mRNA_F-serratus_M_contig790.19187.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig790.19187.1 vs. uniprot
Match: D8LIG7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIG7_ECTSI) HSP 1 Score: 726 bits (1875), Expect = 9.110e-250 Identity = 451/871 (51.78%), Postives = 538/871 (61.77%), Query Frame = 1
Query: 1 MAGVAGSEDEDFLEEYFDVVILSTGLGSSILAAALAKSGKRVLHLDRNDHYGDRIASFSFLQLLDWVERHRESSDEGR-------------STEPSSEPDFDLERAGKAIARAHAREEMDKKEKMKKNRAANSAGEKGNGERVVETCAKDATEETADKSISPAADPAVYDGGKQEVGEAAQTC--TEQEHDG-VNVDKTVEEDADK----------RFRSFELRLLPLSHHGCQTRAGAPSNACTQERLQQKSSEDAAAAAAFGRPVRPTAPSHPAWIGRREPRKASEGGNVDGGRREVESLHPAFWSYRVGRRPDPTELVRLSRSFNLDLTSQVFLATGAAVDAMVSSGVANYLEFKDMPALYMGSDDAPVPCSKADVFGTKLLTPLEKRRLMRFLLFASDWGLQRAGEDVSARNEAGLGRGRSLRRPQNREAASGDFDAVAHAGRPFSEFLESCGLPERVRAMVTYALALLPGGEGVGSGGDKGAEENATTTTEDGLEAVYRHLSALGRFGETAFISPIYGLGELPQAFCRMAAVYGAVYVLRRQLKGALIDGGTGR*CVGVVDESGRPLACGSLVIGEEYFIPPPLAKTASESRENPGSPDHLAPSLPSTPAEE---TPDPSGKPIAKSSRKDPYR----RQRQRQRLLRRIVVASGPAVSPDGDGRGLCVLPPGLRCVGNTSAVHVVSLDESTAACPGGLDGACVLHLTTTVVLSGDAD-------------------------------AETTXXXXXXXXXXXXXRAAKELLAAAGVEEIWSVGFSWSIGDQVALAEEDLPANVAICQRPRQELYLHEVFVQAERAFSRLCPGEPFWPPPPNASNGED-EYQAEMLRAAAASAMT 2418
M G AG D D+LE+Y+D ++LSTGLGSSILAAALAK+GK VL+LD +++YG ASFSF QLLDW E + G+ ST +++ D A AIARAHAR E+ K+ +MK A + GE TEQ+ DG + T EE A R ++ L LLPLS+HGC+TRAGAPS+AC ER ++K +EDAAAA+ R PSHPAW GRR+P +GG V G E E +HP+FW YR RRP +LVRLSRSFNLDLTSQV LATG AVDA+V+SGVA+YLEFKDM +ADVFGTKLLTPLEKRRLM+FLLFASDWGLQR GEDV +RNEAGLGRGRSLRRPQNREAASGDFDA AHAG+PFS FL CGLPERVRAM+T+ALALLPGG+ G GG TTE+GLEAVYRHLSALGRFGETAFI+P+YG+GEL Q+FCRMAAV+GA+ +LRRQL+GA++D +GR CVGVVD++GR AC LV+G E+F P T ++ TPA E P P P R R RLLRR+V+ASGP V+P+G GRGLCVLPPGL+ +GN +AVHVVSLD++TAACP L GACV+HLTTT +G+AD A RA++ELLAAAGVEEIWS+GFSW I Q EDLPAN+ +C+RP QELYLH+V VQAER F+RL PGEPFWPPP A GED + QA+ML AAA++ T
Sbjct: 1 MNGAAGDVD-DYLEDYYDAIVLSTGLGSSILAAALAKAGKSVLYLDCHEYYGQDSASFSFTQLLDWAEANGRKHHGGKGGVAGDGGQTCAISTNQAAKM-VDSADAWTAIARAHARNELKKEREMK----ATAGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQTEQQRDGGEEKEPTAEEAAXXXXXXXXAAAARLQTLNLHLLPLSYHGCRTRAGAPSDACVPERERRKVAEDAAAASGRFLGGRQPQPSHPAWAGRRDPTMRGDGGAVGG---EEEGVHPSFWGYRTERRPGAADLVRLSRSFNLDLTSQVLLATGPAVDALVNSGVASYLEFKDM---------------QADVFGTKLLTPLEKRRLMKFLLFASDWGLQRRGEDVLSRNEAGLGRGRSLRRPQNREAASGDFDAEAHAGKPFSGFLRGCGLPERVRAMITHALALLPGGDEGGEGGG--------ATTEEGLEAVYRHLSALGRFGETAFIAPLYGVGELSQSFCRMAAVHGAICMLRRQLRGAVVDRNSGR-CVGVVDDAGRAFACSFLVVGGEFFAASPPTNTHQPTK---------------TPAPERLSAPHPXXXXXXXXXETLPTAGTGSSSRVRGRLLRRVVLASGP-VAPEGRGRGLCVLPPGLQGIGNPAAVHVVSLDDTTAACPDNLGGACVIHLTTTTARAGEADDSSQAGGVGSQGAPTNQDREGEQEEVPAGANANVDGPGDEDGRDGVLGRASRELLAAAGVEEIWSLGFSWDI--QGPPRPEDLPANMVVCERPGQELYLHDVVVQAERDFARLFPGEPFWPPP--AGQGEDGDDQADMLEAAASAVTT 818
BLAST of mRNA_F-serratus_M_contig790.19187.1 vs. uniprot
