mRNA_F-serratus_M_contig791.19208.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig791.19208.1
Unique NamemRNA_F-serratus_M_contig791.19208.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig791.19208.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE)

HSP 1 Score: 179 bits (454), Expect = 4.220e-50
Identity = 103/259 (39.77%), Postives = 154/259 (59.46%), Query Frame = 1
Query:    4 QHLYVESMARRFDVKKSTKIPATSGVPTLSKADEPRNPEEKEEMRKFPYREAVGALRWTAMMTRPDIACAVRAVARFFENPGPAHKKAVMRIFQYLLHTKEWGITYGRQG-CGLCMEAYTDSNFGACLDTRRSVSGAVLVLAKGAISWHSRMQEMTASGTSEAEYIALSEVVKRVLFLRQVQEFMEPLMRVGAVNVFEDNEGAIKLAASKHASRRTNHIGVKHHLVRHASDAQRVRVAYVRSEDQYASLLTEPLNMQKF 777
            Q  Y E +   F V+   +IP   G+  LS+ D+       EE+  +P+RE +G+L W A  TRPDIA AVRAVAR+  +P   H +A + I  Y++ T + GIT+ R    GL ME + D+++ +    RRSVSG +++   G ISW SR Q+     T+EAEY++L++V+K VLFLRQV  FM P   +  + VFEDN+GAI+LA +  ++  + HI V+HH +R     + + + +V S  Q+A  LT+ L+   F
Sbjct:  176 QQTYAEELGMEFGVEYGKEIPLPVGL-KLSEFDQD------EEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKALHAGDF 427          
BLAST of mRNA_F-serratus_M_contig791.19208.1 vs. uniprot
Match: A0A6H5KD60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD60_9PHAE)

HSP 1 Score: 172 bits (435), Expect = 8.890e-49
Identity = 99/259 (38.22%), Postives = 151/259 (58.30%), Query Frame = 1
Query:    4 QHLYVESMARRFDVKKSTKIPATSGVPTLSKADEPRNPEEKEEMRKFPYREAVGALRWTAMMTRPDIACAVRAVARFFENPGPAHKKAVMRIFQYLLHTKEWGITYGRQG-CGLCMEAYTDSNFGACLDTRRSVSGAVLVLAKGAISWHSRMQEMTASGTSEAEYIALSEVVKRVLFLRQVQEFMEPLMRVGAVNVFEDNEGAIKLAASKHASRRTNHIGVKHHLVRHASDAQRVRVAYVRSEDQYASLLTEPLNMQKF 777
            Q  Y + +   F V+   +I    G+  LS+ D+       EE+  +P+RE +G+L W A  TRP+IA A RAVAR+  +P   H +A + I  Y++ T + GIT+GR    GL ME + D+++ +    RRSVSG  ++  +G ISW SR Q+     T+EAEY++L++V+K VLFLRQV  FM P   +  + VFEDN+GAI+LA +  ++  + H  V+HH +      + + + YV S  Q+A  LT+ L+   F
Sbjct:   31 QQTYAQELGMDFGVEYGKEILFPVGL-KLSEFDQD------EEVVSWPFRELIGSLMWLATQTRPNIANAARAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFGRGSVAGLSMEVFADADYASKAADRRSVSGGFVMCGRGCISWFSRTQQCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHFDVRHHFIGELVGRKEISIFYVESAYQHADFLTKALHFGDF 282          
BLAST of mRNA_F-serratus_M_contig791.19208.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE)

