 1 Score: 246 bits (628), Expect = 2.150e-76
Identity = 137/219 (62.56%), Postives = 162/219 (73.97%), Query Frame = 1 
Query:    1 ADIGVAMGKAGTDVAKEAADMVLTDDDIATITAAIEEGKGIFYNIKNFLTFQLSTAVALVDRCS-ATFADSNVPLNPMQILWINIIMDGPPAQSLGVEPVHGAIVKKPPRKPGAPVISTRLMFRVSTSGALIVFGTLCVFCLAMINQLSRSAVLTPRVTTMTFTTFVMFDMFNALCCRSADKIVLKMDMFANKAFLYSVGLSLLGQMLVIYVPWLQRIF 654
            ADIGVAMG+ GTDVAKEAAD+VL DDD+ T+  A+EEGK IFYNIKNFLTFQLST+VA +   + +T      PLN MQILWINIIMDGPPAQSLGVEPV  A+  KPPR+PG  +I+  ++ RV +SG LIV GTL VF      +      +T R TTMTFT FV+FDM NALCCRSA   V K+D+F NKAF+++VG SL+GQ LVIY P LQ IF
Sbjct:  130 ADIGVAMGRGGTDVAKEAADVVLLDDDLGTMVHAVEEGKSIFYNIKNFLTFQLSTSVAALSLIALSTVLGLPSPLNAMQILWINIIMDGPPAQSLGVEPVDPAVTSKPPRRPGEGIINKDMLLRVFSSGLLIVLGTLWVF-----RREMEDGAVTRRDTTMTFTCFVLFDMANALCCRSASLPVYKLDLFGNKAFIFAVGGSLVGQALVIYFPPLQGIF 343
[Close]
BLAST of mRNA_F-serratus_M_contig7990.19279.1 vs. uniprot
Match: A0A293M4Z6_ORNER (Calcium-transporting ATPase type 2C member 1 (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293M4Z6_ORNER)

HSP 1 Score: 236 bits (602), Expect = 8.670e-73
Identity = 131/219 (59.82%), Postives = 158/219 (72.15%), Query Frame = 1 
Query:    1 ADIGVAMGKAGTDVAKEAADMVLTDDDIATITAAIEEGKGIFYNIKNFLTFQLSTAVALVDRCS-ATFADSNVPLNPMQILWINIIMDGPPAQSLGVEPVHGAIVKKPPRKPGAPVISTRLMFRVSTSGALIVFGTLCVFCLAMINQLSRSAVLTPRVTTMTFTTFVMFDMFNALCCRSADKIVLKMDMFANKAFLYSVGLSLLGQMLVIYVPWLQRIF 654
            ADIG+AMGK GTDV KEAADM+L DDD  TI AAIEEGKGIFYNI+NF+ FQLST++A +   + +T      PLN MQILWINIIMDGPPAQSLGVEPV   ++K+PPR    P+I+  L+F V  S  +I+ GTL +F   M ++     V+TPR TTMTFT FV FDMFNAL CRS  K    + +F NK FL +VG S++GQMLVIY P LQR+F
Sbjct:  139 ADIGIAMGKIGTDVCKEAADMILVDDDFFTIMAAIEEGKGIFYNIRNFVMFQLSTSIAALSLIALSTMMKIPNPLNAMQILWINIIMDGPPAQSLGVEPVDHDVLKQPPRNTKQPMITRDLIFNVCLSSLIIIVGTLFIFRKEMSDE-----VVTPRDTTMTFTCFVFFDMFNALSCRSQTKSAFTVGLFTNKMFLLAVGFSVVGQMLVIYFPPLQRVF 352
[Close]
BLAST of mRNA_F-serratus_M_contig7990.19279.1 vs. uniprot
Match: A0A6M2D6F3_RHIMP (Putative plasma membrane calcium transporting atp (Fragment) n=1 Tax=Rhipicephalus microplus TaxID=6941 RepID=A0A6M2D6F3_RHIMP)

HSP 1 Score: 236 bits (603), Expect = 2.560e-72
Identity = 130/219 (59.36%), Postives = 159/219 (72.60%), Query Frame = 1 
Query:    1 ADIGVAMGKAGTDVAKEAADMVLTDDDIATITAAIEEGKGIFYNIKNFLTFQLSTAVALVDRCS-ATFADSNVPLNPMQILWINIIMDGPPAQSLGVEPVHGAIVKKPPRKPGAPVISTRLMFRVSTSGALIVFGTLCVFCLAMINQLSRSAVLTPRVTTMTFTTFVMFDMFNALCCRSADKIVLKMDMFANKAFLYSVGLSLLGQMLVIYVPWLQRIF 654
