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Homology
BLAST of mRNA_F-serratus_M_contig792.19213.1 vs. uniprot
Match: D8LK98_ECTSI (Similar to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK98_ECTSI) HSP 1 Score: 321 bits (823), Expect = 2.800e-95 Identity = 260/433 (60.05%), Postives = 311/433 (71.82%), Query Frame = 2
Query: 5 IGGSALRQRQHSFFSTSSFASSRL---PTGMEEKNPDGDSEDD---DSGAIARKLRRDRVRKRSRAHSRRKLVGALTAPTDNKGERIDVHTAAYSGHLGLLKSYVSQGGDLEVPDQFQSTPLMLASERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLATDTTVWRMVRTEEVVRQSGETFDLMAAVEANDTQALGRFIAMGQEACGYPSNPMAVPQAAQRLRLDRQGRGGMTAVHLAAFHGYADALQMLLDGGADPNAICEDGETXXXXXXXXXXXXXXXXXXXXXXXXLATDGKGLVPCEKPIAARREDMKKLLETKAFQATPANLLDVRADLAEVALQIDAEEELFVRKGVAIKYLRKALKKKEVEMMRVRQAVDLRDIDLRNLSDRMDGLYRTLSVV 1285
+GG + +R+ S S S+R G E + D DS++ D+GA ARKLRR+R+RKR A RK+ L P D++GE I VHTAAY+G +LK+Y+SQGGDLE+ DQFQ+T LML +ER XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LATD + R++R E++VR SGE FDL+ AVE NDT A+ FIAMGQEACGYP NP AV A++RLRL+R GRGGM+AVHLAAFHGYAD+L++LL+ G+DPNA+ +DGET XXXXXXXXXXXX CEK IA R++MK LLE KAFQATPANLL +RADLAEVALQIDAEE+LFVRKGVAIKYLRKALKKK+V++ L+DRM+ +++ L V
Sbjct: 733 LGGGGVHKRRPSRRRQLSNMSNRTLHSVAGGEGEEEDADSDEGSVMDAGAAARKLRRERLRKR--AKQSRKMSSVLAVPKDDRGEVIHVHTAAYNGKQDVLKAYISQGGDLEIRDQFQATALMLCAERGHTQMVDDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLATDPAIRRILRIEQMVRFSGENFDLLGAVEVNDTMAVANFIAMGQEACGYPHNPNAVAVASKRLRLNRTGRGGMSAVHLAAFHGYADSLRLLLEAGSDPNAVSDDGETPLHTACNGGSILXXXXXXXXXXXXXXXXXXXXXXCEKHIAGGRQEMKHLLEAKAFQATPANLLALRADLAEVALQIDAEEDLFVRKGVAIKYLRKALKKKDVDLGXXXXXXXXXXXXXXXLADRMESVHKLLKGV 1163
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 320.1 |
| Seed ortholog evalue | 1.5e-84 |
| Seed eggNOG ortholog | 2880.D8LK98 |
| KEGG ko | ko:K21411 |
| Hectar predicted targeting category | other localisation |
| EggNOG free text desc. | response to abiotic stimulus |
| EggNOG OGs | COG0666@1,KOG4177@2759 |
| COG Functional cat. | G |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko03400 |
| Exons | 6 |
| Model size | 1437 |
| Cds size | 1215 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622932356.0190852-UTR-F-serratus_M_contig792:182265..182350 | 1622932356.0190852-UTR-F-serratus_M_contig792:182265..182350 | Fucus serratus male | UTR | F-serratus_M_contig792 182266..182350 + |