HSP 1 Score: 179 bits (454), Expect = 9.080e-49
Identity = 103/259 (39.77%), Postives = 154/259 (59.46%), Query Frame = 1
Query:    4 QHLYVESMARRFDVKKSTKIPATSGVPTLSKADEPRNPEEKEEMRKFPYREAVGALRWTAMMTRPDIACAVRAVARFFENPGPAHKKAVMRIFQYLLHTKEWGITYGRQG-CGLCMEAYTDSNFGACLDTRRSVSGAVLVLAKGAISWHSRMQEMTASGTSEAEYIALSEVVKRVLFLRQVQEFMEPLMRVGAVNVFEDNEGAIKLAASKHASRRTNHIGVKHHLVRHASDAQRVRVAYVRSEDQYASLLTEPLNMQKF 777
            Q  Y E +   F V+   +IP   G+  LS+ D+       EE+  +P+RE +G+L W A  TRPDIA AVRAVAR+  +P   H +A + I  Y++ T + GIT+ R    GL ME + D+++ +    RRSVSG +++   G ISW SR Q+     T+EAEY++L++V+K VLFLRQV  FM P   +  + VFEDN+GAI+LA +  ++  + HI V+HH +R     + + + +V S  Q+A  LT+ L+   F
Sbjct:  350 QQTYAEELGMEFGVEYGKEIPLPVGL-KLSEFDQD------EEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKALHAGDF 601          
BLAST of mRNA_F-serratus_M_contig791.19208.1 vs. uniprot
Match: A0A6H5KR24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR24_9PHAE)

HSP 1 Score: 172 bits (436), Expect = 1.470e-48
Identity = 102/256 (39.84%), Postives = 151/256 (58.98%), Query Frame = 1
Query:    4 QHLYVESMARRFDVKKSTKIPATSGVPTLSKADEPRNPEEKEEMRKFPYREAVGALRWTAMMTRPDIACAVRAVARFFENPGPAHKKAVMRIFQYLLHTKEWGITYGRQG-CGLCMEAYTDSNFGACLDTRRSVSGAVLVLAKGAISWHSRMQEMTASGTSEAEYIALSEVVKRVLFLRQVQEFMEPLMRVGAVNVFEDNEGAIKLAASKHASRRTNHIGVKHHLVRHASDAQR-VRVAYVRSEDQYASLLTEPLN 765
            Q  Y E +   F V+   +IP   G+  LS+ D+       EE+  +P+RE +G+L W A  TRPDIA AVRAVAR+  +P   H +A + I  Y++ T + GIT+ R    GL ME + D+++ +    RRSVSG +++   G ISW SR Q+     T+EAEY++L++V+K VLFLRQV  FM P   +  + VFEDN+GAI+LA +  ++    HI V+HH +R     ++ + + +V S  Q+A  LT  L 
Sbjct:   75 QQTYAEELGMEFGVEYGKEIPLPVGM-KLSEFDQD------EEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDSGITFRRGSIAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNLKHIDVRHHFIRELVVGRKEISIFHVESAYQHADFLTRALT 323          
BLAST of mRNA_F-serratus_M_contig791.19208.1 vs. uniprot
Match: A0A6H5KPF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPF9_9PHAE)

HSP 1 Score: 172 bits (437), Expect = 1.860e-48
Identity = 103/256 (40.23%), Postives = 144/256 (56.25%), Query Frame = 1
Query:   13 YVESMARRFDVKKSTKIPATSGVPTLSKADEPRNPEEKEEMRKFPYREAVGALRWTAMMTRPDIACAVRAVARFFENPGPAHKKAVMRIFQYLLHTKEWGITYGRQGC-GLCMEAYTDSNFGACLDTRRSVSGAVLVLAKGAISWHSRMQEMTASGTSEAEYIALSEVVKRVLFLRQVQEFMEPLMRVGAVNVFEDNEGAIKLAASKHASRRTNHIGVKHHLVRHASDAQRVRVAYVRSEDQYASLLTEPLNMQKF 777
            + + +A  + V   T +P +SGV  LS  D        EE   FP+RE VG+L W A  TRPDIA AVRAVAR+  +P   H  A M I  Y   T   GI++ R    G  ++ Y D++F +    RRSVSG ++    G +SW SR Q+     T+EA Y+AL +VVK +LFLRQV  FM P + +  + VFEDN+GAI+LA +  ++  + HI V+HH +R   + + + V +V S  Q A  LT+ L    F
Sbjct:   92 FTDELAAEYGVAVGTSVPMSSGV-KLSDFDAD------EEATDFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKRVHWDAAMGILGYAKRTSYMGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGVVSWFSRTQKCVTLSTTEAGYVALGDVVKEILFLRQVWRFMLPKVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKRLPKDAF 340          
BLAST of mRNA_F-serratus_M_contig791.19208.1 vs. uniprot
Match: A0A6H5JFG2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG2_9PHAE)

