mRNA_F-serratus_M_contig797.19271.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig797.19271.1 vs. uniprot
Match: D8LFS1_ECTSI (DUF1279 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFS1_ECTSI) HSP 1 Score: 131 bits (329), Expect = 2.250e-33 Identity = 65/117 (55.56%), Postives = 86/117 (73.50%), Query Frame = 3
Query: 390 ATPAPAPAMS-MWEDMRKKISGAELKRLMKEYGPVAVTFHTTVFLATLGSFYSLTDYG-LDVSSLVKDIPIIANNLPSPGAGKLAVAWGLTSVTGPARALMTITLTPRVARFWWGRE 734
A + AP ++ W+ R K++ LK MK YG VA TFH +VFL TLG+ YSL DYG LD++ LVKD+PI+A+NLP GAG LA+A+G+TS GP RA++T+T+TPR+ARF GRE
Sbjct: 107 AVASKAPTLADRWKAARSKVTAEYLKHFMKRYGRVAATFHMSVFLGTLGTCYSLIDYGGLDIAELVKDVPILADNLPPAGAGNLAIAYGMTSAIGPPRAVLTVTVTPRIARFLAGRE 223
BLAST of mRNA_F-serratus_M_contig797.19271.1 vs. uniprot
Match: A0A836CBX4_9STRA (DUF1279 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBX4_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 1.150e-18 Identity = 46/89 (51.69%), Postives = 62/89 (69.66%), Query Frame = 3
Query: 462 KRLMKEYGPVAVTFHTTVFLATLGSFYSLTDYGLDVSSLVKDIPIIANN-LPSPGAG-KLAVAWGLTSVTGPARALMTITLTPRVARFW 722
K +MKEYGPVA T H +VFL TLG Y+ + GLD+++L+ +P I L S GAG +LAVA+G T +TGPAR ++T+ TP+VA W
Sbjct: 107 KHIMKEYGPVAATLHGSVFLTTLGGMYAALEKGLDINALLAQLPFIDGAALGSGGAGGQLAVAYGATLMTGPARTILTVVATPKVAHVW 195
BLAST of mRNA_F-serratus_M_contig797.19271.1 vs. uniprot
Match: A0A835ZET6_9STRA (DUF1279 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZET6_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 5.170e-17 Identity = 43/96 (44.79%), Postives = 63/96 (65.62%), Query Frame = 3
Query: 441 KISGAELKRLMKEYGPVAVTFHTTVFLATLGSFYSLTDYGLDVSSLVKDIPIIANNL--PSPGAGKLAVAWGLTSVTGPARALMTITLTPRVARFW 722
++S L R ++YGPVA H++V++ TLGS Y+ GLD++SL+ IP++ +L + AG LAVA+G T +TGP RA++TIT TP A W
Sbjct: 5 RLSHENLLRFARKYGPVAGVVHSSVYVCTLGSMYTAIASGLDLTSLLAQIPLMDQDLLTANAAAGHLAVAYGATMLTGPMRAVVTITATPAAADVW 100
BLAST of mRNA_F-serratus_M_contig797.19271.1 vs. uniprot
Match: A0A024TND5_9STRA (DUF1279 domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TND5_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 4.680e-13 Identity = 41/90 (45.56%), Postives = 55/90 (61.11%), Query Frame = 3
Query: 450 GAELKRLMKEYGPVAVTFHTTVFLATLGSFYSLTDYGLDVSSLVKDIPIIANNLPSPGAGKLAVAWGLTSVTGPARALMTITLTPRVARF 719
G +LK++ KEYG VAV FH+TVFLATLGS Y+ G+D+ + +P I +P AG +A+ T TGP R +TI TP +AR
Sbjct: 17 GEKLKQVTKEYGQVAVVFHSTVFLATLGSAYASIRMGVDIRHV--KVPFINLEDINPDAGSFLLAYLATLATGPLRGGITIVSTPWIARM 104
BLAST of mRNA_F-serratus_M_contig797.19271.1 vs. uniprot
Match: W4GND2_9STRA (DUF1279 domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GND2_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 3.390e-11 Identity = 37/90 (41.11%), Postives = 55/90 (61.11%), Query Frame = 3
Query: 450 GAELKRLMKEYGPVAVTFHTTVFLATLGSFYSLTDYGLDVSSLVKDIPIIANNLPSPGAGKLAVAWGLTSVTGPARALMTITLTPRVARF 719
G +LK++ KEYG VAV FH++VF+ATLGS Y+ G+D+ + +P + P AG +A+ +T TGP R +T+ TP +AR
Sbjct: 71 GEKLKQVTKEYGKVAVVFHSSVFVATLGSAYTSIRMGVDIRHV--KVPFVNLEDVDPDAGSFFLAYLVTLATGPLRGGITVISTPWIARL 158
BLAST of mRNA_F-serratus_M_contig797.19271.1 vs. uniprot
Match: A0A6G0WVK7_9STRA (DUF1279 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WVK7_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 1.170e-9 Identity = 35/86 (40.70%), Postives = 52/86 (60.47%), Query Frame = 3
Query: 462 KRLMKEYGPVAVTFHTTVFLATLGSFYSLTDYGLDVSSLVKDIPIIANNLPSPGAGKLAVAWGLTSVTGPARALMTITLTPRVARF 719
K ++KEYG +AV FH++V++AT G+ Y+ GLDV IP+I P A L +A+ +T+ TGP R TI ++P +AR