            ADIG+AMGK GTDV KEAADM+L DDD  TI AAIEEGKGIFYNI+NF+TFQLST++A +   + +T      PLN MQILWINIIMDGPPAQSLGVEPV   ++K+PPR    P+I+  L+F V  S  +I+ GTL +F   M +Q     ++TPR TTMTFT FV FDMFNAL CRS  K    + +F+N+ FL +V  S++GQMLVIY P LQR+F
Sbjct:  192 ADIGIAMGKIGTDVCKEAADMILVDDDFFTIMAAIEEGKGIFYNIRNFVTFQLSTSIAALSLIALSTLMKIPNPLNAMQILWINIIMDGPPAQSLGVEPVDHDVLKQPPRNTKQPMITRDLIFNVVLSSLIIILGTLFIFRKEMSDQ-----IVTPRDTTMTFTCFVFFDMFNALSCRSQTKSAFTIGLFSNRMFLLAVAFSVIGQMLVIYFPPLQRVF 405
[Close]
BLAST of mRNA_F-serratus_M_contig7990.19279.1 vs. uniprot
Match: UPI00193A2763 (calcium-transporting ATPase type 2C member 1-like isoform X1 n=4 Tax=Styela clava TaxID=7725 RepID=UPI00193A2763)

HSP 1 Score: 245 bits (625), Expect = 1.490e-71
Identity = 136/219 (62.10%), Postives = 160/219 (73.06%), Query Frame = 1 
Query:    1 ADIGVAMGKAGTDVAKEAADMVLTDDDIATITAAIEEGKGIFYNIKNFLTFQLSTAVALVDRCS-ATFADSNVPLNPMQILWINIIMDGPPAQSLGVEPVHGAIVKKPPRKPGAPVISTRLMFRVSTSGALIVFGTLCVFCLAMINQLSRSAVLTPRVTTMTFTTFVMFDMFNALCCRSADKIVLKMDMFANKAFLYSVGLSLLGQMLVIYVPWLQRIF 654
            AD+G+AMG  GTDV KEAADM+L DDD+ TI +AIEEGKGIFYNIKNF+TFQLST++A +   + AT      PLN MQILWINIIMDGPPAQSLGVEPV   ++++PPRK   P++S  L+ RV  S  LIV GTL VF L M     R   +TPR TTMTFT FV FDMFNAL CRS  K + K+  F N+ FL++VG SLLGQMLVIY P LQ +F
Sbjct:  714 ADVGIAMGTTGTDVCKEAADMILVDDDLTTILSAIEEGKGIFYNIKNFVTFQLSTSIAALSLIALATAFRLPNPLNAMQILWINIIMDGPPAQSLGVEPVDPDVIRQPPRKMSDPILSKGLIGRVLLSATLIVAGTLAVFWLEM-----RDNEITPRDTTMTFTCFVFFDMFNALSCRSQKKSIFKIGFFTNRVFLFAVGASLLGQMLVIYFPPLQAVF 927
[Close]
BLAST of mRNA_F-serratus_M_contig7990.19279.1 vs. uniprot
Match: A0A433PCX6_9FUNG (Calcium-transporting ATPase n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PCX6_9FUNG)

HSP 1 Score: 240 bits (613), Expect = 8.120e-71
Identity = 128/220 (58.18%), Postives = 166/220 (75.45%), Query Frame = 1 
Query:    1 ADIGVAMGKAGTDVAKEAADMVLTDDDIATITAAIEEGKGIFYNIKNFLTFQLSTAVALVD--RCSATFADSNVPLNPMQILWINIIMDGPPAQSLGVEPVHGAIVKKPPRKPGAPVISTRLMFRVSTSGALIVFGTLCVFCLAMINQLSRSAVLTPRVTTMTFTTFVMFDMFNALCCRSADKIVLKMDMFANKAFLYSVGLSLLGQMLVIYVPWLQRIF 654
            ADIG++MGK+GTDV+KEAADM+L DDD++TI +AIEEGK IFYNI+NFLTFQLST+V+ +     S  F   N PLN MQILWINI+MDGPPAQSLGVEPV   +++KPPR    P+++  L+ RV T+ A+IV GT+ ++   M        ++TPR TTMTFTTFV FDMFNAL CRS  K V ++ +F+N+ F ++V  S++GQMLVIYVP+LQ +F
Sbjct:  516 ADIGISMGKSGTDVSKEAADMILVDDDLSTILSAIEEGKSIFYNIQNFLTFQLSTSVSALTLIALSTVFGFDN-PLNAMQILWINILMDGPPAQSLGVEPVDHDVMRKPPRPKNKPILTRNLVVRVLTAAAIIVIGTMFIYVSEM-----HDGLVTPRDTTMTFTTFVFFDMFNALACRSEKKSVFELGLFSNQMFNFAVSGSIIGQMLVIYVPFLQNVF 729
