mRNA_F-serratus_M_contig796.19249.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig796.19249.1 vs. uniprot
Match: D8LEV4_ECTSI (C2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEV4_ECTSI) HSP 1 Score: 744 bits (1921), Expect = 5.500e-220 Identity = 544/1397 (38.94%), Postives = 705/1397 (50.47%), Query Frame = 2
Query: 2 GGQKTDRGKNLGQVRLSGDFVPYIVHGAVISRPLRPPRVRGRLLNSTARGSLSVQLWLRRGGEILASEFVNTTVMVETLAVKGLPHAESRGH-AFCIVKEDKREIGRTQPSLILPAYPAFDVAPATLAGATAKDLVT--GRASWEDSG----TRFMVTKSKEREGSLPLELAVEVW--------------------GINNGKVGVDGSLRGGDIKNTKDSCFQLIGIVTIGSDELLLSHQGRVSLPIQTSPG--------------SIGTAATASSCSLPTNSDRESEAAAGLMLENPEIVLRVTHQIGLRWARRAMEAA-------------------KIATRSMNPRSVTSKEGYRHVSASAHVVYMTNAEGATRKRHAPVAPSDSIPLKAFDDAVELIYASLPACCPNTPTLVVAPVSDVGVRVGTAWVGPQVDARHAIVAYRPAQAA-----------GGNGRGGDHVKTAKEVEN------DPPVEDELFIRNVAAEVEGILREFRAKEMRVEQRRLALSRVREICDTWTCTQIEVDQAAQAARGGEDEHNDSVQLKTLPLF--------------------DEQE----MSDDECDDREGTDE-----------------DHSSGRARDALYRGFVRALEMALPGVSIYLGLLASGGQTIKYVACSRASSMAGKELLQGEGVSFSCVGPLYAPSIVYPPSGAGGPNYG-------------------KRGNRGAHDVDSSMSSQPKEISACQAWSFQEGNIARARHGPTKHTGAACDGAERAGLKLTTSAEASYRLSPEQGVVQVQSAFRGKLMREWLK----RREESSSTTDGAERDVRSIDSEPYKGGMAAWA-LANSVPS--IPKIFDVGGQVGWPFVCVPIVGFLGASSIGVVGMDTFDEMGSRHDGS---KPEAWVVQMVAEAASLLGKVICCERRQRAVNDVAKSSITSTSTVIDVLIAMARATEGSMITSRGAEVWKVDPSTGAIFVVTRRGSNREQDFEGARVEVP-----RFRRLKVEVISANLRTTLNDCCRSSTASAAGSFHSVAVRVIADEG-------------------NSFRTTPCRVKLLAGASCSPVWDGGERCLRINPGVTHLRVHVVARV--------AQSQGNK----------------SAFGRPACGAETTGGDPDVVLAVASVRLNATCDGLNNVELLPPGRSDCVDGDSRPYAEEESATNRRVKKVEPSNSVGHLTLRLRWLTSGEEDG---DQVVLFIHGASGLARVDLSYKAHPFCVVKWRGMELGRTQICSDTCEPDWGHEMFQLAL---SPDPVEKLPPLILEVWNNGTRGAQADFLGQVVLESNDVKVPFDGVQKLPLTRKPAVEFRPGAQKHVQGILEFSL 3589
GG + + G +LGQV L+GDFVP++ HGAV+ RPLRP R N ARGSLS QLWLRRGGE LASEFV++ + VE LA KGLP R AFCIVKED+ EIGRTQ S+I D++ +T A T ++ G SWE+ +F VT S G LPLEL VE+W N V S + + S + IG + D LLLS GRVSLP++ P SI A+ N+ + EA A +IVLRVT Q+GLRWARR M AA K+ T S N + T+ G AHVVYMTNAEG+ RK APV P +SIP K ++D +EL++AS+PACCP P+L+VAPVSD+GVR+G W+GP++ ARHA+VA+RP Q GG G KT+ + +PP EDELF+R VAAE EG+LR RA++MR EQRR+ LSRVREICD W + +H + + L DE E M D + DD DH GRA LYR +RALE+ALPGVSIYLGLL SG Q+I+YV+C+R SSMAGK+L +GEG+SFSCVGP YAP +VYPP P G K+ N V SS S+P A + + E I + T H + S E+GVV +Q FRGKL R+ ++ + E+++T++ KGG + A