mRNA_F-serratus_M_contig792.19215.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig792.19215.1
Unique NamemRNA_F-serratus_M_contig792.19215.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig792.19215.1 vs. uniprot
Match: D8LK93_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK93_ECTSI)

HSP 1 Score: 119 bits (297), Expect = 5.710e-29
Identity = 65/101 (64.36%), Postives = 79/101 (78.22%), Query Frame = 3
Query:  297 YPSHIRQ---RESVGVEEDSVDSR-EEGYDG-DRVRLLVGSFNVGNSPITDLAPWLPYGGKGYDLIVVGLQESTYWAPRGSRESPP-NGTSSLSPTNSVSP 581
            YPS++R     +  G +++  +   E GY+G DRVRLLVGSFNVGNSP+TDLAPWLPYGGKG+DLIVVGLQESTY  PRG+R+S P   T SLSP+NS+SP
Sbjct:   61 YPSYVRPPPGADDGGKQQEGQERETERGYEGGDRVRLLVGSFNVGNSPLTDLAPWLPYGGKGFDLIVVGLQESTYRPPRGARDSSPFQRTLSLSPSNSLSP 161          
BLAST of mRNA_F-serratus_M_contig792.19215.1 vs. uniprot
Match: A0A7S3YA27_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YA27_HETAK)

HSP 1 Score: 65.5 bits (158), Expect = 9.560e-10
Identity = 24/44 (54.55%), Postives = 36/44 (81.82%), Query Frame = 3
Query:  375 GDRVRLLVGSFNVGNSPITDLAPWLPYGGKGYDLIVVGLQESTY 506
            G  ++LL+G+FN+GN+ I ++  WLPY G+GYD+I +GLQEST+
Sbjct:   32 GSEIQLLIGTFNMGNAEIENIGEWLPYEGEGYDVIAIGLQESTF 75          
BLAST of mRNA_F-serratus_M_contig792.19215.1 vs. uniprot
Match: A0A1V9ZWR6_9STRA (Phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZWR6_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 2.800e-6
Identity = 24/42 (57.14%), Postives = 34/42 (80.95%), Query Frame = 3
Query:  384 VRLLVGSFNVGNS-PITDLAPWLPYGGKGYDLIVVGLQESTY 506
            +++L+GS+NVGN  P T + PWLP GG G+D+I VGLQES++
Sbjct:   30 LQVLIGSWNVGNKMPPTSVDPWLPQGGGGFDVIAVGLQESSF 71          
BLAST of mRNA_F-serratus_M_contig792.19215.1 vs. uniprot
Match: A0A7S1CC49_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CC49_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 3.160e-6
Identity = 25/42 (59.52%), Postives = 32/42 (76.19%), Query Frame = 3
Query:  384 VRLLVGSFNVGNS-PITDLAPWLPYGGKGYDLIVVGLQESTY 506
            +R+ V ++NVGN  P  D APW+P GG  +D+IVVGLQESTY
Sbjct:   53 LRVHVCTWNVGNKMPRADFAPWIPAGGGDHDVIVVGLQESTY 94          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig792.19215.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LK93_ECTSI5.710e-2964.36Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A7S3YA27_HETAK9.560e-1054.55Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A1V9ZWR6_9STRA2.800e-657.14Phosphatidylinositol-3,4,5-trisphosphate 5-phospha... [more]
A0A7S1CC49_9STRA3.160e-659.52Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig792contigF-serratus_M_contig792:234616..251490 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-16_002530.1
Exons3
Model size591
Cds size384
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig792.19215.1prot_F-serratus_M_contig792.19215.1Fucus serratus malepolypeptideF-serratus_M_contig792 234822..251490 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932356.2929769-UTR-F-serratus_M_contig792:234615..2348211622932356.2929769-UTR-F-serratus_M_contig792:234615..234821Fucus serratus maleUTRF-serratus_M_contig792 234616..234821 +