[Close]
BLAST of mRNA_F-serratus_M_contig7990.19279.1 vs. uniprot
Match: A0A1B7T9K1_9ASCO (Cation_ATPase_C domain-containing protein n=1 Tax=Hanseniaspora valbyensis NRRL Y-1626 TaxID=766949 RepID=A0A1B7T9K1_9ASCO)

HSP 1 Score: 228 bits (582), Expect = 8.850e-71
Identity = 126/220 (57.27%), Postives = 156/220 (70.91%), Query Frame = 1 
Query:    1 ADIGVAMGKAGTDVAKEAADMVLTDDDIATITAAIEEGKGIFYNIKNFLTFQLSTAVALVDRCS-ATFADSNVPLNPMQILWINIIMDGPPAQSLGVEPVHGAIVKKPPRKPGAPVISTRLMFRVSTSGALIVFGTLCVFCLAMINQLSRSAVLTPRVTTMTFTTFVMFDMFNALCCRSADKIVLKMDMFANKAFLYSVGLSLLGQMLVIYVPWLQRIFS 657
            ADIG++MGK GTDVAKEA+DMVL DDD +TI +AIEEGKGIF NI+NF+TFQLST+VA +     +T  +   PLN MQILWINI+MDGPPAQSLGVEPV   ++KKPPRK    +++ +L  RV  S   I+ GTL +F   M++       +T R TTMTFT FV FDMFNA+ CR   K V ++  F NK F YSVG SL+GQM  IY+P+ Q IF+
Sbjct:   63 ADIGISMGKNGTDVAKEASDMVLVDDDFSTILSAIEEGKGIFNNIQNFITFQLSTSVAALSLVLLSTMFNLPTPLNAMQILWINILMDGPPAQSLGVEPVGHEVMKKPPRKRDEKILTAKLFKRVFQSAGCIIIGTLFIFIKEMVD-----GEITKRDTTMTFTCFVFFDMFNAMACRHTTKSVFEIGFFTNKMFNYSVGFSLVGQMCAIYLPFAQSIFN 277
[Close]
BLAST of mRNA_F-serratus_M_contig7990.19279.1 vs. uniprot
Match: I2H0D8_TETBL (Calcium-transporting ATPase n=1 Tax=Tetrapisispora blattae (strain ATCC 34711 / CBS 6284 / DSM 70876 / NBRC 10599 / NRRL Y-10934 / UCD 77-7) TaxID=1071380 RepID=I2H0D8_TETBL)

HSP 1 Score: 241 bits (616), Expect = 2.150e-70
Identity = 131/223 (58.74%), Postives = 163/223 (73.09%), Query Frame = 1 
Query:    1 ADIGVAMGKAGTDVAKEAADMVLTDDDIATITAAIEEGKGIFYNIKNFLTFQLSTAVALVDRCS-ATFADSNVPLNPMQILWINIIMDGPPAQSLGVEPVHGAIVKKPPRKPGAPVISTRLMFRVSTSGALIVFGTLCVFCLAMINQLSRSAVLTPRVTTMTFTTFVMFDMFNALCCRSADKIVLKMDMFANKAFLYSVGLSLLGQMLVIYVPWLQRIFSNGS 666
            ADIGVAMGK GTDVAKEA+DMVLTDDD +TI  AIEEGKGIF NI+NF+TFQLST++A +   + +T      PLN MQILWINI+MDGPPAQSLGVEPV   +++KPPR     +++T ++ R+  + + I+FGT+ VF    + +++    +T R TTMTFT FV FDMFNAL CR A K +LK+  F NK F Y+VGLSLLGQM  IYVP+ QRIF   S
Sbjct:  689 ADIGVAMGKMGTDVAKEASDMVLTDDDFSTILTAIEEGKGIFNNIQNFITFQLSTSIAALSLIALSTALKLPNPLNAMQILWINILMDGPPAQSLGVEPVDHEVMRKPPRNRSDKILTTEVLKRLLMTASCIIFGTVYVF----VKEMTEDGQVTARDTTMTFTCFVFFDMFNALACRHASKSILKIGFFTNKMFNYAVGLSLLGQMCAIYVPFFQRIFKTES 907
[Close]
BLAST of mRNA_F-serratus_M_contig7990.19279.1 vs. uniprot
Match: V5H1L5_IXORI (Calcium-transporting ATPase n=3 Tax=Ixodidae TaxID=6939 RepID=V5H1L5_IXORI)

HSP 1 Score: 235 bits (600), Expect = 6.600e-70
Identity = 131/219 (59.82%), Postives = 158/219 (72.15%), Query Frame = 1 