P+ IPK+FD G+VGWPFVCVP+ GFL +SSIGV+G+DTF++MG+ GS +PE VV+MVAEAA LG + C+RR+RA+ VA+S ++ S++IDVLIA A+A E S+I S AEVWKVDPS G++FVVT+R R P R+LKVEV +A L + A + HSVAVR+ G N+FRT P VK L+ +CSP W G R L + ++ LR ++A+V + GN+ + GR GA + ++VLA ASV +NA DG N V+L G D EP G S EE G L IHGASGLA+ D + P+CVVKW G+ELGRT+ C +T EP WG E F+LAL P+ +K PLILEVW+ G + DFLGQVVL++N ++ P G + + L+RKPA E + QK VQG++EFSL
Sbjct: 2972 GGPEKEYGDHLGQVILTGDFVPHLAHGAVVCRPLRPQRSHRSTSNPAARGSLSFQLWLRRGGESLASEFVHSALTVEVLAAKGLPPPSGRWRRAFCIVKEDEVEIGRTQTSVI------DDISTSTTAAVTTDKGISMPGVVSWEEDHHEDTNQFAVTLSPRHGGGLPLELTVELWETSLAKDEDEDEDSICVGKRAAGNANVTFIRSRKNRPEHEGQQSSVRRIGSARVRPDTLLLSVPGRVSLPLELLPAGSNSTCRSGAKGGASISPVVGATGTKQTVNAGKSDEAGA----LTSKIVLRVTPQVGLRWARRVMTAARAAKRFIALPSPPTLSPGTKLLTTSPNNHTSTALSGDTDDVHEAHVVYMTNAEGSARKWRAPVTPGNSIPCKDYEDVLELVFASVPACCPRAPSLLVAPVSDIGVRLGKVWIGPKIAARHALVAHRPEQHQQTSSDHNKKNDGGKGLKVGDKKTSYPSSDGGDAPVEPPREDELFVRVVAAEAEGLLRHIRARDMRAEQRRMTLSRVREICDAWNHARARRGDPQHQGTAHPTDHVKQEEARRLSSASHLATGGSRAGFHSEGNDGGDEPEGQGRMQDPDSDDXXXXXXXXXXXXXXXXXXXXXXXDHIDGRAYGDLYRRVLRALEIALPGVSIYLGLLESGAQSIRYVSCTRQSSMAGKQLKRGEGISFSCVGPSYAPYVVYPPRRREAPKQGRVTINSNSQVRGPPRNEEEKQENATPRPVSSSSLSEPSTTEAVETATAAE--IPPSDRHQTPHV----------------------QRSLEEGVVSIQKLFRGKLGRDRMQHAHQQHPEAANTSN--------------KGGRTTFGEAATKKPALMIPKVFDYEGRVGWPFVCVPLEGFLRSSSIGVMGLDTFEQMGN--SGSVRDQPETGVVRMVAEAARALGNAVSCDRRRRALKAVAESCLSLKSSLIDVLIATAKAVEDSIIPSSRAEVWKVDPSDGSLFVVTKRLPGPTDHLLSGRAMQPPDERSSCRQLKVEVTAAELSPAM-------AAEPVRAIHSVAVRISTTTGERGVGRDSIIGAGNKGSNSNAFRTAPFYVKQLSTTTCSPQWYEGHRRLHVTNSISSLRAEILAKVNLGSRGKGGTTMGNERRGQQQQLQAPPAEGVTPTGRGVGGAAELAANSEIVLAYASVDINAVRDGYNYVQLFSSGHRDDXXXXXXXXX---------XXXAEPGEGGG----------SKEELGWGRGYTTLVIHGASGLAKADRLGDSDPYCVVKWGGVELGRTKTCPNTREPKWGDERFRLALPAEEPNDKKKHLPLILEVWDEDMPGTKGDFLGQVVLQANKLEDPAPGPRGIVLSRKPAAELKLSKQKLVQGMVEFSL 4292
BLAST of mRNA_F-serratus_M_contig796.19249.1 vs. uniprot
Match: A0A6H5KK33_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK33_9PHAE) HSP 1 Score: 640 bits (1652), Expect = 2.320e-186 Identity = 513/1419 (36.15%), Postives = 673/1419 (47.43%), Query Frame = 2