HSP 1 Score: 175 bits (444), Expect = 2.060e-48
Identity = 103/259 (39.77%), Postives = 147/259 (56.76%), Query Frame = 1
Query:    4 QHLYVESMARRFDVKKSTKIPATSGVPTLSKADEPRNPEEKEEMRKFPYREAVGALRWTAMMTRPDIACAVRAVARFFENPGPAHKKAVMRIFQYLLHTKEWGITYGRQGC-GLCMEAYTDSNFGACLDTRRSVSGAVLVLAKGAISWHSRMQEMTASGTSEAEYIALSEVVKRVLFLRQVQEFMEPLMRVGAVNVFEDNEGAIKLAASKHASRRTNHIGVKHHLVRHASDAQRVRVAYVRSEDQYASLLTEPLNMQKF 777
            Q  + + +A  + V     +P +SGV  LS  D        E   +FP+RE VG+L W A  TRPDIA AVRAVAR+  +P   H  A M I  Y   T  +GI++ R    G  ++ Y D++F +    RRSVSG ++    GA+SW SR Q+     T+EAEY+AL +VVK +LFLRQ+  FM P + +  + VFEDN+GAI+LA +  ++  + HI V+HH +R   + + + V +V S  Q A  LT+ L    F
Sbjct:  200 QQTFTDELAAEYGVVGGRSVPMSSGV-KLSDFDAD------EVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLPKDAF 451          
BLAST of mRNA_F-serratus_M_contig791.19208.1 vs. uniprot
Match: A0A6H5L0C9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0C9_9PHAE)

HSP 1 Score: 181 bits (458), Expect = 2.660e-48
Identity = 102/259 (39.38%), Postives = 155/259 (59.85%), Query Frame = 1
Query:    4 QHLYVESMARRFDVKKSTKIPATSGVPTLSKADEPRNPEEKEEMRKFPYREAVGALRWTAMMTRPDIACAVRAVARFFENPGPAHKKAVMRIFQYLLHTKEWGITYGRQG-CGLCMEAYTDSNFGACLDTRRSVSGAVLVLAKGAISWHSRMQEMTASGTSEAEYIALSEVVKRVLFLRQVQEFMEPLMRVGAVNVFEDNEGAIKLAASKHASRRTNHIGVKHHLVRHASDAQRVRVAYVRSEDQYASLLTEPLNMQKF 777
            Q  Y E +   F V+   +IP   G+  LS+ D+       EE+  +P+RE +G+L W A  TRPDIA AVRAVAR++ +P   H +A + I   ++ T + GIT+ R+   GL +E + D+++ +    RRSVSG +++   G ISW SR Q+     T+EAEY++L++V+K VLFLRQV  FM P   +  + VFEDN+GAI+LA +  ++  + HI V+HH +R     + + + +V S  QYA  LT+ L+   F
Sbjct:  635 QQTYAEELGMEFGVEYGKEIPLPVGL-KLSEFDQD------EEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYYASPKEIHWRAGLGILGCVVRTSDLGITFRRRSVAGLSIEVFADADYASKAADRRSVSGGLVICGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMSCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQYADFLTKALHAGDF 886          
BLAST of mRNA_F-serratus_M_contig791.19208.1 vs. uniprot
Match: A0A6H5JTK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTK6_9PHAE)

HSP 1 Score: 170 bits (430), Expect = 3.890e-48
Identity = 98/248 (39.52%), Postives = 150/248 (60.48%), Query Frame = 1
Query:   37 FDVKKSTKIPATSGVPTLSKADEPRNPEEKEEMRKFPYREAVGALRWTAMMTRPDIACAVRAVARFFENPGPAHKKAVMRIFQYLLHTKEWGITYGRQG-CGLCMEAYTDSNFGACLDTRRSVSGAVLVLAKGAISWHSRMQEMTASGTSEAEYIALSEVVKRVLFLRQVQEFMEPLMRVGAVNVFEDNEGAIKLAASKHASRRTNHIGVKHHLVRHASDAQRVRVAYVRSEDQYASLLTEPLNMQKF 777
            F V+   +IP   G+  LS+ D+       EE+  +P+RE +G+L W A  TRPDIA AVRAVAR+  +P   H +A + I  Y++ T + GIT+ R    GL ME + D+++ +    RRSVSG +++   G +SW SR Q+     T+EAEY++L++V+K VLFLRQV+ F+ P   +  + V EDN+GAI+LA +  ++  + HI V+HH +R     + + + +V S  Q+A  LT+ LN   F
Sbjct:    3 FGVEYGKEIPLPVGL-KLSEFDQD------EEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCMSWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVRRFVLPEAGMPCIPVLEDNQGAIQLAQNPISNSTSKHIDVRHHFIRELVRRKEISIFHVESAYQHADFLTKALNAGDF 243          
BLAST of mRNA_F-serratus_M_contig791.19208.1 vs. uniprot
Match: A0A6H5K2R1_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2R1_9PHAE)