Query:    1 ADIGVAMGKAGTDVAKEAADMVLTDDDIATITAAIEEGKGIFYNIKNFLTFQLSTAVALVDRCS-ATFADSNVPLNPMQILWINIIMDGPPAQSLGVEPVHGAIVKKPPRKPGAPVISTRLMFRVSTSGALIVFGTLCVFCLAMINQLSRSAVLTPRVTTMTFTTFVMFDMFNALCCRSADKIVLKMDMFANKAFLYSVGLSLLGQMLVIYVPWLQRIF 654
            ADIG+AMGK GTDV KEAADM+L DDD  TI AAIEEGKGIFYNI+NF+ FQLST++A +   + +T      PLN MQILWINIIMDGPPAQSLGVEPV   ++K+PPR    P+I+  L+F V  S  +I+ GTL +F   M +Q+     +TPR TTMTFT FV FDMFNAL CRS  K V  +  F+NK FL +V  S++GQMLVIY P LQR+F
Sbjct:  393 ADIGIAMGKIGTDVCKEAADMILVDDDFFTIMAAIEEGKGIFYNIRNFVMFQLSTSIAALSLIALSTLMKIPNPLNAMQILWINIIMDGPPAQSLGVEPVDHDVLKQPPRNTKQPMITRDLIFNVVLSSLIIILGTLFIFRNEMSDQM-----VTPRDTTMTFTCFVFFDMFNALSCRSQTKSVFTIGFFSNKMFLLAVAFSVIGQMLVIYFPPLQRVF 606
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig7990.19279.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSN6_ECTSI7.730e-9576.92Calcium-transporting ATPase n=1 Tax=Ectocarpus sil... [more]
A0A836CGC1_9STRA4.340e-7761.95Calcium-transporting ATPase n=1 Tax=Tribonema minu... [more]
A0A7S4D789_HETAK2.150e-7662.56Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A293M4Z6_ORNER8.670e-7359.82Calcium-transporting ATPase type 2C member 1 (Frag... [more]
A0A6M2D6F3_RHIMP2.560e-7259.36Putative plasma membrane calcium transporting atp ... [more]
UPI00193A27631.490e-7162.10calcium-transporting ATPase type 2C member 1-like ... [more]
A0A433PCX6_9FUNG8.120e-7158.18Calcium-transporting ATPase n=1 Tax=Endogone sp. F... [more]
A0A1B7T9K1_9ASCO8.850e-7157.27Cation_ATPase_C domain-containing protein n=1 Tax=... [more]
I2H0D8_TETBL2.150e-7058.74Calcium-transporting ATPase n=1 Tax=Tetrapisispora... [more]
V5H1L5_IXORI6.600e-7059.82Calcium-transporting ATPase n=3 Tax=Ixodidae TaxID... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig7990contigF-serratus_M_contig7990:9361..11346 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score300.1
Seed ortholog evalue9.2e-79
Seed eggNOG ortholog2880.D7FSN6
Preferred nameATP2C2
KEGG koko:K01537,ko:K20291
KEGG TC3.A.3.2
Hectar predicted targeting categoryother localisation
GOsGO:0000041,GO:0000139,GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005384,GO:0005388,GO:0005488,GO:0005509,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005783,GO:0005789,GO:0005794,GO:0005802,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006828,GO:0006873,GO:0006874,GO:0006875,GO:0006914,GO:0006950,GO:0006979,GO:0006996,GO:0007010,GO:0007154,GO:0007155,GO:0007165,GO:0007204,GO:0007275,GO:0008104,GO:0008144,GO:0008150,GO:0008152,GO:0008324,GO:0008544,GO:0009056,GO:0009888,GO:0009898,GO:0009966,GO:0009967,GO:0009987,GO:0010035,GO:0010038,GO:0010042,GO:0010646,GO:0010647,GO:0010959,GO:0012505,GO:0015075,GO:0015085,GO:0015318,GO:0015399,GO:0015405,GO:0015410,GO:0015662,GO:0016020,GO:0016021,GO:0016043,GO:0016236,GO:0016339,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019722,GO:0019725,GO:0019829,GO:0019932,GO:0022610,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0023051,GO:0023052,GO:0023056,GO:0030001,GO:0030003,GO:0030026,GO:0030029,GO:0030036,GO:0030133,GO:0030141,GO:0030145,GO:0030334,GO:0030554,GO:0030879,GO:0031090,GO:0031224,GO:0031410,GO:0031532,GO:0031982,GO:0031984,GO:0032468,GO:0032472,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032879,GO:0033036,GO:0034220,GO:0034613,GO:0035556,GO:0035639,GO:0036094,GO:0040012,GO:0042044,GO:0042175,GO:0042221,GO:0042579,GO:0042592,GO:0042623,GO:0042625,GO:0042626,GO:0043122,GO:0043123,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043269,GO:0043270,GO:0043492,GO:0044237,GO:0044248,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0046872,GO:0046873,GO:0046914,GO:0046915,GO:0046916,GO:0048471,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048731,GO:0048732,GO:0048856,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050896,GO:0051049,GO:0051050,GO:0051179,GO:0051208,GO:0051209,GO:0051234,GO:0051235,GO:0051270,GO:0051282,GO:0051283,GO:0051480,GO:0051592,GO:0051641,GO:0051649,GO:0051716,GO:0051924,GO:0051928,GO:0055065,GO:0055071,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055085,GO:0060401,GO:0060402,GO:0060429,GO:0061180,GO:0061454,GO:0061856,GO:0061919,GO:0065007,GO:0065008,GO:0070509,GO:0070588,GO:0070727,GO:0070838,GO:0071421,GO:0071840,GO:0071944,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0090279,GO:0090280,GO:0090662,GO:0097159,GO:0097367,GO:0097553,GO:0097708,GO:0098552,GO:0098562,GO:0098588,GO:0098609,GO:0098655,GO:0098660,GO:0098662,GO:0098742,GO:0098771,GO:0098791,GO:0098827,GO:0099131,GO:0099132,GO:0099503,GO:1901265,GO:1901363,GO:1902531,GO:1902533,GO:1990778,GO:2000145
EggNOG free text desc.calcium-transporting ATPase activity
EggNOG OGsCOG0474@1,KOG0202@2759
Ec32 ortholog descriptiontestis secretory pathway calcium transporting ATPase
Ec32 orthologEc-07_002540.2
EC3.6.3.8
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko04131
Exons5
Model size739
Cds size693
