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Homology
BLAST of mRNA_F-serratus_M_contig793.19227.1 vs. uniprot
Match: D8LC82_ECTSI (Haloacid dehalogenase (HAD) superfamily protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC82_ECTSI) HSP 1 Score: 335 bits (858), Expect = 9.110e-112 Identity = 158/219 (72.15%), Postives = 184/219 (84.02%), Query Frame = 1
Query: 91 TPRMGQSFNAQAVASIGRVFLRPALAVPHLSVDHVGMLDFSALREAGCKGVIFDKDNTLTSPYEDSLHPLVKEGVRQSLKVFGDAVCIMSNSAGTRDDRGYEDAVRIEAELGIPVLRHDEKKPGGVTDVLAFFKGKGPEGTDVRLEELCFVGDRLMTDVVFGNLHRMLTVHTKPLTLRGDNRPAVVFRFLERKMFLDFFHKICSVEPLVHAFFPSCCPE 747
TP MGQSFNAQAV+S+ RV PALAVPHLS+ H+G LDF L+ GCKGVIFDKDNTLT+PYED++HPLV+EG+++ ++VF +VCIMSNSAGTRDD Y DA+RIE LGIPVLRHDEKKPGG+ DVLAFF+GK PEG VRL+ELCFVGDRL+TDVVFGNLH MLTVHT+PLTL+GDNRPA VFR+LERK+F+ FFH+ CSVEP H CPE
Sbjct: 71 TPWMGQSFNAQAVSSMSRVVRHPALAVPHLSLAHIGRLDFEGLKAMGCKGVIFDKDNTLTAPYEDTVHPLVEEGLKRCMEVFEGSVCIMSNSAGTRDDPDYADAIRIETALGIPVLRHDEKKPGGIADVLAFFEGKDPEGGTVRLDELCFVGDRLLTDVVFGNLHGMLTVHTQPLTLKGDNRPAAVFRYLERKVFMGFFHQTCSVEPQAHRL----CPE 285
BLAST of mRNA_F-serratus_M_contig793.19227.1 vs. uniprot
Match: A0A6H5K9X3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9X3_9PHAE) HSP 1 Score: 326 bits (836), Expect = 1.630e-109 Identity = 155/216 (71.76%), Postives = 181/216 (83.80%), Query Frame = 1
Query: 100 MGQSFNAQAVASIGRVFLRPALAVPHLSVDHVGMLDFSALREAGCKGVIFDKDNTLTSPYEDSLHPLVKEGVRQSLKVFGDAVCIMSNSAGTRDDRGYEDAVRIEAELGIPVLRHDEKKPGGVTDVLAFFKGKGPEGTDVRLEELCFVGDRLMTDVVFGNLHRMLTVHTKPLTLRGDNRPAVVFRFLERKMFLDFFHKICSVEPLVHAFFPSCCPE 747
MGQSFNAQAV+S+ RV PALAVPHLS+ ++G LDF L+ GCKGVIFDKDNTLT+PYED++HPLV+EG+++ ++VF +VCIMSNSAGTRDD Y A+RIE LGIPVLRHDEKKPGG+ DVLAFFKGK PEG VRL+ELCFVGDRL+TDVVFGNLH MLTVHT+PLTL+GDNRPA VFR+LERK+F+ FFH+ CSVEP H CPE
Sbjct: 1 MGQSFNAQAVSSMTRVVRHPALAVPHLSLANIGRLDFEGLKAMGCKGVIFDKDNTLTAPYEDTVHPLVEEGLKRCMEVFEGSVCIMSNSAGTRDDPDYVHAIRIETALGIPVLRHDEKKPGGIADVLAFFKGKDPEGGTVRLDELCFVGDRLLTDVVFGNLHGMLTVHTQPLTLKGDNRPAAVFRYLERKVFMGFFHQTCSVEPQAHRL----CPE 212
BLAST of mRNA_F-serratus_M_contig793.19227.1 vs. uniprot
Match: A0A835Z207_9STRA (Mitochondrial PGP phosphatase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z207_9STRA) HSP 1 Score: 249 bits (635), Expect = 1.540e-78 Identity = 120/210 (57.14%), Postives = 158/210 (75.24%), Query Frame = 1
Query: 94 PRMGQSFNAQAVASIGRVFLRPALAVPHLSVDHVGMLDFSALREAGCKGVIFDKDNTLTSPYEDSLHPLVKEGVRQSLKVFGDAVCIMSNSAGTRDDRGYEDAVRIEAELGIPVLRHDEKKPGGVTDVLAFFKGK-GPEGTDVRLEELCFVGDRLMTDVVFGNLHRMLTVHTKPLTLRGDNRPAVVFRFLERKMFLDFFHKICSVEPLVH 720
P MGQSFN++AV ++G V P+LAVPHL++ ++ LDF+AL+ G +G+IFDKDNTLT+PY + LHP + +G R+ FG +VCIMSNSAGT DD +E A++IE LGIPVLRH EKKPGG+ +VLAFF+ + EG + R +LC +GDRL+TDVVFGNLH MLTVHTKPLTL+GDN+ A+V R++E ++F + H SVE H
Sbjct: 3 PWMGQSFNSKAVRTLGSVIRHPSLAVPHLALTNIAQLDFAALKAMGIRGIIFDKDNTLTAPYVEELHPAISDGFRRCQSHFGGSVCIMSNSAGTGDDVNFESAIKIETGLGIPVLRHREKKPGGLPEVLAFFRERCADEGIEAR--DLCVIGDRLLTDVVFGNLHGMLTVHTKPLTLQGDNKVALVARYIESRIFFNIVHARFSVEAPQH 210
BLAST of mRNA_F-serratus_M_contig793.19227.1 vs. uniprot
Match: A0A7S1ISK9_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1ISK9_9EUGL) HSP 1 Score: 244 bits (624), Expect = 3.060e-77 Identity = 124/208 (59.62%), Postives = 155/208 (74.52%), Query Frame = 1