HSP 1 Score: 179 bits (454), Expect = 1.320e-47
Identity = 103/259 (39.77%), Postives = 154/259 (59.46%), Query Frame = 1
Query:    4 QHLYVESMARRFDVKKSTKIPATSGVPTLSKADEPRNPEEKEEMRKFPYREAVGALRWTAMMTRPDIACAVRAVARFFENPGPAHKKAVMRIFQYLLHTKEWGITYGRQG-CGLCMEAYTDSNFGACLDTRRSVSGAVLVLAKGAISWHSRMQEMTASGTSEAEYIALSEVVKRVLFLRQVQEFMEPLMRVGAVNVFEDNEGAIKLAASKHASRRTNHIGVKHHLVRHASDAQRVRVAYVRSEDQYASLLTEPLNMQKF 777
            Q  Y E +   F V+   +IP   G+  LS+ D+       EE+  +P+RE +G+L W A  TRPDIA AVRAVAR+  +P   H +A + I  Y++ T + GIT+ R    GL ME + D+++ +    RRSVSG +++   G ISW SR Q+     T+EAEY++L++V+K VLFLRQV  FM P   +  + VFEDN+GAI+LA +  ++  + HI V+HH +R     + + + +V S  Q+A  LT+ L+   F
Sbjct:  871 QQTYAEELGMEFGVEYGKEIPLPVGL-KLSEFDQD------EEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHAEFLTKALHAGDF 1122          
BLAST of mRNA_F-serratus_M_contig791.19208.1 vs. uniprot
Match: A0A6H5KRB4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRB4_9PHAE)

HSP 1 Score: 169 bits (429), Expect = 1.320e-47
Identity = 100/259 (38.61%), Postives = 145/259 (55.98%), Query Frame = 1
Query:    4 QHLYVESMARRFDVKKSTKIPATSGVPTLSKADEPRNPEEKEEMRKFPYREAVGALRWTAMMTRPDIACAVRAVARFFENPGPAHKKAVMRIFQYLLHTKEWGITYGRQGC-GLCMEAYTDSNFGACLDTRRSVSGAVLVLAKGAISWHSRMQEMTASGTSEAEYIALSEVVKRVLFLRQVQEFMEPLMRVGAVNVFEDNEGAIKLAASKHASRRTNHIGVKHHLVRHASDAQRVRVAYVRSEDQYASLLTEPLNMQKF 777
            Q  + + +A  + V     +P +SGV  LS  D        E   +FP+RE VG+L W A  TRPDIA AVRAVAR+  +P   H  A M I  Y   T  +GI++ R    G  ++ Y D++F +    RRSVSG ++    GA+SW SR Q+     T+EAEY+AL +VVK +LFLRQ+  F  P + +  + VFED +G I+LA +  ++  + HI V+HH +R   + + + V +V S  Q A  LT+ L+   F
Sbjct:   58 QQTFTDELAAEYGVVGGRSVPMSSGV-KLSDFDAD------EVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFTLPQVGMPCIPVFEDIQGVIQLAQNPISNSNSKHINVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLSKDAF 309          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig791.19208.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JLN0_9PHAE4.220e-5039.77Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KD60_9PHAE8.890e-4938.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQB8_9PHAE9.080e-4939.77Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KR24_9PHAE1.470e-4839.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KPF9_9PHAE1.860e-4840.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JFG2_9PHAE2.060e-4839.77Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L0C9_9PHAE2.660e-4839.38Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JTK6_9PHAE3.890e-4839.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K2R1_9PHAE1.320e-4739.77Integrase catalytic domain-containing protein n=3 ... [more]
A0A6H5KRB4_9PHAE1.320e-4738.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig791contigF-serratus_M_contig791:346855..347637 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score176.0
Seed ortholog evalue2.2e-41
Seed eggNOG ortholog164328.Phyra85763
Hectar predicted targeting categoryother localisation
EggNOG free text desc.transposition, RNA-mediated
EggNOG OGs3QGIS@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons1
Model size783
Cds size759
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932355.6979852-UTR-F-serratus_M_contig791:346854..3468781622932355.6979852-UTR-F-serratus_M_contig791:346854..346878Fucus serratus maleUTRF-serratus_M_contig791 346855..346878 +
1690964268.5794263-UTR-F-serratus_M_contig791:346854..3468781690964268.5794263-UTR-F-serratus_M_contig791:346854..346878Fucus serratus maleUTRF-serratus_M_contig791 346855..346878 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932355.716702-CDS-F-serratus_M_contig791:346878..3476371622932355.716702-CDS-F-serratus_M_contig791:346878..347637Fucus serratus maleCDSF-serratus_M_contig791 346879..347637 +
1690964268.5932362-CDS-F-serratus_M_contig791:346878..3476371690964268.5932362-CDS-F-serratus_M_contig791:346878..347637Fucus serratus maleCDSF-serratus_M_contig791 346879..347637 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig791.19208.1prot_F-serratus_M_contig791.19208.1Fucus serratus malepolypeptideF-serratus_M_contig791 346879..347637 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig791.19208.1