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932368.5883474-UTR-F-serratus_M_contig7990:9360..93881622932368.5883474-UTR-F-serratus_M_contig7990:9360..9388Fucus serratus maleUTRF-serratus_M_contig7990 9361..9388 -
1690964274.5558407-UTR-F-serratus_M_contig7990:9360..93881690964274.5558407-UTR-F-serratus_M_contig7990:9360..9388Fucus serratus maleUTRF-serratus_M_contig7990 9361..9388 -
1622932368.682031-UTR-F-serratus_M_contig7990:11328..113461622932368.682031-UTR-F-serratus_M_contig7990:11328..11346Fucus serratus maleUTRF-serratus_M_contig7990 11329..11346 -
1690964274.6187732-UTR-F-serratus_M_contig7990:11328..113461690964274.6187732-UTR-F-serratus_M_contig7990:11328..11346Fucus serratus maleUTRF-serratus_M_contig7990 11329..11346 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932368.6014485-CDS-F-serratus_M_contig7990:9388..94841622932368.6014485-CDS-F-serratus_M_contig7990:9388..9484Fucus serratus maleCDSF-serratus_M_contig7990 9389..9484 -
1690964274.569172-CDS-F-serratus_M_contig7990:9388..94841690964274.569172-CDS-F-serratus_M_contig7990:9388..9484Fucus serratus maleCDSF-serratus_M_contig7990 9389..9484 -
1622932368.6192117-CDS-F-serratus_M_contig7990:9728..99051622932368.6192117-CDS-F-serratus_M_contig7990:9728..9905Fucus serratus maleCDSF-serratus_M_contig7990 9729..9905 -
1690964274.579413-CDS-F-serratus_M_contig7990:9728..99051690964274.579413-CDS-F-serratus_M_contig7990:9728..9905Fucus serratus maleCDSF-serratus_M_contig7990 9729..9905 -
1622932368.63282-CDS-F-serratus_M_contig7990:10325..105291622932368.63282-CDS-F-serratus_M_contig7990:10325..10529Fucus serratus maleCDSF-serratus_M_contig7990 10326..10529 -
1690964274.5908754-CDS-F-serratus_M_contig7990:10325..105291690964274.5908754-CDS-F-serratus_M_contig7990:10325..10529Fucus serratus maleCDSF-serratus_M_contig7990 10326..10529 -
1622932368.645866-CDS-F-serratus_M_contig7990:10881..109981622932368.645866-CDS-F-serratus_M_contig7990:10881..10998Fucus serratus maleCDSF-serratus_M_contig7990 10882..10998 -
1690964274.6023068-CDS-F-serratus_M_contig7990:10881..109981690964274.6023068-CDS-F-serratus_M_contig7990:10881..10998Fucus serratus maleCDSF-serratus_M_contig7990 10882..10998 -
1622932368.6654224-CDS-F-serratus_M_contig7990:11229..113281622932368.6654224-CDS-F-serratus_M_contig7990:11229..11328Fucus serratus maleCDSF-serratus_M_contig7990 11230..11328 -