Match: W7U8Q6_9STRA (Rab proteins geranylgeranyltransferase component a 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U8Q6_9STRA) HSP 1 Score: 205 bits (522), Expect = 4.180e-52 Identity = 241/862 (27.96%), Postives = 342/862 (39.68%), Query Frame = 1
Query: 28 EDFLEEYFDVVILSTGLGSSILAAALAKSGKRVLHLDRNDHYG-DRIASFSFLQLLDWVERHRESSDEGRSTEPSSEPDFDLERAGKAIARAHAREEMDKKEKMKKNRAANSAGEKGNGERVVETCAKDATEETADKSISPAADPAVYDGGKQEVGEAAQTCTEQEHDGVNVDKTVEEDADKRFRSFELRLLPLSHHGCQTRAGAPSNACTQERLQQKSSEDAAAAAAFGRPVRPTAPSHPAWIGRREPRKASEG-GNVDGGRREVESLHPAFWSYRVGRRPDPTELVRLSRSFNLDLTSQVFLATGAAVDAMVSSGVANYLEFKDMPALYMGSDDA-------------------------------------PVPCSKADVFGTKLLTPLEKRRLMRFLLFASDWGLQ-RAGEDVSARNEAGLGRGRSLRRPQNREAASGDFDAVAHAGRPFSEFLESCGLPERVRAMVTYALALLPG-GEGVGSGGDKGAEENATTTTEDGLEAVYRHLSALGRFGETAFISPIYGLGELPQAFCRMAAVYGAVYVLRRQLKGALIDGGTGR*CVGVVDESGRPLACGSLVIGEEYFIPPPLAKTASESRENPGSPDHLAPSLPSTPAEETPDPSGKPIAKSSRKDPYRRQRQRQRLLRRIVV---------------ASGPAVSPDGDGR----GLC--VLPPGL--RCVGNTS-----AVHVVSLDESTAACPGGLDGACVLHLTTTVVLSGDADAETTXXXXXXXXXXXXXRAAKELLA-AAGVEEIWSVGFSWSIGD----QVALAEEDLPA-----------------NVAICQRPRQELYLHEVFVQAERAFSRLCPGEPFWP 2340
ED LE +DV+I+ TGL +IL+AAL K GK VL+ ++ D+YG + SF L W + HR+S D AG A A V T AK + PA G D ++EDA + L +L H TR E L + A F PT+ A+ P +A EG GN W D L+ SR FNLDL+ V +A G + ++SSGVA+YLEF+ + AL++ S A PVPCSK DVF + LL EKR+LM+FL +DWG + ++G+ RNE LG+ RSL+RPQN+ S + + A+ RP +FLE + E ++ +V +ALALL G GEG GGD+G + TTE+GL ++ HL LG++G+TAF+ P+YG G+L QAF RM++V+G Y+LR Q + TG C+GV+D G + C +V+G+ R G D P G +S L+RR+V+ GP +G G C V+PPG C G+ AVH +D + P G +L+L T + S ++ E +AA +L + G +W+V + +G + A ++P+ NV +R E YL QA F +CPGE F P
Sbjct: 7 EDGLEHQYDVIIIGTGLVEAILSAALTKVGKSVLNYEKYDYYGGEDWPSFHLEALQAWAKAHRKSQDP----------------AGSARA-------------------------------VAPTQAKLWDTPCVLRRRWPARXXXXXXXXXXXXXXXXXXXX---XSGEGTDPPIDEDAPSKC----LMVLLPGHDSVSTRVIQ-----IDENLPPRG-RAGAEEGPFHTTDGPTSAPPRAFPSSSLPAQAEEGKGNTK-----------TCW--------DAESLIARSRDFNLDLSPVVLMAGGDMIAPLLSSGVASYLEFRPLYALFIASPSASAIRPSWKGTHQSEASESASTGENSSGPGVSRSVAFHPVPCSKPDVFSSHLLPAKEKRQLMKFLQAVADWGFRAQSGKSAQHRNEVELGQARSLQRPQNK--VSVELETDAYLQRPLRDFLEHSKMDEHLQWVVWHALALLLGPGEGGREGGDEGERQ---VTTEEGLRRIWGHLQGLGQYGKTAFLWPMYGGGDLTQAFSRMSSVWGGTYLLRDQPAQLAVHPETGN-CLGVLDRKGAAIKCEHVVLGQGNM------PAGWRGRRRRGGVDLRL------------GPEGGSGGRS--------------LVRRVVLLDCAPAALSWKTGGMGGGPGDDQAEEGARTETGTCGGVMPPGTVPGCSGDHPGHSHPAVHFYCVDPAARCSP---PGTFILYLAT-ISSSRSSEGEGGNSDETSTAAARLLKAATCILIDSPGEHVLWAVTYEQPLGGLSYPEGKEACGEIPSGPPPPCASSPPSPSVAKNVLTVERIAPEFYLDSPLKQARHLFESICPGEAFLP 747
BLAST of mRNA_F-serratus_M_contig790.19187.1 vs. uniprot
Match: UPI00077ADF05 (rab proteins geranylgeranyltransferase component A-like isoform X1 n=5 Tax=Acropora TaxID=6127 RepID=UPI00077ADF05) HSP 1 Score: 203 bits (516), Expect = 9.440e-52 Identity = 206/782 (26.34%), Postives = 323/782 (41.30%), Query Frame = 1