Query: 103 GQSFNAQAVASIGRVFLRPALAVPHLSVDHVGMLDFSALREAGCKGVIFDKDNTLTSPYEDSLHPLVKEGVRQSLKVFGDAVCIMSNSAGTRDDRGYEDAVRIEAELGIPVLRHDEKKPGGVTDVLAFFKGKGPEGTDVRLEELCFVGDRLMTDVVFGNLHRMLTVHTKPLTLRGDNRPAVVFRFLERKMFLDFFHKICSVEPLVHAF 726
GQS+NA A+ ++GRV +P+LA+PH++V H+G LDF ALREAGCKG++FDKDNTLT+PY + +HPLV+EG+ + L+ F VCI+SNSAGT DD GYE A +IEA LG+PV+RH EKKP G+ DVL FF + E VR EL VGDRL+TDVVFGNL+ MLTVHT+PLTL GDN+ A V R LE +FL V+P VH F
Sbjct: 36 GQSWNANAMGALGRVAAQPSLAIPHVTVTHIGCLDFHALREAGCKGIVFDKDNTLTAPYVEEVHPLVREGLDRCLREFQGRVCILSNSAGTDDDEGYEAARKIEAGLGLPVIRHKEKKPAGLQDVLDFFHHQSGEA--VRPTELVMVGDRLLTDVVFGNLYGMLTVHTRPLTLEGDNKVARVIRPLETAVFLRLRG---VVKPPVHPF 238
BLAST of mRNA_F-serratus_M_contig793.19227.1 vs. uniprot
Match: W7U306_9STRA (Haloacid dehalogenase superfamily protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U306_9STRA) HSP 1 Score: 199 bits (507), Expect = 2.420e-58 Identity = 102/189 (53.97%), Postives = 130/189 (68.78%), Query Frame = 1
Query: 100 MGQSFNAQAVASIGRVFLRPALAVPHLSVDHVGMLDFSALREAGCKGVIFDKDNTLTSPYEDSLHPLVKEGVRQSLKVFGDA-VCIMSNSAGTRDDRGYEDAVRIEAELGIPVLRHDEKKPGGVTDVLAFFKGKGPEGTDVRLEELCFVGDRLMTDVVFGNLHRMLTVHTKPLTLRGDNRPAVVFRFLE 663
M QS N Q V +IG+V P+L +PH+SV H+G LDF LR+AG KGVIFDKDNT+T+PY D +H V S +VFG + I+SNSAGT DD G+ A+RIE+ LG+PVLRH KKPG + +VL FK + G D E+LC +GDRL+TDV++GN MLTVHT+ LT GDN+ A + R LE
Sbjct: 79 MVQSLNLQGVLAIGQVIRNPSLMLPHVSVKHIGFLDFELLRQAGIKGVIFDKDNTITAPYVDEVHEQVAGAFETSKRVFGPRKLIIISNSAGTLDDSGHAAAIRIESSLGVPVLRHAVKKPGAIPEVLEHFKKEC--GPDTTYEDLCIIGDRLLTDVMWGNFAGMLTVHTQILTPEGDNKVAAIVRRLE 265
BLAST of mRNA_F-serratus_M_contig793.19227.1 vs. uniprot
Match: A0A8J9RZH6_PHATR (Hypothetical protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9RZH6_PHATR) HSP 1 Score: 190 bits (482), Expect = 1.410e-56 Identity = 102/195 (52.31%), Postives = 130/195 (66.67%), Query Frame = 1
Query: 100 MGQSFNAQAVASIGRVFLRPALAVPHLSVDHVGMLDFSALREAGCKGVIFDKDNTLTSPYEDSLHPLVKEGVRQSLKVFG-DAVCIMSNSAGTRDDRGYEDAVRIEAELGIPVLRHDEKKPGGVTDVLAFFKGKGPEGTDVRLEELCFVGDRLMTDVVFGNLHRMLTVHTKPLTLRG----DNRPAVVFRFLERK 669
M QS N +A+ ++ V RP L VP LSV V ++F+AL++ G V+FDKDNTLTSPYE+ +HPL +G+ ++L+VFG D V I+SNSAGT+DD Y DA+RIE LGI V+RH+EKKPGG+ +VLA F P LC VGDRL+TD+VFGNLH MLTVH PL DN A + R +E K
Sbjct: 1 MVQSINTKALLTMASVLRRPGLMVPQLSVATVSQMNFTALKDHGIAAVMFDKDNTLTSPYENEIHPLAAQGIDEALRVFGRDRVAILSNSAGTKDDVDYTDAIRIENVLGIQVIRHEEKKPGGLDEVLAHFDLTDPA-------TLCMVGDRLLTDIVFGNLHGMLTVHCLPLCSGSENSKDNWTAKLLRPMENK 188
BLAST of mRNA_F-serratus_M_contig793.19227.1 vs. uniprot
Match: A0A448ZEQ0_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZEQ0_9STRA) HSP 1 Score: 190 bits (483), Expect = 4.060e-56 Identity = 100/196 (51.02%), Postives = 135/196 (68.88%), Query Frame = 1
Query: 100 MGQSFNAQAVASIGRVFLRPALAVPHLSVDHVGMLDFSALRE-AGCKGVIFDKDNTLTSPYEDSLHPLVKEGVRQSLKVFG-DAVCIMSNSAGTRDDRGYEDAVRIEAELGIPVLRHDEKKPGGVTDVLAFFKGKGPEGTDVRLEELCFVGDRLMTDVVFGNLHRMLTVHTKPLTL----RGDNRPAVVFRFLERK 669
M QS NA+A+A++ V P L VPH+SV +V L++ A++E AG + ++FDKDNTLT+PY+ ++H +G++++ ++FG + V IMSNSAGT+DD GYEDA IE LGI V+RHDEKKPGG+ +VL F P LC VGDRL+TDVVFGNLH MLT+HT PL R DN P+ + R++E K
Sbjct: 1 MVQSLNAKALATLAYVLRHPTLIVPHVSVANVSELNYRAMKECAGIRAILFDKDNTLTAPYDMTVHRDAAKGLKRAKEIFGAENVAIMSNSAGTKDDPGYEDAKMIEEALGIAVIRHDEKKPGGLDEVLKHFDVDDPA-------TLCMVGDRLLTDVVFGNLHSMLTIHTLPLCKGAENRQDNTPSKIIRYIENK 189