1690964274.6107397-CDS-F-serratus_M_contig7990:11229..113281690964274.6107397-CDS-F-serratus_M_contig7990:11229..11328Fucus serratus maleCDSF-serratus_M_contig7990 11230..11328 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig7990.19279.1prot_F-serratus_M_contig7990.19279.1Fucus serratus malepolypeptideF-serratus_M_contig7990 9389..11328 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig7990.19279.1

>prot_F-serratus_M_contig7990.19279.1 ID=prot_F-serratus_M_contig7990.19279.1|Name=mRNA_F-serratus_M_contig7990.19279.1|organism=Fucus serratus male|type=polypeptide|length=231bp
MGKAGTDVAKEAADMVLTDDDIATITAAIEEGKGIFYNIKNFLTFQLSTA
VALVDRCSATFADSNVPLNPMQILWINIIMDGPPAQSLGVEPVHGAIVKK
PPRKPGAPVISTRLMFRVSTSGALIVFGTLCVFCLAMINQLSRSAVLTPR
VTTMTFTTFVMFDMFNALCCRSADKIVLKMDMFANKAFLYSVGLSLLGQM
LVIYVPWLQRIFSNGSSIPERSRLHHCGDL*
back to top

mRNA from alignment at F-serratus_M_contig7990:9361..11346-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig7990.19279.1 ID=mRNA_F-serratus_M_contig7990.19279.1|Name=mRNA_F-serratus_M_contig7990.19279.1|organism=Fucus serratus male|type=mRNA|length=1986bp|location=Sequence derived from alignment at F-serratus_M_contig7990:9361..11346- (Fucus serratus male)
GCTGATATCGGCGTCGCAATGGGTAAGGCGGGTACTGATGTCGCCAAGGA
GGCTGCGGACATGGTCCTGACGGATGACGACATCGCCACCATCACGGCGG
CCATCGAGGAGGGCAAGGTGGCTAAGCCTTCATAGCATTATAAGAGGCTC
TTTATCAAAGAATTTGTTGATGCAACTTGGAGGATGATAGCGTAATTGTG
AGTCAGGCATGTTCAGCGTGGTTTTGTCCGATGGCTCTACTATCGTACAT
TGTCGTACATTGTAGCAGTACAGTACTATCGTATGCTTTACAGTACTATC
GTATGTCTACGTTGTTCTTGTTCTTGTTCTACCGGTATGTGTTTACAGGG
CATTTTCTACAACATCAAGAACTTCCTGACGTTCCAGTTGTCGACCGCCG
TTGCGCTTGTCGATCGCTGCTCGGCAACATTCGCGGATTCAAATGTCCCT
CTTAACCCAATGCAGGTGAGGTTATGCTATTCATCGATCTCTTACTCCGG
AGGCATCTCGAATTCTGGACTAAGGTGTTATGCTGTTATGGTGCTGTGCT
TCCATCCTGTGTTGTGAAAACCCTGACAAATTGGAGGTTTCGAGAACGCA
AGGGTCACGAGGAGGAATTGTTTGCCGTGCCGCTTGCTTTTCTATTACAA
TAGAGTACTTTATTATAACAATACTGGTAGAGTGGTACAATAATTTTGTC
TCTTGACCCTGCAACGCGGCATGACTCTAATGCATGTTGGAGCTGCTGCA
GAGATGTCAATCAAAAGTGTTTTACTGTACCTCAAAAGAGCCCTGCGCGG
ATCCTACCTGAACGCAGATCTTGTGGATCAATATTATCATGGACGGTCCA
CCAGCTCAATCTTTGGGTGTGGAGCCAGTTCATGGTGCCATTGTGAAGAA
GCCACCACGAAAACCTGGCGCCCCAGTCATCTCAACGCGCCTCATGTTCC
GCGTATCCACGAGCGGGGCTCTGATTGTCTTCGGGACTTTATGTGTGTTC
TGCTTAGCGATGATAAACCAGGTTAGCGCGGTTGTTTTTCTGTGTCTGCT
TGAATTTTGTTTTGTGTTCGCGACCCAAATGAGATGGTAAGGTCGAACCA
TAAAGCAGATTTAACGATCCCATGTTTCCGTCGAAAGTACATGTTTTACT
TTTCCTCAGGTGTTGGCGTGATTTCTGACACATTGCTGGGGGAGGTAGGG
GAAGGGTTGTGAGATACCGGTGTGTTTGTGTGTGTGTATTTATTGAATTG
CACATAACCACGCAATCCGGCCCTGTCATCCTAGTCATTCTATGCCGTGT