1690964268.886303-UTR-F-serratus_M_contig792:234615..2348211690964268.886303-UTR-F-serratus_M_contig792:234615..234821Fucus serratus maleUTRF-serratus_M_contig792 234616..234821 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932356.307861-CDS-F-serratus_M_contig792:234821..2350181622932356.307861-CDS-F-serratus_M_contig792:234821..235018Fucus serratus maleCDSF-serratus_M_contig792 234822..235018 +
1690964268.8967097-CDS-F-serratus_M_contig792:234821..2350181690964268.8967097-CDS-F-serratus_M_contig792:234821..235018Fucus serratus maleCDSF-serratus_M_contig792 234822..235018 +
1622932356.3238385-CDS-F-serratus_M_contig792:250654..2507601622932356.3238385-CDS-F-serratus_M_contig792:250654..250760Fucus serratus maleCDSF-serratus_M_contig792 250655..250760 +
1690964268.906296-CDS-F-serratus_M_contig792:250654..2507601690964268.906296-CDS-F-serratus_M_contig792:250654..250760Fucus serratus maleCDSF-serratus_M_contig792 250655..250760 +
1622932356.3380919-CDS-F-serratus_M_contig792:251409..2514901622932356.3380919-CDS-F-serratus_M_contig792:251409..251490Fucus serratus maleCDSF-serratus_M_contig792 251410..251490 +
1690964268.9226668-CDS-F-serratus_M_contig792:251409..2514901690964268.9226668-CDS-F-serratus_M_contig792:251409..251490Fucus serratus maleCDSF-serratus_M_contig792 251410..251490 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig792.19215.1

>prot_F-serratus_M_contig792.19215.1 ID=prot_F-serratus_M_contig792.19215.1|Name=mRNA_F-serratus_M_contig792.19215.1|organism=Fucus serratus male|type=polypeptide|length=128bp
MASTSTQDLPTGASISPSQDQRNTPVNDGPYPSHIRQRESVGVEEDSVDS
REEGYDGDRVRLLVGSFNVGNSPITDLAPWLPYGGKGYDLIVVGLQESTY
WAPRGSRESPPNGTSSLSPTNSVSPSRG
back to top

mRNA from alignment at F-serratus_M_contig792:234616..251490+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig792.19215.1 ID=mRNA_F-serratus_M_contig792.19215.1|Name=mRNA_F-serratus_M_contig792.19215.1|organism=Fucus serratus male|type=mRNA|length=16875bp|location=Sequence derived from alignment at F-serratus_M_contig792:234616..251490+ (Fucus serratus male)
ACTAAACGGACCGATATAGTCTACAGACCTCACTTTTTTTAGCCCCGCGC GCCGGTCAGACAGTCAAGCACGGGGAAATGTATCAAGGTTAGCGAAGACC AGGGCCAGCAGGAGCTTCGAGAAAGCTCGCTCTACAGGGGACGAAACGTA CTGTCCCGAAAACTTGCGAGGCAGGAAGAGTACTAGGGACAAGAACGAGA GAGGAGATGGCGTCAACCTCAACGCAAGACCTGCCTACCGGTGCCTCGAT TTCGCCGTCACAAGATCAAAGGAATACGCCTGTGAACGATGGTCCATATC CTTCCCACATTCGGCAAAGGGAAAGCGTCGGAGTCGAAGAGGATAGCGTG GATTCACGAGAGGAGGGCTACGATGGTGATCGAGTCAGACTGCTCGTCGG CAGGTGAGAGCTGTACCTTTTTTACTTGCCTATCAACTACTTTACTCGTA CAAACCGGCTACTGTATGAGCTCGATTATTCTTTCCACCGTAGTACTGTA CAAGAGTTTTTAAAGTGTACACTCGTATGCGTCGAGTTTTGTCCTCCAGT TACTACAGAACACATTTGGGCTCCGTTTGAATTAGAGGGGACCCTCAAAA TATACGTACAGTTTTTCCAGAGCTACACAAATTTGGGGCTAATTCGTAGG AGCTACTCGTACAACAGTAGGGGCCATTCCTTTGTCCCCTAACTTTGTTG