Query: 28 EDFLEEYFDVVILSTGLGSSILAAALAKSGKRVLHLDRNDHYGDRIASFSFLQLLDWVERHRESS----DEGRSTEPSSEPDFDLERAGKAIARAHAREEMDKKEKMKKNRAANSAGEKGNGERVVETCAKDAT-EETADKSISPAADPAVYDGGKQEVGEAAQTCTEQEHDGVNVDKTVEEDADKRFRSFELRLLPLSHHGCQTRAGAPSNACTQERLQQKSSEDAAAAAAFGRPVRPTAPSHPAWIGRREPRKASEGGNVDGGRREVESLHPAFWSYRVGRRPDPTELVRLSRSFNLDLTSQVFLATGAAVDAMVSSGVANYLEFKDMPAL--YMGSDDAPVPCSKADVFGTKLLTPLEKRRLMRFLLFASDWGLQRAGEDVSARNEAGLGRGRSLRRPQNREAASGDFDAVAHAGRPFSEFLESCGLPERVRAMVTYALALLPGGEGVGSGGDKGAEENATTTTEDGLEAVYRHLSALGRFGETAFISPIYGLGELPQAFCRMAAVYGAVYVLRRQLKGALIDGGTGR*CVGVVDESGRPLACGSLVIGEEYFIPPPLAKTASESRENPGSPDHLAPSLPSTPAEETPDPSGKPIAKSSRKDPYRRQRQRQRLLRRIVVASGPAVSPDGDGRGLCVLPPGLRCVGNTSAVHVVSLDESTAACPGGLDGACVLHLTTTVVLSGDADAETTXXXXXXXXXXXXXRAAKELLAAAGVEEIWSVGFSWSIGDQVALAEEDLPANVAICQRPRQELYLHEVFVQAERAFSRLCPGEPFWPPPPN 2352
ED L E +DV++L TG S++ AAL++ G +VLHLDRND+Y D+ +F+F L+ W++ ++ S +E + S+E +LE +A E+ K + K+ + + C + AT E A S P D K+E +A+ T + +D + S + GC + ++ T SED H R S + GRR PA +G EL R FN+DL+ ++ + G+ V+A++S+ +++YLEFK + + YM VPCS+ADVF + +++ +EKR LM+FL F D+ Q+ + +F+ +P+ EFL+S L ++ + +A+A++ A T+T +GL+A R L +LGR+G T FI P+YG GELPQAFCRM AV+G +Y LRR++ I T + C G++ + + L C L+ G Y P Q++ + + R V S +V P D + VL C G V V+ L S ACP GL V+HL + + S D + T A + +WS+ F+ +I D +A DLP+N+ + P + E QA+ F ++CPGE F PN
Sbjct: 3 EDDLPEDYDVIVLGTGFPESVVVAALSRVGMKVLHLDRNDYYSDQWGTFTFDSLVKWIDHYQTDSQADTEESEDKQASNEHP-NLESGTYTVAVPSRLHEI--KNVVVKSYFCEKPQRDSSNVEEPKMCMESATISEAATNSSEP------QDKEKEEQKDASGTSQKNLNDN------------NKDASGANLIKAEDSSGCAVESEMANDNPTGT---DSVSED----------------KHGEVTDRNTDSDGSVQSSTFPGRRVGNETKPA-----IGLGMTYDELKPYWRRFNIDLSPKLLFSRGSLVEALISANISHYLEFKSVTRMLTYMDGHVEEVPCSRADVFSSSVISIVEKRVLMKFLTFCLDFEQQQDQYE--------------------------EFEE-----KPYYEFLQSRRLTPNLQHFIIHAIAMV----------------KAETSTVEGLKATQRFLQSLGRYGNTPFIWPLYGAGELPQAFCRMCAVFGGLYCLRREVSAIAISQETKQ-CTGIISNN-KLLKCKWLITGHSYV-------------------------------------------------PENFQKECLQFVSRAVFISCGSVKPS-DEEFITVLSMPPSCKG-AEPVRVIELGPSAMACPKGL---YVVHLISKSLSSAMEDLKPTAEKLFHIRSGDEGDVASDKPTV-----LWSLYFNQAISDSSCVA--DLPSNLHVLDMPGVTIGFGEALQQAKEVFEKICPGEEFLQRVPN 629
BLAST of mRNA_F-serratus_M_contig790.19187.1 vs. uniprot
Match: A0A7S2WGP3_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WGP3_9STRA) HSP 1 Score: 200 bits (508), Expect = 2.680e-51 Identity = 162/520 (31.15%), Postives = 240/520 (46.15%), Query Frame = 1
Query: 892 SRSFNLDLTSQVFLATGAAVDAMVSSGVANYLEFKDMPALYM----GSDDAP-----------------VPCSKADVFGTKLLTPLEKRRLMRFLLFASDWGLQR-AGEDVSARNEAGLGRGRSLRRPQNRE-AASGDFDAVA--HAGRPFSEFLESCGLPERVRAMVTYALALLPGGEGVGSGGDKGAEENATTTTEDGLEAVYRHLSALGRFGETAFISPIYGLGELPQAFCRMAAVYGAVYVLRRQLKGALID------GGTG--------R*CVGVVDESGRPLACGSLVIGEEYFIPPPLAKTASESRENPGSPDHLAPSLPSTPAEETPDPSGKPIAKSSRKDPYRRQRQRQRLLRRIVVASGPAVSPDGDGRGLCVLPPGLRCVGNTSAVHVVSLDESTAACPGGLDGACVLHLTTTVVLSGDADAETTXXXXXXXXXXXXXRAAKELLAAAGVEEIWSVGFSWSIGDQVALAEEDLPANVAICQRPRQELYLHEVFVQAERAFSRLCPGEPF 2334