| 1690964268.7195754-UTR-F-serratus_M_contig792:182265..182350 | 1690964268.7195754-UTR-F-serratus_M_contig792:182265..182350 | Fucus serratus male | UTR | F-serratus_M_contig792 182266..182350 + |
| 1622932356.135603-UTR-F-serratus_M_contig792:185898..186035 | 1622932356.135603-UTR-F-serratus_M_contig792:185898..186035 | Fucus serratus male | UTR | F-serratus_M_contig792 185899..186035 + |
| 1690964268.8069801-UTR-F-serratus_M_contig792:185898..186035 | 1690964268.8069801-UTR-F-serratus_M_contig792:185898..186035 | Fucus serratus male | UTR | F-serratus_M_contig792 185899..186035 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622932356.0370858-CDS-F-serratus_M_contig792:182350..182427 | 1622932356.0370858-CDS-F-serratus_M_contig792:182350..182427 | Fucus serratus male | CDS | F-serratus_M_contig792 182351..182427 + |
| 1690964268.7374425-CDS-F-serratus_M_contig792:182350..182427 | 1690964268.7374425-CDS-F-serratus_M_contig792:182350..182427 | Fucus serratus male | CDS | F-serratus_M_contig792 182351..182427 + |
| 1622932356.051954-CDS-F-serratus_M_contig792:182681..182841 | 1622932356.051954-CDS-F-serratus_M_contig792:182681..182841 | Fucus serratus male | CDS | F-serratus_M_contig792 182682..182841 + |
| 1690964268.749277-CDS-F-serratus_M_contig792:182681..182841 | 1690964268.749277-CDS-F-serratus_M_contig792:182681..182841 | Fucus serratus male | CDS | F-serratus_M_contig792 182682..182841 + |
| 1622932356.0720313-CDS-F-serratus_M_contig792:183433..183631 | 1622932356.0720313-CDS-F-serratus_M_contig792:183433..183631 | Fucus serratus male | CDS | F-serratus_M_contig792 183434..183631 + |
| 1690964268.7610576-CDS-F-serratus_M_contig792:183433..183631 | 1690964268.7610576-CDS-F-serratus_M_contig792:183433..183631 | Fucus serratus male | CDS | F-serratus_M_contig792 183434..183631 + |
| 1622932356.093209-CDS-F-serratus_M_contig792:184321..184742 | 1622932356.093209-CDS-F-serratus_M_contig792:184321..184742 | Fucus serratus male | CDS | F-serratus_M_contig792 184322..184742 + |
