prot_F-serratus_M_contig7948.19238.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig7948.19238.1
Unique Nameprot_F-serratus_M_contig7948.19238.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length70
Homology
BLAST of mRNA_F-serratus_M_contig7948.19238.1 vs. uniprot
Match: A0A0C2WN23_AMAMK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WN23_AMAMK)

HSP 1 Score: 62.0 bits (149), Expect = 1.490e-9
Identity = 28/54 (51.85%), Postives = 39/54 (72.22%), Query Frame = 0
Query:   10 YTQVARSKDKLVVGSKMLFKRNIGQDGKVEKYKCRLVAQGFWQVECVHYTEKYS 63
            + +V R +D+ ++GSK +FK   G DG+VEKYK RLVAQGF QVE + Y E ++
Sbjct: 1027 FEEVPRPRDRKIIGSKWVFKTKTGPDGQVEKYKARLVAQGFSQVEGIDYNETFA 1080          
BLAST of mRNA_F-serratus_M_contig7948.19238.1 vs. uniprot
Match: A0A2R6NNP3_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A2R6NNP3_9APHY)

HSP 1 Score: 60.8 bits (146), Expect = 3.680e-9
Identity = 31/66 (46.97%), Postives = 44/66 (66.67%), Query Frame = 0
Query:    1 MLGMVERLAYTQVARSKDKLVVGSKMLFKRNIGQDGKVEKYKCRLVAQGFWQVECVHYTEKYSSTA 66
            ML  V+   + +V   K++ VVGSK +F+   G +GK+EKYK RLVAQGF QV+ + YTE ++  A
Sbjct:   17 MLAFVKANLFDEVECPKNRKVVGSKWVFRIKRGPNGKIEKYKARLVAQGFTQVKGIDYTETFAPVA 82          
BLAST of mRNA_F-serratus_M_contig7948.19238.1 vs. uniprot
Match: A0A1C7MSU6_GRIFR (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Grifola frondosa TaxID=5627 RepID=A0A1C7MSU6_GRIFR)

HSP 1 Score: 59.7 bits (143), Expect = 9.580e-9
Identity = 29/63 (46.03%), Postives = 43/63 (68.25%), Query Frame = 0
Query:    1 MLGMVERLAYTQVARSKDKLVVGSKMLFKRNIGQDGKVEKYKCRLVAQGFWQVECVHYTEKYS 63
            +L  V+   Y +V R +D+ VVG K +F+   G DG++EKYK R+VA+GF QVE V YT+ ++
Sbjct:  305 LLTFVKAELYDEVERPRDRKVVGCKWVFRIKRGPDGEIEKYKARVVAKGFTQVEGVDYTDTFA 367          
BLAST of mRNA_F-serratus_M_contig7948.19238.1 vs. uniprot
Match: A0A4Y9XTU1_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Fomitopsis rosea TaxID=34475 RepID=A0A4Y9XTU1_9APHY)

HSP 1 Score: 59.7 bits (143), Expect = 9.690e-9
Identity = 30/65 (46.15%), Postives = 42/65 (64.62%), Query Frame = 0
Query:    1 MLGMVERLAYTQVARSKDKLVVGSKMLFKRNIGQDGKVEKYKCRLVAQGFWQVECVHYTEKYSST 65
            +L   +   Y +V R +++ VVG K +FK   G DG++EKYK RLVA+GF QVE V Y E ++ T
Sbjct:  972 LLSFTKAELYDEVERPRNRKVVGCKWVFKIKRGPDGEIEKYKARLVAKGFTQVEDVDYDETFAPT 1036          
BLAST of mRNA_F-serratus_M_contig7948.19238.1 vs. uniprot
Match: A0A1X7TFD5_AMPQE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7TFD5_AMPQE)

HSP 1 Score: 55.8 bits (133), Expect = 1.570e-8
Identity = 29/59 (49.15%), Postives = 40/59 (67.80%), Query Frame = 0
Query:    6 ERLAYTQVARSKDKLVVGSKMLFKRNIGQDGKVEKYKCRLVAQGFWQVECVHYTEKYSS 64
            E   +  V   KD+ VVGSK +FKR IG++GKVE+YK RLVAQG+ Q   +++  K +S
Sbjct:   10 ENQVWDLVELPKDRRVVGSKWVFKRKIGENGKVERYKARLVAQGYSQKFNMNHARKNAS 68          
BLAST of mRNA_F-serratus_M_contig7948.19238.1 vs. uniprot
Match: A0A060SUY4_PYCCI (Uncharacterized protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SUY4_PYCCI)

HSP 1 Score: 58.2 bits (139), Expect = 3.380e-8
Identity = 29/69 (42.03%), Postives = 43/69 (62.32%), Query Frame = 0
Query:    1 MLGMVERLAYTQVARSKDKLVVGSKMLFKRNIGQDGKVEKYKCRLVAQGFWQVECVHYTEKYSSTAAAA 69
            +L   +   Y +V R +++ VVG K +F+   G DG VE+YK RLVAQGF QVE + Y+E ++  +  A
Sbjct:  953 LLAFAKAEPYDEVERPQNRKVVGCKWVFRLKRGADGSVERYKARLVAQGFTQVEGIDYSEMFAPVSKFA 1021          
BLAST of mRNA_F-serratus_M_contig7948.19238.1 vs. uniprot
Match: A0A4S4N6A1_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Antrodiella citrinella TaxID=2447956 RepID=A0A4S4N6A1_9APHY)