BLAST of mRNA_F-serratus_M_contig793.19227.1 vs. uniprot
Match: A0A7S2RNF6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RNF6_9STRA) HSP 1 Score: 182 bits (463), Expect = 6.780e-54 Identity = 95/180 (52.78%), Postives = 128/180 (71.11%), Query Frame = 1
Query: 100 MGQSFNAQAVASIGRVFLRPALAVPHLSVDHVGMLDFSALRE-AGCKGVIFDKDNTLTSPYEDSLHPLVKEGVRQSLKVFG-DAVCIMSNSAGTRDDRGYEDAVRIEAELGIPVLRHDEKKPGGVTDVLAFFKGKGPEGTDVRLEELCFVGDRLMTDVVFGNLHRMLTVHTKPLTLRGDN 633
M QS NA+A+ ++ V RP LA PHL VD + ++F+A+R+ G + VIFDKDNT+T+PYE ++H G++ +L VFG + V I+SNSAGT+DD GYEDA++IE E+GIPV+RHDEKKPGG+ +VL F E D +LC VGDRL+TDVVFG+L+ MLT+H PL +N
Sbjct: 1 MVQSINAKALVTLASVIRRPYLASPHLHVDSISDVNFTAIRDKCGIRAVIFDKDNTITAPYETAVHSKASFGLQSALDVFGSENVAILSNSAGTKDDPGYEDALKIEMEMGIPVIRHDEKKPGGLQEVLNHF-----ENVD-DASQLCMVGDRLLTDVVFGSLYGMLTIHCLPLCEGEEN 174
BLAST of mRNA_F-serratus_M_contig793.19227.1 vs. uniprot
Match: A0A6V3JXN8_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A6V3JXN8_9EUKA) HSP 1 Score: 185 bits (469), Expect = 1.180e-53 Identity = 96/210 (45.71%), Postives = 133/210 (63.33%), Query Frame = 1
Query: 97 RMGQSFNAQAVASIGRVFLRPALAVPHLSVDHVGMLDFSALREAGCKGVIFDKDNTLTSPYEDSLHPLVKEGVRQSLKVFG-DAVCIMSNSAGTRDDRGYEDAVRIEAELGIPVLRHDEKKPGGVTDVLAFFKGKGPEGTDVRLEELCFVGDRLMTDVVFGNLHRMLTVH-TKPLTLRGDNRPAVVFRFLERKMFLDFFHKICSVEPLVH 720
++GQS N A+ S+ RV +P+L VPH+SV HVG +DF+AL+ +G + V+FDKDNTLT+PY HPL K + ++ FG + V IMSNSAGT DD Y +A +E LG+PVLRH KKPGG ++ A + G + +++C +GDRL TDV+FG LH +LTVH T+ L GDN A + LE + L + V+P+ H
Sbjct: 53 KLGQSLNMDAIGSLARVLRKPSLLVPHVSVPHVGHMDFAALKASGIRAVVFDKDNTLTAPYSLEPHPLTKPAFAKCVEEFGAENVIIMSNSAGTNDDAEYREAKIVEDALGVPVLRHSAKKPGGFDELTAHYNGA------LTPDQICIIGDRLFTDVLFGTLHGLLTVHVTQSLKHEGDNVLARAIKALENGILLRLLQGV-GVKPIYH 255
BLAST of mRNA_F-serratus_M_contig793.19227.1 vs. uniprot
Match: A0A7S0GVI2_9EUKA (Hypothetical protein n=2 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0GVI2_9EUKA) HSP 1 Score: 183 bits (464), Expect = 1.090e-52 Identity = 93/207 (44.93%), Postives = 137/207 (66.18%), Query Frame = 1
Query: 97 RMGQSFNAQAVASIGRVFLRPALAVPHLSVDHVGMLDFSALREAGCKGVIFDKDNTLTSPYEDSLHPLVKEGVRQSLKVFG-DAVCIMSNSAGTRDDRGYEDAVRIEAELGIPVLRHDEKKPGGVTDVLAFFKGKGPEGTDVRLEELCFVGDRLMTDVVFGNLHRMLTVHTK-PLTLRGDNRPAVVFRFLERKMFLDFFHKICSVEP 711
++GQ+ N +A+ S+G V +P++ VPH+S +V + F AL+ AG K V+FDKDNT+T+PY LH ++G+ ++ K+FG + V +MSNSAGT DD G+ +A IE ELG+PVLRH EKKP G+ ++ A F GK + E+C VGDR++TDV+FG+L+ +LT+H PL ++ DN+ A +R +E L KI V P
Sbjct: 68 KLGQNLNMEAIRSLGSVLRKPSVMVPHISTPNVNSIPFRALKSAGIKVVVFDKDNTITAPYSFELHDTARKGLAEAQKLFGKENVILMSNSAGTLDDDGFREADIIEHELGLPVLRHKEKKPKGMPELTAHFTGK------IEPAEMCIVGDRVLTDVLFGSLNGLLTIHVSDPLDVKSDNKMARFWRVVENSFLLPIL-KILGVGP 267
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 332.8 |
| Seed ortholog evalue | 1.2e-88 |
| Seed eggNOG ortholog | 2880.D8LC82 |
| Preferred name | GEP4 |
| KEGG rclass | RC00017 |
| KEGG ko | ko:K01094 |
| KEGG Reaction | R02029 |
| KEGG Pathway | ko00564,ko01100,map00564,map01100 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005975,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006793,GO:0006796,GO:0006996,GO:0007005,GO:0007006,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008962,GO:0009058,GO:0009987,GO:0016043,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019637,GO:0031974,GO:0032048,GO:0032049,GO:0042578,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044262,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045017,GO:0046471,GO:0046474,GO:0046486,GO:0046838,GO:0061024,GO:0070013,GO:0071704,GO:0071840,GO:0090407,GO:1901576 |