TTCGAAAGTTATCCCCGACCATAGGACCGGTTTGGTTCCTTTGAAGCTCA AGGCACTTCTTACCTTGCCTTTCCACCCCGCCTACCTAAAGCCTATCACC ATTTCGACTGCTCGAAGTATCGCCAATTCAGTACTACACAACAGACAGCA ATAGTATTACAGCATTATATAGCAGTACCTTTACGCATACTGGTTGAACC TGGTAGTACCGGTATGTACAGTACTGGTATGCAACTACCCGAACTTGTGG CAGGCTACGAGCTATGATACCAGGTGCTTTTCTGGCACGATATTGAAAGA GAAGAAGGGCCCACAACCAGTATGAATGTACCAGCGCTGCTGCGATGCCA CTGAAAGAATGCAGGTACACTAACTGTACGTGCGGTGCGTTCAACCCAGC AGCAGATTATACTGTATTTTTAGCACTACTTTTACCACTGCTGCTGTACT GGTATTATTTTTCAGTCTCTCGTTTAAATGAAGGATGAAGGGCAGTCGTG GACGTCGTTTGCGTCTGTTTCGTTACTCCGCTTTTCTGAGACTACTTTGA CCAGACCGAAGTAAAAAATTGAGCACAGCAGCCAATGTTCCCACCGTTAA TAAACCTTTTTTGAAGAAAATACAGAACGCACCTAGACTAATTAGAAGGT TTAGATGCGTTCGGCACTTTTCGTTAGACTACTACACAGAGGTACACTAA CTGTCTGTTGTGCGTTTTTTGGTTCAAATCGTTGTAACAAGAATGATCGC TGTGACCCACAAAGTCAATTATATAGTGAGATATTGTAGCGGTACCGCAG CAGCGGTAGAGCTCGTTGTCCAAGACGTTAATTACAGACAGTAATTAGGC CTGTCGCAATGTCTGTAGTCTAATGGTGGTAAGGGAATGCATTTGTATAG CTACCCTGCTGTCCTGAAATCGGTGTACAAGTAAGTCAGACAACAGCAGC AGATCAAAGTACAATATATTTAATAGTGTAGAAGGACAACTGAGTACCAG GTATGTACTTGTGCTGCAGCTGCAACATTTAATTTTAACTTCAATTGCCA GAAACGGAGAAACCCGTCTCGCGAGACCAAATTCTCAGGCGAGAACGGGG TCAGGGCAATATAATAGTCATATTCCCTGTTCTGCTGACCACGAGCAGGA TTGACAACCTCACTCACCGAGTTAATTAATCCATACTCTGCATGATGACT ATACATACTTACATACCATTCTAACGGTAAAACCAAAACAACTACCAGTA TACTAGTTTAACTCTACTCTACCGTGTACTGGTACATAGCTCCTCGTCGT ACCGGTCGCCCCGGTAGCTCAGAAGTAAAACCTCGTAACATTTTGACACG TTGGCACGTGAGATTCGAATCCCGGCAAACGGGATTTTTTCCCACTAAAA ATAAAAATACCGAACAAGTGGAGAACGATTGAATCGTTAGTACACTTTTT CCCTGCTTATCTCGGAAGGTATTACAGGTTTTTGATCTGGTTTGGTTCCG TCTATCTTGTGACCACGGCTGGATTCGTAGCGGATCAGTTAATGTGAGAT AAACAACAAACAACACAAAAATTCGACTTCACGGTCAACGAGGGAAAGAA ATGGCTGAATCCTTCCCGCGAGAAAAATTAAGGTACGCACCGCCGCAGGA AGGCGAATGAGAAATTATGTGCGACCGTTCTCCTGTGTGACCCCGGCTGG TACGTTCAACGAACTTGATGTCCAAAATAAATGGGAATAAAACACACAGC ACATTGACAACAATATCACATACTAAAAATACAGGTGTTGTACATTTAGC CGCATTCTGTGTGCGAAACAGCATATTTTAAATTAAATACAGTTCTTAAA TAAATCCTCGGTTTTTCCCTCTATCATACCTGGTACAGGAGATGGTCACG AAAGGGACTTGCTGATTGATTGCAATTCGCACATCAATCAAAAGCGTCCA GGTCGCTTCTTTGGTGACCGTGTACCTCGTCCATTGCTGTCTGTACAAAC ACACACGCGTTTCTACTCGTATGTACTGTATGGACCAGTATAATAGTCGT ACGTCAAGAGTCCACCATGGCTCGGCCCCAAATATCTCCCGGACAAATGC CCTTTCGATTGATACAGTAGTAGACTATTACAATAGAGCGTATGTGTAGG GAATGGCCTGGCCGGTGCAAACCCGGCGGCGAATACACCCCGGCCTAGTA GGGGTACAAGGATAGAATCATGTGTGTCTTGGTTGGTGATCCTTGATTCT TTTCGTTTGTTTTAATTTTGCTTGGCCTCGCGTGTCGAGTGGGAGCGATG GGCTCTATCTATCCCCTTTTTATTATTTTATTATTTTATTTTATTTTATT TTGTTTTTTTCGGAGGGATGGGGgttcGTTCCTATTATCGCCTGTGTGTT GACTCCTCTGGGTCCTTTTATTTCTCGTTCATTTCTCATAATATATACTG GTACCCTTTTTGGGGGAAGTTAGCCTGTGACCACGGAAGGCGTTCGCTTC AGTTGGACCAGTACGGATGTTGGAAGGTACTGAGCAGAGAGCGGAACGGT TTTTAATGTGAAGACAACAACAACAACAATCGTTGCGGATGTGCTGGCAA TCTGCCATGTGACGAATGCCTCTTCGATTAATACAGTAGTACTAGAGCGT ATTGTTGCGGATGTTCTGGCAATCTGCCATCTTATTGTTTAAAGAAAAAT CAGAACGCTCCTATACCTTCTGAGCATCCTCCAGTCAGGAGAAAATTGTT GTTCAAAGAAAGTTTGTTTTTCACATTCAGCGTATTGGTTGCCAACCCGT AAAACTACTTGACACGGTGGCCAATCCCGCTCGTGGTTTCCAAAGAAAAA