>prot_F-serratus_M_contig791.19208.1 ID=prot_F-serratus_M_contig791.19208.1|Name=mRNA_F-serratus_M_contig791.19208.1|organism=Fucus serratus male|type=polypeptide|length=253bp
MARRFDVKKSTKIPATSGVPTLSKADEPRNPEEKEEMRKFPYREAVGALR
WTAMMTRPDIACAVRAVARFFENPGPAHKKAVMRIFQYLLHTKEWGITYG
RQGCGLCMEAYTDSNFGACLDTRRSVSGAVLVLAKGAISWHSRMQEMTAS
GTSEAEYIALSEVVKRVLFLRQVQEFMEPLMRVGAVNVFEDNEGAIKLAA
SKHASRRTNHIGVKHHLVRHASDAQRVRVAYVRSEDQYASLLTEPLNMQK
FC*
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mRNA from alignment at F-serratus_M_contig791:346855..347637+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig791.19208.1 ID=mRNA_F-serratus_M_contig791.19208.1|Name=mRNA_F-serratus_M_contig791.19208.1|organism=Fucus serratus male|type=mRNA|length=783bp|location=Sequence derived from alignment at F-serratus_M_contig791:346855..347637+ (Fucus serratus male)
GACCAACACTTGTACGTGGAGTCAATGGCAAGAAGGTTTGACGTCAAGAA GTCAACTAAGATACCGGCTACGTCAGGGGTGCCGACGCTCTCAAAGGCGG ATGAACCACGGAACCCAGAGGAGAAGGAGGAAATGAGGAAGTTCCCGTAC CGAGAGGCAGTGGGGGCGCTCAGGTGGACGGCGATGATGACACGGCCTGA TATTGCGTGCGCCGTACGCGCTGTGGCCAGGTTCTTCGAAAACCCTGGGC CGGCGCATAAGAAGGCAGTGATGAGGATTTTCCAGTATCTCCTTCACACG AAAGAATGGGGGATTACGTACGGTAGACAGGGCTGTGGACTTTGCATGGA AGCGTATACGGACTCGAATTTCGGAGCCTGCCTGGACACAAGACGGTCGG TTTCGGGTGCGGTGTTGGTGTTGGCGAAGGGAGCGATCAGCTGGCACTCG AGGATGCAAGAAATGACAGCATCGGGTACCTCGGAGGCAGAATACATTGC CTTATCAGAGGTGGTAAAGAGAGTACTATTTTTGAGACAGGTGCAGGAGT TTATGGAACCGTTGATGAGGGTCGGTGCAGTAAATGTGTTCGAGGATAAT GAGGGGGCCATCAAGCTGGCCGCAAGCAAGCATGCTAGCCGTAGGACTAA TCATATTGGTGTGAAACATCATCTAGTAAGGCACGCGTCTGATGCGCAAA GGGTTAGAGTAGCGTACGTGAGGTCGGAGGATCAGTACGCGAGTTTGCTC ACAGAACCGCTAAACATGCAAAAGTTTTGTTAA
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Coding sequence (CDS) from alignment at F-serratus_M_contig791:346855..347637+

