mRNA_F-serratus_M_contig79.19173.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig79.19173.1 vs. uniprot
Match: D7FUL4_ECTSI (YHYH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUL4_ECTSI) HSP 1 Score: 379 bits (972), Expect = 2.010e-116 Identity = 190/336 (56.55%), Postives = 224/336 (66.67%), Query Frame = 1
Query: 82 ILVLGPRQVPGQRSGGGSGGNG------------------RSSDTSEEVLCAENGTSAHYEEFLSGSGTTTARWAGSITGCPNHVNWAINPNDALHNPTNVSIPAYPMLLGADGTRNLSSEPNAIGIMRNGVSLFSPWAVSTVTRFENTAFSLESSTFDMCGGHATALGIYHYHSTPGCLQEQAMERTGHNASQHSPLLGWSYDGFPVYGQLGPGGVEMKMCGEDGADETHCLDMCNGYETELPVIDGFEYRYYLSCGFDESYFPLTVNCYRGCCPDGMTCSTKVEPCDEDAVQGYTADYAPVSYPSLAIAFDADLIEGNDTLTIGNEDGFDCALY 1035
+L+L R G R+ G GG+G SD S E CA NG+ AHY+EFL+G G T RW G+ TGCPNHVNW INPN L N SIPAYPMLL GT +LSS IG+MRNGVS++S WA+ V +E+TAF LE+ T D CGGHAT G YHYHST GCLQEQA G A +HSPLLGWSYDGFP+YGQLGPGGVEMKMCG DGAD T CLD+C+GYE + D F YRYY SCGFDES+FP T+NCYRGCCP G+TCS ++E C + A+ GYT D+ PV+ SL +DA LI G+D IG + +C LY
Sbjct: 22 LLLLLTRLPQGSRAQPGGGGSGDXXXXXXXXXXXXXXXXXEGSDASVE--CAYNGSDAHYDEFLAGEGLTMVRWTGTNTGCPNHVNWPINPNPGLVIAINESIPAYPMLLEDGGTTDLSSAAGTIGLMRNGVSMYSAWALDAVEEYEDTAFYLEADTLDPCGGHATPTGSYHYHSTAGCLQEQA----GAVAGEHSPLLGWSYDGFPIYGQLGPGGVEMKMCGADGADSTVCLDLCSGYEASIDE-DTFTYRYYTSCGFDESFFPFTLNCYRGCCPTGVTCSDRIEACGDGALIGYTGDHVPVASESLHEPYDALLISGDDEDIIGTDLTVNCTLY 350
BLAST of mRNA_F-serratus_M_contig79.19173.1 vs. uniprot
Match: A0A6H5KP42_9PHAE (YHYH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KP42_9PHAE) HSP 1 Score: 375 bits (963), Expect = 9.190e-116 Identity = 175/292 (59.93%), Postives = 209/292 (71.58%), Query Frame = 1
Query: 160 TSEEVLCAENGTSAHYEEFLSGSGTTTARWAGSITGCPNHVNWAINPNDALHNPTNVSIPAYPMLLGADGTRNLSSEPNAIGIMRNGVSLFSPWAVSTVTRFENTAFSLESSTFDMCGGHATALGIYHYHSTPGCLQEQAMERTGHNASQHSPLLGWSYDGFPVYGQLGPGGVEMKMCGEDGADETHCLDMCNGYETELPVIDGFEYRYYLSCGFDESYFPLTVNCYRGCCPDGMTCSTKVEPCDEDAVQGYTADYAPVSYPSLAIAFDADLIEGNDTLTIGNEDGFDCALY 1035
+S V CA +GT AHYEEFL+G G T ARW + TGCPNH+NW +NPN A N S+PAYPML+ + GT +LSS IG+MRNGVS+FS WAV V +E+TAF LE+ TFD CGGHAT G YHYH T GCLQEQA G +HSP+LGWSYDGFP+YGQLGPGGVEMKMCG DGA +T CLD+C+GYE + D F YRYY SCGFDES+FP T+NC+RGCCP G TCS ++E C DA GYT DY PV+ SL +DA+L+ G+D IG+ +C LY
Sbjct: 49 SSATVECATDGTDAHYEEFLAGEGITMARWTATETGCPNHINWPLNPNAAGVMSVNQSVPAYPMLIASGGTTDLSSAAGTIGLMRNGVSMFSAWAVDAVVEYEDTAFYLEADTFDPCGGHATPTGAYHYHGTAGCLQEQA----GAVKGEHSPVLGWSYDGFPIYGQLGPGGVEMKMCGADGAHDTACLDLCSGYEATIDE-DEFTYRYYTSCGFDESFFPFTLNCFRGCCPTGNTCSDRLEACGVDADVGYTDDYVPVALESLDEFYDAELVLGDDLELIGSRTTVNCTLY 335