TCTGAACGCATCTATACCTTCTGAGCTTTCTGCGCTGTAGCAATACCGTA CGTATAGGCAGGCTTCTACCACTCCGATTCGTGGGCCCTATCCTACAGCT GGACAGAACAGTCAGCGTGCCGTTTGCCGGTTTGCTCTCCACCCGATCGT AGAACATACGCTCCCACCTAATAAACGTTTTGATATTTTGTTTCCCCGTG GCGGAGGGGGATGCTCAGAAGGTCTTGATGCGTTCAGATTTTTCCTTCTC TATCTCTATCATTAAGTAACAGTAATTCTGGTGTTGCTGTTTTTCTGGTG TCCCTGCATGGCGATTAGTGAAAGGGTACGGAGTATAACGGTGGGTTTCT CCCCGACATTATACTGTTGACCCAATGTTATCTACATTGGGGAACCCGTT GAAATGCCATGAAGAGGTTTTGTATTTGCAGCCTTTGATCCCACCTAAAC GTTTTGACATTTTTTCTTCTGACTGGAGGATGCTCAGAAGGTATACAGCA GTAAGCGCGGTCTGGTTTTTCTTTAAAAAATGTTTCCAGAAACCATTTAC CCGAGGGTACGTGCGTATGGTCTGGATGCAAGGCGATCACGTACGGATCG GTGCCGGAGCCAATCTGCCGATCGCTTCAGACAACCTCACCGTAGCCGTC GCCGAGTGCCTCAAGCGACAAGTACTCCATTCTTGAGATCACCATCGGGA TGGGTCGGGCCGTCTGCAGTGGAGATAAACCTCTTGGCAACCGATGTGCT GAATCTAAGGAAACAACCATTACGTATTGGGCACACAGAGTATCTGTAGC AGTATAGCAGTTTCTATAAGCCTGTTGTGGTCTTGAGGTCTTCAATTTTA TCTACCAGGTATGACTTGTGGACTACCTTCGTTGAAATAACAGCAATGAA CCTTATACTACGACAAGCCACATTCCTTAACTTATATTTTCTACAACCAC AGCTTCTGACTGTAGTCCTGAACTCTTAGGCACAACATACTGTCTAGGCT TCTTGTGGTGTGCTTTGGCTCTGTTTTGGCGTCCCTGCGTGGCGATTAAT AATACTACTGTAAGTGTACTACTACTGTTGACCCTCCTCTATTTCAAAGG ATGAAGAGATTTTGTCCCTAAAATGAAATTTCCCAGCTAAACCTTTTGAT TTTTCCCCCGACAGGGCGAATGTTCGGGAGGTTTAGATGCGTTCAGATTT TTCTCGAAACAACGTATTATATATTTCGAAGTATTGTAAATTTTAGGCCC TATATATCTATGACTTGCAGACCTCCCGCATCAAAACAACCAGAAGGTTT AGGCGCGTTCGCATTTTTCTTTAATCAGAAGGTTTAGGCCCGTTCGCATT TTTCTTTAAAAAAATACCAAACCTCAGCTTTAACTTTACATTCTCATCAA CGGGTCACATCATGGTGACAACCCGCTACTCAGACCAACTGGGATCCAAA TCGCGACGAAAATGTATGCGACTCTACAATCAAGGGTACCAAACCAATAT CAAAATGTTTCATCAAACCTCCTTACTCCATATCGAGAGCAGCCTCGATC GACTTGGATTGTTGTCGCCTTTTCTCAGCAACCAAAGCGGACAAATTACG CTTCAACCAGTTTTGATCAGCAAGTTCAAGCTCAAGGCGAAAAATAAGGA AAATTTGAAACACCGAGGTCCATGGTGGTGGAGGCCTTGAGCTAATGAAT CCGGCGCGCGAGCCAGCATGCAGCCGTCCAAAGCCCTGTGCATCCTTGAA AAAGCCCCACGATAGTTGCCTGTTCGCCGCTTCTTGTGGTCCTCGTAGGA AGATAAATGACCGTGGTCAGACATCAGCTTTTCCCTTAGAAATCTCCCGG TTCACGCCTTTGATTCTCGCGCACCGGGGTTCACCCCTCCCCTGGCCCCT CGACGATCGAGACGCCCTCCGCCTTCGCCGAATCTGGTGCGTACCCACCC GACAGAGCACTACCAGGCTCTCCGCGACAGTGCTCCCTGCCTCTCGCGTG CCGCCACCCTCCCGAAGGGCACCAAATTGGAGCTCGGAAGAGGCACACAC CTGGGAACACCATCCTCAGCGGACCATACCGCCGCCGCGTCTCAACCGAC AGGCCGAATCGCGAAGGCAGCCAGTTGGCGCATCTTTCGAGGGTGAGCCC GGCCCTACACTCGCCGGACAGACCCTTCCACACTCATACCCCGAAACCAG GCTTCGGAGTGAGAGGGTACGTGTAGGCTTCCCATCCCGTTCCCGACTTT GACACTCGTTCTCCCGTCCCACTCCCACTGTCTGTCCACTTATTTACCAT CTCATTCCCGATTGTTGAAACTGCGTTTTTCCCATCCCATATTCCACTAC CTATAGACCTTCTGAGCATCCCAGTCAAGGGGGAAAATGTCAAAACGTTT AAGTGGGATCATGAGCTGCAAAAGCAAAACCTCATGGCATTTAAACAGGT TTCCTAATGTTTCTCACATTCTGCGTATTGGTTGCCAACCGGAAATTAAT CTATTTTACACGGTGGCCAATCCCGCTATTTAGTACCTAATCAGCTGAAC AGAGATAAGTGAACAAAAGAAAAAGTCTGGCAGCACAACCCCACCTACCC CCCACCCTGCTCGTTCGTAGACAATAATATAAGAATCACGTGACGCGTCT ACATGCCTATTAATAGGCGCTACGCAGGTCTCGCTCCATCTCGCGTCCGT ACAAGGATTCCGTCGACTCGTCGACTAGGTCAATGGGTGTCGCTTCGCAA AATTCTACGCGTCCGTGTGCGATTACAGCTTTCCCAGTCTCGTTGCCTCT CTCTTCTCCTGGCGATGTCTAGCCGCGTCTACCTCTCTTCCCTCCACGCG GCCATGAACCTCCGCCCATCCTCCGTGACCGTTTCAACCCACACCTCAGC