+R ++LDL+ A+G VD M+SSGV YLEF+ + +L + S AP VPCSK D+F +K LT EK +LM+ L F DWG Q +DV+ +++ L +GR+L RPQN +A G D RPFSEFL++ LP R+R V YA+A++ V + + T+T DGL A++RHL ALG+FG+TA ++P+YG E QAFCR+ AV G VYVLR+Q + +++ G G + VGV D+ G +AC + V+ +++ P A+E+ R ++RR+ G G R + V P G+++AV + +D+++ CP G G VLHLT + D++ R A LLA + E+W +GF+ + LA + + + + R L V QA F L PGEPF
Sbjct: 82 ARRWSLDLSPYAVFASGETVDLMISSGVGRYLEFRSVDSLCVLETSSSPPAPEALAAPAEASSPVTFWKVPCSKKDIFLSKALTREEKNKLMKLLRFCMDWGKQHFQHKDVATQDDVELTQGRALNRPQNSAGSAKGQVDPTPFLEQNRPFSEFLDAWALPRRLREAVLYAIAMIS--TPVPRPLTPESPTSPPTSTADGLAALHRHLFALGQFGDTALLAPLYGSAEFSQAFCRLCAVRGGVYVLRQQPRALVLETRAEEEGQQGEIAMKAHCKRVVGVCDQHGFTIACKAAVVAQDFLRP-----AAAEAL------------------------------------------HRTWIVRRVSAVHG--TPGQGMERVISVTLP-HAVDGHSAAVFAMHMDDTSLVCPAGR-GFSVLHLTMEWEATPAMDSKEAIEAGLREAGECLRRTAASLLALSQSRELWHLGFAKPRPRKPPLAAAKV-SGLHLAPRLAPHLDPFAVLAQARNIFQDLAPGEPF 547
BLAST of mRNA_F-serratus_M_contig790.19187.1 vs. uniprot
Match: A0A7S3PY16_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PY16_9STRA) HSP 1 Score: 197 bits (502), Expect = 1.500e-50 Identity = 162/557 (29.08%), Postives = 245/557 (43.99%), Query Frame = 1
Query: 895 RSFNLDLTSQVFLATGAAVDAMVSSGVANYLEFKDMPALYM-------------------GSDD------APVPCSKADVFGTKLLTPLEKRRLMRFLLFASDWGLQRAGED-------------------------------------VSARNEAGLGRGRSLRRPQNREAASGDFDAVAHA---GRPFSEFL-ESCGLPERVRAMVTYALALLPGGEGVGSGGDKGAEENATTTTEDGLEAVYRHLSALGRFGETAFISPIYGLGELPQAFCRMAAVYGAVYVLRRQLKGALIDGG---TGR*CVGVVDESGRPLACGSLVIGEEYFIPPPLAKTASESRENPGSPDHLAPSLPSTPAEETPDPSGKPIAKSSRKDPYRRQRQRQRLLRRIVVASGPAVSPD-----GDG---RGLCVLPPGLRCVGNTSAVHVVSLDESTAACPGGLDG--ACVLHLTTTVVLSGDADAETTXXXXXXXXXXXXXRAAKELLAAAG--VEEIWSVGFSWSIGDQVALAEEDLPANVAICQRPRQELYLHEVFVQAERAFSRLCP 2322
R F LDLT + A GAAV M+ SGVA Y EFK + L + DD + VPCSK DVF TKLL+P++KRRLM+FL +SD+ + ++ E+ V++ NE L +GRSL RPQN+ A+ D + + G PF +L E L E +R ++ +A+AL + D G E ++ TT+DG+ + RHL +LG+FG TAF+ P+YG GEL QAFCR AAV+G Y+LRR + ++ +G G E G L + G IP + K ++ + + R+ RRI + G +S GD R + ++PPG + N++ +H V+LDES + P DG VLHLTTT S + D E+ A ++E++ + FS+ + +++ + + IC+ L + FV+A+R F+++CP
Sbjct: 58 RHFALDLTPSLLYANGAAVSGMIDSGVAEYCEFKSVIGLELLMKQDEPRRRGVRGGANGQNGDDVVIPTLSRVPCSKRDVFQTKLLSPVDKRRLMKFLQISSDYAVAKSIENSANLASGSAKKSGNNEDEIVSTTENESSTVGDVEEEVVTSLNERQLQQGRSLYRPQNKSVATSDLEVLKQCINDGIPFEAYLTEHHKLSENMRNIIIHAMAL----GSCNAKSDDGPETSSNYTTQDGMNDLCRHLQSLGKFGGTAFLVPLYGSGELSQAFCRSAAVHGGTYLLRRGAQNITLNENREVSGVVLNGCTYEDGEVLPS-KHISGAHVIIPSKMLKKTKTLHDS--------------------------------------NKTKVRVYRRISIIRGKLLSKSKVGDAGDSDEQRHIIIIPPGDESIKNSNVIHGVALDESVSISPSSKDGFETTVLHLTTTSK-SNNEDFRYAHGETVLRHATQSLLTCHEVATHANHDLKELFHLSFSYELEEEIDSSVTKNTNGIHICRDRGMSLTVESAFVEAKRLFNKICP 570
BLAST of mRNA_F-serratus_M_contig790.19187.1 vs. uniprot
Match: A0A1S3K212_LINUN (rab proteins geranylgeranyltransferase component A 2 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3K212_LINUN) HSP 1 Score: 193 bits (490), Expect = 2.390e-48 Identity = 224/825 (27.15%), Postives = 343/825 (41.58%), Query Frame = 1