| 1690964268.7717059-CDS-F-serratus_M_contig792:184321..184742 | 1690964268.7717059-CDS-F-serratus_M_contig792:184321..184742 | Fucus serratus male | CDS | F-serratus_M_contig792 184322..184742 + |
| 1622932356.10924-CDS-F-serratus_M_contig792:185169..185277 | 1622932356.10924-CDS-F-serratus_M_contig792:185169..185277 | Fucus serratus male | CDS | F-serratus_M_contig792 185170..185277 + |
| 1690964268.7812455-CDS-F-serratus_M_contig792:185169..185277 | 1690964268.7812455-CDS-F-serratus_M_contig792:185169..185277 | Fucus serratus male | CDS | F-serratus_M_contig792 185170..185277 + |
| 1622932356.1224744-CDS-F-serratus_M_contig792:185647..185898 | 1622932356.1224744-CDS-F-serratus_M_contig792:185647..185898 | Fucus serratus male | CDS | F-serratus_M_contig792 185648..185898 + |
| 1690964268.794049-CDS-F-serratus_M_contig792:185647..185898 | 1690964268.794049-CDS-F-serratus_M_contig792:185647..185898 | Fucus serratus male | CDS | F-serratus_M_contig792 185648..185898 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig792.19213.1 >prot_F-serratus_M_contig792.19213.1 ID=prot_F-serratus_M_contig792.19213.1|Name=mRNA_F-serratus_M_contig792.19213.1|organism=Fucus serratus male|type=polypeptide|length=405bp
MEEKNPDGDSEDDDSGAIARKLRRDRVRKRSRAHSRRKLVGALTAPTDNK GERIDVHTAAYSGHLGLLKSYVSQGGDLEVPDQFQSTPLMLASERGHTEI VAVLLAAGADVGCMDENGNSALHLACYYGNYGVVELLLAVDVDLNALDSE GRTPLDLATDTTVWRMVRTEEVVRQSGETFDLMAAVEANDTQALGRFIAM GQEACGYPSNPMAVPQAAQRLRLDRQGRGGMTAVHLAAFHGYADALQMLL DGGADPNAICEDGETPLHTACTGGSFRCVTLLLDNGSNPLATDGKGLVPC EKPIAARREDMKKLLETKAFQATPANLLDVRADLAEVALQIDAEEELFVR KGVAIKYLRKALKKKEVEMMRVRQAVDLRDIDLRNLSDRMDGLYRTLSVV RRCE* back to topmRNA from alignment at F-serratus_M_contig792:182266..186035+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig792.19213.1 ID=mRNA_F-serratus_M_contig792.19213.1|Name=mRNA_F-serratus_M_contig792.19213.1|organism=Fucus serratus male|type=mRNA|length=3770bp|location=Sequence derived from alignment at F-serratus_M_contig792:182266..186035+ (Fucus serratus male) CCAGATTGGTGGGTCGGCCCTACGGCAACGCCAGCATTCTTTTTTCTCCA
CGTCGAGTTTTGCATCGTCGAGGCTGCCGACTGGAATGGAAGAAAAGAAT
CCTGACGGTGACAGTGAGGACGATGATAGTGGTGCCATAGCTCGCAAGCT
CCGAAGGGATCGGTGAGTGTGGACAGTATGGCAGCAGCAGGATATGCCGC