CTCTAACGCCGTCGATTTCCAATCCCCCGCTATGCCAAACACCCCGATGT CGCTCTGGTAAAGTACCCACCCCCCCGGAAGGTTTGGGTGCATTCAGATT TTTCTTTAAAAAAAAAGTGAAGAGAACTGAAAAAAATACGGAACGATGGG TGGGCACGTTGAACCAGAGAGCTTTTTCTCCTCACTGGAGGATACTATGA CAGCAGAAGGTACAGGCGCGTTCTGTTTTTTTCTTTAAACACACGGTAGA GTAAAATCAAACACCATATTGGTGGAAAACGGAGTGGGAAATGTAGGTGG TCATTGCTCGACCATTTTGGAAAGTTGAAGCGTGCGCAGTGACTAGATCG AAAGGTTGAACCTATAGTAATGGTACATAATGATTGTAATACCACGCCGA TACGGCCGGTCCCCCCGGTAGCTCAGAGGTACCTCGTAACCTTCTGACAC GTTGGGAGTTCGATCCCGGCAAACGGGATTTTTCTCACTAAAAACTAAAA ACTAAAATAAAAATGCCCCAACGGGTGGAGAACGATTAATTCGTTAGTAC ACAAAATTCGTTTTCACGGTCGACGGGGAAAGGAATGGCTGAATCCTTCT CGCGATAAAACTTAAGGCACGCACCGCAGAAGGAAGGTGGATGAGAAATC CTGTGTGACCTTCCTCCTGTGTGACCCCGGCTGGTACGTCCATTGATGTC CAGAATGGATGGGAAGAAAACACACACACACAACACTGTATCTTGGGACG TTTTATTGGTTCACTCTATTTGTAAGGCGAGTTGCAGCACTATGTAAGGA TGATAATACCGGTACAGTATGTGGTCGAAATGCTGTAGTTTCCGGCCTGA AAGCTTTTCAAGCCATAATTGATTTTCATAGAAATTTCTAAATCTAATGT TTGTAATTTTCTATATAAGAGAGCGCTTACGTTTGAGCTTTTGCTACAAT ATATAGGCTAAATCGGCTCAATATTCCCGGAAACATCACTATTTATTGTT CTTACTTTCAGCGAGCGGTTTTGGTAATCAATTTATCTTCTTAACCGTTT TTAACCGTGTGTGGTTGTGTGTGTTGTCTTCCCATTTGTCTGGACGTCAG ACTTGTGGACGTACCAGCCGGGGTCACTCAGGAGGAAAGCCACACAGGGT TTCTCATTCACCCTCCTTCTGCGGTGCTTGCCTTAATTTTTCTCGCGAGA AGGGTTCAGCCGTTCCTTTCCCTCATCGACCGTGAAGTCGAATTTTGTAT ACTAACGAATTTATCGCTCTCCACTTGTTGGGCATTTTTGTGTGTATGTG TGTGTGTGTGTATTTATTAAATTGCACCTAACCGCGCAATCCGGCCATGT AGTCTACTCATTCTATGCTACTGCATGTAACCCACCTGGGGTTACTTCTC GCCCCCCATCCAACCGTGCCGCGTACTGCAGCGGTGGTGTTATCATTCTG CCCCCTTCCCCTTTCAGCACCCAAACGGTGCGTGTCCCGATTTTACCCGT ACATATTTTCCTTCCACGTAACAAAATCCCCGCAAGCCGTAGAGCCCGGG GTGGAACACAAACCATAAGTCTTGCACTGGGCACCAATCCTGAGGGCAAG GAGAGAGTCAAGGGTGAAGCTAGTCGGGTACATAGTAGCCGAATAGGGTC TGCGCTAGTATGTGTACGCCGGAACGCCCAACATATTGAGCTAAAGCTTC TCGAATCCACGCAATTTGTGCTCAGTGCTGTTCTAATGGTCGCTGCATCC ACCTGTGGGCCCACCGGTTGCCCAGTAAATCCTCCTCCCCTCTCGTACCA AAACATACAGTCATACGAAAAATCCCCCGCATGCCATAGAGCCCCGGGGT GAAACACAAACCAAAAGTCTTACACTAGGCACAAATCCTGAGGGCAAGGA GAGAGTTAAGGGTGAAGCTAGTCGGATACACGGTAGCCGAATAGGGTCTG CGCTCTTAAGTGTACGCCGGAGCGTCCAACATATTAAGCTAAAACTTCTC AAATCAACGCAATTTGTGCTCAAGGTGTGTGTGTGTGAGGAAAAATCCCA GTTACCGGGATTCGAACTCACGTCCCAACGTCAGAAGATTTTTGCTACCT GGTATGATGAGCAGGCTGACGCGGGACGGGACTGCCGAAACCGTCTCGCG AGACCAAATTCTCAGGCACGAACGCGGACAGGGGAATATTCTTTTTCCTG TTCAGCTGACCACAAGCAGGATTGGCAACCTAAGGGCCTGTATTAACGAT GTTCGGAAAATCAAAATCGGAAAAAAACAGAATCAAAATTGGGCTCTGAT TGGTCGAGGCCTTAAAACCTCCCGACTACGCCAGTTTATTTTTTGGAAAT CGCTGCCAAACCAAAGAAATCCCCAGGGACTTAATGTTTATTTTTTGGAA AATAAACATTGGAGGTGTTCACCTGATGGAAGGCTTTCCGAATGCTACAC GCCAACAGAGCACACCAATTTTTACAACAGCAGCACGTAGAAAGACTGCA CCGCGACACCATACACACAACTTCTGCTGGCATGGCCCACGCCAACGGTC CCACGGCGAGAAGGAATTGTTACCTCTCCCAGCTGGTGGTGGGGACAGGT GCAACGAGTGGTGTTGAACTTTGGAGACGCCGATACAACGCGAAAGGCGA CGGGTGCTGAACTTTGGAAAAAATCAGGCTCGAGGTAGACTTGAAACACG GGGGCCGCGTCACAGCACACATAACACATCTGTTTTATACAACTCGTGTG TAGCTGTCTTGTCATGTACGGTACTGCTGTAGACCGGCTTGTGAAATAAC GCATGCGATGATGGTTGTAGCCTCCACACATACGCACTGCATCGTCTAAT ACCTTAGCACAGATAGACTTCGTATGTGTACTATGTACCAGTAGTTCTAC