HSP 1 Score: 57.8 bits (138), Expect = 4.570e-8
Identity = 27/59 (45.76%), Postives = 41/59 (69.49%), Query Frame = 0
Query:    5 VERLAYTQVARSKDKLVVGSKMLFKRNIGQDGKVEKYKCRLVAQGFWQVECVHYTEKYS 63
            V+   YT V R +++ V+ SK +FK  +G DG++EKYK RLVA+GF QVE + Y + ++
Sbjct:  305 VKAKLYTAVDRPRNRKVIDSKWVFKYKLGPDGQIEKYKARLVAKGFTQVEGLDYNDTFA 363          
BLAST of mRNA_F-serratus_M_contig7948.19238.1 vs. uniprot
Match: A0A8H7NTQ9_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Postia placenta TaxID=104341 RepID=A0A8H7NTQ9_9APHY)

HSP 1 Score: 57.0 bits (136), Expect = 8.620e-8
Identity = 28/60 (46.67%), Postives = 40/60 (66.67%), Query Frame = 0
Query:   10 YTQVARSKDKLVVGSKMLFKRNIGQDGKVEKYKCRLVAQGFWQVECVHYTEKYSSTAAAA 69
            Y +V R +D+ VV  K +FK   G DG+++KYK RLVA+GF QVE + +TE ++  A  A
Sbjct:  656 YDEVERPRDRKVVDCKWVFKIKRGPDGEIKKYKARLVAKGFTQVEGIDFTETFAPVAKFA 715          
BLAST of mRNA_F-serratus_M_contig7948.19238.1 vs. uniprot
Match: A0A1M2VV58_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VV58_TRAPU)

HSP 1 Score: 56.2 bits (134), Expect = 1.620e-7
Identity = 27/60 (45.00%), Postives = 39/60 (65.00%), Query Frame = 0
Query:   10 YTQVARSKDKLVVGSKMLFKRNIGQDGKVEKYKCRLVAQGFWQVECVHYTEKYSSTAAAA 69
            Y +V + + + VVG K +FK   G DG +EKYK RLVA+GF QVE + YT+ ++  +  A
Sbjct: 1021 YDEVEKPRGRKVVGCKWVFKIKRGPDGSIEKYKARLVAKGFTQVEGIDYTDTFAPVSKFA 1080          
BLAST of mRNA_F-serratus_M_contig7948.19238.1 vs. uniprot
Match: A0A060SSE0_PYCCI (Integrase catalytic domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SSE0_PYCCI)

HSP 1 Score: 55.8 bits (133), Expect = 2.210e-7
Identity = 27/63 (42.86%), Postives = 41/63 (65.08%), Query Frame = 0
Query:    1 MLGMVERLAYTQVARSKDKLVVGSKMLFKRNIGQDGKVEKYKCRLVAQGFWQVECVHYTEKYS 63
            +L   +   Y +V R +++ VV  K +F+   G DGK++KYK RLVA+GF QVE V YT+ ++
Sbjct:  987 LLSFAKAELYDEVERPRNRKVVDCKWVFRIKHGPDGKIQKYKARLVAKGFTQVEGVDYTDTFA 1049          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig7948.19238.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0C2WN23_AMAMK1.490e-951.85Integrase catalytic domain-containing protein (Fra... [more]
A0A2R6NNP3_9APHY3.680e-946.97Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A1C7MSU6_GRIFR9.580e-946.03Retrovirus-related Pol polyprotein from transposon... [more]
A0A4Y9XTU1_9APHY9.690e-946.15Integrase catalytic domain-containing protein n=1 ... [more]
A0A1X7TFD5_AMPQE1.570e-849.15Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A060SUY4_PYCCI3.380e-842.03Uncharacterized protein n=1 Tax=Pycnoporus cinnaba... [more]
A0A4S4N6A1_9APHY4.570e-845.76Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A8H7NTQ9_9APHY8.620e-846.67Integrase catalytic domain-containing protein n=1 ... [more]
A0A1M2VV58_TRAPU1.620e-745.00Retrovirus-related Pol polyprotein from transposon... [more]
A0A060SSE0_PYCCI2.210e-742.86Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 10..64
e-value: 1.1E-7
score: 31.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig7948contigF-serratus_M_contig7948:5698..5907 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig7948.19238.1mRNA_F-serratus_M_contig7948.19238.1Fucus serratus malemRNAF-serratus_M_contig7948 5674..6102 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig7948.19238.1 ID=prot_F-serratus_M_contig7948.19238.1|Name=mRNA_F-serratus_M_contig7948.19238.1|organism=Fucus serratus male|type=polypeptide|length=70bp
MLGMVERLAYTQVARSKDKLVVGSKMLFKRNIGQDGKVEKYKCRLVAQGF
WQVECVHYTEKYSSTAAAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2