| EggNOG free text desc. | phosphatase |
| EggNOG OGs | COG1011@1,KOG2961@2759 |
| Ec32 ortholog description | haloacid dehalogenase (HAD) superfamily protein |
| Ec32 ortholog | Ec-20_004780.1 |
| EC | 3.1.3.27 |
| COG Functional cat. | H |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01000 |
| Exons | 7 |
| Model size | 919 |
| Cds size | 663 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622932359.21785-UTR-F-serratus_M_contig793:186198..186355 | 1622932359.21785-UTR-F-serratus_M_contig793:186198..186355 | Fucus serratus male | UTR | F-serratus_M_contig793 186199..186355 - |
| 1690964270.0984995-UTR-F-serratus_M_contig793:186198..186355 | 1690964270.0984995-UTR-F-serratus_M_contig793:186198..186355 | Fucus serratus male | UTR | F-serratus_M_contig793 186199..186355 - |
| 1622932359.3742077-UTR-F-serratus_M_contig793:188295..188314 | 1622932359.3742077-UTR-F-serratus_M_contig793:188295..188314 | Fucus serratus male | UTR | F-serratus_M_contig793 188296..188314 - |
| 1690964270.1771955-UTR-F-serratus_M_contig793:188295..188314 | 1690964270.1771955-UTR-F-serratus_M_contig793:188295..188314 | Fucus serratus male | UTR | F-serratus_M_contig793 188296..188314 - |
| 1622932359.3915746-UTR-F-serratus_M_contig793:195126..195206 | 1622932359.3915746-UTR-F-serratus_M_contig793:195126..195206 | Fucus serratus male | UTR | F-serratus_M_contig793 195127..195206 - |
| 1690964270.185406-UTR-F-serratus_M_contig793:195126..195206 | 1690964270.185406-UTR-F-serratus_M_contig793:195126..195206 | Fucus serratus male | UTR | F-serratus_M_contig793 195127..195206 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622932359.2358823-CDS-F-serratus_M_contig793:186355..186448 | 1622932359.2358823-CDS-F-serratus_M_contig793:186355..186448 | Fucus serratus male | CDS | F-serratus_M_contig793 186356..186448 - |
| 1690964270.1107361-CDS-F-serratus_M_contig793:186355..186448 | 1690964270.1107361-CDS-F-serratus_M_contig793:186355..186448 | Fucus serratus male | CDS | F-serratus_M_contig793 186356..186448 - |
| 1622932359.2581606-CDS-F-serratus_M_contig793:186788..186941 | 1622932359.2581606-CDS-F-serratus_M_contig793:186788..186941 | Fucus serratus male | CDS | F-serratus_M_contig793 186789..186941 - |
| 1690964270.122275-CDS-F-serratus_M_contig793:186788..186941 | 1690964270.122275-CDS-F-serratus_M_contig793:186788..186941 | Fucus serratus male | CDS | F-serratus_M_contig793 186789..186941 - |
| 1622932359.2764468-CDS-F-serratus_M_contig793:187209..187348 | 1622932359.2764468-CDS-F-serratus_M_contig793:187209..187348 | Fucus serratus male | CDS | F-serratus_M_contig793 187210..187348 - |
| 1690964270.1334598-CDS-F-serratus_M_contig793:187209..187348 | 1690964270.1334598-CDS-F-serratus_M_contig793:187209..187348 | Fucus serratus male | CDS | F-serratus_M_contig793 187210..187348 - |
| 1622932359.3062735-CDS-F-serratus_M_contig793:187547..187669 | 1622932359.3062735-CDS-F-serratus_M_contig793:187547..187669 | Fucus serratus male | CDS | F-serratus_M_contig793 187548..187669 - |
