prot_F-serratus_M_contig797.19265.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig797.19265.1
Unique Nameprot_F-serratus_M_contig797.19265.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length440
Homology
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BLAST of mRNA_F-serratus_M_contig797.19265.1 vs. uniprot
Match: A0A6H5KWG5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KWG5_9PHAE)

HSP 1 Score: 212 bits (540), Expect = 3.880e-58
Identity = 180/465 (38.71%), Postives = 225/465 (48.39%), Query Frame = 0 
Query:    8 LPPPKFIQVFGVALVLCYVAVARIRGGRTQAKGRKQRRASTLKTLLIQRKEGQLTGLSGACCEGLVDLIRESEPLPPPLPRQEGAST--SMTLEELAHSILVVVVVGPGSTKVYQDYVVTKLVRYLRWSNLVPKLFSAVEHDRN------APQEVNHPNLGE-DPLEGKGNGADEPRERSSVTTDRPPNG----LTNGNGHGGPDGGDRTDDGAPAKGVTIGRHDRISDSARKSHPRSSFSERGKAAALATIAVQESATQVADWLNALSSGRVAVVEAGGTGWASTRRGRD--TLRDRLREATTPDLGILWVELLPAGLSHRG----------------------------------------------------TEAEASTAGGAGTGTWKSANGLPCA-PHGPGEHVVDTFLRSGYLVGAGGHVFYESLRGGSQGPSTSVTSS--NCFVSLADEGADVRRQRE 402
            +P PK +   G+  +LCYVA++R RGG       +  R+S+ +     RK G   G S   C+G +DLIR    L     R E   T  S+T ++L    LVVV++GP ST V+Q YVV KL+RYLRWSNL+ + F     D        A       NL E      + NG       + + T   P G    LTNGNGHG               G   G   R + + R++H  + +S+RGKAAAL TIA QES  +VA WLN LS+G VAVVEA        R GR   T   RL E   PD+G+LWVE+LP+GL H G                                                    TEA  ST  G G G WKS NGL    P GPG +VVDTFL+SG LVGAGGHV YES+R G +G +        +CFVSLAD+G DV+ Q E
Sbjct:    1 MPEPKLLPSLGITFLLCYVALSRARGGGASRLSSRSHRSSSSRQK--PRKRGGADGGSEQQCQGFLDLIRNESQL-----RHEQRQTKPSLTRKQLGEGRLVVVIIGPASTGVHQSYVVEKLLRYLRWSNLIRRHFLMTPDDLGSTARDVASSSAPRDNLTELSSSRNRENGCHTRSTGNVLDTGATPGGKNGSLTNGNGHG--------------SGGKNGDRKRGTPAVRQTHGYT-YSDRGKAAALETIAAQESVKKVAAWLNGLSAGGVAVVEAR-VRRQGYRGGRTPPTKNQRL-ETAGPDVGVLWVEVLPSGLYHHGSSSCSNGGSNTGADDPLRSPTLLPHSLPLVKHTGGSGHPQTAAAHRSSGSTATEAARSTDNGVG-GAWKSINGLARGVPKGPGGNVVDTFLQSGSLVGAGGHVIYESVRRGVRGGAXXXXGKGKSCFVSLADQGLDVQSQLE 440
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig797.19265.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KWG5_9PHAE3.880e-5838.71Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..31
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 32..439

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig797contigF-serratus_M_contig797:120367..138733 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig797.19265.1mRNA_F-serratus_M_contig797.19265.1Fucus serratus malemRNAF-serratus_M_contig797 116865..138793 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig797.19265.1 ID=prot_F-serratus_M_contig797.19265.1|Name=mRNA_F-serratus_M_contig797.19265.1|organism=Fucus serratus male|type=polypeptide|length=440bp
MRGGGGALPPPKFIQVFGVALVLCYVAVARIRGGRTQAKGRKQRRASTLK
TLLIQRKEGQLTGLSGACCEGLVDLIRESEPLPPPLPRQEGASTSMTLEE
LAHSILVVVVVGPGSTKVYQDYVVTKLVRYLRWSNLVPKLFSAVEHDRNA
PQEVNHPNLGEDPLEGKGNGADEPRERSSVTTDRPPNGLTNGNGHGGPDG
GDRTDDGAPAKGVTIGRHDRISDSARKSHPRSSFSERGKAAALATIAVQE
SATQVADWLNALSSGRVAVVEAGGTGWASTRRGRDTLRDRLREATTPDLG
ILWVELLPAGLSHRGTEAEASTAGGAGTGTWKSANGLPCAPHGPGEHVVD
TFLRSGYLVGAGGHVFYESLRGGSQGPSTSVTSSNCFVSLADEGADVRRQ
RERERVRWRGGWEISQRPLRSKRLGKDVRCFLHGTENHS*
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