Query: 2 GGQKTDRGKNLGQVRLSGDFVPYIVHGAVISRPLRPPRVRGRLLNSTARGSLSVQLWLRRGGEILASEFVNTTVMVETLAVKGLPHAESRG--HAFCIVKEDKREIGRTQPSLILPAYPAFDVAPATLAGATAKDLVT--GRASWED---SGTRFMVTKSKEREGSLPLELAVEVW--------------------GINNGKVGVDGSLRGGDIKNTKDSCFQLIGIVTIGSDELLLSHQGRVSLPIQTSPGSI----------GTAATASSCSLPTNSDRESEAAAGLMLENPEIVLRVTHQIGLRWARRAMEAAKIATRSMNPRSV--------TSKEGYRHVSAS--------AHVVYMTNAEGATRKRHAPVAPSDSIPLKAFDDAVELIYASLPACCPNTPTLVVAPVSDVGVRVGTAWVGPQVDARHAIVAYRPAQAA----------GGNGRGGDHVKTAK------EVENDPPVEDELFIRNVAAEVEGILREFRAKEMRVEQRRLALSRVREICDTWTCTQI-------------------EVDQAAQAAR----------------GGEDEHNDSVQLKTLPLFDEQEMSDDECDDR--EGTDEDHSS----------GRARDALYRGFVRALEMALPGVSIYLGLLASGGQTIKYVACSRASSMAGKELLQGEGVSFSCVGPLYAPSIVYPPSGAGGPNYGKRGNRGAHDVDSSMSSQPKEISACQAWSFQEGNIARARHGPTKHTGAACDGAERAGLKLTTSAEASYRLSPEQGVVQVQSAFRGKLMREWLKRREESSSTTDGAERDVRSIDSEPYKGGMAAWALANSVPSIPKIFDVGGQVGWPFVCVPIVGFLGASSIGVVGMDTFDEMGSRHDGS---KPEAWVVQMVAEAASLLGKVICCERRQRAVNDVAKSSITSTSTVIDVLIAMARATEGSMITSRGAEVWKVDPSTGAIFVVTRRGSN-REQDFEGARVEVP----RFRRLKVEVISANLRTTLNDCCRSSTASAAGSFHSVAVRVIADEG-------------------NSFRTTPCRVKLLAGASCSPVWDGGERCLRINPGVTHLRVHVVARV--------AQSQGNK----------------SAFGRPACGAETTGGDPDVVLAVASVRLNATCDGLNNVELLPPGRSDCVDGDSRPYAEEESATNRRVKKVEPSNSVGHLTLRLRWLTSGEEDGDQVVLFIHGASGLARVDLSYKAHPFCVVKWRGMELGRTQICSDTCEPDWGHEMFQLALSPDPVEKLPPLILEVWNNGTRGAQADFLGQVVLESNDVKVPFDGVQKLPLTRKPAVEFRPGAQKHVQGILEFSL--VKRTFSDEADASGSKVAAAITTPAVEADTKF-SKQGNIGERDGGFASPDKSFAG 3748
GG + + G +LGQV LSGDFVP++ HGAV+ RPLRP R N RGSLS QLWLRRGGE LASEFV++ + VE LA KGLP S G AFCIVKED+ EIGRTQ S+I D++ +T+A T V+ G SWED +F VT S R G LPLEL VE+W N V + S + + S + IG + D LLLS GRVSLP++ P S GT+ + + T ++ A +IVLRVT Q GL WARR M AA+ A R +P ++ TS + + S AHVVYMTNAEG+ R APV P +SIP K ++D +EL++AS+PACCP P+L VAPVSD+GVR+G W+GP++ ARHA+VA+RP G G G KT+ +V +PP EDELF+R VAAE EG+LR RA++MR EQRR+ LSRVREICD W+ + E Q +AR GG DE ++ SDD D R + +DED GRA LYR +RALE+ALPGVSIY+GLL SG Q+I+YVAC+R SSMAGK+L +GEG+SFSCVGP YAP +VYPP G+ ++ +E F +++ T A + + T AE S E+GVV +Q FRGKL R+ +K + R+ E A IP +FD G+VGWPFVCVP+ GFL ++SIGV+GMDTF++MG+ GS +PE VV+MVAEAAS C+RR+RA+ VA+S ++ S++IDVLI A+A E +I S AEVWKVDPS G++FVVT+R + + G + P +R+LKVEV +A L + A + SVAVR+ G N+FRT P VK L+ +CSP W G R L + T+LR ++A+V + GN+ + GR GA + ++VLA ASV LNA DG N V+L G D D P+ +K PLILEVW+ G + DFLGQVVL++N ++ P G + + L++KPA E + QK VQG++EFSL V+ + EA A + VE DT S + GG A SFAG