AGACAAGAGTCGCGCCTTAAGGAGCTTGTTTTGTGCGTCTGGTCTCACCT
CGGGTGTGTCGTGAAACGCTCAAACATTCCCTTGACACGGTTTGACGGTC
AGGGCGGACTGTCTCCTAGATTCCCCAAGATCGATCTTGTACGCTACCCC
ACCCCATCCCTCTCACTCCGCCAGTATATATATATTTATTAACTATTCTC
TTGTTCGGGTTCCCAGGGTAAGAAAGCGATCCCGCGCTCATTCGCGAAGA
AAACTGGTGGGAGCGTTGACCGCGCCCACGGACAACAAGGGTGAGAGGAT
TGACGTCCACACGGCCGCGTACAGCGGGCACCTGGGCCTCCTCAAGTCGT
ACGTCTCGCAGGGGGGCGACCTTGAGGCGAGTCGTGACTTGACTTGAAGA
GCCGCGGCTCGCACGATATCAATTTTTGAAGTGGGCGCGTGTGCGTTCTA
GGGCTAACTTCGCGTTTGGAAGATCCATGTAGATTCGCGGTTTTTCTCAG
CGAGAAGAAACAACGGGCCGGGCGCCCATCGAAATAGAAGCGCGGCGACG
TGTGATGGGTAGTTAGGTTCACTTCGAAGAAATTTCAGGTTCGTTCCTAT
CGTTTTTACCATTTTAAACAAACACATATATATTTATGTGTCGTGTGGGG
GATTTTGATACCACCAAACTTTAAAAATCGCCCTTTTTGTCTTCATTTTC
ATCCGAACTCTTCACTTCAGTATCTTACTTTCGAAATATGTCTTTGCTTT
GATTTGCTTTGGTTTGCTTTGGTTTATGAAGGCATGCATGCCTCTTTTTG
GGGGGGAGGCGACCTAGCTCGCGGTATTGCTGGGATTTTTTTTGTTTTGG
TCAAGTTGAAAGTTTTGGCCTTTTCTGTCAATAAAAGTTGACATTGATAT
ATATATATATTTATGAAGAAGAATTTTTTTAAAAGCCACATTGGCCGCGC
TCCGCCTCTTTTCGCCAGGTTCCCGATCAGTTCCAGTCGACTCCTCTGAT
GCTTGCCTCAGAGCGAGGCCACACGGAGATTGTCGCTGTTCTTCTCGCGG
CGGGAGCGGATGTGGGCTGCATGGACGAGAACGGAAACAGCGCTCTACAC
CTGGCGTGCTACTATGGCAACTACGGCGTGGTGGAGCTGCTGCTGGCCGT
TGACGTGGACCTCAATGTTAGTGGGGGCAAGAGTGGGCTCTATATCTTGA
AGAGTTGATGCATATTCGGAAGGCTTTTTTTTCTGTTTTGGATCAAATAG
TTGTTGGGAAGACTGGGTGCTGTGTGTTTAAAGACTACCGGTACGTGTGC
ATGTGTGTGTATTTATTGAATTGCATATAACCGCGCAATCCGGCCCTGTC
ATCCTGGTCATTATATGACACTCGCATTGATCCTCCCGCGGGGATCAGTG
ATACTTGTTACGAAAACCTCTGATCAGACGCGACAAAGGGGACACTTTGT
GTGTGTGTGTGTGTGTATTTATTAAATTGCACATAACCGCGCAATCCGGC
CCTGTCATCCTAGTCGTTCTATGACACTCGCATTGATCCTCCCAAGGGGG
GATCAATGATACTTAGTGTATGTATGCATGGATTCAAAACAGCTTTTACT
CACTCACATTTCCCATACAACCCCCTGCCTCCGCCTTCTTTATGGTGTCA
GTTGTTGTTTTTTTCTCTCTCTCGATCTTTTTTACGATACCACAAGGATC
GGAAATACAAACTTTGCCCTGATTGATCGATCGAACAATCAACCCCAGTA
GGAAATGTATACATCCGAGTATTCATGATACGTACGCTAGAACCGCCCCA
CCTTTCCCCTTACGAATGGCCTCGTCTGATATCACAATACCATCTCTCCC
GCACAGGCCCTTGATTCCGAGGGAAGAACCCCGCTCGATCTCGCCACCGA
TACAACCGTGTGGCGCATGGTGAGGACTGAAGAAGTTGTCCGCCAGTCCG
GGGAAACCTTCGACCTGATGGCGGCCGTGGAGGCAAACGATACCCAGGCG
CTCGGCAGGTTCATCGCCATGGGGCAGGAGGCCTGCGGTTACCCGAGCAA
CCCCATGGCCGTGCCCCAGGCCGCCCAACGCCTCCGGCTCGACAGGCAGG
GCCGTGGCGGAATGACGGCGGTTCACCTCGCCGCGTTCCACGGCTACGCA