BLAST of mRNA_F-serratus_M_contig79.19173.1 vs. uniprot
Match: D8LCJ6_ECTSI (YHYH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCJ6_ECTSI) HSP 1 Score: 170 bits (430), Expect = 5.250e-44 Identity = 94/221 (42.53%), Postives = 120/221 (54.30%), Query Frame = 1
Query: 406 IMRNGVSLFSPWAVS-TVTRFENTAFSLESSTFDMCGGHATALGIYHYHSTPGCLQEQAMERTGHNASQHSPLLGWSYDGFPVYGQLGPGGVEMKMCGEDGADETHCLDMCNGYETELPVIDGFEYRYYLSCGFDESYFPLTVNCYRGCCPDGMTCSTKVEPCDED--AVQGYTADY-APVSYPSLAIA---FDADLIEGNDTLTIGNEDGFDCALYAANA 1047
+M NGV+++S +A T + A L T D+CGG TA G+YHYH+ PGCLQEQAM+ A HSPLLGW+YDGFP+YGQLGP GVEM L+CG YFP T+NCYRGCC + C + V+ C E+ AV GYT D+ A SY SL + D+DLIEG+D + +D DC+ Y +A
Sbjct: 1 MMINGVAVYSSYADDRAATTYGAAAAKLHGDTTDLCGGSTTADGVYHYHNAPGCLQEQAMKAQNLTADDHSPLLGWAYDGFPIYGQLGPSGVEM-----------------------------------LTCGSGPEYFPFTINCYRGCCEETTRCHSTVQNCIEELGAVIGYTDDFTAGQSYESLYLDTPYMDSDLIEGDDVDQVATQDEMDCSFYMGSA 186
BLAST of mRNA_F-serratus_M_contig79.19173.1 vs. uniprot
Match: A0A8J2X2K6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X2K6_9STRA) HSP 1 Score: 159 bits (402), Expect = 5.170e-37 Identity = 117/367 (31.88%), Postives = 163/367 (44.41%), Query Frame = 1
Query: 151 SSDTSEEVLCAENGTSAHYEEFLSGSGTTTARWAGSITGCPNHVNWAINP----------------NDALHNPTNVSIPAYPMLLGADG---------------------TRNLSSEPNAIGIMRNGVSLFSPWAVST---------VTRFENTAFSLESSTFDMCGGHATALGIYHYHSTPGCLQEQAMERTGHNASQHSPLLGWSYDGFPVYGQLGPGGVEMKMCGEDGADETHCLDMCNGYETELPVIDGFEYRYYLSCGFDES--------------YFPLTVNCYRGCCPDGMTCSTKVEPCDEDAVQGYTADYAPVSYPSLAIAFDADLIEGNDTLTIGNEDGFDCALYAANATLGATPAP 1071
SSD S + CA +G+SA Y E +S + T R S GCPNH ++ +A NV +PA P LL AD T +L E I NGV +S AV + +++TA E +FD C GH++ G YHYH P CL QA + HS +GW+ DGFP+YG LGPGGVE++ CG GA T+C D C GYE ELP +D ++YRYY++ ++ YFP T+ C+RG +T S+ + + G+T+D+ ++P ++G D +D A TL TPAP
Sbjct: 23 SSDDSGDA-CAADGSSATYAETISTAQGVTKRTIVSA-GCPNHESYCTGKPANKPTCDEEGLKGSGTEATDQDLNVDVPANPKLLDADDWAAVLADAATVPAAGATETATTSSLDCEMGGIAYALNGVVFYSG-AVGNKNLDPPCPQLDIYDDTA---EWISFDCCSGHSSGTGGYHYHFPPSCLIAQA-NADAPISDGHSSQIGWAQDGFPIYGPLGPGGVEIRNCGASGAHATYCQDKCGGYEGELPDVDNYKYRYYITGKVNDLNSLPSYPKPDDLDLYFPFTIRCHRG-----VTLSSASDFKNYAGSDGFTSDHTATAHPGYTTPLPVQCLDGKGL------DDYDVFASAPAPTLRPTPAP 371
BLAST of mRNA_F-serratus_M_contig79.19173.1 vs. uniprot
Match: A0A8J2WVX8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WVX8_9STRA) HSP 1 Score: 154 bits (388), Expect = 1.080e-36 Identity = 99/295 (33.56%), Postives = 140/295 (47.46%), Query Frame = 1