Sbjct: 26 GGPEKENGDHLGQVVLSGDFVPHLAHGAVVCRPLRPQRSHRSTSNPAVRGSLSFQLWLRRGGESLASEFVHSALTVEVLAAKGLP-PRSGGWRRAFCIVKEDEVEIGRTQTSVI------DDISTSTIAAVTTDKGVSMPGVVSWEDHHKDTNQFAVTLSPRRGGGLPLELTVEMWETSLAKDEDGHEDSISVGKRAAGNANVTLIRSRKNRPEHEGQQSSVRRIGTARVRPDTLLLSVPGRVSLPLELLPASSNSTCRSGAKEGTSISPGVGAAGTKQTVKASKADEAGALTSKIVLRVTPQAGLGWARRVMTAARAAKRFPSPPTLSPGTKVLTTSPNNHTSTALSDDSDDVHDAHVVYMTNAEGSARTWRAPVTPGNSIPCKDYEDVLELVFASVPACCPRAPSLFVAPVSDIGVRLGKVWIGPKIAARHALVAHRPEHYQQTSSNHKKNDGSKGLNGGDKKTSYPSFDCGDVTEEPPREDELFVRVVAAEAEGLLRNIRARDMRAEQRRMTLSRVREICDAWSHARARRGDPQHQGTAHPTDHVKQEEAQRLSSARHLGTAGSRGGVSSGGNGGGDEREGQGSMQNPD-------SDDSRDKRGSDSSDEDEXXXXXXXXXXXXGRAYGDLYRKVLRALEIALPGVSIYIGLLESGAQSIRYVACTRQSSMAGKQLKRGEGISFSCVGPSYAPYVVYPPRKREASKQGRAITSSNSQARGPPRNEEEERENATPQPFSSSSLSEPSTTEAVETATAAE-IPSSDRHQTPHAERSL----EEGVVSIQKVFRGKLDRDRMKHAHQQHPAAANTSNGGRTTFGEA--------ATKKPALMIPTVFDYEGRVGWPFVCVPLEGFLRSTSIGVMGMDTFEQMGN--SGSVRDQPETGVVRMVAEAAS-------CDRRRRALKAVAESCLSLKSSLIDVLITTAKAVEELIIPSSRAEVWKVDPSDGSLFVVTKRLPDPTDHLLSGGATQPPDEQLSYRQLKVEVTAAELSPAM-------AAEPVRAIQSVAVRISTTTGERGVGRDSIIGAGNKGSNSNAFRTAPFYVKQLSTTTCSPQWYEGHRRLHVTNSTTNLRAEILAKVDLGSRGKGGTTMGNERRGQQQELQAPPAEGVTPTGRGVGGAAELAANSEIVLANASVDLNAVRDGYNYVQLFSSGHRD----------------------------------------------------------------------------------------DXXXXXXXXXXXXXXEEPNDTKKHLPLILEVWDEDMPGTKGDFLGQVVLQANKLEDPAPGPRGIVLSKKPAAELKLSKQKLVQGMVEFSLETVRAAAAAEAAALAESGGTIALSKNVEGDTSTASATDRVQAGKGGTA----SFAG 1309 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig796.19249.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig796.19249.1 >prot_F-serratus_M_contig796.19249.1 ID=prot_F-serratus_M_contig796.19249.1|Name=mRNA_F-serratus_M_contig796.19249.1|organism=Fucus serratus male|type=polypeptide|length=1181bp MVETLAVKGLPHAESRGHAFCIVKEDKREIGRTQPSLILPAYPAFDVAPAback to top mRNA from alignment at F-serratus_M_contig796:122406..132643+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig796.19249.1 ID=mRNA_F-serratus_M_contig796.19249.1|Name=mRNA_F-serratus_M_contig796.19249.1|organism=Fucus serratus male|type=mRNA|length=10238bp|location=Sequence derived from alignment at F-serratus_M_contig796:122406..132643+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig796:122406..132643+ >mRNA_F-serratus_M_contig796.19249.1 ID=mRNA_F-serratus_M_contig796.19249.1|Name=mRNA_F-serratus_M_contig796.19249.1|organism=Fucus serratus male|type=CDS|length=7086bp|location=Sequence derived from alignment at F-serratus_M_contig796:122406..132643+ (Fucus serratus male)back to top |