TGCTGCTGTTCCTCTCTTTCTTTATGTGTTGGTACAAACGGCATTTATTC CCTACTTCCCAATAAAAATGCCCAACAAGTGGAGAACGTTTTCTCAAAAT TCTACTTCACGGCCGACGAGGGAAAGGAACGGCTGAGTCCTTCTCGCGAG AAAAATTAAGGCACGCACCGCAGAAGGAAGGTGGATGAGAAATCCTGTGT GACCCCGACTGGTACGTCCAACGAATTGATTGGAATAAATGGGAAGAACA CACACACACCAACAACATTAGAAGCGAGCAGGTAGGGTACTGTCCGCCCG CACGTCGAAAGCACAAAAGGTAAACTACAACGAGGTCGAAGCCCACACAC GCTGTGAACCGTCCATTACGTTGAGAAAGTCCATCAACAGCGACGACCTC GCAGTCGTCACTCTAAGCAAACGACAAAGACACTTGGTCCTTGGGCTACG AGGAGGATGCACGATTGGCGAGAGAGACAGCAGTATAGCAGTAGTACTGC TACTACTTGCTGTGGTGTAAAATTGATTTTCCAACGCCGAGAGGTTTTAC ATACTGGCGGCGTTAATAGCCCGTTCGACTATTTTCCGTTAATAATGTGA CTCGCAGTGTTTTTCTGCAAATCAATCTTTGCTTTTTGCTTTTTGATCTT CCGATTTTGATTTTCCGAACATCGTTAATACAGGCCCTAACCAGGTTGAT CCATACTCTTGCTATATGTATGAGGACTATGACCATACATCAATAAGATG CAGACGTTCGCCCAAAATCCGAATTCGGCCCGATTTTGAGATATCAAGTA TTTTGGATTTCCAGCCCCATAAGACATATTATATGGTCAAAGGCCGACTC TTACGGATAAAAAAAATGTGACAGATATCAGATATACTATAATAATAATA TTTTTCTGATAACAACCACAAACTCCAAGTTATGGGTCAGATAAACACGA TTTCGGATCACTTTTTTCGGAAGAAGTGCTTTTGGAGGAGCAGTTGGTCA GAATATTTGGAAAAACGAAGGAAGTAACCAGAAAAATACTTATTAGTAGT AGCGAGACAAAGGCATCCCCTGGACGGATGGACGCAAAAGTTCAAACCTG CCTCCAAACACAGACATCGTGTAGGTTGGAGGCAAGCATGGATAACTGCA TTGCAGCGGTGGCGGTGGTAGCATATCGACGCCGCAAGCAGCAAGCTGAG AATAAAAAATATCAATCAGTCGGCACTCGTTCTAGGGTTGCTCGAAGAGG AAGATGCAATCGTGTCCCGAGAACATATCTGTAACCTTTGCAATGCCCGT CGTGCAGCAGTTACGTCCTTGGTACCGTACATGTTATTAGATGCTGTTGG AGGCCGCTTGTTCAGTACTGTTTGCGTGTCACGTCGCGGCCTTCGAGCTG CATTCGTGTTGTTTTGCAAGCCCGGAACGATTGAAGACCACGTGCTTTAC CACGCCACGGTTGTAAGTAGGTGCACACGCTTATGTGCTTTTACCCGCAG CAGCAGTCCCGGACGGACGGACGCAAAAGTTCGAGTCTGCCTTGAAACAC AGACCTCGTGTAGGTTACGAGACAAGCATGGATGACTGCGTCGCAGCGGG AACGGCCACGGTGGCAGCATATCGACGCTGCAAGCAGAGAATAAAAATTA CCAATCAGTTTGCACTCATCCCGGGGGTCGTTCCACGTGGAAGATGCAAA TATCGTGTCCCGAGAACACATCTGTACCCTTCACAACGTGCGTCGTACAG CAGGTACGTCCTCGGTACAGATTAGATGCTGTTGGAGGCCGCTTGCACAG ACAGTACTGTTTGCGTGGAACGTTGCGGCCTTCGAGCTGCATTCGTGTGG TTGTGCAAGTCCGAAACAATCGAAGACCACGTGCTGTACCACGCCACGGT GGTTGTAAGTAGGTGCGCAAACAAGGCAATGAACCTACCCACAGCAGTCC TTCGCGATATGTTATGGGTGACAGCATTATCTAAAACATACAGTGGACTA TGTAGACTATACATTGAACATACTCTCCAATAGAGTACAACGTACAGACG CCGAGATTCCTCGGCTTTGAATATATTTGTGCTACTTCCAATGGTGGCAT GGCACAGGACATGATCTTCGATCGTGTGGAGCTTGCACAACCACACGAAT ACAGCTCGCCGGCCGCACCGTATCATACCATGCAAACATACTATTAATAG TATGGAAGAGCATCCAACACACAACAATGGAGCCATAAACTTCCAGACAT CATATGACTACTGTCAGTATACAAAATATTTCGATGATGCTTTTCTGGCC CATAAATCACGTTCGCATCCGTGAATTCATCCGAGATTTTCTTAGTCAGA AAAAAACGTTTTTATCACTTTTTTTTTCCGTCTCGTAGGAGTCGGCCTAT TATTAATAGTCTAAAACTCCTGCATTGGCTTACGAAAAACCTTTCTTTTT TTGAGCTCGTGTTACCATTTTTGTGCGAAAGGATCTCGGGGGGGTAATGC GGCGCAACATCATTTTTTTTTAACTCGGGTGGCCTGAGGGGATTGTTTCA ATTCCGGTTGACCAACCCGACCAGTATCGCTAACGCTAGCCCAGACCCCC CTACCCCAGCTGACCGCGTGGTCCCATTTCATGGCTGGCGCTTGGTCATA ATACCTTGTGGGCTGATTTTGTGGGCGTCTCTGGTTCGGTTTTGTCTCTG GTTTTGTGGGCGTATCCAACCAAAGAAGTAAATATCCATGGCAGTGGGCT GATTTTGTGTGCATCTCTACCCGATCAGGGGTCAGGAAATAACTAGGTAC GTTCCGTTTTTTCTTTAATAGAATGAGTCGCACAAAAAAGCCAGTTTCGT