Query: 178 CAENGTSAHYEEFLSGSGTTTARWAGSITGCPNHVNWAIN-PNDAL-------------HNPTNVSIPAYPMLLGADGTRNLSSEPNAIGIMRNGVSLFSPWAVSTVT-----RFENTAFSLESSTFDMCGGHATALGIYHYHSTPGCL--QEQAMERTGHN-ASQHSPLLGWSYDGFPVYGQLGPGGVEMKMCGEDGADETHCLDMCNGYETELPVIDGFEYRYYLSCGFDES--------------YFPLTVNCYRGCCPDGMTCSTKVEPCDEDAVQGYTADYAPVSYPSLA 954
CA +G+SA Y E ++ + R S TGCPNH ++ P ++ +V +PA P L + L I NGV +S AV+ V+ + + + E +FD C GH+T G YHYH P CL Q A G A+ HSP +GW+ DGFP+YG LGPGGVE++ CG GAD T+C D C GYE EL +D ++YRYY++ + YFP T+ C+RG +T E GYT+ + ++P +
Sbjct: 39 CAADGSSASYTETITTQSGVSVRKIVS-TGCPNHESYCTGKPGNSCGDEGKQTTLVEGKEQSLSVEVPANPKLKSSYTAEELDCSMGTIAYALNGVGFYSG-AVAFVSGGPCPQLDVADATAEWISFDCCSGHSTGSGGYHYHFPPSCLLAQADADAPVGTTVANGHSPQIGWAQDGFPIYGPLGPGGVEIRNCGASGADSTYCQDACGGYEGELDGVDNYKYRYYVTGKVGDLNALPSNPKPDSEALYFPYTIRCHRG--------ATVSEYNSVSGSNGYTSAHTATAHPGYS 323
BLAST of mRNA_F-serratus_M_contig79.19173.1 vs. uniprot
Match: A0A7S3ZWN8_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZWN8_9STRA) HSP 1 Score: 151 bits (381), Expect = 8.940e-36 Identity = 94/279 (33.69%), Postives = 127/279 (45.52%), Query Frame = 1
Query: 178 CAENGTSAHYEEFLSGSGTTTARWAGSITGCPNHVNWAINP----------------NDALHNPTNVSIPAYPMLLGAD---------------------GTRNLSSEPNAIGIMRNGVSLFSPWAVSTVTRFENTAFSLESST-----FDMCGGHATALGIYHYHSTPGCLQEQAMERTGHNASQHSPLLGWSYDGFPVYGQLGPGGVEMKMCGEDGADETHCLDMCNGYETELPVIDGFEYRYYLSCGFDES--------------YFPLTVNCYRG 846
CAE+G+SA Y E +S + R S GCPNH ++ +A NV +PA P LL AD T +L E I NGV +S ++ +++ T FD C GH++ G YHYH P CL QA + A HS +GW+ DGFP+YG LGPGGVE++ CG GA T+C D C GYE ELP +D ++YRYY++ ++ YFP T+ C+RG
Sbjct: 62 CAEDGSSAAYTETISTAQGVKKRTIVSA-GCPNHESYCTGKPANKDVCDEEGLKGDGTEATDQDLNVDVPANPKLLDADDWAAVLADAATVPAATATETASTSSLDCEMGGIAYALNGVVFYSGAVDNSQADPPCPQLAIDDPTAEWISFDCCSGHSSGTGGYHYHFPPSCLIAQA-NKEAPIAGGHSAQIGWAQDGFPIYGPLGPGGVEIRNCGASGAHATYCQDKCGGYEGELPDVDNYKYRYYITGKVNDLNSLPSYPKPDNVDLYFPFTIRCHRG 338
BLAST of mRNA_F-serratus_M_contig79.19173.1 vs. uniprot
Match: A0A7S3JW52_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JW52_9STRA) HSP 1 Score: 155 bits (391), Expect = 1.630e-35 Identity = 101/310 (32.58%), Postives = 149/310 (48.06%), Query Frame = 1
Query: 157 DTSEEVLCAENGTSAHYEEFLSGSGTTTARWAGSITGCPNHVNWAINPNDALHNPTNVSIPAYPMLLGADGTRN---LSSEPNAIGIMRNGVSLFSPWA--------VSTVTRFENTAFSLESSTFDMCGGHA--TALGIYHYHSTPGCLQEQAMERTGHNASQHSPLLGWSYDGFPVYGQLGPGGVEMKMCGEDGADETHCLDMCNGYETELPVI-DGFEYRYYL--------SCGFD-----------------ESYFPLTVNCYRGCCPDGMTCSTKVEPCDEDAVQGYTADYAPVSY-PSLAIAFD 966