Query: 25 DEDFLEEYFDVVILSTGLGSSILAAALAKSGKRVLHLDRNDHYGDRIASFSFLQLLDWVERHRESSDEGRSTEPSSEPDFDLERAGKAIARA--HAREEMDKKEKMKKNRAANSAGEKGNGERVVETCAKDATEETADKSISPAADPAVYDGGKQEVGEAAQTCTEQEHDGVNVDKTVEEDADKRFR-SFELRLLPLSHHGCQTRAGAPSNACTQERL------QQKSSEDAAAAAAFGRPVRPTAPSHPAWIGRREPRKASEGGNVDGGRREV-ESLHPAFWS-----YRVGRRPDP------TELVRLSRSFNLDLTSQVFLATGAAVDAMVSSGVANYLEFKDMPAL--YMGSDDAPVPCSKADVFGTKLLTPLEKRRLMRFLLFASDWGLQRAGEDVSARNEAGLGRGRSLRRPQNREAASGDFDAVAHAGRPFSEFLESCGLPERVRAMVTYALALLPGGEGVGSGGDKGAEENATTTTEDGLEAVYRHLSALGRFGETAFISPIYGLGELPQAFCRMAAVYGAVYVLRRQLKGALIDGGTGR*CVGVVDESGRPLACGSLVIGEEYFIPPPLAKTASESRENPGSPDHLAPSLPSTPAEETPDPSGKPIAKSSRKDPYRRQRQRQRLLRRIVVASGPAVSPDGDGRGLCVLPPGLRCVGNTSAVHVVSLDESTAACPGGLDGACVLHLTTTVVLSGDAD---AETTXXXXXXXXXXXXXRAAKELLAAAGVEEIWSVGFSWSIGDQVALAEEDLPANVAICQRPRQELYLHEVFVQAERAFSRLCPGEPFWPPPPN-----------ASNGEDEYQAEM 2388
D+D EY D ++L TGL ++AAALA+ G RVLHLDRND+Y A F+F + W+++ + + E + SSE +L G+ + H + EK+ A +VE ++T+ S++ A P + + +T E D NVD ++ D+DKRF S + H Q++ ++E+ Q+K+ E++ A V S + EP N D V ES H A + + ++PD +EL + R FNLDL ++ + G+ V+ ++SS +A Y EFK + + ++ VPCS+ADVFG+K +T +EKR LM+FL F ++ ++ ED E +P++EFL+S L V+ + A+A+ DK T T +GL R L ++GR+G T F+ P+YG GELPQ FCRM AV+G Y+LRR + ALI G + CVG++D G + C + VI E L S +R KSSR I + + D D L LPP G T + V+ L +T ACP GL V+HLT S + D AE +L + + ++ + G + E P NV + P L ++A + F ++CPGE F P PN A+NG+ ++A++
Sbjct: 3 DDDLPREY-DAIVLGTGLTECVIAAALARIGFRVLHLDRNDYYSSEWAVFNFDGMQRWIKQEQTRALE-KEAPFSSELYQELLEDGEVLIPLPQHGTGTSNVVEKVFMKEAPAD---------IVEV-----EDKTSKLSLASEAAPNIT---------SQETTESSEIDSQNVDNLLQ-DSDKRFEESVVSETVSQGDHSTQSQGKDQPLTESEEQSENAKIGQEKNEENSVDVAESTGKVEEQQKSD-----KTEP-------NYDNVEFVVQESDHKAQGAGVKVAEKEPKKPDKVREWTLSELKKEWRRFNLDLAPKMLYSRGSLVELLISSDIAKYCEFKTVTRILTHLNGKVEQVPCSRADVFGSKAVTMVEKRMLMKFLTFCMEY--EKHAEDYQEYQE-----------------------------KPYTEFLKSKKLSATVQHYICQAIAMST---------DK-------TNTIEGLRRTKRFLQSIGRYGNTPFLWPLYGSGELPQCFCRMCAVFGGTYILRRTAR-ALIMGKDNK-CVGIIDTEGLRMKC-NWVIMEGGLASEALLPENSRNR------------------------------KSSRG---------------IYITDKSLCTDDQDQITLMHLPPAN---GQTDPITVMELSPATYACPKGLH---VVHLTCQGCNSAEEDLKPAEDLLFKPVEQVEPEPTDTRPRVLWSLHLNQMDNTGCDLN---------EKTPENVVLVAGPGASLDFEHSILEARQVFEKICPGEEFLPKAPNPEDIIFDDGQEAANGDSGFEADV 679
BLAST of mRNA_F-serratus_M_contig790.19187.1 vs. uniprot
Match: A0A0W8C4L4_PHYNI (Rab escort protein 1 n=20 Tax=Phytophthora TaxID=4783 RepID=A0A0W8C4L4_PHYNI) HSP 1 Score: 187 bits (476), Expect = 9.480e-47 Identity = 167/541 (30.87%), Postives = 241/541 (44.55%), Query Frame = 1
Query: 877 ELVRLSRSFNLDLTSQVFLATGAAVDAMVSSGVANYLEFKDMPALYMG---SDDAP-------VPCSKADVFGTKLLTPLEKRRLMRFLLFASDWGLQRA-GEDVSARNEAGLGRGRSLRRPQNREA-ASGDFDAVAHAGRPFSEFLES-CGLPERVRAMVTYA--LALLPGGEGVGSGGDKGAEENATTTTEDGLEAVYRHLSALGRFGETAFISPIYGLGELPQAFCRMAAVYGAVYVLRRQLKGALIDGGTGR*CVGVVDESGRPLACGSLVIGEEYFIPPPLAKTASESRENPGSPDHLAPSLPSTPAEETPDPSGKPIAKSSRKDPYRRQRQRQRLLRRIVVASGPAVSPDGDGRGLCVLPPGLRCVGNTSAVHVVSLDESTAACPGGLDGACV-LHLTTTVVLSGDADAET--TXXXXXXXXXXXXXRAAKELLAAAGVE-----EIWSVGFSW---------SIGD-QVALAEEDLPANVAICQRPRQEL-----------YLHEVFVQAERAFSRLCPGEPFWPPPPNASNGE 2367