GGGAAAAAATAACATTCGTAGGGCTCCCACGCGCGAGTCGCCGTCCCTCT GTAACTTACTGTTAAGTACTTATTAATAGTACAGTATAGTCGCCCGAGTG GTCTAATAGGTAACCTGCACACTTGCTTGTACGGAAGTCGTGAGTTCGAT TCTTAGTGGGCGTATCCAACCAAAGAAGTAAATGTCCATGGCAGTGGGCT GATTTTGTGTGCATCTCTACCCGATCAGGGGTCAGGAAATAACTAGGTAC GTTCCGTTTTTTCTTTAATAGAATGAGTCGCACAAACGCCAGTTTCGTGG GAAAAAATAAAACTCGTAGGGCTCCCACGCGCGAGTCGCCGTCCCTCTGT AACTTACTGTTAATTACTTATTAATAGTACAGTATAGTCGCCCGAGTGGT CTAATAGGTAACCTGCACACTTGCTTGTACGGAAGTCGTGAGTTCGATTC TTAGTGGGCGTATCCAACCAAAGAAGTAAATGTCCATGGCAGTGGGCTGA TTTTGTGTGCATCTCTACCCGATCAGGGGTCAGGAAATAACTAGGTACGT TCCGTTTTTTCTTTAATAGAATGAGTCGCACAAACGCCAGTTTCGTGGGA AAAATAAAACTCGTAGGGCTCCCACGCGCGAGTCGCCGTCCCTCTGTAAC TTACTGTTAATTACTTATTAATAGTACAGTATAGTCGCCCGAGTGGTCTA ATAGGTAACCTGCACACTTGCTTGTACGGAAGTCGTGAGTTCGATTCTTA GTGGGCGTATCCAACCAAAGAAGTAAATGTCCATGGCAGTGGGCTGATTT TGTGTGCATCTCTACCCGATCAGGGGTCAGGAAATAACTAGGTACGTTCC GTTTTTTCTTTAATAGAATGAGTCGCACAAACGCCAGTTTCGTGGGAAAA AATAACACTCGTAGGGCTCCCACGCGCGAGTCGCCGTCCCTCTGTAACTT ACTGTTAAGTACTTATTAATAGTACAGTATAGTCGCCCGAGTGGTCTAAT AGGTAACCTGCACACTTGCTTGTACGGAAGTCGTGAGTTCGATTCTTACC AAAGTAGGATTTGTGTTCTTTCTTTCGTAACGGAAAGCGTTAGTACTAAT AGTGAGTAAGTAAAATGTAACCATTGGTTGACGAGTTGTAAGATTGCTGA ACTTGCATCGCGATGAAAAAATGCAAGGCGTGAACCGGGGAGAGATGGAA AGATCCTTTGTGACCACAGGCAGGATGGTAATCAAGGGGTCCATCGGCTA TATAAGTGAGATTAAAGAAAAAAATGTACAGTACTCTGTCCTACAAGTGT TGCTGTCTCCGCCGCCCGTTATCATTAACCTTTCAGCAACTAACGTACTA AAAATGCTATGTTTTTATTTATTTTTCGCGTGAGTGTGAAAGTGTGCCTC CAATATCTCACCAGTGTAATGCGTGAGGGTGGGTGGAAAAAACTCATATA TATATATATATATATTATAGAAGAATTGGCCCAATGGGTCACATGAGTAG GAGGCACCCGTTACTAGCTAATATAGCTACTGGCCCTGTGTCGGCGGATT CTCGGCGGTAAATGTGTTACCTGATCAACTCTAGACTGACATTCGATAGA GTTTGGAGGAGGAAGTCGACGAAGCACCATATTCAGGTAGTCTGGGTGTG GTGAATGAGAGGCGGGCTGACGCGGAGCGCACCTTTCTCGTGAGACAAAA TTCTCAGGCGCGGACGAGGATAAGGCATTTTCATTTTCCCCGACCTGACC ACCTGACCACCCCTGTCTTCTGAGGCCAAGCTCTCAGGTGCGAACGGGTC CGGCCCAGGGAAAACATTGTTTTTTCCTTTTCAGCTGACGCATAATATAA TAATAATAATATAATGTGGCGTCAATCGTGTGTGTACCGTACCACGTACA GTTCTTTAACCCTTTTGGTACTATCGGTCTGACAACGGCTATTTTTTTTT GTCTTGACAGTCCTGTGCTGCTCGCGCTACTTTACATGGGCCAGCCACCA TGATTACTCATTTTACAGTACACTGTTTACACACCCCAAGTAGTATACGC CTTCTTCGTCTCTAACTGTTGGTGTTAAGCGGTTGTTAGTACCAAACTAG TACGAGATTTTTCAGGAAAGCTGTAGTAAAGTCAAGTGAAGAACAAAGTT GTTTTGGGGTTTACATTTTGTACCGTGCACAGTTTTGCGGGGTTGATTCA TGGTAGATCCTCGCTGAGCCGTATCTTGCGACTGCTTTTAGTTTGGGAAG GTGCTGTACTCGGGCTCCGGACCTCGCTGCCCAATCAAGGCTGGAAAATA AACAGGCGGTCGACCGCCTGTTAAGCCCTCTCAAGTACCAAAGGGGTTAA AGCACGGTTGGAGCCCAATTTTAAATTTTCCACCACGCAGCACAAGCAGT TTTGACAGTTGGAGTGACGACCACTTACACGAATACTGGCGAAAGACGGA GAGAGAGTAGAGACAAGAGGGCTGGCTCGAAGGTTCCCAAGTCGATCTTG TTGCTATCGGCGCCTTTTCGTCCTCTGTTTTTCCTCGAGCGAACTTGTGT CCTCTGTAAGTGAGTAAAGTCTATTATAGCTGCACAGCAGTCAATCACGA GCGTATTTTATTGCTTCTGTTTTGGTGTACCTATTAATAGATGGCCATTA ATAAGTACTGGTATACAGTATACAGAGTGGTACGATGGTGGGTATCTCCA TATTATATACTGTTGTATAGTATATATTATGCTTTCTTGACCCTACGAAT GTGCGACTTAAAATGAGGAACCCGAGTTACGACCACACACCACGTTGGGC AGTATTACTAACAGTACAATTGAGTCGTCGAAGGACAGCCGTAGCGCTAA TGCACGTATCCCGATACCGCCTCCAATACCCTCCAAAACCTTCTGTATTG