D+ ++ CA++G+S + E + G TT R S CPNH +NPN A + IP P + + + L+ E AIGI+ +G ++SP+ S + N+A E +FDMC HA + YH H P CL +Q G ++HSP +G+ +DGFPVYG GP G+ MK C E AD +C+D C G+ + +I DG+ YRYY+ SC +D +Y+P T C RGCCP G+ C ++ C ++ G D ++ PS+ A D
Sbjct: 44 DSVQDNACAKDGSSYTWFEEIDG---TTRRI--STNHCPNHNYIDLNPNTAYPEESTYDIPLEPKFISSTNINDYLLLNEEGGAIGILYDGSMIYSPYGGRLYGALNFSLDNDYYNSAPYAEGYSFDMCNQHAALSTAASYHSHVPPSCLLDQL----GQTDNEHSPQIGFLFDGFPVYGPRGPNGIMMKSCTESTADSVYCVDKCGGFADDGSIINDGYVYRYYIMGTYKVQASCTWDLWANLDGEATNCDYQQASTYYPFTPLCMRGCCPSGVDCWDELPACS--SISGTIVDGTTNNFNPSITQALD 342
BLAST of mRNA_F-serratus_M_contig79.19173.1 vs. uniprot
Match: R1DZX8_EMIHU (EF-hand domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DZX8_EMIHU) HSP 1 Score: 158 bits (400), Expect = 1.850e-35 Identity = 104/302 (34.44%), Postives = 137/302 (45.36%), Query Frame = 1
Query: 169 EVLCAENGTSAHYEEFLSGSGTTTARWAGSITGCPNHVNWAINPNDALHNPTNVSIPAYPMLLGAD------GTRNLSSEPNAIGIMRNGVSLFSPWAVS------------TVTRFENTAFSLESSTFDMCGGHATALGI---YHYHSTPGCLQEQAMERTGHNASQHSPLLGWSYDGFPVYGQLGPGGVEMKMCGEDGADETHCLDMCNGYETELPVIDGFEYRYYLSCG-----------------FDESYFPLTVNCYRGCCPDGMTCSTKVEPCDEDAVQGYTADYAPVSYPSLAIA 960
E CA +G+ A YEE GS +H N A VSIPAYP GA +LS + +G+ NGV++++ WA S V + A + E TFD CGGH++ YHYH P CL Q + G QHSP +GW YDGFPVYG GP GV+M CG+ GA E +CLD CNGY ++ ID F+YRYY+S + S+FP T C GC P G +++ +G A + PV S ++A
Sbjct: 371 EAACAYDGSDAWYEESFGGS--------------VHHTNSA--------GAKAVSIPAYPFFNGASYEDALAAATDLSEQGGDVGLTLNGVAIYTAWAGSYDXXXXXXIDEDDVMSETSNAVTAEGETFDRCGGHSSGSSAGFQYHYHIPPTCLLAQLGQYIG----QHSPQVGWMYDGFPVYGPFGPDGVQMIKCGQTGAHEVYCLDACNGYYSDDESIDVFKYRYYMSGNTTDQASLRASPLPTSDPVESSFFPFTPLCSLGCKPSGA---------NQNNWEGGVASWLPVCDTSASVA 637
BLAST of mRNA_F-serratus_M_contig79.19173.1 vs. uniprot
Match: R1DKM5_EMIHU (YHYH domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DKM5_EMIHU) HSP 1 Score: 146 bits (369), Expect = 1.160e-34 Identity = 94/257 (36.58%), Postives = 122/257 (47.47%), Query Frame = 1
Query: 178 CAENGTSAHYEEFLSGSGTTTARWAGSITGCPNHVNWAINPNDA---------------LHNPTNVSIPAYPMLLGADGTRNLSSEPNAIGIMRNGVSLFSPWAVS-TVTRFENTAFSLESSTFDMCGGHATAL-----GIYHYHSTPGCLQEQAMERTGHNASQHSPLLGWSYDGFPVYGQLGPGGVEMKMCGEDGADETHCLDMCNGYETELPVIDGFEYRYYLSCGFDE------------SYFPLTVNCYRGC 849