ELV+ S SF++D+ ++ L++ V+ +++SGV YLEF + Y+ +D++ VPCSK DVF +KLL +EKR+LM+FL F +D+G EDV +NE L GR+L+RPQN+ + A D + VA+ PF E LE L +++ +V Y LA P A +N + DGL AVYR+++++GRF TAF++P+YG+ EL Q+FCR++AVYG +YVLR + G ++D T R GV G L +V Y L + +R LLR + V DG R + V+PP N A+ VV LD ACP G + + L T + AE + RA + A VE + WS +W + GD V+ +DLP+NV +C+ EL +L A F LCPGEPF P +A E
Sbjct: 120 ELVQKSSSFSIDVNPRLMLSSEQLVETLITSGVGRYLEFAAIERTYVHFQPTDNSTEPDTVWEVPCSKKDVFQSKLLGMVEKRQLMKFLQFVADYGETHILHEDVKTKNERSLALGRALKRPQNKASQADTDAELVAYLDNPFQELLEKHFKLSVKLQQVVVYCVGLATFP------------ASKNQISA-RDGLAAVYRYVASIGRFTGTAFLAPLYGISELAQSFCRLSAVYGGIYVLRAPINGFVLDNET-RTLTGVRCSDGDVLRTKHVVTNGSYVDCLRLNNVS--------------------------------------------KRAHGELLRGVFVLKSSL--RDGMNRIMLVIPPEDSEFNNPFAIQVVQLDVGAYACPKGYFLVQISMPLPTDWFEDKEKQAELMKSVIRRLILSSEAEKRAKNKAKEAENVENDATEQNWSDRIAWRAIFTMDHLASGDINVSAKAKDLPSNVWVCETVTGELQQNKGVCPLEIHLESASANARAIFEALCPGEPFLPKSASAEQAE 600
BLAST of mRNA_F-serratus_M_contig790.19187.1 vs. uniprot
Match: A0A812RG97_SYMMI (CHML protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RG97_SYMMI) HSP 1 Score: 187 bits (475), Expect = 1.040e-46 Identity = 164/553 (29.66%), Postives = 248/553 (44.85%), Query Frame = 1
Query: 874 TELVRLSRSFNLDLTSQVFLATGAAVDAMVSSGVANYLEFKDMPALYM---GSDDAP----VPCSKADVFGTKLLTPLEKRRLMRFLLFASDWGLQRAGEDVSARNEAGLGRGRSLRRPQNREAASGDF--DAVAHAGRPFSEFLESCGLPERVRAMVTYALALLPGGEGVGSGGDKGAEENATTTTEDGLEAVYRHLSALGRFGETAFISPIYGLGELPQAFCRMAAVYGAVYVLRRQLKGALIDGGT-------------------------GR*CVGVVDESGR-----------------PLACGSLVIGEEYFIPPPLAKTASESRENPGSPDHLAPSLPSTPAEETPDPSGKPIAKSSRKDPYRRQRQRQRLLRRIVVASGPAVS----PDGDGRGLCVLPPGLRCVGNTSAVHVVSLDESTAACPGGLDGACVLHLTTTVVLSGDADAETTXXXXXXXXXXXXXRAAKELLAAAGVEEIWSVGF-------------SWSIGDQVALAEEDLPANVAICQRPRQEL-YLHEVFVQAERAFSRLCPG 2325
+ +V+ +RSFN+D ++ L+ G VD +V+SGV +YLEFK + +L+ G D + VP SKAD+F +K+ + LEKR LM+ + A D G Q+ G V NE L +GR+L RPQN+ A SG + A++ + F FL+ + + + VT+ L+L P +A T+ L ++YRH++A GRFG T+F+ PIYG E QAFCR++AV+G V+VLR + + T G G VD++G L CG V + + + A A+ RE + P+ + T G K D R QR + V + PA + P +G+ ++PPG + N+ A++VV LD ST P G+ +L++ T + SGD + ++ ++ +A +EI F +WS A P NV C R+ L YLHE VQAE F +CPG
Sbjct: 54 SRMVQHNRSFNIDSMPKLLLSAGKMVDLIVASGVGHYLEFKSVDSLFYIMSGKDGSQQTHRVPSSKADIFNSKMFSALEKRMLMKLMQSAVDLGRQQEGLPVETLNETELAQGRALFRPQNKFANSGMLTGNMDANSDKLFRVFLKDSSVHDSLVPFVTHGLSLEP---------------SAECTSARALASLYRHINASGRFGSTSFLMPIYGTSEFTQAFCRLSAVWGGVFVLRESVDRVFVTQETSESGCNVCDNSEVSTMPISPPHEVCGDFATGTVDDAGEICNKATALSHDSYVRAVRLNCGKTVACD-FIVCDNGAPEAARWREL------VVPTSTHSGGNTT---EGAGNDKRCVPDKMWRLVQRHVFANKSVFPTQPATASESGPIESSKGVMIIPPGTAHLANSHAIYVVQLDSSTMVSPVGV---FLLYIMTYIDPSGDEEVDSAKAATLMQDVASLLQSLTCHGSAVVFDEIMFATFLHPPVPRLETSNAAWS-----AATRRLYPRNVIPCDSTREHLLYLHEAAVQAESIFHSICPG 573
BLAST of mRNA_F-serratus_M_contig790.19187.1 vs. uniprot
