mRNA_F-serratus_M_contig79.19169.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig79.19169.1 vs. uniprot
Match: A0A8K0P8C7_LADFU (Uncharacterized protein n=2 Tax=Odonata TaxID=6961 RepID=A0A8K0P8C7_LADFU) HSP 1 Score: 69.3 bits (168), Expect = 3.190e-8 Identity = 82/257 (31.91%), Postives = 104/257 (40.47%), Query Frame = 3
Query: 2634 LHLACFNGSVSRTRRELSLGVDVNALAPGEAGGASPLQLACSSGND---DVVRLLLAASADPNLRDRHGASALHYAAATGHEAAVARLLGAKGCAVDPVDACGRTPLHDACDGGSGGVPKSSLMRNASRSPSPPTLVRGDDDRCG--------RENRVNIARLLFKAGADVGARIVIPSGGGVPAGTVSGAGNNYETAQPTRGRGRAFFSRETG------AAEGMTPLHLACSAGRVELASYLIRNGACVSVKDKGG 3353
LH A G LS GVDV+ L + +PL LAC+ + VR LLAA ADP LR++ G +ALH AA G LL A GRTPLH A G V + L+ A P P D CG R V + +LL GA + R+ SG G + AQ R F G A GM+PLH A G+V L++ GA + +D+ G
Sbjct: 118 LHEAAQAGRPDVVLYLLSRGVDVDPL---KRADWTPLMLACTRSGPSTLETVRSLLAAGADPRLRNKDGWTALHVAAREGDPVVARCLLAAAPTLATATSRNGRTPLHTAALHARGAVVE--LLLAAGCPPDPL-------DSCGFTPLLEAVRSGDVALVQLLALRGASL-VRV-----------DASGRGGVHLAAQAGRLPMLTFLVARCGLPVDGCAGSGMSPLHCAAREGQVLAVKRLLKLGADATARDEQG 350
BLAST of mRNA_F-serratus_M_contig79.19169.1 vs. uniprot
Match: A0A1I7ZFJ0_9BILA (ANK_REP_REGION domain-containing protein n=1 Tax=Steinernema glaseri TaxID=37863 RepID=A0A1I7ZFJ0_9BILA) HSP 1 Score: 62.4 bits (150), Expect = 1.320e-6 Identity = 37/91 (40.66%), Postives = 51/91 (56.04%), Query Frame = 3
Query: 2694 VDVNALAPGEAGGASPLQLACSSGNDDVVRLLLAASADPNLRDRHGASALHYAAATGHEAAVARLLGAKGCAVDPVDACGRTPLHDACDGG 2966
V +N+L G L A S G++ +V++LL A A+ N+RDR GA+ LH AAA + + L KG +D D+ G TPLH AC G
Sbjct: 98 VCINSL---NGNGQCSLHYAASKGHESIVKMLLEAQAEVNVRDRFGATPLHRAAALNRRSIIRLLTATKGIRLDVKDSEGNTPLHLACQDG 185
BLAST of mRNA_F-serratus_M_contig79.19169.1 vs. uniprot
Match: A0A851CVN4_CALVR (ANR16 protein (Fragment) n=1 Tax=Calyptomena viridis TaxID=135972 RepID=A0A851CVN4_CALVR) HSP 1 Score: 58.2 bits (139), Expect = 6.500e-5 Identity = 55/190 (28.95%), Postives = 81/190 (42.63%), Query Frame = 3
Query: 2595 HRNVIAGVAIYAGLHLACFNGSVSRT-------------RRELSLGVDVNALAPGEAGGASPLQLACSSGNDDVVRLLLAASADPNLRDRHGASALHYAAATGHEAAVARLLGAKGCAVDPVDACGRTPLHDACDGGSGGVPKSSLMRNASRSPSPPTLVRGDD-DRCG--------RENRVNIARLLFK 3098
HR+V+A + + G+ + NG R L G V+ L G+ +PL +AC+ N +V++ L+ A+P LR++ G + H A+ GH + LL D GRTPLH A G G VP + P + D DRCG + V+IARLL +
Sbjct: 52 HRDVLAFLLLELGMDVEVANGDYKRPIXXXXXXXXXXXXXXXLERGASVDCLKKGDW---TPLMMACTRKNLEVIQALVEHGANPLLRNKDGWNCFHIASREGHPEVLRYLLDVSPGIWDTESTTGRTPLHTA--GSEGFVPTFAFF--------PRCQYKADSRDRCGVTPFMDAIQNGHVDIARLLLE 228
BLAST of mRNA_F-serratus_M_contig79.19169.1 vs. uniprot
Match: A0A6H5IPC4_9HYME (Uncharacterized protein n=1 Tax=Trichogramma brassicae TaxID=86971 RepID=A0A6H5IPC4_9HYME) HSP 1 Score: 60.1 bits (144), Expect = 6.660e-5 Identity = 79/260 (30.38%), Postives = 105/260 (40.38%), Query Frame = 3
Query: 2634 LHLAC-FNGSVSRTRR-----ELSLGVDVNALAPGEAGGASPLQLACSSGNDDVVRLLLAASADPNLRDRHGASALHYAAATGHEAAVARLLGA-----KGCAVDPVDACGRTPLHDACDGGSGGVPKSSLMRNASRSPSPPTLVRGDDDR-----CGR-ENRVNIARLLFKAGADVGARIVIPSGGGVPAGTVSGAGNNYETAQPTRGRGRAFFSRETGAAEGMTPLHLACSAGRVELASYLIRNGACVSVKDKGGCLP 3362
LH+ C NG+V ++ EL L V ++A + G++PL LA S GN+++V LL ADP L + G + LHY A V R A +D D+ G TPL A GG L+R + P+L D C R ENRV + RL F+ + R G V N EG TPLHLA S G EL +L+R GA + + G P
Sbjct: 300 LHVICPRNGNVGLSKLFELNDELQLRVPIDAR---DNEGSTPLHLATSCGNEELVERLLRRGADPTLANAEGRTPLHYVAERSR--GVERFFRAIEDTWHTVQIDARDSEGDTPLLLALKGGHDVQNVRGLLRRG----ADPSLANKDGKTPLHVICQRNENRV-LLRLFFEIWDAIENR-----------GQVDARDN-----------------------EGSTPLHLATSRGNAELVEWLLRRGANPCLANAKGLTP 515 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig79.19169.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig79.19169.1 >prot_F-serratus_M_contig79.19169.1 ID=prot_F-serratus_M_contig79.19169.1|Name=mRNA_F-serratus_M_contig79.19169.1|organism=Fucus serratus male|type=polypeptide|length=1338bp MCRAVADPRPKRHKSRSPEGEVFDSISGSRTSSRYGHRLREDGGGRQPEGback to top mRNA from alignment at F-serratus_M_contig79:645749..687301- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig79.19169.1 ID=mRNA_F-serratus_M_contig79.19169.1|Name=mRNA_F-serratus_M_contig79.19169.1|organism=Fucus serratus male|type=mRNA|length=41553bp|location=Sequence derived from alignment at F-serratus_M_contig79:645749..687301- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig79:645749..687301- >mRNA_F-serratus_M_contig79.19169.1 ID=mRNA_F-serratus_M_contig79.19169.1|Name=mRNA_F-serratus_M_contig79.19169.1|organism=Fucus serratus male|type=CDS|length=8028bp|location=Sequence derived from alignment at F-serratus_M_contig79:645749..687301- (Fucus serratus male)back to top |