C G SA Y E + SGT R S GCPNH N +DA L + IPAYP+L + E I + NGV ++S S + + E ++FD CGGHA L G YHYH P CL+ Q G+ HSP +GWS DGFP+YG+LGPGGV M+ + G T+CLD C+G+E E+P +D F YRYY + + S +P + CYRGC
Sbjct: 12 CDPCGASASYTETIDASGTHHKRTIVS-NGCPNHYNLCTGKSDAAGCGAIGVEGTATEALEIAYQIDIPAYPVL-ATENDAWPECEKETIAMALNGVPIYSGAVGSGDCDILDLDDANAEWTSFDFCGGHARCLAFECNGDYHYHFPPSCLETQI----GNLTDGHSPQIGWSLDGFPIYGRLGPGGVTMEHTAQ-GCTGTYCLDDCSGFEMEIPGLDEFTYRYYFNGPLSDLVSLPTDPKPSASDYPFAMKCYRGC 261
BLAST of mRNA_F-serratus_M_contig79.19173.1 vs. uniprot
Match: A0A8J2X5K3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X5K3_9STRA) HSP 1 Score: 151 bits (381), Expect = 2.200e-33 Identity = 89/258 (34.50%), Postives = 122/258 (47.29%), Query Frame = 1
Query: 178 CAENGTSAHYEEFLSGSGTTTARWAGSITGCPNHVNWAINP----------------NDALHNPTNVSIPAYPMLLGADGTRNLSSEPNAIGIMRNGVSLFSPW----AVSTVTRFENTAFSLESSTFDMCGGHATALGIYHYHSTPGCLQEQAMERTGHNASQHSPLLGWSYDGFPVYGQLGPGGVEMKMCGEDGADETHCLDMCNGYETELPVIDGFEYRYYLSCGF--------------DESYFPLTVNCYRGC 849
C E+G+SA Y E ++ R S TGCPNH ++ +A+ +V IPA P+L + L AI NG+ +S A + + E +FD C GH+ YHYH P CL QA + + HS +GW+ DGFP+YG LGPGGVE++ CG GA T+C D C GYE ELP +D ++YRYY++ +E Y+P T+ CYRGC
Sbjct: 24 CNEDGSSAAYTETITTQQGVEKRTITS-TGCPNHESYCTGKPGPAPTCDEEGLKGSGTEAVEQDLSVDIPANPILKSSYEPGELDCSMGAIAYALNGIGFYSGAVGYDADGNCPQLDVADPEAEWISFDCCTGHSDYDAAYHYHFPPSCLLAQA-NKAAPISDGHSAQVGWAEDGFPIYGPLGPGGVEIRNCGTSGAHSTYCQDECGGYEGELPGVDNYKYRYYITGKVGDLNTLPSTPMPDSEELYYPYTIRCYRGC 279 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig79.19173.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig79.19173.1 >prot_F-serratus_M_contig79.19173.1 ID=prot_F-serratus_M_contig79.19173.1|Name=mRNA_F-serratus_M_contig79.19173.1|organism=Fucus serratus male|type=polypeptide|length=408bp MRTTRRISMWLAFGILVLGPRQVPGQRSGGGSGGNGRSSDTSEEVLCAENback to top mRNA from alignment at F-serratus_M_contig79:799068..811343+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig79.19173.1 ID=mRNA_F-serratus_M_contig79.19173.1|Name=mRNA_F-serratus_M_contig79.19173.1|organism=Fucus serratus male|type=mRNA|length=12276bp|location=Sequence derived from alignment at F-serratus_M_contig79:799068..811343+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig79:799068..811343+ >mRNA_F-serratus_M_contig79.19173.1 ID=mRNA_F-serratus_M_contig79.19173.1|Name=mRNA_F-serratus_M_contig79.19173.1|organism=Fucus serratus male|type=CDS|length=2448bp|location=Sequence derived from alignment at F-serratus_M_contig79:799068..811343+ (Fucus serratus male)back to top |