GACGCGCTTCAGATGTTACTTGACGGAGGCGCGGATCCGAACGCGATCTG
CGAAGACGGAGAGACCCCTCTGCACACCGCCTGCACGGGAGGGAGCTTTC
GTTGCGTCACGCTCCTCCTCGATAATGGTGTGTTGGTGTCTTGAAAAGCG
CTCGTAAGGGTGATTTATTTGTTGTTGCTTTATTTATTTTGGGGGGGGGG
AGGGGGGTGGGCTGGTCAAGGACATGGGGAGGAGACGTTGTCTTTTGGCG
AATTGTTGTAATTTTATTTATTTCTCGATCCATGTGACGAAAATTGGCGG
GAAAAGCTCTAAATAATCCCTCTCTCTCCGCGTCCCAGAAAAAAAAAACT
GTCTCGGAAACATACGACAGAAAATCCTCCTCCCGTTTTAGTGATTCCTA
GGGGGGGAGGGGGGGGGGGGTAAAATCAACGCACTCTTCCCGAGAAAAAA
AACAGTCTAAACAGCCGAAAATATGCCCTCCGGTTTTTGCGTTTTCTGAG
TAGGGCCTCTCAATCAACGCACGGCCTTTTCTTGCGACGTTTATGTTCTG
TCAGGGTCCAACCCTCTCGCTACCGACGGTAAGGGCCTCGTGCCCTGCGA
GAAGCCAATTGCGGCGAGGCGGGAAGACATGAAGAAGCTCCTGGAGACGA
AGGCTTTCCAGGGTGAGAATTTGGGAAATTGGAAAAGTGTACTTTTTTTC
ATTCGTTTTTTTTTTGTGAGGGGCGGGGGGGGAGGGTTACGAGATGCCGT
TTCCTTCACAACCCCTGTATCAGCATTTCGTATTTTTGTATTTTTTGAAG
AAAATACGGAACGCACCTAGACCTTCTGAGCATCCCCCATTTTTGTATTT
TTTGTTTGCAAGTGTACAAAAAAACACAGTAAAATTATTCCCTCCCCCCC
CGAAACACACACTTGCCTCCTATTTCTTTTCACGTAAGACCCTTCACCGA
GTCTACTTATTTTCGCCTTCAACTGAATTTTCTAGTATCTGTATCTGCTA
TGTACCCTCTATCCTTCTACTCGCTCCGTCAGCTACCCCGGCAAACCTTT
TAGATGTCCGGGCCGACCTCGCCGAGGTGGCGCTCCAGATCGACGCCGAG
GAGGAATTGTTTGTGCGCAAGGGTGTGGCTATAAAGTACCTCCGGAAGGC
GCTCAAGAAGAAGGAAGTTGAGATGATGAGGGTGCGCCAGGCCGTGGATT
TGAGGGACATCGACCTCCGGAACCTCTCCGACCGGATGGATGGCTTGTAC
CGGACCTTGTCTGTTGTTCGCCGGTGCGAATGAGTGAGGGAGAACGCGTA
TTTTAAGCAACGCCTTCCGAAAGAAAGTTGTGTGACTGTCTTTTGTTATG
TTCTCCTTCCTCGTGTATCCACGTTCCGGAAGCGGGGATTATCATGCCGT
TTCCCCCCCGCTCCTTCCCC back to topCoding sequence (CDS) from alignment at F-serratus_M_contig792:182266..186035+ >mRNA_F-serratus_M_contig792.19213.1 ID=mRNA_F-serratus_M_contig792.19213.1|Name=mRNA_F-serratus_M_contig792.19213.1|organism=Fucus serratus male|type=CDS|length=2430bp|location=Sequence derived from alignment at F-serratus_M_contig792:182266..186035+ (Fucus serratus male) ATGGAAGAAAAGAATCCTGACGGTGACAGTGAGGACGATGATAGTGGTGC CATAGCTCGCAAGCTCCGAAGGGATCGATGGAAGAAAAGAATCCTGACGG TGACAGTGAGGACGATGATAGTGGTGCCATAGCTCGCAAGCTCCGAAGGG ATCGGGTAAGAAAGCGATCCCGCGCTCATTCGCGAAGAAAACTGGTGGGA GCGTTGACCGCGCCCACGGACAACAAGGGTGAGAGGATTGACGTCCACAC GGCCGCGTACAGCGGGCACCTGGGCCTCCTCAAGTCGTACGTCTCGCAGG GGGGCGACCTTGAGGGTAAGAAAGCGATCCCGCGCTCATTCGCGAAGAAA