Match: UPI00032B12F8 (rab proteins geranylgeranyltransferase component A 2 n=4 Tax=Ochotona TaxID=9977 RepID=UPI00032B12F8) HSP 1 Score: 187 bits (475), Expect = 1.140e-46 Identity = 202/787 (25.67%), Postives = 312/787 (39.64%), Query Frame = 1
Query: 31 DFLEEYFDVVILSTGLGSSILAAALAKSGKRVLHLDRNDHYGDRIASFSFLQLLDWVERHRESSDEGRSTEPSSEPDFDLERAGKAIARAHAREEMDKKEKMKKNRAANSAGEKGNGERVVETCAKDATEETADKSISPAADPAVYDGGKQEVGEAAQTCTEQEHDGVNVDKTVEEDADKRFRSFELRLLPLSHHGCQTRAGAPSNACTQERLQQKSSEDAAAAAAFGRPVRPTAP--SHPAWIGRREPRKASEGGNV-------DGGRREVESLHPAFWSYRVGRRPDPTELVRLSRSFNLDLTSQVFLATGAAVDAMVSSGVANYLEFKDMPAL--YMGSDDAPVPCSKADVFGTKLLTPLEKRRLMRFLLFASDWGLQRAGEDVSARNEAGLGRGRSLRRPQNREAASGDFDAVAHAGRPFSEFLESCGLPERVRAMVTYALALLPGGEGVGSGGDKGAEENATTTTEDGLEAVYRHLSALGRFGETAFISPIYGLGELPQAFCRMAAVYGAVYVLRRQLKGALIDGGTGR*CVGVVDESGRPLACGSLVIGEEYFIPPPLAKTASESRENPGSPDHLAPSLPSTPAEETPDPSGKPIAKSSRKDPYRRQRQRQRLLRRIVVASGPAVSPDGDGR-GLCVLPPGLRCVGNTSAVHVVSLDESTAACPGGLDGACVLHLTTTVVLSGDADAETTXXXXXXXXXXXXXRAAKELLAAAGVEEIWSVGFSWSIGDQVALA-EEDLPANVAICQRPRQELYLHEVFVQAERAFSRLCPGEPFWPPPPN 2352
D L FDVVI+ TGL SILAAA A+SG+RVLH+D +YG ASFSF LL W+E ++ SSD + + + H EE + C KD KSI + + HD V+ TVEE LR P S S+A +++L S D A F + + + SH A K G+ G + E S+ + + R ++LV+ R FN+DL S++ + G+ +D ++ S V+ Y EFK++ + + VPCS+ADVF +K LT +EKR LM+FL F D+ + P + DF + FSE+L++ L ++ + +++A+ ++ TT DGL A L LGRFG T F+ P+YG GE+PQ FCRM AV+G +Y LR +++ ++D +GR C ++D G+ ++ ++G+ Y +K Q +++ R +++ + D D + ++PP T +V V L ST C + G ++HLT + + D E KE L + +W++ F+ ++ + LP NV +C P +L QAE F + P E F PPPPN
Sbjct: 3 DRLPTEFDVVIIGTGLPESILAAACARSGQRVLHVDSRSYYGGNWASFSFPGLLSWLEEYQPSSDLDEGSTATWQDSI------------HETEE------------------------AIPLCKKD-------KSI-----------------QHTEVFCYASHD---VEDTVEEIG-------ALRKNPSSVGSAALTEPLDSSALPEQKL----SSDDAGYEMFAQHTQNSEAVISHKATDIEESLEKERCCGDTTCTHTVSSGDKDENNSIEDSS-NQRKRNAITYSQLVKEGRRFNIDLVSKLLYSQGSLIDLLIKSNVSRYAEFKNVTRILAFREGKVEQVPCSRADVFNSKELTMVEKRMLMKFLTFCLDYE----------------------QHPDEYQ----DFKQCS-----FSEYLKTKKLTPNLQHFILHSIAMT---------------SESSCTTLDGLRATKNFLQCLGRFGNTPFLFPVYGQGEIPQCFCRMCAVFGGIYCLRHRVQCLVVDKESGR-CKAIIDHFGQRISAKYFIMGDHYLSEETCSKV-----------------------------------------------QYKQISRAVLITDKSLLKTDSDQEISILIVPP---VEAGTCSVRVTELCSSTMTC---MKGTHLVHLTCSSSKTAREDLEPVTQKLFIPYSAS--EGEKEGLTKPRL--LWALYFNMRDSSGISRSCYTGLPPNVYVCSGPDCDLGNEHAVKQAETLFREILPSEEFCPPPPN 610
BLAST of mRNA_F-serratus_M_contig790.19187.1 vs. uniprot
Match: A0A8C5DXP8_9TELE (Rab proteins geranylgeranyltransferase component A n=1 Tax=Gouania willdenowi TaxID=441366 RepID=A0A8C5DXP8_9TELE) HSP 1 Score: 186 bits (472), Expect = 2.050e-46 Identity = 190/779 (24.39%), Postives = 296/779 (38.00%), Query Frame = 1