Sbjct: 48 KLVLKEYGKIAVVFHSSVWVATFGASYTCVRMGLDVRHF--KIPLINLEDIDPDASSLILAYLVTTATGPLRGGATIVMSPWIARM 131
BLAST of mRNA_F-serratus_M_contig797.19271.1 vs. uniprot
Match: UPI000854CBA1 (protein FAM210B n=1 Tax=Nanorana parkeri TaxID=125878 RepID=UPI000854CBA1) HSP 1 Score: 63.2 bits (152), Expect = 6.600e-9 Identity = 32/92 (34.78%), Postives = 51/92 (55.43%), Query Frame = 3
Query: 456 ELKRLMKEYGPVAVTFHTTVFLATLGSFYSLTDYGLDVSSLVKDIPI---IANNLPSPGAGKLAVAWGLTSVTGPARALMTITLTPRVARFW 722
+LKR+ KEYG VAVTFH + L +LG FY+L GLDV +L+ + + + + G +A+ + + P R MT+ P + R++
Sbjct: 22 QLKRVFKEYGGVAVTFHVGISLVSLGIFYTLVSSGLDVPALLLKVGFSEALVQSKMAAGTSTFVLAYAIHKLFAPVRMSMTVVSVPFLVRYF 113
BLAST of mRNA_F-serratus_M_contig797.19271.1 vs. uniprot
Match: A0A1L8ESU0_XENLA (protein FAM210B, mitochondrial n=1 Tax=Xenopus laevis TaxID=8355 RepID=A0A1L8ESU0_XENLA) HSP 1 Score: 60.8 bits (146), Expect = 1.780e-7 Identity = 28/91 (30.77%), Postives = 51/91 (56.04%), Query Frame = 3
Query: 456 ELKRLMKEYGPVAVTFHTTVFLATLGSFYSLTDYGLDVSSLVKDIPI---IANNLPSPGAGKLAVAWGLTSVTGPARALMTITLTPRVARF 719
+LK++ KEYG VAV+FH + L +LG FY + G+D++SL+ + + + + G +A+ + + PAR +T+ P + R+
Sbjct: 97 QLKKVFKEYGAVAVSFHVAISLVSLGIFYVIVSSGVDITSLLSKVGFSEAVVQSKLAAGTSTFVLAYAIHKLFAPARISITLVSVPFIVRY 187
BLAST of mRNA_F-serratus_M_contig797.19271.1 vs. uniprot
Match: Q6DFH7_XENLA (MGC83126 protein n=2 Tax=Xenopus laevis TaxID=8355 RepID=Q6DFH7_XENLA) HSP 1 Score: 60.5 bits (145), Expect = 2.320e-7 Identity = 29/101 (28.71%), Postives = 54/101 (53.47%), Query Frame = 3
Query: 426 EDMRKKISGAELKRLMKEYGPVAVTFHTTVFLATLGSFYSLTDYGLDVSSLVKDIPI---IANNLPSPGAGKLAVAWGLTSVTGPARALMTITLTPRVARF 719
E+ K +L+++ KEYG VAV+FH + L +LG FY + G+D++SL+ + + + + G +A+ + + PAR +T+ P + R+
Sbjct: 87 ENEEKPNKTKQLRKVFKEYGAVAVSFHVAISLVSLGIFYGIVSSGIDITSLLLKVGFSEAVVQSKLAAGTSTFVLAYAIHKLFAPARISITLVSVPFIVRY 187
BLAST of mRNA_F-serratus_M_contig797.19271.1 vs. uniprot
Match: A0A7S0L5M9_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L5M9_9EUKA) HSP 1 Score: 60.1 bits (144), Expect = 3.560e-7 Identity = 33/96 (34.38%), Postives = 54/96 (56.25%), Query Frame = 3
Query: 453 AELKRLMKEYGPVAVTFHTTVFLATLGSFYSLTDYGL----DVSSLVKDIP---IIANNLPSPGAGKLAVAWGLTSVTGPARALMTITLTPRVARF 719
A+L+ L+KEYG + + + V+L+TLGS + D GL D S+++ + + + +P A+AW L T P R L+T+ +TPR+AR
Sbjct: 105 AKLRALVKEYGALGIGVYAGVYLSTLGSLFLAVDCGLLPAGDALSMLRSVGADRLFDLDKLNPKTSNFAIAWILAKFTEPLRMLVTLAITPRLARL 200 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig797.19271.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig797.19271.1 >prot_F-serratus_M_contig797.19271.1 ID=prot_F-serratus_M_contig797.19271.1|Name=mRNA_F-serratus_M_contig797.19271.1|organism=Fucus serratus male|type=polypeptide|length=237bp MATKGLSTMLTISVRVSAGRLLRTASFAVSTRCRHLSEYPKPASRRQKEDback to top mRNA from alignment at F-serratus_M_contig797:357497..360528+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig797.19271.1 ID=mRNA_F-serratus_M_contig797.19271.1|Name=mRNA_F-serratus_M_contig797.19271.1|organism=Fucus serratus male|type=mRNA|length=3032bp|location=Sequence derived from alignment at F-serratus_M_contig797:357497..360528+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig797:357497..360528+ >mRNA_F-serratus_M_contig797.19271.1 ID=mRNA_F-serratus_M_contig797.19271.1|Name=mRNA_F-serratus_M_contig797.19271.1|organism=Fucus serratus male|type=CDS|length=1422bp|location=Sequence derived from alignment at F-serratus_M_contig797:357497..360528+ (Fucus serratus male)back to top |