| 1690964270.1438057-CDS-F-serratus_M_contig793:187547..187669 | 1690964270.1438057-CDS-F-serratus_M_contig793:187547..187669 | Fucus serratus male | CDS | F-serratus_M_contig793 187548..187669 - |
| 1622932359.3253274-CDS-F-serratus_M_contig793:187823..187935 | 1622932359.3253274-CDS-F-serratus_M_contig793:187823..187935 | Fucus serratus male | CDS | F-serratus_M_contig793 187824..187935 - |
| 1690964270.154246-CDS-F-serratus_M_contig793:187823..187935 | 1690964270.154246-CDS-F-serratus_M_contig793:187823..187935 | Fucus serratus male | CDS | F-serratus_M_contig793 187824..187935 - |
| 1622932359.3519523-CDS-F-serratus_M_contig793:188251..188295 | 1622932359.3519523-CDS-F-serratus_M_contig793:188251..188295 | Fucus serratus male | CDS | F-serratus_M_contig793 188252..188295 - |
| 1690964270.1668587-CDS-F-serratus_M_contig793:188251..188295 | 1690964270.1668587-CDS-F-serratus_M_contig793:188251..188295 | Fucus serratus male | CDS | F-serratus_M_contig793 188252..188295 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig793.19227.1 >prot_F-serratus_M_contig793.19227.1 ID=prot_F-serratus_M_contig793.19227.1|Name=mRNA_F-serratus_M_contig793.19227.1|organism=Fucus serratus male|type=polypeptide|length=221bp
MGQSFNAQAVASIGRVFLRPALAVPHLSVDHVGMLDFSALREAGCKGVIF DKDNTLTSPYEDSLHPLVKEGVRQSLKVFGDAVCIMSNSAGTRDDRGYED AVRIEAELGIPVLRHDEKKPGGVTDVLAFFKGKGPEGTDVRLEELCFVGD RLMTDVVFGNLHRMLTVHTKPLTLRGDNRPAVVFRFLERKMFLDFFHKIC SVEPLVHAFFPSCCPERLAG* back to topmRNA from alignment at F-serratus_M_contig793:186199..195206- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig793.19227.1 ID=mRNA_F-serratus_M_contig793.19227.1|Name=mRNA_F-serratus_M_contig793.19227.1|organism=Fucus serratus male|type=mRNA|length=9008bp|location=Sequence derived from alignment at F-serratus_M_contig793:186199..195206- (Fucus serratus male) TTCGCAGGGGACTCGAAGGGTTTGAGAAGCGGCGACGACGGTAGCAGTCC
GTTCACGTCCTCACACTCGATTCGGAAGAGGTGCGATGATGGCTCACGCA
AATGTGTCGGTGGTGCGCTGCTGATACCGAAAGAAATAGTTGTAAAATGA
TCATGGGCTGCCGATTTGCGCCATACCTTTCCGCTGTTGTCGTAGTGGTT
TTGAATCTTCCTCGCCCACGTCGGCGTACTTCTTGCTGTAAAATTTACTT
TTACGTACCTACCAGTATTAATAAGATGTTCGTGTGAATAATATCTTGAT
CTGTGCTTTCTATTACCGAACCGAACCGAATACATCCGCAGGTGCCTGTA
TCGTCAACCAGAGTAATTTTACTTAATGTACTTAGTATGTATAGCAAGAG
TATGGATCAACCGGGTAAGGTTGCCAATCCTGCTCGTGGTCAGCTGAACA
GGGAAAAGAATATTCCCCTGTCCGCGTTCGTGCCTGAGAATTTGGTCTCG
TGAGACGGTTTCGGCAGTCCCGTCCCGCGTCAGCCTGCTCATCTCCATAC
TCAAGATGAATCTGGTGCTTACTTACGGGATCCCTCCCGAGTTCCGCGGC
GGCGCCCATATATTTATTTCAAACCGCCATACGCCATCGGGTAAGTCCCG
AGTTTATCGGGTCACGCAATTGCGTACCGATGGCGTTCACTGCCGAGAGT
CCGCCGGCACAGGGCCAGTAAACCTCAAGGTAGTTCCGAACGAGTGCTGC
TGCCTTAGCAAGTCACCATGGACCAATTAATACACGCCTCTCTTTCCCAC
ACCCACTATTGGTATGAAGTGGGCATGTTGAAAGTACCGGCTGGCCGCCA
TCGAATACGCTGAATGTAATCGAATGACACCGCGCGATATAATTTGTTGT
GCTGGCAATCTGCATCAACCGTGTAACCAAACGCTTCCAACTTAACCTAT
AGGTTTGTATGTATATGTATGTATTTATCGTCAGTACTTTCAGCAGAGTA
TGGATCAATCGGGTATGGTTGCCATAATTCTGCTCAGGGGAAAATTATTC
TACTACTAAAGCACTACCAGGTATTATATGTATGGTCATCACAGATAGCA
AAGTATGGATCAACCGGGTAAAGTTACCAATCCTGCTATTAATAGTGGTC
AGCTGAACAGGAGAAAATGAAAATTCCCCTGTCCCCGTACACGCCTGAGA
ATTTGGTCTCGCGAAACGGGTTCAGCCGTCCCGTCCCGCATCAGCCGGCT
CATTCTCCATACTCAGACTAAATCTGGTGCTTACTCACGGGATTCCCGAT