Query: 28 EDFLEEYFDVVILSTGLGSSILAAALAKSGKRVLHLDRNDHYGDRIASFSFLQLLDWVERHRESSDEGRSTEPSSEPDF-DLERAGKAIARAHAREEMDKKEKMKKNRAANSAGEKGNGERVVETCAKDATEETADKSISPAADPAVYDGGKQEVGEAAQTCTEQEHDGVNVDKTVEEDADKRFRSFELRLLPLSHHGCQTRAGAPSNACTQERLQQKSSEDAAAAAAFGRPVRPTAPSHPAWIGRREPRKASEGGNVDGGRREVESLHPAFWSYRVGRRPDPTELVRLSRSFNLDLTSQVFLATGAAVDAMVSSGVANYLEFKDMPAL--YMGSDDAPVPCSKADVFGTKLLTPLEKRRLMRFLLFASDWGLQRAGEDVSARNEAGLGRGRSLRRPQNREAASGDFDAVAHAGRPFSEFLESCGLPERVRAMVTYALALLPGGEGVGSGGDKGAEENATTTTEDGLEAVYRHLSALGRFGETAFISPIYGLGELPQAFCRMAAVYGAVYVLRRQLKGALIDGGTGR*CVGVVDESGRPLACGSLVIGEEYFIPPPLAKTASESRENPGSPDHLAPSLPSTPAEETPDPSGKPIAKSSRKDPYRRQRQRQRLLRRIVVASGPAVSPDGDGR-GLCVLPPGLRCVGNTSAVHVVSLDESTAACPGGLDGACVLHLTTTVVLSGDADAETTXXXXXXXXXXXXXRAAKELLAAAGVEEIWSVGFSWSIGDQVALAEEDLPANVAICQRPRQELYLHEVFVQAERAFSRLCPGEPFWPPPPN 2352
ED E FDVVIL TGL S++AAA ++ G+RVLHLDR +Y ASF+F LL W+++ ++ T+P D+ DL G+ + + ++ + +N + K E VE + D+ T ++ PA+ Q+ D + E+ ++ A G P PA + EP + ++ +L + R FN+DL S++ + G+ V+ ++ S V+ Y EFK + + Y + VPC++ADVF ++ L+ +EKR+LMRFL + +D SA N GRP+ EFL L E ++ + Y++A++ T TE GL + L LGR+G T F+ P+YGLGE+PQ FCRM AV+G +Y LR L+ L+D T R C V+D G+ ++C +++ E Y R+N +P L R +++ D + + +PP AV +V L ST C + G ++HL + V S D + E +W + F+ G + + DLP+NV +C P EL QAE F ++ P E F PP PN
Sbjct: 4 EDLPSE-FDVVILGTGLVESVVAAACSRVGQRVLHLDRRSYYAANWASFTFNGLLSWIQQQQDD------TQPEETQDWCDLLEEGEELIQLSSQSSI-------RNLQVFTYTSK---EDEVEEASADSVNTTEEEQHGPAS---------------------QDDDSNQENLENHENQEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATITEGAEPEAEQPQSPAIPSQSEPSR---------------------------KKISFAQLEKEGRRFNIDLVSKLMYSRGSLVELLIKSNVSRYAEFKKVSRILTYRNGEVEQVPCTRADVFASRQLSVVEKRKLMRFLTSCIE-----EKDDQSAYN-----------------------------GRPYLEFLRDQKLGENLQHFLLYSIAMV----------------TEDTPTEVGLASTRNFLRCLGRYGNTPFLFPLYGLGEIPQCFCRMCAVFGGIYCLRHSLRCLLLDTATNR-CKAVIDSRGQRISCSHVLLEENYV----------HERKNVATPPRF-------------------------------------LSRAVLITDSSLHGSDSEQEVSMVTIPPITE---GAPAVKMVELSSSTMTC---MSGTYLVHLNCSSVSSAYQDLSPLITTMF---------STPESHDQGRPSVLWCLYFNMEDGSAMEVEGHDLPSNVYVCSGPDGELGHEHAITQAELIFHKILPEEDFCPPAPN 604 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig790.19187.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig790.19187.1 >prot_F-serratus_M_contig790.19187.1 ID=prot_F-serratus_M_contig790.19187.1|Name=mRNA_F-serratus_M_contig790.19187.1|organism=Fucus serratus male|type=polypeptide|length=534bp MAGVAGSEDEDFLEEYFDVVILSTGLGSSILAAALAKSGKRVLHLDRNDHback to top mRNA from alignment at F-serratus_M_contig790:168195..176682- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig790.19187.1 ID=mRNA_F-serratus_M_contig790.19187.1|Name=mRNA_F-serratus_M_contig790.19187.1|organism=Fucus serratus male|type=mRNA|length=8488bp|location=Sequence derived from alignment at F-serratus_M_contig790:168195..176682- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig790:168195..176682- >mRNA_F-serratus_M_contig790.19187.1 ID=mRNA_F-serratus_M_contig790.19187.1|Name=mRNA_F-serratus_M_contig790.19187.1|organism=Fucus serratus male|type=CDS|length=3204bp|location=Sequence derived from alignment at F-serratus_M_contig790:168195..176682- (Fucus serratus male)back to top |