GTGTGTGTGTGTGTGTGTGGTGTTCTTGTTTTGGGTTGTGACGCGCTTGC
TGCTGTTGATCCTCTTGACCCCAACAGCGCTTCAACGCTTCTAGTGTCTT
GCTTTGCCATCTTTGACTTTGACTTATAAAAGAATGGCGAGCTGTCCAGG
AGCGCGGTGCTGACACCGCGGGTCACGACCATGACGTTCACCACCTTCGT
CATGTTCGACATGTTCAACGCGCTATGCTGCCGATCAGCGGACAAGATCG
TGCTGAAAATGGACATGTTCGCTAACAAGGCTTTCCTTTACTCCGTTGGC
TTATCCCTCTTGGGACAGGTAAGGGGTAAGGGGTACCGGTACAGTACAAC
AGTACACCATACTTTAAAGTATACACTTCACTACTTCATAAACTTGCCAT
ATCTCCGTACGCCTCGTTGATTATCCGTCGCTCGCGGCTGTGGGTGGAAA
CGCTGCGCGATGCATCATAATGAATAAGCTCAAACCATCTCAAACCATCT
TGTGCTTACCCGGTCGCTTTTTTTCCGTGCTTTGTTTCCCGATCTATCCA
AATTCGAACCAGATGCTCGTGATCTACGTGCCGTGGTTGCAACGAATTTT
TTCAAACGGAAGCTCTATCCCTGAGCGATCTCGCTTACATCATTGTGGTG
ACCTCTAGCATTGTAGTCCTTGATACTGCAAGGAAG
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig7990:9361..11346-

>mRNA_F-serratus_M_contig7990.19279.1 ID=mRNA_F-serratus_M_contig7990.19279.1|Name=mRNA_F-serratus_M_contig7990.19279.1|organism=Fucus serratus male|type=CDS|length=1386bp|location=Sequence derived from alignment at F-serratus_M_contig7990:9361..11346- (Fucus serratus male)
ATGGGTAAGGCGGGTACTGATGTCGCCAAGGAGGCTGCGGACATGGTCCT
GACGGATGACGACATCGCCACCATCACGGCGGCCATCGAGGAGGGCAAGA
TGGGTAAGGCGGGTACTGATGTCGCCAAGGAGGCTGCGGACATGGTCCTG
ACGGATGACGACATCGCCACCATCACGGCGGCCATCGAGGAGGGCAAGGG
CATTTTCTACAACATCAAGAACTTCCTGACGTTCCAGTTGTCGACCGCCG
TTGCGCTTGTCGATCGCTGCTCGGCAACATTCGCGGATTCAAATGTCCCT
CTTAACCCAATGCAGGGCATTTTCTACAACATCAAGAACTTCCTGACGTT
CCAGTTGTCGACCGCCGTTGCGCTTGTCGATCGCTGCTCGGCAACATTCG
CGGATTCAAATGTCCCTCTTAACCCAATGCAGATCTTGTGGATCAATATT
ATCATGGACGGTCCACCAGCTCAATCTTTGGGTGTGGAGCCAGTTCATGG
TGCCATTGTGAAGAAGCCACCACGAAAACCTGGCGCCCCAGTCATCTCAA
CGCGCCTCATGTTCCGCGTATCCACGAGCGGGGCTCTGATTGTCTTCGGG
ACTTTATGTGTGTTCTGCTTAGCGATGATAAACCAGATCTTGTGGATCAA
TATTATCATGGACGGTCCACCAGCTCAATCTTTGGGTGTGGAGCCAGTTC
ATGGTGCCATTGTGAAGAAGCCACCACGAAAACCTGGCGCCCCAGTCATC
TCAACGCGCCTCATGTTCCGCGTATCCACGAGCGGGGCTCTGATTGTCTT
CGGGACTTTATGTGTGTTCTGCTTAGCGATGATAAACCAGCTGTCCAGGA
GCGCGGTGCTGACACCGCGGGTCACGACCATGACGTTCACCACCTTCGTC
ATGTTCGACATGTTCAACGCGCTATGCTGCCGATCAGCGGACAAGATCGT
GCTGAAAATGGACATGTTCGCTAACAAGGCTTTCCTTTACTCCGTTGGCT
TATCCCTCTTGGGACAGCTGTCCAGGAGCGCGGTGCTGACACCGCGGGTC
ACGACCATGACGTTCACCACCTTCGTCATGTTCGACATGTTCAACGCGCT
ATGCTGCCGATCAGCGGACAAGATCGTGCTGAAAATGGACATGTTCGCTA
ACAAGGCTTTCCTTTACTCCGTTGGCTTATCCCTCTTGGGACAGATGCTC
GTGATCTACGTGCCGTGGTTGCAACGAATTTTTTCAAACGGAAGCTCTAT
CCCTGAGCGATCTCGCTTACATCATTGTGGTGACCTCTAGATGCTCGTGA
TCTACGTGCCGTGGTTGCAACGAATTTTTTCAAACGGAAGCTCTATCCCT
GAGCGATCTCGCTTACATCATTGTGGTGACCTCTAG
back to top