TTCCGCGGCGGCGTCCGTTTATTTATTTAAACCGCCATACGCCATCGGGT
CAGTCCCGAGTTTATCGGGTCACGCAGTTGCGTACTGATGGCGTTCACTG
CCGAGAGTCCGCCGACACAGGGCCAGTAAACCTCAGAGCAGTTCCAGTAA
TGGGTGCTGCCATTTTGCAGATCGCTATGGACCAATTAATATGCGCCTCT
CTTTTCCCACACCCACTATTGGTATGATGTGGGCGTGTTGATAGATAGAA
TGGCGATATTACGTGTTTGGGAGACCAGTTTTTGTTTGCTTGACATTCCC
CCTTTTTATCAGTTCTGTGGGTGAACCATTGTGGTGTCTTATGTATTTGG
TACAGGATGGGGACCGAGGTACAATTACAATAATATATCGGTTTTCATGC
TCGTCTGACATGTGTTCATGTCGAGCCCGCTCAACCAACGCCCAGCACAG
CACCACCTCTGCCGTGTGAGACCCATCCTGCTCAGAGACCTTGCATTGCA
CCAGTGGTACCCACTCCAATACACTATTATAGTGGATGATTAAGTGATGG
TTTCTAGAGCTTGGGGGGCATCGAGTGGAGATTGTTGTGTTTTGTGTAAT
TTGGGAATTTCTGGGATACTTCAACTTTGTGAAGAAAAGCGCGAGCTTAG
GATGAAGCGCCACCCTGCGGTAGTAGGGAGACTACCGGTCGGCAGTAAAG
TGCATTGCCGGAGAAGCAACCGGCCGCTCGAGCGCGAGGATCTCGTGACC
AGGGCAGCCGGGATTTGGGGTACTGTAACCCGGAGTGAACGGGACGCTGT
ACCCACTTGTCAGAGAGCAGGAACATCATTGGCTCGGTCGACTGCGCCAG
GGGAGCGCTAGTACGTCAAGTACCACCGGCCGAAGAACCGGCCGAGAGCG
CTGCGAAGAAGCGCCAGTGTGATACGAGCCACCGGTCGAAGGAGCGCGAT
GAATGTGCCACCAGAACATCAGCCGAGGAAGGCGATAACCTGGAAAAGAA
CAACAACGATTCCACGACCCAGCCTGAAGAAGGACAGCTGGGCAGAACTT
TGGCTGTTTTTTTAAAGATTGCTGTAGAGCTCACCGCCCAGACGCCAGCG
ATCGAGAGCGCCGCAAAGGAAAGCGCCCGTGCGGAGAAGACCCCGATCGG
GGGAAGAAGCGTCGCGAGAGCCGCTATTGCCAGGGAACCCGAGGGGACCT
GGACTACGAGAGGCCGCACTGAGTACGGCTACTTGCAGCGGACTACAGGT
CAGGTAAACGCGGGTTACACAGTGTTTTTCATCTGATTTTAAAAATGTCT
ATCGAGGAGAGCGATGTCAGAAACATCATCGCTGAAGTTTTAATAGAAGC
AACAAGTTGGCGCCTACGCGAATGTATTCGGGTCAGGGAGCTTGCCACGA
TGCATAGACTAGGGCAAATGCGTCGTTTGCAGAGGCTCGAGAAGCAGAAG
GCCTGGAAGCGACAGGCCGTCTTCGACCGTATCGAGATAGCAACCGAAAT
GAATGCACAGCGTTTTCATACCAGCCTTGTTTCAGAACTTTTCTACAGCA
AGCTGTCCAGTGCGAGATGACCCCATAGTCCCGACGAATACACGCTTGGA
ATGAGAGTTGACGGCGAGCGACTTAGAATGTAAGTTGTCCTTTCGCAGCT
TGCACCGCCGCCGCATTGTGATTCATCGCCGCGACGGGCGCCCGCGGACG
ATACGAGGTCGGATGAACCCGGAACGCCGCAAGCGGAGAGTCAGTAAATC
GAGAGGGAAGGGATTTTTCCTCTTCGAGCCAGTGGGGAGAGTTTTTTACA
CGTCAGTACAAGCCTGGACCAGGAGGGTGCCATAAGTTTGCTCCAAACAG
ACGTCGGGGTAGACGACAACGACGAAGCAACAACTTCAAAAGCAAAAGCC
GGCGCTCGCAAGAAGTTTGCTGGACTGCCGATTGGCCGGCAACAACGAGA
GACGGCTGAGACTGAACAAAGCAAGCAGTTCGACCCTGGAGGGTGATGGA
GGAACCATTACTTTCCTGTCGAGAGGAATATCTTCTCGCGTATACTGTTT
GCTCGTTTTTCTCTTGTTGTAATTCTTATGTCCTGTCCGAAAAGCAGGTA
CGAGAGGCGAGGGTGATTTTCACTCAAGGATGCGGGAGCGATTGGGATAC
AAACCAGATGCGTGAATTGCTGTATCAGGACAGGAGCGCGCATCGGCATC
TCGAATTGCGTTAACGAAGGGTATAGTCTGTACCACGTCGTTCCTTTTGT
CCGCCTCACGTAGTACTGTTCTTTTACGGTACTGCATTGCTTTTAAGATG
ATGGGTCGTTTTTTGTATCAACTCATGATGTCGACTGATAGGTAGTACTG
AAATCCATATATTTGAAATATAATATGATTTTTCGGAAAATAAATATCTA
CGTTTGGAATACGTAATACCGTACTCTCGAAAAAACAGCGTAGATTACGA
AACTGTCTTCGCGGGTATGGTAGGATGTTAAACTGTTTTGACCGTTGTCG
TAAGATGAATTGCGTTGTGCGCGAGTTAGAAACGACCCGTACAAGGTCAT
CAGTTTTCCGATATATTGTGAATCTACGAGCAGAAATGAAATGCAGCAAG
TAGCCGTTGGGGTATGGATAACGATCGAGTAGTGATGATATACATTTTCC
TGTTGATGGGATACATCGACAGTTGGAAGTCTGAGTTATGTAGAGTAGAG
AGAAAGGGAAATGATCAAGTTTGACGGTTTCCGAATGTTCCGAATTTAGG
AATCGGGGAGGCTGAACGAAGTCGATTCCGAAATGCGGATAGATTAAAAG
ACTATTCTGTCCAATAGGATGCTGTGATAGTTTCAGTAGTTTCGATCTAC
GATACGTGTTTGGGAGACCAGTGTTTGTCTGCTTGACTTTCCCCCTTTTG
GTCAGTTCTGTAGGTGAACCATTGTAGTGTCCCACGTATTTGGTACCCAA
GATGGTGACCGAGGTACAATTACAACAATGTACCGGTTTTTATACTCGTC
TGACATGTGCGCATGTCGAGCCTGCTCAACCAATACCCAGCACAGCACCA
CCTCTCCCGTGTGAGACCCATCCCGCTCAGAGACCTCCCATTACACTAGT
GGGGAACCTGACAGCAAGGGACACCACTCGATTAGGATCAACCGGGTAAG