CACACGTCAGCTGTACCAATAGACTATTTAGTAGTAATATTGGGTGTGGG AAAAGACCACTCAGGCGACAAGCGACTGTAAATTACACGTTACAATACTG ACTACTATTAATAGCCAGTATAACTGCTTCTAACACATGCTATATCGATA CCGAGTTCGAAATTTCGGACAAATTTTAAAACAATGGTACTGCAGCTGTT GTATTAATATTTAGTATAATACTGTAAATAGTATAAAAGAGGAATTCGTC ACTAAGTAAGCCAAGTCCCTTTTTTTTTGCGAGTTGTTAAAAAAAAAGGT TCCGAGTTTGATTTGCGACAAAAAGAGGCGTTAGAGTCAATCGGGGACAG ATGGTTCGATCCCCCAGTGACCACGGGTGGGATGGGCAGCGTTGCGGGTG ATGAGAGTTCTCATATTAATACAGTATAATAATTGACTTATCAATCCGAT GGAAACTGCGAAAACCACAGAACGTGACGTGTGACGTGTGAAGACATGCT GGACGAGTAAAAGTGCCTGTAGTTTTTTTTAAGTGCCAGGAAGTCCTGTG CTATTCCCACGGAGGCATTATAAAGACGCGCAACGGGATGTGTCCCCTAA AGAGAACATGACATGCACTTGAGCACTGCAAAAGGAAGTTGTATAATACG ACACAATCAAACTTGTTGTGTTAGAGCCAAGATGCGATTGTGTCCTTAAT AACAGCGACAGGAGTTCACTTTGTTGTTGCCACCGCCGCCTTAGGCGTCA ACTCTCCGAAACGAACACACACCACCCAGTCAGGTGCTCGAAGCTGTACA GTTCTCTTGTTCTTTCTGACGTCAACAATATTATCATGCCCGCCCCTCGC TTTTCCGCGTTCCCTCCCTCTCGCTTTGTTGTGTGGTATAAAAAATGCCC GTCTCTCCTTGACAAAAACGCCTGTCATTTCACGACCAGCTTCAACGTCG GAAACAGTCCGATAACCGATCTCGCCCCGTGGCTGCCATACGGCGGCAAA GGGTACGATCTTATCGTGGTGGGCCTTCAGGAGAGCACTTACTGGGTGAG GGGGAAAACGCCCGTAGATATATCGTGGAAACCCTTCCTTCCCTTCTTGT ATTCGTTAGTTGCTTACTTGTGTTTTGGTTGGGGGTTTAAAGAAAGATAC GCTGGAGGAAAATAACGGGATAAGAACACCGGCACTAGCTTGATTTAAGA TTTGTCGGGTACCCTGGTCGCAAGTCAGCACAGTTGCTCGAGTTTGCTGG CGCGAGGTTCCGGCTTTATATGTGTGTGTTTGTGTTAGGTTGGCGTGGCG TGGCTCGGCGGTACAACGGCAAGATTCGTGACAGGTCGCGGTCATAACAT GTGCGGACAAGGGAAAAACAGAAGGTCATATTACGGTGGTGCGATGTCCT TTGTGAGTCGGTTCGCATTTTTTTGTGGAAATGTGTAACTGGCTAGGCTG TTCTTTAGGAGTGCTCCTCGTGAGATTTCCCGCCCCCGTCTCGAATGCCA GTGATAGTTCCGCAGATGTCAAGAATAGCCATCATAACCATACATCAGTA GTGCGTCATCCTCTCTTGTGCCGAAAATCCCGCCGCGCCAGAGAGCCAAA ACCCAAAACGTGCCTTCCAACCCGCACACGAGAACCCATCTGAGGAGAGG GGTGAACCACCGCAATCCGACGACCAATCCTGTTTTCCGCCCAGGCCCCT CGAGGATCTCGCGAATCGCCACCCAATGGTACTTCCAGCCTCAGCCCGAC TAACAGCGTTTCGCCGTCGAGAGGG
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig792:234616..251490+

>mRNA_F-serratus_M_contig792.19215.1 ID=mRNA_F-serratus_M_contig792.19215.1|Name=mRNA_F-serratus_M_contig792.19215.1|organism=Fucus serratus male|type=CDS|length=768bp|location=Sequence derived from alignment at F-serratus_M_contig792:234616..251490+ (Fucus serratus male)
ATGGCGTCAACCTCAACGCAAGACCTGCCTACCGGTGCCTCGATTTCGCC
GTCACAAGATCAAAGGAATACGCCTGTGAACGATGGTCCATATCCTTCCC
ACATTCGGCAAAGGGAAAGCGTCGGAGTCGAAGAGGATAGCGTGGATTCA
CGAGAGGAGGGCTACGATGGTGATCGAGTCAGACTGCTCGTCGGCAGATG
GCGTCAACCTCAACGCAAGACCTGCCTACCGGTGCCTCGATTTCGCCGTC
ACAAGATCAAAGGAATACGCCTGTGAACGATGGTCCATATCCTTCCCACA
TTCGGCAAAGGGAAAGCGTCGGAGTCGAAGAGGATAGCGTGGATTCACGA
GAGGAGGGCTACGATGGTGATCGAGTCAGACTGCTCGTCGGCAGCTTCAA
CGTCGGAAACAGTCCGATAACCGATCTCGCCCCGTGGCTGCCATACGGCG
GCAAAGGGTACGATCTTATCGTGGTGGGCCTTCAGGAGAGCACTTACTGG
CTTCAACGTCGGAAACAGTCCGATAACCGATCTCGCCCCGTGGCTGCCAT
ACGGCGGCAAAGGGTACGATCTTATCGTGGTGGGCCTTCAGGAGAGCACT
TACTGGGCCCCTCGAGGATCTCGCGAATCGCCACCCAATGGTACTTCCAG
CCTCAGCCCGACTAACAGCGTTTCGCCGTCGAGAGGGGCCCCTCGAGGAT
CTCGCGAATCGCCACCCAATGGTACTTCCAGCCTCAGCCCGACTAACAGC
GTTTCGCCGTCGAGAGGG
back to top