ACTGGTGGGAGCGTTGACCGCGCCCACGGACAACAAGGGTGAGAGGATTG ACGTCCACACGGCCGCGTACAGCGGGCACCTGGGCCTCCTCAAGTCGTAC GTCTCGCAGGGGGGCGACCTTGAGGTTCCCGATCAGTTCCAGTCGACTCC TCTGATGCTTGCCTCAGAGCGAGGCCACACGGAGATTGTCGCTGTTCTTC TCGCGGCGGGAGCGGATGTGGGCTGCATGGACGAGAACGGAAACAGCGCT CTACACCTGGCGTGCTACTATGGCAACTACGGCGTGGTGGAGCTGCTGCT GGCCGTTGACGTGGACCTCAATGTTCCCGATCAGTTCCAGTCGACTCCTC TGATGCTTGCCTCAGAGCGAGGCCACACGGAGATTGTCGCTGTTCTTCTC GCGGCGGGAGCGGATGTGGGCTGCATGGACGAGAACGGAAACAGCGCTCT ACACCTGGCGTGCTACTATGGCAACTACGGCGTGGTGGAGCTGCTGCTGG CCGTTGACGTGGACCTCAATGCCCTTGATTCCGAGGGAAGAACCCCGCTC GATCTCGCCACCGATACAACCGTGTGGCGCATGGTGAGGACTGAAGAAGT TGTCCGCCAGTCCGGGGAAACCTTCGACCTGATGGCGGCCGTGGAGGCAA ACGATACCCAGGCGCTCGGCAGGTTCATCGCCATGGGGCAGGAGGCCTGC GGTTACCCGAGCAACCCCATGGCCGTGCCCCAGGCCGCCCAACGCCTCCG GCTCGACAGGCAGGGCCGTGGCGGAATGACGGCGGTTCACCTCGCCGCGT TCCACGGCTACGCAGACGCGCTTCAGATGTTACTTGACGGAGGCGCGGAT CCGAACGCGATCTGCGAAGACGGAGAGACCCCTCTGCACACCGCCTGCAC GGGAGGGAGCTTTCGTTGCGTCACGCTCCTCCTCGATAATGGCCCTTGAT TCCGAGGGAAGAACCCCGCTCGATCTCGCCACCGATACAACCGTGTGGCG CATGGTGAGGACTGAAGAAGTTGTCCGCCAGTCCGGGGAAACCTTCGACC TGATGGCGGCCGTGGAGGCAAACGATACCCAGGCGCTCGGCAGGTTCATC GCCATGGGGCAGGAGGCCTGCGGTTACCCGAGCAACCCCATGGCCGTGCC CCAGGCCGCCCAACGCCTCCGGCTCGACAGGCAGGGCCGTGGCGGAATGA CGGCGGTTCACCTCGCCGCGTTCCACGGCTACGCAGACGCGCTTCAGATG TTACTTGACGGAGGCGCGGATCCGAACGCGATCTGCGAAGACGGAGAGAC CCCTCTGCACACCGCCTGCACGGGAGGGAGCTTTCGTTGCGTCACGCTCC TCCTCGATAATGGGTCCAACCCTCTCGCTACCGACGGTAAGGGCCTCGTG CCCTGCGAGAAGCCAATTGCGGCGAGGCGGGAAGACATGAAGAAGCTCCT GGAGACGAAGGCTTTCCAGGGGTCCAACCCTCTCGCTACCGACGGTAAGG GCCTCGTGCCCTGCGAGAAGCCAATTGCGGCGAGGCGGGAAGACATGAAG AAGCTCCTGGAGACGAAGGCTTTCCAGGCTACCCCGGCAAACCTTTTAGA TGTCCGGGCCGACCTCGCCGAGGTGGCGCTCCAGATCGACGCCGAGGAGG AATTGTTTGTGCGCAAGGGTGTGGCTATAAAGTACCTCCGGAAGGCGCTC AAGAAGAAGGAAGTTGAGATGATGAGGGTGCGCCAGGCCGTGGATTTGAG GGACATCGACCTCCGGAACCTCTCCGACCGGATGGATGGCTTGTACCGGA CCTTGTCTGTTGTTCGCCGGTGCGAATGACTACCCCGGCAAACCTTTTAG ATGTCCGGGCCGACCTCGCCGAGGTGGCGCTCCAGATCGACGCCGAGGAG GAATTGTTTGTGCGCAAGGGTGTGGCTATAAAGTACCTCCGGAAGGCGCT CAAGAAGAAGGAAGTTGAGATGATGAGGGTGCGCCAGGCCGTGGATTTGA GGGACATCGACCTCCGGAACCTCTCCGACCGGATGGATGGCTTGTACCGG ACCTTGTCTGTTGTTCGCCGGTGCGAATGA back to top
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