GCTGCCAATCCTGATCGTGTTCAGCTGAACAGGGAAATTGAATATCTCCC
TGTCCGCGTTCGCGTCTGAGAATTTAGTTTCGCGGGACTGGTTCGGCAGT
CCCGTCCCGCGTCAGCCTGCTCATCTCAATGCTCAAGCTGAATATGTTGC
TTACCTACGGGATTCCTCCCGAGTTCTGTATCAAGTAGTTTGCAAAACAA
TACCTACTGGGTAATTACTGTACTGTATTTATTTTGCTTTGTAAAGAACA
TAATTAGATAAAGACTCACTGTATTTTCGTTTCGTTGTTATTATAGGGTT
GTCGCTATGGGACTACTATTATACTATAGCAAATGTTACACCGGACTCCG
ATTCACCCATACTTCACCCCGATCCTACACACCTGAACCCGATCCCAAAC
CCATTATCACATTACTAAATACCAAGTCCATCGTGTATTTTTGCCTCTAT
TTTGGTGGACCTGCATGGCGATTAATATTGCAGTATAACGGTGGGGTTTT
CCCCGATATGATACTGTCGACCCTATGCTACTGCCATTGGGGAACCCGTT
TGAATAGCGTAAGAGTTTTTGTCCTTGTAGCCAATGTTCCCACCTAAGCG
TTTTGACAAATTTCTCTCCTTACTGGATGGATGCTCGGAAGATTTAGATG
CGTTCAGATTTCCCTTTAAGCACTTTCCCTGTCCCCGTTCGCGCCTGACA
ACTTGGTTTCGTGAGACGGGTTGGACTGTCCCGTCCCGCGTCGGCCTGCT
CATTCTCCACGCTCGGGCTGAATCTGGTACTTACTCACGGGATTCCTCCC
TCTTTCCGCTACGGCGTCCATTGGTCCATTTATTCATACCGTCAACCGCC
ATCGGACCAATCCCGAGTTTTATCAGGCCACGCAATTGCGCACCGATGAC
GTTCAGAGTGGAATCCCGTGAGTACGCACCAGATGCAGCCTGAGTATGGA
GAATACGCAGGCTGACGCGGAACGGGATGGCTGGACCTGTCTCGCGAGAC
CAAATTCTCAGGCGCGAACGGGGACAGGAAAAACTTCATTTTTACTGTTG
TTCAGCTGATCACTATTATAGCAGGATTGGCTACCATACCCGGTTGATTC
ACACTTTGCTTTAGGGGAATATTCATTTTCCCTGTTCAGCTGACCACGAG
CAGGATTCGCAACCTTACCCGGTTGATCAATACTCTGCTATATGTGATCA
CCATACATAGAAGTGATGACCATACATGTATACATACATATTGCCGAGAG
TCCGCCGGCGCAGGGCCAGTATTCCTCAAGGCAGTTCCAGTAACGGGTGC
TGCCTTTTCAGGCATCACCATGGACCAATTTTTATGCACCTCTCTTTTCC
CACACCCACCTCGAGTATAGTATAGTATAGTATAGTACAGTATACTGGAC
ATACGCGATACAAAAGGTACCGGAGGCGGTATGAAATGCCAAAACTCGTA
TTTTGTTTGTAGAACGGATTGTACTGAAGCGACGTATCCAGAGGCGGATC
TCATTCGCACGGTGCTGCACGACGTTAGTTTTGTGCGTGTGTCGACGTTG
GCGATAGTTGTAAGTGTACAGCCGGTTCTTTCAGTATGCCCGCTTCATAC
CAATAGGGGGTGTGGGAAAGAGAGGCGTATATCAATTGGTCCATGGTGAC
CTGCCAAGGCAGCACTCGTTCGAAACTACCTTGAGGTTTATTGGCCCTGT
GCCGGCGGGCTCTCGGCAGTGAACGCCATCGGTACGCAATTGTGTGACCC
GATAAGAGTGACCCGATGGCGTATGGCGGTTTAATATAAATATATGGACA
CCGCTGCGGAACTCGAGAGCAATCCCGTAAGTAAGCACCAGGTTCAGCCT
GAGTATGGAGATGAGCAGGTTGATGCGGGACGGGGCTGCCGAAACCGTCT
CACAAGACCAAATTCTGAGGCGCGAACGCGAACAGGGAAATAGCAGTCTT
CCCTGTTCAGCTGACCACGTGCAGGATTGGCAACCTTACCCGGTCGATTC
ATGCTCTTAATGTTTCCAACTAAACGTTTCGACACATTTTCCCCCCGACA
GGGTAGATGCTCGGAAGGTTTAGATGCGTTCATACCAACCCCTGGTTGAC
TAAGCGTGTGTTAGGCGTGAACCGGGAAGAGATGATTCAAATGATCTTTA
ATGGCCGCAGACGGAAAGATTCGTAGTCTTGAACGTTGATTGTCTCAAAC
GTTGATAGTGGCATATTGATTGACTTCATCGACAGGTCTCCCCCGGTTAC
TCCAATTTTACAATAACGCACCATTACACGGCTGCAAAAGCACTAACCGT
TCGACTCTCAGCATACATCACTTCTATCGGCAGCGCTACCACTGCCTTTT
CCCAAGGAACCATCTGGACTATACGCAGTGTGTGTCGCGTTGAATCCCGT
CCCATCCTGACATACCTGCTGATATTTCCTCGGTTACTCCAGATTTCACG
GGACTCCGCGGATGGGACAGAGCTTCAATGCGCAGGCGGTAGCCTCCATC
GGAAGGTAGATGCGCACGGGGTACGAGAACGCTGTTGAGAATATACGTTC
GTGGGCTGTATTCAGGCTTCAGTAGCCTATATAGAAAGAGAAAATCGCGC
ATCCAACAACGGCATATAATAATACCCTTCCAAGTACTGCACTGGACGCG
GTCGTAAGGCTATTTTAATTCCAAGCGGCGAGGTATCGTACAACAGCCAA
AGATGTCGATAAAATTCCATAGGGGAAACCTATAAGGAAGAGGTAGCTAG
CCAGAGATGGTATGCTGCCCCTTCATCCGATCATTTCTCGCATGCCTACC
GTTGCATCAATCGCCCGAAAGGGTTTTCCTACGTCCTGCTCTGGCGGTGC
CACATCTGTCCGTGGATCACGTCGGGATGTTGGACTTTTCGGCTTTGCGC
GAGGCGGGCTGCAAGGGAGTTATCTTCGACAAGGTAATAAGCGCGCTCAA
GTAGTTTCACTTTCGTTCTATTACAACCCCGTAGAGCTAGCCGTGATCTC
ACGGGGCATGGAGGAAATTCGCCCTAATTATTTTGCGTTGCTTTCGCCAA
TGACCGGCAACATGTGCCTGCGACGGGCCTGTAACAGGACAACACCTTAA
CCTCGCCGTACGAGGACAGCTTGCACCCCCTCGTGAAGGAAGGCGTCCGA