>mRNA_F-serratus_M_contig791.19208.1 ID=mRNA_F-serratus_M_contig791.19208.1|Name=mRNA_F-serratus_M_contig791.19208.1|organism=Fucus serratus male|type=CDS|length=1518bp|location=Sequence derived from alignment at F-serratus_M_contig791:346855..347637+ (Fucus serratus male)
ATGGCAAGAAGGTTTGACGTCAAGAAGTCAACTAAGATACCGGCTACGTC
AGGGGTGCCGACGCTCTCAAAGGCGGATGAACCACGGAACCCAGAGGAGA
AGGAGGAAATGAGGAAGTTCCCGTACCGAGAGGCAGTGGGGGCGCTCAGG
TGGACGGCGATGATGACACGGCCTGATATTGCGTGCGCCGTACGCGCTGT
GGCCAGGTTCTTCGAAAACCCTGGGCCGGCGCATAAGAAGGCAGTGATGA
GGATTTTCCAGTATCTCCTTCACACGAAAGAATGGGGGATTACGTACGGT
AGACAGGGCTGTGGACTTTGCATGGAAGCGTATACGGACTCGAATTTCGG
AGCCTGCCTGGACACAAGACGGTCGGTTTCGGGTGCGGTGTTGGTGTTGG
CGAAGGGAGCGATCAGCTGGCACTCGAGGATGCAAGAAATGACAGCATCG
GGTACCTCGGAGGCAGAATACATTGCCTTATCAGAGGTGGTAAAGAGAGT
ACTATTTTTGAGACAGGTGCAGGAGTTTATGGAACCGTTGATGAGGGTCG
GTGCAGTAAATGTGTTCGAGGATAATGAGGGGGCCATCAAGCTGGCCGCA
AGCAAGCATGCTAGCCGTAGGACTAATCATATTGGTGTGAAACATCATCT
AGTAAGGCACGCGTCTGATGCGCAAAGGGTTAGAGTAGCGTACGTGAGGT
CGGAGGATCAGTACGCGAGTTTGCTCACAGAACCGCTAAACATGCAAAAG
TTTTGTTAAATGGCAAGAAGGTTTGACGTCAAGAAGTCAACTAAGATACC
GGCTACGTCAGGGGTGCCGACGCTCTCAAAGGCGGATGAACCACGGAACC
CAGAGGAGAAGGAGGAAATGAGGAAGTTCCCGTACCGAGAGGCAGTGGGG
GCGCTCAGGTGGACGGCGATGATGACACGGCCTGATATTGCGTGCGCCGT
ACGCGCTGTGGCCAGGTTCTTCGAAAACCCTGGGCCGGCGCATAAGAAGG
CAGTGATGAGGATTTTCCAGTATCTCCTTCACACGAAAGAATGGGGGATT
ACGTACGGTAGACAGGGCTGTGGACTTTGCATGGAAGCGTATACGGACTC
GAATTTCGGAGCCTGCCTGGACACAAGACGGTCGGTTTCGGGTGCGGTGT
TGGTGTTGGCGAAGGGAGCGATCAGCTGGCACTCGAGGATGCAAGAAATG
ACAGCATCGGGTACCTCGGAGGCAGAATACATTGCCTTATCAGAGGTGGT
AAAGAGAGTACTATTTTTGAGACAGGTGCAGGAGTTTATGGAACCGTTGA
TGAGGGTCGGTGCAGTAAATGTGTTCGAGGATAATGAGGGGGCCATCAAG
CTGGCCGCAAGCAAGCATGCTAGCCGTAGGACTAATCATATTGGTGTGAA
ACATCATCTAGTAAGGCACGCGTCTGATGCGCAAAGGGTTAGAGTAGCGT
ACGTGAGGTCGGAGGATCAGTACGCGAGTTTGCTCACAGAACCGCTAAAC
ATGCAAAAGTTTTGTTAA
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