CAATCTTTGAAGGTGTTTGGGGACGCCGTGTGCATCATGTCCAACTCCGC
CGGCACCCGGTGCGTGCGGCCTTCGGCGTGATCGTCATTGCTCAATGCGC
TAACGTTTGATTTCATCCCAACCACGTATTGTGTGTCTGGGCGCGTTACG
CCCCTCTGGCAAGCCCATCTAGCTTAGGGACGTGTTCGTCCTTCGCCCGG
AGCACTCTCATGCCCGAAAACATTGGGCGTTTTCCCCACTCGACGCGGCC
TTTCTCAGGGACGACCGAGGGTACGAAGATGCCGTTCGCATCGAGGCCGA
GCTCGGCATTCCAGTGCTAAGACACGACGAAAAGAAGCCAGGAGGTGTGA
CGGACGTGCTGGCGTTCTTCAAGGGAAAGGGGCCGGAGGGTACAGACGTG
AGGATTGCCTTCGCTGTAACGTTTTTTCGTGGCGTCAAGTAGGCGTGCAA
AGCAAGCACTTATGTGGAGCGGGGTGTGACTCAAACTATCCGACCGCACG
TTGCTGGTTTTTTTTTCTAGCGCAGAGGCATCAAAAACGGAAAATGCCGC
TCGAATCTCACGGTTGGGATTTGTCCGCAGCTGGAGCCTGACGCGAGGAG
AAGACGCTCCGTCGAATTGCCCTCGACGACCGTGTGCCGTTACGTTTCTC
GCATGCACCCTCCAGGTTCGGTTAGAAGAGCTGTGCTTTGTGGGAGACCG
ATTGATGACAGACGTGGTATTCGGAAACCTCCACAGGATGCTGACAGTGC
ACACCAAGCCTCTGACGCTCAGGGGGGACAATCGACCGGCAGTCGTCTTC
CGCTTTTTAGAGAGAAAGGTATTATTAATCAAGAAAGGAGGCGACGTTTC
TCCTTGTTACATAGCATCCTCGAGAATCCCAGTCCCTTCATCCTCGTGGT
ATATGTTATGATACGCCGGGTCTATCGCATATCAACTGCACTGTGCTTTT
AGATTCACGCTACATGTATACCGGTGATGAGGAAAAAACCGTTTGAGATT
AAATGTGATGTGATACGTAAGCTACACCCCAAGTAAATGGTGAGCATTCT
GTACGTTTAGGGCGCTAACCAACGTGTGGCGGAGGCGATGGTTGAAATTC
AAGCTTTTCACAAAACTTTCCCTTCCCTTTGCCCCGCGTAATACCTGCCA
CCTGCCAGATGTTCCTGGACTTTTTTCACAAGATCTGCTCTGTAGAGCCG
CTGGTGCATGCATTTTTCCCCTCGTGTTGCCCAGAGAGATTGGCCGGCTG
ACTTGAGCTAACACGTCATATTTCGCGTGACTTTGGATGGTTATCGTGAC
ACTCCAAACACACCCACTCGTGATTGTTGGATTGCCCCATAGAAAATGCG
TTGCTACAATTGAGATATGAATACCCTCGTGCATCGATTACAATTGTTGC
CTCGGGGA back to topCoding sequence (CDS) from alignment at F-serratus_M_contig793:186199..195206- >mRNA_F-serratus_M_contig793.19227.1 ID=mRNA_F-serratus_M_contig793.19227.1|Name=mRNA_F-serratus_M_contig793.19227.1|organism=Fucus serratus male|type=CDS|length=1326bp|location=Sequence derived from alignment at F-serratus_M_contig793:186199..195206- (Fucus serratus male) ATGGGACAGAGCTTCAATGCGCAGGCGGTAGCCTCCATCGGAAGATGGGA CAGAGCTTCAATGCGCAGGCGGTAGCCTCCATCGGAAGGGTTTTCCTACG TCCTGCTCTGGCGGTGCCACATCTGTCCGTGGATCACGTCGGGATGTTGG ACTTTTCGGCTTTGCGCGAGGCGGGCTGCAAGGGAGTTATCTTCGACAAG GGTTTTCCTACGTCCTGCTCTGGCGGTGCCACATCTGTCCGTGGATCACG TCGGGATGTTGGACTTTTCGGCTTTGCGCGAGGCGGGCTGCAAGGGAGTT ATCTTCGACAAGGACAACACCTTAACCTCGCCGTACGAGGACAGCTTGCA CCCCCTCGTGAAGGAAGGCGTCCGACAATCTTTGAAGGTGTTTGGGGACG CCGTGTGCATCATGTCCAACTCCGCCGGCACCCGGACAACACCTTAACCT CGCCGTACGAGGACAGCTTGCACCCCCTCGTGAAGGAAGGCGTCCGACAA TCTTTGAAGGTGTTTGGGGACGCCGTGTGCATCATGTCCAACTCCGCCGG CACCCGGGACGACCGAGGGTACGAAGATGCCGTTCGCATCGAGGCCGAGC TCGGCATTCCAGTGCTAAGACACGACGAAAAGAAGCCAGGAGGTGTGACG GACGTGCTGGCGTTCTTCAAGGGAAAGGGGCCGGAGGGTACAGACGGACG ACCGAGGGTACGAAGATGCCGTTCGCATCGAGGCCGAGCTCGGCATTCCA GTGCTAAGACACGACGAAAAGAAGCCAGGAGGTGTGACGGACGTGCTGGC GTTCTTCAAGGGAAAGGGGCCGGAGGGTACAGACGTTCGGTTAGAAGAGC TGTGCTTTGTGGGAGACCGATTGATGACAGACGTGGTATTCGGAAACCTC CACAGGATGCTGACAGTGCACACCAAGCCTCTGACGCTCAGGGGGGACAA TCGACCGGCAGTCGTCTTCCGCTTTTTAGAGAGAAAGGTTCGGTTAGAAG AGCTGTGCTTTGTGGGAGACCGATTGATGACAGACGTGGTATTCGGAAAC CTCCACAGGATGCTGACAGTGCACACCAAGCCTCTGACGCTCAGGGGGGA CAATCGACCGGCAGTCGTCTTCCGCTTTTTAGAGAGAAAGATGTTCCTGG ACTTTTTTCACAAGATCTGCTCTGTAGAGCCGCTGGTGCATGCATTTTTC CCCTCGTGTTGCCCAGAGAGATTGGCCGGCTGAATGTTCCTGGACTTTTT TCACAAGATCTGCTCTGTAGAGCCGCTGGTGCATGCATTTTTCCCCTCGT GTTGCCCAGAGAGATTGGCCGGCTGA back to top
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